void write_to_exodus(int rank, int num_procs, char * out_file_name) /*****************************************************************************/ { int exo_access = EX_CLOBBER; int cpu_word_size = sizeof(double); int io_word_size = sizeof(float); int out_id; int i; int b; ex_init_params exinit; int error = 0; out_id = ex_create(out_file_name, exo_access, &cpu_word_size, &io_word_size); if (out_id < 0){ printf("error opening file"); } strncpy( exinit.title, mss.title, MAX_LINE_LENGTH-1 ); exinit.title[MAX_LINE_LENGTH-1] = 0; exinit.num_dim = mss.num_dim; exinit.num_nodes = mss.num_nodes; exinit.num_edge = 0; exinit.num_edge_blk = 0; exinit.num_face = 0; exinit.num_face_blk = 0; exinit.num_elem = mss.num_elem; exinit.num_elem_blk = mss.num_elem_blk; exinit.num_node_sets = mss.num_node_sets; exinit.num_edge_sets = 0; exinit.num_face_sets = 0; exinit.num_side_sets = mss.num_side_sets; exinit.num_elem_sets = 0; exinit.num_node_maps = 0; exinit.num_edge_maps = 0; exinit.num_face_maps = 0; exinit.num_elem_maps = 0; PERROR; if ( ex_put_init_ext(out_id, &exinit) < 0 ) ++error; PERROR; /*now write parallel global information*/ if ( ne_put_init_global( out_id, mss.num_nodes_global, mss.num_elems_global, mss.num_elm_blks_global, mss.num_node_sets_global, mss.num_side_sets_global ) < 0 ) ++error; PERROR; if ( ne_put_init_info( out_id, mss.num_total_proc, mss.num_proc_in_file, mss.type ) < 0 ) ++error; PERROR; if ( ne_put_eb_info_global(out_id,mss.elem_blk_ids_global,mss.elem_blk_cnts_global) < 0 ) ++error; PERROR; if ( mss.num_node_sets_global > 0 ) { if ( ne_put_ns_param_global( out_id, mss.ns_ids_global, mss.ns_cnts_global, mss.ns_df_cnts_global ) < 0 ) ++error; } PERROR; if ( mss.num_side_sets_global > 0 ) { if ( ne_put_ss_param_global( out_id, mss.ss_ids_global, mss.ss_cnts_global, mss.ss_df_cnts_global ) < 0 ) ++error; } PERROR; /*writingparallel info*/ if ( ne_put_loadbal_param( out_id, mss.num_internal_nodes, mss.num_border_nodes, mss.num_external_nodes, mss.num_internal_elems, mss.num_border_elems, mss.num_node_comm_maps, mss.num_elem_comm_maps, rank ) < 0 ) ++error; PERROR; if ( ne_put_cmap_params( out_id, mss.node_cmap_ids, (int*)mss.node_cmap_node_cnts, mss.elem_cmap_ids, (int*)mss.elem_cmap_elem_cnts, rank ) < 0 ) ++error; PERROR; if ( ne_put_elem_map( out_id, mss.internal_elements, mss.border_elements, rank ) < 0 ) ++error; PERROR; if ( ne_put_node_map( out_id, mss.internal_nodes, mss.border_nodes, mss.external_nodes, rank ) < 0 ) ++error; PERROR; for (i = 0; i < mss.num_node_comm_maps; i++) { if ( ne_put_node_cmap( out_id, mss.node_cmap_ids[i], mss.comm_node_ids[i], mss.comm_node_proc_ids[i], rank ) < 0 ) ++error; } PERROR; for (i = 0; i < mss.num_elem_comm_maps; i++) { if ( ne_put_elem_cmap( out_id, mss.elem_cmap_ids[i], mss.comm_elem_ids[i], mss.comm_side_ids[i], mss.comm_elem_proc_ids[i], rank ) < 0 ) ++error; } PERROR; /*coords*/ error += ex_put_coord(out_id, mss.coord, (mss.coord)+mss.num_nodes, (mss.coord)+2*mss.num_nodes); PERROR; error += ex_put_coord_names(out_id, mss.bptr); PERROR; /*map*/ error += ex_put_map(out_id, mss.element_order_map); PERROR; error += ex_put_elem_num_map(out_id, mss.global_element_numbers); PERROR; error += ex_put_node_num_map(out_id, mss.global_node_numbers); PERROR; /*block info*/ for(b = 0; b < mss.num_elem_blk; b++) { int gpe = 0; int fpe = 0; error += ex_put_block( out_id, EX_ELEM_BLOCK, mss.block_id[b], mss.element_types[b], mss.elements[b], mss.nodes_per_element[b], gpe, fpe, mss.element_attributes[b] ); /* num attr */ PERROR; } /* write element connectivity information */ for (b = 0; b < mss.num_elem_blk; b++) { if ( mss.elements[b] > 0 ){ error += ex_put_elem_conn(out_id,mss.block_id[b],mss.elmt_node_linkage[b]); PERROR; } } /* write in nodal boundary sets for the body. */ for(i = 0; i < mss.num_node_sets; i++) { error += ex_put_node_set_param(out_id, mss.node_set_id[i], mss.num_nodes_in_node_set[i], mss.num_df_in_node_set[i]); PERROR; if(mss.num_nodes_in_node_set[i]) error += ex_put_node_set(out_id, mss.node_set_id[i], mss.node_set_nodes[i]); PERROR; } for(i = 0; i < mss.num_side_sets; i++) { error += ex_put_side_set_param(out_id, mss.side_set_id[i], mss.num_elements_in_side_set[i], mss.num_df_in_side_set[i]); PERROR; if(mss.num_elements_in_side_set[i]) error += ex_put_side_set(out_id, mss.side_set_id[i], mss.side_set_elements[i], mss.side_set_faces[i]); PERROR; } error += ex_put_qa(out_id, mss.num_qa_records, mss.qaRecord); PERROR; ex_close(out_id); }
int main (int argc, char **argv) { int exoid, num_dim, num_nodes, num_elem, num_elem_blk; int num_elem_in_block[10], num_nodes_per_elem[10], num_attr[10]; int num_node_sets, num_side_sets, error; int i, j, k, m, *elem_map, *connect, *node_map; int node_list[100],elem_list[100],side_list[100]; int ebids[10], ids[10]; int num_nodes_per_set[10], num_elem_per_set[10]; int num_df_per_set[10]; int df_ind[10], node_ind[10], elem_ind[10]; int num_qa_rec, num_info; int num_glo_vars, num_nod_vars, num_ele_vars; int *truth_tab; int whole_time_step, num_time_steps; int CPU_word_size,IO_word_size; int prop_array[2]; float *glob_var_vals, *nodal_var_vals, *elem_var_vals; float time_value; float x[100], y[100], z[100], *dummy; float attrib[100], dist_fact[100]; char *coord_names[3], *qa_record[2][4], *info[3], *var_names[3]; char *prop_names[2]; ex_opts (EX_VERBOSE | EX_ABORT); dummy = 0; /* assign this so the Cray compiler doesn't complain */ /* Specify compute and i/o word size */ CPU_word_size = 0; /* float or double */ IO_word_size = 0; /* use system default (4 bytes) */ /* create EXODUS II file */ exoid = ex_create ("test.exo", /* filename path */ EX_CLOBBER, /* create mode */ &CPU_word_size, /* CPU float word size in bytes */ &IO_word_size); /* I/O float word size in bytes */ printf ("after ex_create for test.exo, exoid = %d\n", exoid); printf (" cpu word size: %d io word size: %d\n",CPU_word_size,IO_word_size); /* ncopts = NC_VERBOSE; */ /* initialize file with parameters */ num_dim = 3; num_nodes = 28; num_elem = 8; num_elem_blk = 7; num_node_sets = 2; num_side_sets = 5; /* num_side_sets = 6; Uncomment to test NULL side sets */ error = ex_put_init (exoid, "This is testwt1", num_dim, num_nodes, num_elem, num_elem_blk, num_node_sets, num_side_sets); printf ("after ex_put_init, error = %d\n", error); /* write nodal coordinates values and names to database */ /* Quad #1 */ x[0] = 0.0; y[0] = 0.0; z[0] = 