void test_measure( ert_test_context_type * test_context ) {
enkf_main_type * enkf_main = ert_test_context_get_main( test_context );
enkf_fs_type * fs = enkf_main_get_fs( enkf_main );
enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main );
obs_vector_type * rft_obs = enkf_obs_get_vector( enkf_obs , "RFT_TEST");
int_vector_type * ens_active_list = int_vector_alloc(0,0);
active_list_type * active_list = active_list_alloc( );
meas_data_type * meas_data_RFT;
for (int i=0; i < enkf_main_get_ensemble_size( enkf_main ); i++)
int_vector_append( ens_active_list , i );
{
bool_vector_type * ens_mask;
ens_mask = int_vector_alloc_mask( ens_active_list );
meas_data_RFT = meas_data_alloc( ens_mask );
bool_vector_free( ens_mask );
}
obs_vector_measure( rft_obs , fs , 20 , ens_active_list , meas_data_RFT , active_list );
int_vector_free( ens_active_list );
active_list_free( active_list );
meas_data_free( meas_data_RFT );
}
void * enkf_main_std_scale_correlated_obs_JOB(void * self, const stringlist_type * args) {
if (stringlist_get_size(args) > 0) {
enkf_main_type * enkf_main = enkf_main_safe_cast( self );
int ensemble_size = enkf_main_get_ensemble_size(enkf_main);
enkf_fs_type * fs = enkf_main_get_fs( enkf_main );
enkf_obs_type * obs = enkf_main_get_obs( enkf_main );
int_vector_type * realizations = int_vector_alloc(1, 0);
local_obsdata_type * obsdata = local_obsdata_alloc( "OBS-JOB" );
int_vector_init_range(realizations, 0, ensemble_size, 1);
for (int iarg = 0; iarg < stringlist_get_size(args); iarg++) {
const char * arg_key = stringlist_iget( args , iarg );
stringlist_type * key_list = enkf_obs_alloc_matching_keylist(obs, arg_key);
for (int iobs=0; iobs < stringlist_get_size( key_list ); iobs++) {
const char * obs_key = stringlist_iget( key_list , iobs);
const obs_vector_type * obs_vector = enkf_obs_get_vector(obs, obs_key);
local_obsdata_add_node( obsdata , obs_vector_alloc_local_node(obs_vector) );
}
stringlist_free( key_list );
}
if (local_obsdata_get_size(obsdata) > 0)
enkf_obs_scale_correlated_std(obs, fs, realizations, obsdata );
local_obsdata_free( obsdata );
}
return NULL;
}
int enkf_config_node_load_obs( const enkf_config_node_type * config_node , enkf_obs_type * enkf_obs ,const char * key_index , int obs_count , time_t * _sim_time , double * _y , double * _std) {
ert_impl_type impl_type = enkf_config_node_get_impl_type(config_node);
int num_obs = 0;
int iobs;
for (iobs = 0; iobs < stringlist_get_size( config_node->obs_keys ); iobs++) {
obs_vector_type * obs_vector = enkf_obs_get_vector( enkf_obs , stringlist_iget( config_node->obs_keys , iobs));
int report_step = -1;
while (true) {
report_step = obs_vector_get_next_active_step( obs_vector , report_step);
if (report_step == -1) break;
{
bool valid;
double value , std1;
/**
The user index used when calling the user_get function on the
gen_obs data type is different depending on whether is called with a
data context user_key (as here) or with a observation context
user_key (as when plotting an observation plot). See more
documentation of the function gen_obs_user_get_data_index().
*/
if (impl_type == GEN_DATA)
gen_obs_user_get_with_data_index( obs_vector_iget_node( obs_vector , report_step ) , key_index , &value , &std1 , &valid);
else
obs_vector_user_get( obs_vector , key_index , report_step , &value , &std1 , &valid);
if (valid) {
if (obs_count > 0) {
_sim_time[num_obs] = enkf_obs_iget_obs_time( enkf_obs , report_step );
_y[num_obs] = value;
_std[num_obs] = std1;
}
num_obs++;
}
}
}
}
/* Sorting the observations in time order. */
if (obs_count > 0) {
double_vector_type * y = double_vector_alloc_shared_wrapper( 0 , 0 , _y , obs_count );
double_vector_type * std = double_vector_alloc_shared_wrapper( 0 , 0 , _std , obs_count );
time_t_vector_type * sim_time = time_t_vector_alloc_shared_wrapper( 0 , 0 , _sim_time , obs_count );
int * sort_perm = time_t_vector_alloc_sort_perm( sim_time );
time_t_vector_permute( sim_time , sort_perm );
double_vector_permute( y , sort_perm );
double_vector_permute( std , sort_perm );
free( sort_perm );
double_vector_free( y );
double_vector_free( std );
time_t_vector_free( sim_time );
}
return num_obs;
}
void test_invalid_obs_vector( enkf_main_type * enkf_main , const char * obs_key) {
enkf_fs_type * fs = enkf_main_get_fs(enkf_main);
enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main );
obs_vector_type * obs_vector = enkf_obs_get_vector( enkf_obs , obs_key );
bool_vector_type * active_mask = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true);
test_assert_false( obs_vector_has_data( obs_vector , active_mask , fs ));
bool_vector_free( active_mask );
}
void misfit_ensemble_initialize( misfit_ensemble_type * misfit_ensemble ,
const ensemble_config_type * ensemble_config ,
const enkf_obs_type * enkf_obs ,
enkf_fs_type * fs ,
int ens_size ,
int history_length,
bool force_init) {
if (force_init || !misfit_ensemble->initialized) {
misfit_ensemble_clear( misfit_ensemble );
msg_type * msg = msg_alloc("Evaluating misfit for observation: " , false);
double ** chi2_work = __2d_malloc( history_length + 1 , ens_size );
bool_vector_type * iens_valid = bool_vector_alloc( ens_size , true );
hash_iter_type * obs_iter = enkf_obs_alloc_iter( enkf_obs );
const char * obs_key = hash_iter_get_next_key( obs_iter );
misfit_ensemble->history_length = history_length;
misfit_ensemble_set_ens_size( misfit_ensemble , ens_size );
msg_show( msg );
while (obs_key != NULL) {
obs_vector_type * obs_vector = enkf_obs_get_vector( enkf_obs , obs_key );
msg_update( msg , obs_key );
bool_vector_reset( iens_valid );
bool_vector_iset( iens_valid , ens_size - 1 , true );
obs_vector_ensemble_chi2( obs_vector ,
fs ,
iens_valid ,
0 ,
misfit_ensemble->history_length,
0 ,
ens_size ,
chi2_work);
/**
Internalizing the results from the chi2_work table into the misfit structure.
