void ZDvidTile::update(int z)
{
if (m_z != z || m_image == NULL) {
#if defined(_ENABLE_LIBDVIDCPP_2)
std::vector<int> offset(3);
offset[0] = m_ix;
offset[1] = m_iy;
offset[2] = z;
tic();
try {
libdvid::DVIDNodeService service(getDvidTarget().getAddressWithPort(),
getDvidTarget().getUuid());
libdvid::BinaryDataPtr data =
service.get_tile_slice_binary(
"tiles", libdvid::XY, m_res.getLevel(), offset);
if (data->length() > 0) {
loadDvidSlice(data->get_raw(), data->length(), z);
m_image->setScale(1.0 / m_res.getScale(), 1.0 / m_res.getScale());
m_image->setOffset(-getX(), -getY());
}
} catch (std::exception &e) {
std::cout << e.what() << std::endl;
}
std::cout << "Tile level: " << m_res.getLevel() << std::endl;
std::cout << "Tile reading time: " << toc() << std::endl;
#else
ZDvidUrl dvidUrl(getDvidTarget());
ZDvidBufferReader bufferReader;
/*
QFuture<void> result = QtConcurrent::run(
&bufferReader, &ZDvidBufferReader::read,
QString(dvidUrl.getTileUrl("graytiles", m_res.getLevel(), m_ix, m_iy, z).c_str()));
result.waitForFinished();
*/
tic();
bufferReader.read(
dvidUrl.getTileUrl(getDvidTarget().getMultiscale2dName(),
m_res.getLevel(), m_ix, m_iy, z).c_str());
QByteArray buffer = bufferReader.getBuffer();
std::cout << "Tile reading time: " << toc() << std::endl;
// ZDvidTileInfo tileInfo = readTileInfo("graytiles");
if (!buffer.isEmpty()) {
loadDvidSlice(buffer, z);
// m_image->setScale(1.0 / m_res.getScale(), 1.0 / m_res.getScale());
// m_image->setOffset(-getX(), -getY());
// setResolutionLevel(m_res.getLevel());
}
#endif
}
//m_z = z;
}
int ZSplitTaskUploadCommand::run(
const std::vector<std::string> &input, const std::string &/*output*/,
const ZJsonObject &config)
{
ZJsonObject dvidJson(config.value("dvid"));
if (dvidJson.isEmpty()) {
std::cerr << "No dvid server specified. Abort." << std::endl;
return 1;
}
if (input.empty()) {
std::cerr << "No input file specified. Abort." << std::endl;
return 1;
}
ZDvidTarget target;
target.loadJsonObject(dvidJson);
if (!target.isValid()) {
std::cerr << "No valide dvid server specified. Abort." << std::endl;
return 1;
}
if (target.getBodyLabelName().empty()) {
std::cerr << "No sparsevol data specified. Abort." << std::endl;
return 1;
}
ZJsonObject docJson;
docJson.load(input.front());
ZJsonArray rootObj(docJson.value("meshReview"));
if (rootObj.isEmpty()) {
std::cerr << "Unrecognized input format. Abort." << std::endl;
return 1;
}
ZDvidWriter *writer = ZGlobal::GetInstance().getDvidWriterFromUrl(
GET_FLYEM_CONFIG.getTaskServer());
if (writer == NULL) {
std::cerr << "Unable to Initialize the task server: "
<< GET_FLYEM_CONFIG.getTaskServer() << std::endl;
std::cerr << "Abort" << std::endl;
return 1;
} else {
std::cout << "Task server: " << writer->getDvidTarget().getSourceString()
<< std::endl;
}
ZDvidUrl dvidUrl(target);
std::cout << std::endl;
std::cout << "Uploading tasks: " << std::endl << std::endl;
int count = 0;
for (size_t i = 0; i < rootObj.size(); ++i) {
ZJsonObject obj(rootObj.value(i));
ZJsonArray markerJson(obj.value("pointMarkers"));
#ifdef _DEBUG_2
std::cout << "Here";
#endif
if (!markerJson.isEmpty()) {
uint64_t bodyId =
ZString(obj.value("file").toString()).firstUint64();
if (bodyId > 0) {
ZJsonObject taskJson;
ZFlyEmMisc::SetSplitTaskSignalUrl(taskJson, bodyId, target);
for (size_t i = 0; i < markerJson.size(); ++i) {
ZJsonObject markerObj(markerJson.value(i));
ZStroke2d stroke =
ZFlyEmMisc::SyGlassSeedToStroke(markerObj);
ZFlyEmMisc::AddSplitTaskSeed(taskJson, stroke);
}
std::string location = writer->writeServiceTask("split", taskJson);
ZJsonObject entryJson;
entryJson.setEntry(neutube::json::REF_KEY, location);
QString taskKey = dvidUrl.getSplitTaskKey(bodyId).c_str();
writer->writeSplitTask(taskKey, taskJson);
std::cout << "* Task for " << bodyId << " is saved @ "
<< taskKey.toStdString() << "->" << location << std::endl;
++count;
}
}
}
std::cout << std::endl;
std::cout << count << " tasks uploaded." << std::endl;
return 0;
}