0.0; x[1] = 1.0; y[1] = 0.0; z[1] = 0.0; x[2] = 1.0; y[2] = 1.0; z[2] = 0.0; x[3] = 0.0; y[3] = 1.0; z[3] = 0.0; /* Quad #2 */ x[4] = 1.0; y[4] = 0.0; z[4] = 0.0; x[5] = 2.0; y[5] = 0.0; z[5] = 0.0; x[6] = 2.0; y[6] = 1.0; z[6] = 0.0; x[7] = 1.0; y[7] = 1.0; z[7] = 0.0; /* Hex #1 */ x[8] = 0.0; y[8] = 0.0; z[8] = 0.0; x[9] = 10.0; y[9] = 0.0; z[9] = 0.0; x[10] = 10.0; y[10] = 0.0; z[10] =-10.0; x[11] = 1.0; y[11] = 0.0; z[11] =-10.0; x[12] = 1.0; y[12] = 10.0; z[12] = 0.0; x[13] = 10.0; y[13] = 10.0; z[13] = 0.0; x[14] = 10.0; y[14] = 10.0; z[14] =-10.0; x[15] = 1.0; y[15] = 10.0; z[15] =-10.0; /* Tetra #1 */ x[16] = 0.0; y[16] = 0.0; z[16] = 0.0; x[17] = 1.0; y[17] = 0.0; z[17] = 5.0; x[18] = 10.0; y[18] = 0.0; z[18] = 2.0; x[19] = 7.0; y[19] = 5.0; z[19] = 3.0; /* Circle #1 */ x[20] = 100.0; y[20] = 100.0; z[20] = 0.0; /* Sphere #1 */ x[21] = 50.0; y[21] = 50.0; z[21] = 20.0; /* Wedge #1 */ x[22] = 3.0; y[22] = 0.0; z[22] = 6.0; x[23] = 6.0; y[23] = 0.0; z[23] = 0.0; x[24] = 0.0; y[24] = 0.0; z[24] = 0.0; x[25] = 3.0; y[25] = 2.0; z[25] = 6.0; x[26] = 6.0; y[26] = 2.0; z[26] = 2.0; x[27] = 0.0; y[27] = 2.0; z[27] = 0.0; error = ex_put_coord (exoid, x, y, z); printf ("after ex_put_coord, error = %d\n", error); coord_names[0] = "xcoor"; coord_names[1] = "ycoor"; coord_names[2] = "zcoor"; error = ex_put_coord_names (exoid, coord_names); printf ("after ex_put_coord_names, error = %d\n", error); /* write element order map */ elem_map = (int *) calloc(num_elem, sizeof(int)); for (i=1; i<=num_elem; i++) { elem_map[i-1] = i; } error = ex_put_map (exoid, elem_map); printf ("after ex_put_map, error = %d\n", error); free (elem_map); /* write element numbering map */ elem_map = (int *) calloc(num_elem, sizeof(int)); for (i=1; i<=num_elem; i++) { elem_map[i-1] = i*2; } error = ex_put_elem_num_map (exoid, elem_map); printf ("after ex_put_elem_num_map, error = %d\n", error); free (elem_map); /* write node numbering map */ node_map = (int *) calloc(num_nodes, sizeof(int)); for (i=1; i<=num_nodes; i++) { node_map[i-1] = i*3; } error = ex_put_node_num_map (exoid, node_map); printf ("after ex_put_node_num_map, error = %d\n", error); free (node_map); /* write element block parameters */ num_elem_in_block[0] = 1; /* element 1: Quad 1 */ num_elem_in_block[1] = 2; /* elements 2, 3: Quad 1 & 2 */ num_elem_in_block[2] = 1; /* element 4: Hex */ num_elem_in_block[3] = 1; /* element 5: Tetra */ num_elem_in_block[4] = 1; /* element 6: Circle */ num_elem_in_block[5] = 1; /* element 7: Sphere */ num_elem_in_block[6] = 1; /* element 8: Wedge */ num_nodes_per_elem[0] = 4; /* elements in block #1 are 4-node quads */ num_nodes_per_elem[1] = 4; /* elements in block #2 are 4-node quads */ num_nodes_per_elem[2] = 8; /* elements in block #3 are 8-node hexes */ num_nodes_per_elem[3] = 4; /* elements in block #3 are 4-node tetras */ num_nodes_per_elem[4] = 1; /* elements in block #4 are 1-node circles */ num_nodes_per_elem[5] = 1; /* elements in block #5 are 1-node spheres */ num_nodes_per_elem[6] = 6; /* elements in block #6 are 6-node wedges */ ebids[0] = 10; ebids[1] = 11; ebids[2] = 12; ebids[3] = 13; ebids[4] = 14; ebids[5] = 15; ebids[6] = 16; num_attr[0] = 3; num_attr[1] = 3; num_attr[2] = 3; num_attr[3] = 3; num_attr[4] = 3; num_attr[5] = 3; num_attr[6] = 3; error = ex_put_elem_block (exoid, ebids[0], "quad", num_elem_in_block[0], num_nodes_per_elem[0], num_attr[0]); printf ("after ex_put_elem_block, error = %d\n", error); error = ex_put_elem_block (exoid, ebids[1], "quad", num_elem_in_block[1], num_nodes_per_elem[1], num_attr[1]); printf ("after ex_put_elem_block, error = %d\n", error); error = ex_put_elem_block (exoid, ebids[2], "hex", num_elem_in_block[2], num_nodes_per_elem[2], num_attr[2]); printf ("after ex_put_elem_block, error = %d\n", error); error = ex_put_elem_block (exoid, ebids[3], "tetra", num_elem_in_block[3], num_nodes_per_elem[3], num_attr[3]); printf ("after ex_put_elem_block, error = %d\n", error); error = ex_put_elem_block (exoid, ebids[4], "circle", num_elem_in_block[4], num_nodes_per_elem[4], num_attr[4]); printf ("after ex_put_elem_block, error = %d\n", error); error = ex_put_elem_block (exoid, ebids[5], "sphere", num_elem_in_block[5], num_nodes_per_elem[5], num_attr[5]); printf ("after ex_put_elem_block, error = %d\n", error); error = ex_put_elem_block (exoid, ebids[6], "wedge", num_elem_in_block[6], num_nodes_per_elem[6], num_attr[6]); printf ("after ex_put_elem_block, error = %d\n", error); /* write element block properties */ prop_names[0] = "MATL"; prop_names[1] = "DENSITY"; error = ex_put_prop_names(exoid,EX_ELEM_BLOCK,2,prop_names); printf ("after ex_put_prop_names, error = %d\n", error); error = ex_put_prop(exoid, EX_ELEM_BLOCK, ebids[0], "MATL", 10); printf ("after ex_put_prop, error = %d\n", error); error = ex_put_prop(exoid, EX_ELEM_BLOCK, ebids[1], "MATL", 20); printf ("after ex_put_prop, error = %d\n", error); error = ex_put_prop(exoid, EX_ELEM_BLOCK, ebids[2], "MATL", 30); printf ("after ex_put_prop, error = %d\n", error); error = ex_put_prop(exoid, EX_ELEM_BLOCK, ebids[3], "MATL", 40); printf ("after ex_put_prop, error = %d\n", error); error = ex_put_prop(exoid, EX_ELEM_BLOCK, ebids[4], "MATL", 50); printf ("after ex_put_prop, error = %d\n", error); error = ex_put_prop(exoid, EX_ELEM_BLOCK, ebids[5], "MATL", 60); printf ("after ex_put_prop, error = %d\n", error); error = ex_put_prop(exoid, EX_ELEM_BLOCK, ebids[6], "MATL", 70); printf ("after ex_put_prop, error = %d\n", error); /* write element connectivity */ connect = (int *) calloc(8, sizeof(int)); connect[0] = 1; connect[1] = 2; connect[2] = 3; connect[3] = 4; error = ex_put_elem_conn (exoid, ebids[0], connect); printf ("after ex_put_elem_conn, error = %d\n", error); connect[0] = 1; connect[1] = 2; connect[2] = 3; connect[3] = 4; connect[4] = 5; connect[5] = 6; connect[6] = 7; connect[7] = 8; error = ex_put_elem_conn (exoid, ebids[1], connect); printf ("after ex_put_elem_conn, error = %d\n", error); connect[0] = 9; connect[1] = 10; connect[2] = 11; connect[3] = 12; connect[4] = 13; connect[5] = 14; connect[6] = 15; connect[7] = 16; error = ex_put_elem_conn (exoid, ebids[2], connect); printf ("after ex_put_elem_conn, error = %d\n", error); connect[0] = 17; connect[1] = 18; connect[2] = 19; connect[3] = 20; error = ex_put_elem_conn (exoid, ebids[3], connect); printf ("after ex_put_elem_conn, error = %d\n", error); connect[0] = 