*/
for (int iens = 0; iens < ens_size; iens++) {
misfit_member_type * node = misfit_ensemble_iget_member( misfit_ensemble , iens );
if (bool_vector_iget( iens_valid , iens))
misfit_member_update( node , obs_key , misfit_ensemble->history_length , iens , (const double **) chi2_work);
}
obs_key = hash_iter_get_next_key( obs_iter );
}
bool_vector_free( iens_valid );
msg_free(msg , true );
hash_iter_free( obs_iter );
__2d_free( chi2_work , misfit_ensemble->history_length + 1);
misfit_ensemble->initialized = true;
}
}
void test_container( ert_test_context_type * test_context ) {
enkf_main_type * enkf_main = ert_test_context_get_main( test_context );
enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main );
obs_vector_type * rft_obs = enkf_obs_get_vector( enkf_obs , "RFT_TEST");
enkf_fs_type * fs = enkf_main_get_fs( enkf_main );
bool_vector_type * active_mask = bool_vector_alloc( enkf_main_get_ensemble_size( enkf_main ) , true );
test_assert_true( obs_vector_has_data( rft_obs , active_mask , fs ));
bool_vector_free( active_mask );
}
void test_iget(ert_test_context_type * test_context) {
enkf_main_type * enkf_main = ert_test_context_get_main( test_context );
enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main );
test_assert_int_equal( 32 , enkf_obs_get_size( enkf_obs ) );
for (int iobs = 0; iobs < enkf_obs_get_size( enkf_obs ); iobs++) {
obs_vector_type * vec1 = enkf_obs_iget_vector( enkf_obs , iobs );
obs_vector_type * vec2 = enkf_obs_get_vector( enkf_obs , obs_vector_get_key( vec1 ));
test_assert_ptr_equal( vec1 , vec2 );
}
}
void test_gendata( enkf_main_type * enkf_main , const char * obs_key , int report_step ) {
enkf_obs_type * enkf_obs = enkf_main_get_obs( enkf_main );
obs_vector_type * obs_vector = enkf_obs_get_vector( enkf_obs , obs_key);
{
enkf_plot_gendata_type * gen_data = enkf_plot_gendata_alloc_from_obs_vector( obs_vector );
enkf_fs_type * fs = enkf_main_get_fs( enkf_main );
gen_obs_type * gen_obs = obs_vector_iget_node( obs_vector , report_step );
{
double value;
double std;
bool valid;
gen_obs_user_get_with_data_index(gen_obs , "0" , &value , &std , &valid );
test_assert_double_equal( 0.143841 , value );
test_assert_double_equal( 0.0300 , std );
test_assert_true( valid );
}
enkf_plot_gendata_load(gen_data, fs, report_step, FORECAST, NULL);
test_assert_int_equal( enkf_main_get_ensemble_size( enkf_main ) , enkf_plot_gendata_get_size( gen_data ));
{
enkf_plot_genvector_type * vector = enkf_plot_gendata_iget( gen_data , 24);
test_assert_true( enkf_plot_genvector_is_instance( vector ));
test_assert_double_equal( 0.675537 , enkf_plot_genvector_iget( vector , 0 ));
test_assert_double_equal( 0.682635 , enkf_plot_genvector_iget( vector , 1 ));
test_assert_double_equal( 0.616371 , enkf_plot_genvector_iget( vector , 2 ));
}
{
enkf_plot_genvector_type * vector = enkf_plot_gendata_iget( gen_data , 9 );
test_assert_true( enkf_plot_genvector_is_instance( vector ));
test_assert_double_equal( -0.515033 , enkf_plot_genvector_iget( vector , 0 ));
test_assert_double_equal( -0.507350 , enkf_plot_genvector_iget( vector , 1 ));
test_assert_double_equal( -0.541030 , enkf_plot_genvector_iget( vector , 2 ));
}
enkf_plot_gendata_free( gen_data );
}
}