21; error = ex_put_elem_conn (exoid, ebids[4], connect); printf ("after ex_put_elem_conn, error = %d\n", error); connect[0] = 22; error = ex_put_elem_conn (exoid, ebids[5], connect); printf ("after ex_put_elem_conn, error = %d\n", error); connect[0] = 23; connect[1] = 24; connect[2] = 25; connect[3] = 26; connect[4] = 27; connect[5] = 28; error = ex_put_elem_conn (exoid, ebids[6], connect); printf ("after ex_put_elem_conn, error = %d\n", error); free (connect); /* write element block attributes (3 per block) */ attrib[0] = 1.0; attrib[1] = 2.0; attrib[2] = 3.0; attrib[3] = 1.11; attrib[4] = 2.11; attrib[5] = 3.11; attrib[6] = 1.12; attrib[7] = 2.12; attrib[8] = 3.12; attrib[9] = 1.2; attrib[10] = 2.2; attrib[11] = 3.2; attrib[12] = 1.3; attrib[13] = 2.3; attrib[14] = 3.3; attrib[15] = 1.4; attrib[16] = 2.4; attrib[17] = 3.4; attrib[18] = 1.5; attrib[19] = 2.5; attrib[20] = 3.5; attrib[21] = 1.6; attrib[22] = 2.6; attrib[23] = 3.6; error = ex_put_elem_attr (exoid, ebids[0], &attrib[0]); printf ("after ex_put_elem_attr, error = %d\n", error); error = ex_put_elem_attr (exoid, ebids[1], &attrib[3]); printf ("after ex_put_elem_attr, error = %d\n", error); error = ex_put_elem_attr (exoid, ebids[2], &attrib[9]); printf ("after ex_put_elem_attr, error = %d\n", error); error = ex_put_elem_attr (exoid, ebids[3], &attrib[12]); printf ("after ex_put_elem_attr, error = %d\n", error); error = ex_put_elem_attr (exoid, ebids[4], &attrib[15]); printf ("after ex_put_elem_attr, error = %d\n", error); error = ex_put_elem_attr (exoid, ebids[5], &attrib[18]); printf ("after ex_put_elem_attr, error = %d\n", error); error = ex_put_elem_attr (exoid, ebids[6], &attrib[21]); printf ("after ex_put_elem_attr, error = %d\n", error); /* write individual node sets */ /* COMMENTED OUT ... error = ex_put_node_set_param (exoid, 20, 5, 5); printf ("after ex_put_node_set_param, error = %d\n", error); node_list[0] = 100; node_list[1] = 101; node_list[2] = 102; node_list[3] = 103; node_list[4] = 104; dist_fact[0] = 1.0; dist_fact[1] = 2.0; dist_fact[2] = 3.0; dist_fact[3] = 4.0; dist_fact[4] = 5.0; error = ex_put_node_set (exoid, 20, node_list); printf ("after ex_put_node_set, error = %d\n", error); error = ex_put_node_set_dist_fact (exoid, 20, dist_fact); printf ("after ex_put_node_set_dist_fact, error = %d\n", error); error = ex_put_node_set_param (exoid, 21, 3, 3); printf ("after ex_put_node_set_param, error = %d\n", error); node_list[0] = 200; node_list[1] = 201; node_list[2] = 202; dist_fact[0] = 1.1; dist_fact[1] = 2.1; dist_fact[2] = 3.1; error = ex_put_node_set (exoid, 21, node_list); printf ("after ex_put_node_set, error = %d\n", error); error = ex_put_node_set_dist_fact (exoid, 21, dist_fact); printf ("after ex_put_node_set_dist_fact, error = %d\n", error); error = ex_put_prop(exoid, EX_NODE_SET, 20, "FACE", 4); printf ("after ex_put_prop, error = %d\n", error); error = ex_put_prop(exoid, EX_NODE_SET, 21, "FACE", 5); printf ("after ex_put_prop, error = %d\n", error); prop_array[0] = 1000; prop_array[1] = 2000; error = ex_put_prop_array(exoid, EX_NODE_SET, "VELOCITY", prop_array); printf ("after ex_put_prop_array, error = %d\n", error); END COMMENTED OUT SECTION */ /* write concatenated node sets; this produces the same information as * the above code which writes individual node sets */ /* THIS SECTION IS NOT COMMENTED OUT */ ids[0] = 20; ids[1] = 21; num_nodes_per_set[0] = 5; num_nodes_per_set[1] = 3; /* num_nodes_per_set[1] = 0; Uncomment to test NULL node sets */ node_ind[0] = 0; node_ind[1] = 5; node_list[0] = 100; node_list[1] = 101; node_list[2] = 102; node_list[3] = 103; node_list[4] = 104; node_list[5] = 200; node_list[6] = 201; node_list[7] = 202; num_df_per_set[0] = 5; num_df_per_set[1] = 3; df_ind[0] = 0; df_ind[1] = 5; dist_fact[0] = 1.0; dist_fact[1] = 2.0; dist_fact[2] = 3.0; dist_fact[3] = 4.0; dist_fact[4] = 5.0; dist_fact[5] = 1.1; dist_fact[6] = 2.1; dist_fact[7] = 3.1; error = ex_put_concat_node_sets (exoid, ids, num_nodes_per_set, num_df_per_set, node_ind, df_ind, node_list, dist_fact); printf ("after ex_put_concat_node_sets, error = %d\n", error); error = ex_put_prop(exoid, EX_NODE_SET, 20, "FACE", 4); printf ("after ex_put_prop, error = %d\n", error); error = ex_put_prop(exoid, EX_NODE_SET, 21, "FACE", 5); printf ("after ex_put_prop, error = %d\n", error); prop_array[0] = 1000; prop_array[1] = 2000; error = ex_put_prop_array(exoid, EX_NODE_SET, "VELOCITY", prop_array); printf ("after ex_put_prop_array, error = %d\n", error); /* END NOT COMMENTED OUT SECTION */ /* write individual side sets */ /* COMMENTED OUT SECTION ... error = ex_put_side_set_param (exoid, 30, 2, 4); printf ("after ex_put_side_set_param, error = %d\n", error); elem_list[0] = 1; elem_list[1] = 1; node_list[0] = 1; node_list[1] = 2; node_list[2] = 5; node_list[3] = 6; side_list[0] = 1; side_list[1] = 1; dist_fact[0] = 30.0; dist_fact[1] = 30.1; dist_fact[2] = 30.2; dist_fact[3] = 30.3; error = ex_put_side_set (exoid, 30, elem_list, side_list); printf ("after ex_put_side_set, error = %d\n", error); error = ex_put_side_set_dist_fact (exoid, 30, dist_fact); printf ("after ex_put_side_set_dist_fact, error = %d\n", error); error = ex_put_side_set_param (exoid, 31, 2, 4); printf ("after ex_put_side_set_param, error = %d\n", error); elem_list[0] = 2; elem_list[1] = 2; node_list[0] = 6; node_list[1] = 7; node_list[2] = 7; node_list[3] = 8; side_list[0] = 3; side_list[1] = 3; dist_fact[0] = 31.0; dist_fact[1] = 31.1; dist_fact[2] = 31.2; dist_fact[3] = 31.3; error = ex_put_side_set (exoid, 31, elem_list, side_list); printf ("after ex_put_side_set, error = %d\n", error); error = ex_put_side_set_dist_fact (exoid, 31, dist_fact); printf ("after ex_put_side_set_dist_fact, error = %d\n", error); error = ex_put_prop(exoid, EX_SIDE_SET, 30, "COLOR", 100); printf ("after ex_put_prop, error = %d\n", error); error = ex_put_prop(exoid, EX_SIDE_SET, 31, "COLOR", 101); printf ("after ex_put_prop, error = %d\n", error); END COMMENTED OUT SECTION */ /* write concatenated side sets; this produces the same information as * the above code which writes individual side sets */ /* THIS SECTION IS NOT COMMENTED OUT */ ids[0] = 30; ids[1] = 31; ids[2] = 32; ids[3] = 33; ids[4] = 34; ids[5] = 35; /* side set #1 - quad */ node_list[0] = 8; node_list[1] = 5; node_list[2] = 6; node_list[3] = 7; /* side set #2 - quad/hex, spanning 2 element types */ node_list[4] = 2; node_list[5] = 3; node_list[6] = 7; node_list[7] = 8; /* side set #3 - hex */ node_list[8] = 9; node_list[9] = 12; node_list[10] = 11; node_list[11] = 10; node_list[12] = 11; node_list[13] = 12; node_list[14] = 16; node_list[15] = 15; node_list[16] = 16; node_list[17] = 15; node_list[18] = 11; node_list[19] = 12; node_list[20] = 10; node_list[21] = 11; node_list[22] = 15; node_list[23] = 14; node_list[24] = 13; node_list[25] = 16; node_list[26] = 12; node_list[27] = 9; node_list[28] = 14; node_list[29] = 13; node_list[30] = 9; node_list[31] = 10; node_list[32] = 16; node_list[33] = 13; node_list[34] = 14; node_list[35] = 15; /* side set #4 - tetras */ node_list[36] = 17; node_list[37] = 18; node_list[38] = 20; node_list[39] = 18; node_list[40] = 19; node_list[41] = 20; node_list[42] = 20; node_list[43] = 19; node_list[44] = 17; node_list[45] = 19; node_list[46] = 18; node_list[47] = 17; /* side set #5 - circle and sphere */ node_list[48] = 21; node_list[49] = 22; /* side set #6 - wedges */ node_list[50] = 27; node_list[51] = 26; node_list[52] = 23; node_list[53] = 24; node_list[54] = 28; node_list[55] = 27; node_list[56] = 24; node_list[57] = 25; node_list[58] = 28; node_list[59] = 25; node_list[60] = 23; node_list[61] = 26; node_list[62] = 25; node_list[63] = 24; node_list[64] = 23; node_list[65] = 26; node_list[66] = 27; node_list[67] = 28; node_ind[0] = 0; node_ind[1] = 4; node_ind[2] = 8; node_ind[3] = 36; node_ind[4] = 47; node_ind[5] = 49; num_elem_per_set[0] = 2; /* two sides uses 2 elements */ num_elem_per_set[1] = 2; num_elem_per_set[2] = 7; num_elem_per_set[3] = 4; num_elem_per_set[4] = 2; num_elem_per_set[5] = 5; /* num_elem_per_set[5] = 0; Uncomment to test NULL side sets */ num_nodes_per_set[0] = 4; num_nodes_per_set[1] = 4; num_nodes_per_set[2] = 28; num_nodes_per_set[3] = 12; num_nodes_per_set[4] = 2; num_nodes_per_set[5] = 18; elem_ind[0] = 0; elem_ind[1] = 2; elem_ind[2] = 4; elem_ind[3] = 11; elem_ind[4] = 15; elem_ind[5] = 17; elem_list[0] = 3; elem_list[1] = 3; /* side set 1: Quad #2 */ elem_list[2] = 1; elem_list[3] = 3; /* side set 2: Quad #1 & #2 */ elem_list[4] = 4; elem_list[5] = 4; /* side set 3: Hex */ elem_list[6] = 4; elem_list[7] = 4; elem_list[8] = 4; elem_list[9] = 4; elem_list[10] = 4; elem_list[11] = 5; elem_list[12] = 5; /* side set 4: Tetra */ elem_list[13] = 5; elem_list[14] = 5; elem_list[15] = 6; elem_list[16] = 7; /* side set 5: Circle & Sphere */ elem_list[17] = 8; elem_list[18] = 8; /* side set 6: Wedge */ elem_list[19] = 8; elem_list[20] = 8; elem_list[21] = 8; #if 0 /* side set 0 */ side_list[0]= 4; side_list[1]= 2; /* side set 1 */ side_list[2]= 2; side_list[3]= 3; /* side set 2 */ side_list[4]= 5; side_list[5]= 3; side_list[6]= 3; side_list[7]= 2; side_list[8]= 4; side_list[9]= 1; side_list[10]= 6; /* side set 3 */ side_list[11]= 1; side_list[12]= 2; side_list[13]= 3; side_list[14]= 4; /* side set 4 */ side_list[15] = 1; side_list[16] = 1; /* side set 5 */ side_list[17]= 1; side_list[18]= 2; side_list[19]= 3; side_list[20]= 4; side_list[21]= 5; #endif error = ex_cvt_nodes_to_sides(exoid, num_elem_per_set, num_nodes_per_set, elem_ind, node_ind, elem_list, node_list, side_list); printf ("after ex_cvt_nodes_to_sides, error = %d\n", error); #if 0 for (i=0;i<num_side_sets;i++) { printf("side set %d\n",i); for (j=0;j<num_elem_per_set[i];j++) printf(" side_list[%d]: %d\n",j,side_list[j+elem_ind[i]]); } #endif num_df_per_set[0] = 4; num_df_per_set[1] = 4; num_df_per_set[2] = 0; num_df_per_set[3] = 0; num_df_per_set[4] = 0; num_df_per_set[5] = 0; df_ind[0] = 0; df_ind[1] = 4; /* side set #1 df */ dist_fact[0] = 30.0; dist_fact[1] = 30.1; dist_fact[2] = 30.2; dist_fact[3] = 30.3; /* side set #2 df */ dist_fact[4] = 31.0; dist_fact[5] = 31.1; dist_fact[6] = 31.2; dist_fact[7] = 31.3; error = ex_put_concat_side_sets (exoid, ids, num_elem_per_set, num_df_per_set, elem_ind, df_ind, elem_list, side_list, dist_fact); printf ("after ex_put_concat_side_sets, error = %d\n", error); error = ex_put_prop(exoid, EX_SIDE_SET, 30, "COLOR", 100); printf ("after ex_put_prop, error = %d\n", error); error = ex_put_prop(exoid, EX_SIDE_SET, 31, "COLOR", 101); printf ("after ex_put_prop, error = %d\n", error); /* END COMMENTED OUT SECTION */ /* write QA records */ num_qa_rec = 2; qa_record[0][0] = "TESTWT1"; qa_record[0][1] = "testwt1"; qa_record[0][2] = "03/16/94"; qa_record[0][3] = "15:41:33"; qa_record[1][0] = "FASTQ"; qa_record[1][1] = "fastq"; qa_record[1][2] = "07/07/93"; qa_record[1][3] = "16:41:33"; error = ex_put_qa (exoid, num_qa_rec, qa_record); printf ("after ex_put_qa, error = %d\n", error); /* write information records */ num_info = 3; info[0] = "This is the first information record."; info[1] = "This is the second information record."; info[2] = "This is the third information record."; error = ex_put_info (exoid, num_info, info); printf ("after ex_put_info, error = %d\n", error); /* write results variables parameters and names */ num_glo_vars = 1; var_names[0] = "glo vars"; error = ex_put_var_param (exoid, "g", num_glo_vars); printf ("after ex_put_var_param, error = %d\n", error); error = ex_put_var_name(exoid, "g", 1, var_names[0]); printf ("after ex_put_var_name, error = %d\n", error); num_nod_vars = 2; var_names[0] = "nod_var0"; var_names[1] = "nod_var1"; error = ex_put_var_param (exoid, "n", num_nod_vars); printf ("after ex_put_var_param, error = %d\n", error); error = ex_put_var_names (exoid, "n", num_nod_vars, var_names); printf ("after ex_put_var_names, error = %d\n", error); num_ele_vars = 3; var_names[0] = "ele_var0"; var_names[1] = "ele_var1"; var_names[2] = "ele_var2"; error = ex_put_var_param (exoid, "e", num_ele_vars); printf ("after ex_put_var_param, error = %d\n", error); error = ex_put_var_names (exoid, "e", num_ele_vars, var_names); printf ("after ex_put_var_names, error = %d\n", error); /* write element variable truth table */ truth_tab = (int *) calloc ((num_elem_blk*num_ele_vars), sizeof(int)); k = 0; for (i=0; i<num_elem_blk; i++) { for (j=0; j<num_ele_vars; j++) { truth_tab[k] = k+1; k++; } } truth_tab[6] = 0; /* commented out to test ex_get_elem_var_tab in testrd1 error = ex_put_elem_var_tab (exoid, num_elem_blk, num_ele_vars, truth_tab); printf ("after ex_put_elem_var_tab, error = %d\n", error); */ free (truth_tab); /* for each time step, write the analysis results; * the code below fills the arrays glob_var_vals, * nodal_var_vals, and elem_var_vals with values for debugging purposes; * obviously the analysis code will populate these arrays */ whole_time_step = 1; num_time_steps = 10; glob_var_vals = (float *) calloc (num_glo_vars, CPU_word_size); nodal_var_vals = (float *) calloc (num_nodes, CPU_word_size); elem_var_vals = (float *) calloc (4, CPU_word_size); for (i=0; i<num_time_steps; i++) { time_value = (float)(i+1)/100.; /* write time value */ error = ex_put_time (exoid, whole_time_step, &time_value); printf ("after ex_put_time, error = %d\n", error); /* write global variables */ for (j=0; j<num_glo_vars; j++) { glob_var_vals[j] = (float)(j+2) * time_value; } error = ex_put_glob_vars (exoid, whole_time_step, num_glo_vars, glob_var_vals); printf ("after ex_put_glob_vars, error = %d\n", error); /* write nodal variables */ for (k=1; k<=num_nod_vars; k++) { for (j=0; j<num_nodes; j++) { nodal_var_vals[j] = (float)k + ((float)(j+1) * time_value); } error = ex_put_nodal_var (exoid, whole_time_step, k, num_nodes, nodal_var_vals); printf ("after ex_put_nodal_var, error = %d\n", error); } /* write element variables */ for (k=1; k<=num_ele_vars; k++) { for (j=0; j<num_elem_blk; j++) { for (m=0; m<num_elem_in_block[j]; m++) { elem_var_vals[m] = (float)(k+1) + (float)(j+2) + ((float)(m+1)*time_value); /* printf("elem_var_vals[%d]: %f\n",m,elem_var_vals[m]); */ } if (k == 1 && j == 2) continue; /* skip element block 3, variable 1 */ else { error = ex_put_elem_var (exoid, whole_time_step, k, ebids[j], num_elem_in_block[j], elem_var_vals); printf ("after ex_put_elem_var, error = %d\n", error); } } } whole_time_step++; /* update the data file; this should be done at the end of every time step * to ensure that no data is lost if the analysis dies */ error = ex_update (exoid); printf ("after ex_update, error = %d\n", error); } free(glob_var_vals); free(nodal_var_vals); free(elem_var_vals); /* close the EXODUS files */ error = ex_close (exoid); printf ("after ex_close, error = %d\n", error); return 0; }
void PeridigmNS::InterfaceData::InitializeExodusOutput(Teuchos::RCP<Epetra_Vector> exodusMeshElementConnectivity, Teuchos::RCP<Epetra_Vector> exodusMeshNodePositions){ if(comm->NumProc()>1){ filename << "Interfaces.e." << comm->NumProc() << "." << comm->MyPID(); } else{ filename << "Interfaces.e"; } std::string outputFileNameStr = filename.str(); std::vector<char> writable(outputFileNameStr.size() + 1); std::copy(outputFileNameStr.begin(), outputFileNameStr.end(), writable.begin()); int spaDim = 3; // force three dimensional output const int numShells = numOwnedPoints; const int numNodes = exodusMeshNodePositions->Map().NumMyElements(); int error_int; int CPU_word_size = 0; int IO_word_size = 0; /* create EXODUS II file */ const int output_exoid = ex_create (&writable[0],EX_CLOBBER,&CPU_word_size, &IO_word_size); exoid = output_exoid; // scan the connectivity to see if there are quads and tets: numQuads = 0; numTris = 0; for(int i=0;i<numOwnedPoints;++i){ if(interfaceNodesMap->ElementSize(i)==4) numQuads++; if(interfaceNodesMap->ElementSize(i)==3) numTris++; } TEUCHOS_TEST_FOR_EXCEPTION(numQuads+numTris!=numShells,std::logic_error,"numQuads " << numQuads << " + numTris " << numTris << " should sum up to numShells " << numShells); const int numBlocks = 2; error_int = ex_put_init(exoid, &writable[0], spaDim, numNodes, numShells, numBlocks, 0, 0); TEUCHOS_TEST_FOR_EXCEPTION(error_int,std::logic_error,"ex_put_init(): Failure"); // write initial coordinates and node/element maps float * x = new float[numNodes]; float * y = new float[numNodes]; float * z = new float[numNodes]; int * shellMap = new int[numShells]; int * nodeMap = new int[numNodes]; for(int i=0;i<numNodes;++i){ int nodeIndex = exodusMeshNodePositions->Map().FirstPointInElement(i); x[i] = (*exodusMeshNodePositions)[nodeIndex+0]; y[i] = (*exodusMeshNodePositions)[nodeIndex+1]; z[i] = (*exodusMeshNodePositions)[nodeIndex+2]; nodeMap[i] = exodusMeshNodePositions->Map().GID(i) + 1; // numbering is one based in exodus } for(int i=0;i<numShells;++i){ shellMap[i] = interfaceNodesMap->GID(i) +1; // numbering is one based in exodus } error_int = ex_put_coord(exoid, x, y, z); char * coord_names[3]; coord_names[0] = (char*) "coordinates_x"; coord_names[1] = (char*) "coordinates_y"; coord_names[2] = (char*) "coordinates_x"; error_int = ex_put_coord_names(exoid, coord_names); TEUCHOS_TEST_FOR_EXCEPTION(error_int,std::logic_error,"ex_put_coord_names(): Failure"); error_int = ex_put_elem_num_map(exoid, shellMap); TEUCHOS_TEST_FOR_EXCEPTION(error_int,std::logic_error,"ex_put_elem_num_map(): Failure"); error_int = ex_put_node_num_map(exoid, nodeMap); TEUCHOS_TEST_FOR_EXCEPTION(error_int,std::logic_error,"ex_put_node_num_map(): Failure"); delete[] shellMap; delete[] nodeMap; delete[] x; delete[] y; delete[] z; // write quad blocks: int blockIndex = 0; blockIndex ++; int num_nodes_per_elem_q4 = 4; const std::string elem_type_str_q4 = numQuads > 0 ? "QUAD4" : "NULL"; char * elem_type_q4 = const_cast<char *>(elem_type_str_q4.c_str()); const int numElemInBlock_q4 = numQuads; error_int = ex_put_elem_block(exoid, blockIndex, elem_type_q4, numElemInBlock_q4, num_nodes_per_elem_q4, 0); // no attributes put in output file TEUCHOS_TEST_FOR_EXCEPTION(error_int,std::logic_error,"ex_put_elem_block(): Failure"); blockIndex ++; int num_nodes_per_elem_t3 = 3; const std::string elem_type_str_t3 = numTris > 0 ? "TRI3": "NULL"; char * elem_type_t3 = const_cast<char *>(elem_type_str_t3.c_str()); const int numElemInBlock_t3 = numTris; error_int = ex_put_elem_block(exoid, blockIndex, elem_type_t3, numElemInBlock_t3, num_nodes_per_elem_t3, 0); // no attributes put in output file TEUCHOS_TEST_FOR_EXCEPTION(error_int,std::logic_error,"ex_put_elem_block(): Failure"); // write elem connectivities // HEADS UP: the connectivities will not write to file until ex_close is called // also note that the nodes must be the local node ids const int connLength = interfaceNodes->Map().NumMyElements(); blockIndex = 0; blockIndex ++; int conn_index = 0; int * block_connect_q4 = new int[numQuads*num_nodes_per_elem_q4]; for(int it=0;it<connLength;++it) { if(interfaceNodes->Map().ElementSize(it)!=4) continue; int elemIndex = interfaceNodes->Map().FirstPointInElement(it); for(int nn=0;nn<4;++nn){ int node = static_cast<int>( (*interfaceNodes)[elemIndex+nn] ); block_connect_q4[conn_index*num_nodes_per_elem_q4+nn] = exodusMeshNodePositions->Map().LID(node) + 1;// nodes are 1 based in exodus } conn_index++; } error_int = ex_put_elem_conn(exoid, blockIndex, block_connect_q4); delete[] block_connect_q4; blockIndex ++; conn_index = 0; int * block_connect_t3 = new int[numTris*num_nodes_per_elem_t3]; for(int it=0;it<connLength;++it) { if(interfaceNodes->Map().ElementSize(it)!=3) continue; int elemIndex = interfaceNodes->Map().FirstPointInElement(it); for(int nn=0;nn<3;++nn){ int node = static_cast<int>( (*interfaceNodes)[elemIndex+nn] ); block_connect_t3[conn_index*num_nodes_per_elem_t3+nn] = exodusMeshNodePositions->Map().LID(node) + 1;// nodes are 1 based in exodus } conn_index++; } error_int = ex_put_elem_conn(exoid, blockIndex, block_connect_t3); delete[] block_connect_t3; int numVariables = 1; // TODO careful with this, if more fields are added to the interface data this must be updated char** eleVarNames = new char*[numVariables]; std::vector<std::string> strNames; strNames.push_back("interface_aperture"); for (int i=0;i<numVariables;++i) eleVarNames[i] = (char*) (strNames[i].c_str()); error_int = ex_put_var_param(exoid, (char*) "e", numVariables); error_int = ex_put_var_names(exoid, (char*) "e", numVariables, &eleVarNames[0]); delete [] eleVarNames; // write the truth table int * truth_tab = new int[numVariables*numBlocks]; for(int i=0;i<numVariables*numBlocks;++i) truth_tab[i] = 1; error_int = ex_put_elem_var_tab (exoid, numBlocks, numVariables, truth_tab); delete [] truth_tab; error_int = ex_update(exoid); TEUCHOS_TEST_FOR_EXCEPTION(error_int,std::logic_error,"Exodus file close failed."); error_int = ex_close(exoid); TEUCHOS_TEST_FOR_EXCEPTION(error_int,std::logic_error,"Exodus file close failed."); }
int main (int argc, char **argv) { int num_glo_vars = 10; int num_nod_vars = 2; int CPU_word_size = 8; int IO_word_size = 8; const char* title = "This is a 2D mesh example with tri, quad, beam, truss, circle"; int ebids[] = {100, 200, 300, 400, 500}; int num_dim = 2; int num_nodes = 13; int num_elem = 20; int num_elem_blk = 5; int num_node_sets = 2; int num_side_sets = 2; /* create EXODUS II file */ int exoid = ex_create ("twod.e", /* filename path */ EX_CLOBBER, /* create mode */ &CPU_word_size, /* CPU float word size in bytes */ &IO_word_size); /* I/O float word size in bytes */ ex_opts(EX_VERBOSE); /* initialize file with parameters */ ex_put_init (exoid, title, num_dim, num_nodes, num_elem, num_elem_blk, num_node_sets, num_side_sets); /* write nodal coordinates values and names to database */ { double x[13], y[13]; x[0] = 0.0; y[0] = 0.0; x[1] = -0.5; y[1] = -0.5; x[2] = 0.5; y[2] = -0.5; x[3] = 0.5; y[3] = 0.5; x[4] = -0.5; y[4] = 0.5; x[5] = -1.0; y[5] = -1.0; x[6] = 1.0; y[6] = -1.0; x[7] = 1.0; y[7] = 1.0; x[8] = -1.0; y[8] = 1.0; x[9] = -2.0; y[9] = 0.0; x[10] = 0.0; y[10] = -2.0; x[11] = 2.0; y[11] = 0.0; x[12] = 0.0; y[12] = 2.0; ex_put_coord (exoid, x, y, 0); } { const char* coord_names[] = {"xcoor", "ycoor"}; ex_put_coord_names (exoid, (char**)coord_names); } { int node_map[] = {10,20,30,40,50,60,70,80,90,100,110,120,130}; ex_put_node_num_map(exoid, node_map); } /* write element order map */ { int elem_map[] = {11,21,31,41, 52, 62, 72, 82, 93,103,113,123,133,143,153,163, 174,184,194,204}; ex_put_elem_num_map (exoid, elem_map); } /* write element block parameters */ { const char* block_names[] = {"Triangles", "Quadrilaterals", "", "Trusses", "Circles"}; int num_elem_in_block[] = {4, 4, 4, 4, 4}; int num_nodes_per_elem[] = {3, 4, 2, 2, 1}; ex_put_elem_block (exoid, ebids[0], "triangle", num_elem_in_block[0], num_nodes_per_elem[0], 0); ex_put_elem_block (exoid, ebids[1], "quad", num_elem_in_block[1], num_nodes_per_elem[1], 0); ex_put_elem_block (exoid, ebids[2], "beam", num_elem_in_block[2], num_nodes_per_elem[2], 3); ex_put_elem_block (exoid, ebids[3], "truss", num_elem_in_block[3], num_nodes_per_elem[3], 1); ex_put_elem_block (exoid, ebids[4], "circle", num_elem_in_block[4], num_nodes_per_elem[4], 2); /* Write element block names */ ex_put_names(exoid, EX_ELEM_BLOCK, (char**)block_names); } /* write element connectivity */ { int conn_t[] = {2,3,1, 3,4,1, 4,5,1, 5,2,1}; int conn_q[] = {6,7,3,2, 7,8,4,3, 8,9,5,4, 9,6,2,5}; int conn_B[] = {11,7, 8,13, 13,9, 6,11}; int conn_T[] = {10,6, 9,10, 7,12, 12,8}; int conn_c[] = {6,7,8,9}; ex_put_elem_conn (exoid, ebids[0], conn_t); ex_put_elem_conn (exoid, ebids[1], conn_q); ex_put_elem_conn (exoid, ebids[2], conn_B); ex_put_elem_conn (exoid, ebids[3], conn_T); ex_put_elem_conn (exoid, ebids[4], conn_c); } /* write element block attributes */ { const char* attn_T[] = {"Area"}; double attr_T[] = {1.0, 1.1, 1.2, 1.3}; const char* attn_B[] = {"A", "I", "J"}; double attr_B[] = {1.0, 100.0, 200.0, 1.1, 100.1, 200.1, 1.2, 100.2, 200.2, 1.3, 100.3, 200.3}; const char* attn_c[] = {"Radius", "A"}; double attr_c[] = {1.0, 3.14, 1.1, 4.14, 1.2, 5.14, 1.3, 6.14}; ex_put_elem_attr (exoid, ebids[2], attr_B); ex_put_elem_attr (exoid, ebids[3], attr_T); ex_put_elem_attr (exoid, ebids[4], attr_c); ex_put_elem_attr_names (exoid, ebids[2], (char**)attn_B); ex_put_elem_attr_names (exoid, ebids[3], (char**)attn_T); ex_put_elem_attr_names (exoid, ebids[4], (char**)attn_c); } /* write individual node sets */ { int num_nodes_in_nset[] = {5, 8}; int nsids[] = {20, 22}; int nod1[] = {5,4,3,2,1}; int nod2[] = {6,7,8,9,2,3,4,5}; const char* nset_names[] = {"Triangle_Nodes", "Quadrilateral_Nodes"}; ex_put_set_param (exoid, EX_NODE_SET, nsids[0], num_nodes_in_nset[0], 0); ex_put_set_param (exoid, EX_NODE_SET, nsids[1], num_nodes_in_nset[1], 0); ex_put_set (exoid, EX_NODE_SET, nsids[0], nod1, 0); ex_put_set (exoid, EX_NODE_SET, nsids[1], nod2, 0); ex_put_names(exoid, EX_NODE_SET, (char**)nset_names); } { /* write individual side sets */ int num_face_in_sset[] = {4,4}; int ssids[] = {100,200}; int ss1el[] = {1,2,3,4}; int ss1si[] = {1,1,1,1}; int ss2el[] = {5,7,6,8}; int ss2si[] = {1,1,1,1}; const char* sset_names[] = {"A", "B"}; ex_put_set_param (exoid, EX_SIDE_SET, ssids[0], num_face_in_sset[0], 0); ex_put_set_param (exoid, EX_SIDE_SET, ssids[1], num_face_in_sset[1], 0); ex_put_set (exoid, EX_SIDE_SET, ssids[0], ss1el, ss1si); ex_put_set (exoid, EX_SIDE_SET, ssids[1], ss2el, ss2si); ex_put_names(exoid, EX_SIDE_SET, (char**)sset_names); } /* write results variables parameters and names */ { const char* gvarn[] = {"g_01", "g_02", "g_03", "g_04", "g_05", "g_06", "g_07", "g_08", "g_09", "g_10"}; ex_put_variable_param (exoid, EX_GLOBAL, num_glo_vars); ex_put_variable_names (exoid, EX_GLOBAL, num_glo_vars, (char**)gvarn); } { const char* nvarn[] = {"disp_x", "disp_y"}; ex_put_variable_param (exoid, EX_NODAL, num_nod_vars); ex_put_variable_names (exoid, EX_NODAL, num_nod_vars, (char**)nvarn); } #if 0 num_ele_vars = 3; /* 0 1 2 3 */ /* 12345678901234567890123456789012 */ var_names[0] = "this_variable_name_is_short"; var_names[1] = "this_variable_name_is_just_right"; var_names[2] = "this_variable_name_is_tooooo_long"; ex_put_var_param (exoid, "e", num_ele_vars); printf ("after ex_put_var_param, %d\n", error); if (error) { ex_close (exoid); exit(-1); } ex_put_var_names (exoid, "e", num_ele_vars, var_names); printf ("after ex_put_var_names, %d\n", error); if (error) { ex_close (exoid); exit(-1); } { num_nset_vars = 3; var_names[0] = "ns_var0"; var_names[1] = "ns_var1"; var_names[2] = "ns_var2"; ex_put_var_param (exoid, "m", num_nset_vars); printf ("after ex_put_var_param, %d\n", error); if (error) { ex_close (exoid); exit(-1); } ex_put_var_names (exoid, "m", num_nset_vars, var_names); printf ("after ex_put_var_names, %d\n", error); if (error) { ex_close (exoid); exit(-1); } } { num_sset_vars = 3; var_names[0] = "ss_var0"; var_names[1] = "ss_var1"; var_names[2] = "ss_var2"; ex_put_var_param (exoid, "s", num_sset_vars); printf ("after ex_put_var_param, %d\n", error); if (error) { ex_close (exoid); exit(-1); } ex_put_var_names (exoid, "s", num_sset_vars, var_names); printf ("after ex_put_var_names, %d\n", error); if (error) { ex_close (exoid); exit(-1); } } #endif /* for each time step, write the analysis results; * the code below fills the arrays glob_var_vals, * nodal_var_vals, and elem_var_vals with values for debugging purposes; * obviously the analysis code will populate these arrays */ { int i, j, k; int whole_time_step = 1; int num_time_steps = 10; double gvar[10]; double nvar[20]; for (i=0; i<num_time_steps; i++) { double time_value = (double)(i)/100.; ex_put_time (exoid, whole_time_step, &time_value); for (j=0; j<num_glo_vars; j++) { gvar[j] = (double)(j+2) * time_value; } ex_put_glob_vars (exoid, whole_time_step, num_glo_vars, gvar); /* write nodal variables */ for (k=0; k < num_nod_vars; k++) { for (j=0; j<num_nodes; j++) { nvar[j] = (double)k + ((double)(j+1) * time_value); } ex_put_nodal_var (exoid, whole_time_step, k+1, num_nodes, nvar); } #if 0 /* write element variables */ for (k=1; k<=num_ele_vars; k++) { for (j=0; j<num_elem_blk; j++) { for (m=0; m<num_elem_in_block[j]; m++) { elem_var_vals[m] = (float)(k+1) + (float)(j+2) + ((float)(m+1)*time_value); /* printf("elem_var_vals[%d]: %f\n",m,elem_var_vals[m]); */ } ex_put_elem_var (exoid, whole_time_step, k, ebids[j], num_elem_in_block[j], elem_var_vals); printf ("after ex_put_elem_var, %d\n", error); if (error) { ex_close (exoid); exit(-1); } } } /* write sideset variables */ for (k=1; k<=num_sset_vars; k++) { for (j=0; j<num_side_sets; j++) { for (m=0; m<num_face_in_sset[j]; m++) { sset_var_vals[m] = (float)(k+2) + (float)(j+3) + ((float)(m+1)*time_value); /* printf("sset_var_vals[%d]: %f\n",m,sset_var_vals[m]); */ } ex_put_sset_var (exoid, whole_time_step, k, ssids[j], num_face_in_sset[j], sset_var_vals); printf ("after ex_put_sset_var, %d\n", error); if (error) { ex_close (exoid); exit(-1); } } } /* write nodeset variables */ for (k=1; k<=num_nset_vars; k++) { for (j=0; j<num_node_sets; j++) { for (m=0; m<num_nodes_in_nset[j]; m++) { nset_var_vals[m] = (float)(k+3) + (float)(j+4) + ((float)(m+1)*time_value); /* printf("nset_var_vals[%d]: %f\n",m,nset_var_vals[m]); */ } ex_put_nset_var (exoid, whole_time_step, k, nsids[j], num_nodes_in_nset[j], nset_var_vals); printf ("after ex_put_nset_var, %d\n", error); if (error) { ex_close (exoid); exit(-1); } } } #endif whole_time_step++; } } ex_close (exoid); return 0; }
int main (int argc, char *argv[]){ char **str2,*line,*curr; const char* ext=".exo"; int i,j,k,n,n1,cpu_word_size,io_word_size,exo_file, num_axes,num_nodes,num_elements,num_blocks, num_side_sets,num_node_sets,num_time_steps, num_global_vars, num_nodal_vars,num_element_vars,*ids,*iscr, *nsssides,*nssdfac,*elem_list,*side_list, *nnsnodes,*nnsdfac,*node_list; double *scr,*x,*y,*z, *escr; char * blknames = NULL; int *num_elem_in_block = NULL; /* QA Info */ printf("%s: %s, %s\n", qainfo[0], qainfo[2], qainfo[1]); /* usage message*/ if(argc != 2){ printf("%s matlab_file_name.\n",argv[0]); printf(" the matlab_file_name is required\n"); printf("%d", argc); exit(1); } /*open input file*/ mat_file = Mat_Open(argv[1], MAT_ACC_RDONLY); if (mat_file == NULL) { printf("Error opening matlab file %s\n", argv[1]); return(1); } /*open output file*/ cpu_word_size=sizeof(double); io_word_size=sizeof(double); /* QA records */ ext=".exo"; line = (char *) calloc (2049,sizeof(char)); strcpy(line,argv[1]); strtok(line,"."); strcat(line,ext); exo_file = ex_create(line,EX_CLOBBER,&cpu_word_size,&io_word_size); if (exo_file < 0){ printf("error creating %s\n",line); exit(1); } /* print */ fprintf(stderr,"translating %s to %s ... ",argv[1],line); /* read database parameters */ matGetInt("naxes", 1, 1,&num_axes); matGetInt("nnodes", 1, 1,&num_nodes); matGetInt("nelems", 1, 1,&num_elements); matGetInt("nblks", 1, 1,&num_blocks); matGetInt("nnsets", 1, 1,&num_node_sets); matGetInt("nssets", 1, 1,&num_side_sets); matGetInt("nsteps", 1, 1,&num_time_steps); matGetInt("ngvars", 1, 1,&num_global_vars); matGetInt("nnvars", 1, 1,&num_nodal_vars); matGetInt("nevars", 1, 1,&num_element_vars); /*export parameters */ ex_put_init(exo_file,line, num_axes,num_nodes,num_elements,num_blocks, num_node_sets,num_side_sets); free(line); if ( num_global_vars > 0 ){ ex_put_variable_param(exo_file,EX_GLOBAL,num_global_vars); } if ( num_nodal_vars > 0 ){ ex_put_variable_param(exo_file,EX_NODAL,num_nodal_vars); } if ( num_element_vars > 0 ){ ex_put_variable_param(exo_file,EX_ELEM_BLOCK,num_element_vars); } /* nodal coordinates */ x = (double *) calloc(num_nodes,sizeof(double)); y = (double *) calloc(num_nodes,sizeof(double)); if (num_axes == 3) z = (double *) calloc(num_nodes,sizeof(double)); else z = NULL; matGetDbl("x0", num_nodes, 1, x); matGetDbl("y0", num_nodes, 1, y); if (num_axes == 3) matGetDbl("z0", num_nodes,1,z); ex_put_coord(exo_file,x,y,z); free(x); free(y); if (num_axes == 3){ free(z); } /* side sets (section by dgriffi) */ if(num_side_sets > 0){ /* ssids */ ids = (int *) calloc(num_side_sets,sizeof(int)); matGetInt("ssids",num_side_sets, 1,ids); /* nsssides */ nsssides = (int *) calloc(num_side_sets,sizeof(int)); matGetInt("nsssides",num_side_sets,1,nsssides); /* nssdfac */ nssdfac = (int *) calloc(num_side_sets,sizeof(int)); matGetInt("nssdfac",num_side_sets,1,nssdfac); for(i=0;i<num_side_sets;i++){ char name[32]; ex_put_set_param(exo_file,EX_SIDE_SET,ids[i],nsssides[i],nssdfac[i]); elem_list = (int *) calloc(nsssides[i],sizeof(int)); side_list = (int *) calloc(nsssides[i],sizeof(int)); escr = (double *) calloc(nssdfac[i],sizeof(double)); sprintf(name,"sselem%02d",i+1); matGetInt(name,nsssides[i],1,elem_list); sprintf(name,"ssside%02d",i+1); matGetInt(name,nsssides[i],1,side_list); ex_put_set(exo_file,EX_SIDE_SET,ids[i],elem_list,side_list); free(elem_list); free(side_list); sprintf(name,"ssfac%02d",i+1); matGetDbl(name,nssdfac[i],1,escr); ex_put_set_dist_fact(exo_file,EX_SIDE_SET,ids[i],escr); free(escr); } free(nsssides); free(nssdfac); free(ids); } /* node sets (section by dgriffi) */ if(num_node_sets > 0){ /* nsids */ ids = (int *) calloc(num_node_sets,sizeof(int)); matGetInt("nsids",num_node_sets, 1,ids); /* nnsnodes */ nnsnodes = (int *) calloc(num_node_sets,sizeof(int)); matGetInt("nnsnodes",num_node_sets,1,nnsnodes); /* nnsdfac */ nnsdfac = (int *) calloc(num_node_sets,sizeof(int)); matGetInt("nnsdfac",num_node_sets,1,nnsdfac); for(i=0;i<num_node_sets;i++){ char name[32]; ex_put_set_param(exo_file,EX_NODE_SET,ids[i],nnsnodes[i],nnsdfac[i]); node_list = (int *) calloc(nnsnodes[i],sizeof(int)); escr = (double *) calloc(nnsdfac[i],sizeof(double)); sprintf(name,"nsnod%02d",i+1); matGetInt(name,nnsnodes[i],1,node_list); ex_put_set(exo_file,EX_NODE_SET,ids[i],node_list,NULL); free(node_list); sprintf(name,"nsfac%02d",i+1); matGetDbl(name,nnsdfac[i],1,escr); ex_put_set_dist_fact(exo_file,EX_NODE_SET,ids[i],escr); free(escr); } free(nnsdfac); free(nnsnodes); free(ids); } /* element blocks */ /* get elem block ids */ ids = (int *) calloc(num_blocks,sizeof(int)); matGetInt("blkids",num_blocks,1,ids); /* get elem block types */ blknames = (char *) calloc(num_blocks*(MAX_STR_LENGTH+1),sizeof(char)); matGetStr("blknames",blknames); num_elem_in_block = (int *) calloc(num_blocks,sizeof(int)); curr = blknames; curr = strtok(curr,"\n"); for(i=0;i<num_blocks;i++){ char name[32]; sprintf(name,"blk%02d",i+1); n1 = matArrNRow(name); n = matArrNCol(name); iscr = (int *) calloc(n*n1,sizeof(int)); matGetInt(name,n1,n,iscr); num_elem_in_block[i]=n; ex_put_elem_block(exo_file,ids[i],curr,n,n1,0); ex_put_conn(exo_file,EX_ELEM_BLOCK,ids[i],iscr,NULL,NULL); free(iscr); curr = strtok(NULL, "\n"); } free(blknames); /* time values */ if (num_time_steps > 0 ) { scr = (double *) calloc(num_time_steps,sizeof(double)); matGetDbl( "time", num_time_steps, 1,scr); for (i=0;i<num_time_steps;i++){ ex_put_time(exo_file,i+1,&scr[i]); } free(scr); } /* global variables */ if (num_global_vars > 0 ){ int max_name_length = ex_inquire_int(exo_file, EX_INQ_DB_MAX_USED_NAME_LENGTH); char *str = (char *) calloc(num_global_vars * (max_name_length+1), sizeof(char)); matGetStr("gnames",str); str2 = (char **) calloc(num_global_vars,sizeof(char*)); curr = strtok(str,"\n"); for(i=0;i<num_global_vars;i++){ str2[i]=curr; curr = strtok(NULL,"\n"); } ex_put_variable_names(exo_file, EX_GLOBAL, num_global_vars, str2); free(str); free(str2); { double * global_var_vals; double * temp; global_var_vals = (double *) calloc(num_global_vars*num_time_steps,sizeof(double)); temp = (double *) calloc(num_time_steps,sizeof(double)); for (j=0;j<num_global_vars;j++) { char name[32]; sprintf(name,"gvar%02d",j+1); matGetDbl(name,num_time_steps,1,temp); for (i=0; i < num_time_steps; i++) { global_var_vals[num_global_vars*i+j]=temp[i]; } } for (i=0; i<num_time_steps; i++) { size_t offset = num_global_vars * i; ex_put_var(exo_file,i+1,EX_GLOBAL,1,0,num_global_vars,&global_var_vals[offset]); } free(temp); free(global_var_vals); } } /* nodal variables */ /* section by dtg */ if (num_nodal_vars > 0){ int max_name_length = ex_inquire_int(exo_file, EX_INQ_DB_MAX_USED_NAME_LENGTH); char *str = (char *) calloc(num_nodal_vars * (max_name_length+1), sizeof(char)); matGetStr("nnames",str); str2 = (char **) calloc(num_nodal_vars,sizeof(char*)); curr = strtok(str,"\n"); for(i=0;i<num_nodal_vars;i++){ str2[i]=curr; curr = strtok(NULL,"\n"); } ex_put_variable_names(exo_file, EX_NODAL, num_nodal_vars, str2); free(str); free(str2); { double * nodal_var_vals; for (i=0;i<num_nodal_vars;i++) { char name[32]; nodal_var_vals = (double *) calloc(num_nodes*num_time_steps,sizeof(double)); sprintf(name,"nvar%02d",i+1); matGetDbl(name,num_nodes,num_time_steps,nodal_var_vals); for (j=0;j<num_time_steps;j++) { ex_put_var(exo_file,j+1,EX_NODAL,i+1,num_nodes,1,nodal_var_vals+num_nodes*j); } free(nodal_var_vals); } } } /* elemental variables */ /* section by dtg */ if (num_element_vars > 0){ int max_name_length = ex_inquire_int(exo_file, EX_INQ_DB_MAX_USED_NAME_LENGTH); char *str = (char *) calloc(num_element_vars * (max_name_length+1), sizeof(char)); matGetStr("enames",str); str2 = (char **) calloc(num_element_vars,sizeof(char*)); curr = strtok(str,"\n"); for(i=0;i<num_element_vars;i++){ str2[i]=curr; curr = strtok(NULL,"\n"); } ex_put_variable_names(exo_file, EX_ELEM_BLOCK, num_element_vars, str2); free(str); free(str2); { double * element_var_vals; for (i=0;i<num_element_vars;i++) { char name[32]; element_var_vals = (double *) calloc(num_elements*num_time_steps,sizeof(double)); sprintf(name,"evar%02d",i+1); matGetDbl(name,num_elements,num_time_steps,element_var_vals); n=0; for (j=0;j<num_time_steps;j++) { for (k=0;k<num_blocks;k++) { ex_put_var(exo_file,j+1,EX_ELEM_BLOCK, i+1,ids[k],num_elem_in_block[k],element_var_vals+n); n=n+num_elem_in_block[k]; } } free(element_var_vals); } } } free(ids); /* node and element number maps */ ids = (int *) calloc (num_nodes,sizeof(int)); if ( !matGetInt("node_num_map",num_nodes,1,ids)){ ex_put_node_num_map(exo_file,ids); } free(ids); ids = (int *) calloc (num_elements,sizeof(int)); if ( !matGetInt("elem_num_map",num_elements,1,ids)){ ex_put_elem_num_map(exo_file,ids); } free(ids); free(num_elem_in_block); /* close exo file */ ex_close(exo_file); /* close mat file */ Mat_Close(mat_file); /* */ fprintf(stderr,"done.\n"); /* exit status */ add_to_log("mat2exo", 0); return(0); }