int HYPRE_StructMatrixSetBoxValues( HYPRE_StructMatrix matrix, int *ilower, int *iupper, int num_stencil_indices, int *stencil_indices, double *values ) { hypre_Index new_ilower; hypre_Index new_iupper; hypre_Box *new_value_box; int d; int ierr = 0; hypre_ClearIndex(new_ilower); hypre_ClearIndex(new_iupper); for (d = 0; d < hypre_StructGridDim(hypre_StructMatrixGrid(matrix)); d++) { hypre_IndexD(new_ilower, d) = ilower[d]; hypre_IndexD(new_iupper, d) = iupper[d]; } new_value_box = hypre_BoxCreate(); hypre_BoxSetExtents(new_value_box, new_ilower, new_iupper); ierr = hypre_StructMatrixSetBoxValues(matrix, new_value_box, num_stencil_indices, stencil_indices, values, 0); hypre_BoxDestroy(new_value_box); return (ierr); }
hypre_StructMatrix * hypre_StructMatrixCreate( MPI_Comm comm, hypre_StructGrid *grid, hypre_StructStencil *user_stencil ) { hypre_StructMatrix *matrix; int i; matrix = hypre_CTAlloc(hypre_StructMatrix, 1); hypre_StructMatrixComm(matrix) = comm; hypre_StructGridRef(grid, &hypre_StructMatrixGrid(matrix)); hypre_StructMatrixUserStencil(matrix) = hypre_StructStencilRef(user_stencil); hypre_StructMatrixDataAlloced(matrix) = 1; hypre_StructMatrixRefCount(matrix) = 1; /* set defaults */ hypre_StructMatrixSymmetric(matrix) = 0; for (i = 0; i < 6; i++) hypre_StructMatrixNumGhost(matrix)[i] = 0; return matrix; }
int hypre_StructMatrixDestroy( hypre_StructMatrix *matrix ) { int i; int ierr = 0; if (matrix) { hypre_StructMatrixRefCount(matrix) --; if (hypre_StructMatrixRefCount(matrix) == 0) { if (hypre_StructMatrixDataAlloced(matrix)) { hypre_SharedTFree(hypre_StructMatrixData(matrix)); } hypre_CommPkgDestroy(hypre_StructMatrixCommPkg(matrix)); hypre_ForBoxI(i, hypre_StructMatrixDataSpace(matrix)) hypre_TFree(hypre_StructMatrixDataIndices(matrix)[i]); hypre_TFree(hypre_StructMatrixDataIndices(matrix)); hypre_BoxArrayDestroy(hypre_StructMatrixDataSpace(matrix)); hypre_TFree(hypre_StructMatrixSymmElements(matrix)); hypre_StructStencilDestroy(hypre_StructMatrixUserStencil(matrix)); hypre_StructStencilDestroy(hypre_StructMatrixStencil(matrix)); hypre_StructGridDestroy(hypre_StructMatrixGrid(matrix)); hypre_TFree(matrix); } } return ierr; }
HYPRE_Int hypre_SMGResidualSetup( void *residual_vdata, hypre_StructMatrix *A, hypre_StructVector *x, hypre_StructVector *b, hypre_StructVector *r ) { HYPRE_Int ierr = 0; hypre_SMGResidualData *residual_data = residual_vdata; hypre_IndexRef base_index = (residual_data -> base_index); hypre_IndexRef base_stride = (residual_data -> base_stride); hypre_StructGrid *grid; hypre_StructStencil *stencil; hypre_BoxArray *base_points; hypre_ComputeInfo *compute_info; hypre_ComputePkg *compute_pkg; /*---------------------------------------------------------- * Set up base points and the compute package *----------------------------------------------------------*/ grid = hypre_StructMatrixGrid(A); stencil = hypre_StructMatrixStencil(A); base_points = hypre_BoxArrayDuplicate(hypre_StructGridBoxes(grid)); hypre_ProjectBoxArray(base_points, base_index, base_stride); hypre_CreateComputeInfo(grid, stencil, &compute_info); hypre_ComputeInfoProjectComp(compute_info, base_index, base_stride); hypre_ComputePkgCreate(compute_info, hypre_StructVectorDataSpace(x), 1, grid, &compute_pkg); /*---------------------------------------------------------- * Set up the residual data structure *----------------------------------------------------------*/ (residual_data -> A) = hypre_StructMatrixRef(A); (residual_data -> x) = hypre_StructVectorRef(x); (residual_data -> b) = hypre_StructVectorRef(b); (residual_data -> r) = hypre_StructVectorRef(r); (residual_data -> base_points) = base_points; (residual_data -> compute_pkg) = compute_pkg; /*----------------------------------------------------- * Compute flops *-----------------------------------------------------*/ (residual_data -> flops) = (hypre_StructMatrixGlobalSize(A) + hypre_StructVectorGlobalSize(x)) / (hypre_IndexX(base_stride) * hypre_IndexY(base_stride) * hypre_IndexZ(base_stride) ); return ierr; }
int HYPRE_StructMatrixGetGrid( HYPRE_StructMatrix matrix, HYPRE_StructGrid *grid ) { int ierr = 0; *grid = hypre_StructMatrixGrid(matrix); return ierr; }
int hypre_StructMatvecSetup( void *matvec_vdata, hypre_StructMatrix *A, hypre_StructVector *x ) { int ierr = 0; hypre_StructMatvecData *matvec_data = matvec_vdata; hypre_StructGrid *grid; hypre_StructStencil *stencil; hypre_BoxArrayArray *send_boxes; hypre_BoxArrayArray *recv_boxes; int **send_processes; int **recv_processes; hypre_BoxArrayArray *indt_boxes; hypre_BoxArrayArray *dept_boxes; hypre_Index unit_stride; hypre_ComputePkg *compute_pkg; /*---------------------------------------------------------- * Set up the compute package *----------------------------------------------------------*/ grid = hypre_StructMatrixGrid(A); stencil = hypre_StructMatrixStencil(A); hypre_CreateComputeInfo(grid, stencil, &send_boxes, &recv_boxes, &send_processes, &recv_processes, &indt_boxes, &dept_boxes); hypre_SetIndex(unit_stride, 1, 1, 1); hypre_ComputePkgCreate(send_boxes, recv_boxes, unit_stride, unit_stride, send_processes, recv_processes, indt_boxes, dept_boxes, unit_stride, grid, hypre_StructVectorDataSpace(x), 1, &compute_pkg); /*---------------------------------------------------------- * Set up the matvec data structure *----------------------------------------------------------*/ (matvec_data -> A) = hypre_StructMatrixRef(A); (matvec_data -> x) = hypre_StructVectorRef(x); (matvec_data -> compute_pkg) = compute_pkg; return ierr; }
int HYPRE_StructMatrixSetValues( HYPRE_StructMatrix matrix, int *grid_index, int num_stencil_indices, int *stencil_indices, double *values ) { hypre_Index new_grid_index; int d; int ierr = 0; hypre_ClearIndex(new_grid_index); for (d = 0; d < hypre_StructGridDim(hypre_StructMatrixGrid(matrix)); d++) { hypre_IndexD(new_grid_index, d) = grid_index[d]; } ierr = hypre_StructMatrixSetValues(matrix, new_grid_index, num_stencil_indices, stencil_indices, values, 0); return (ierr); }
int hypre_StructMatrixInitializeShell( hypre_StructMatrix *matrix ) { int ierr = 0; hypre_StructGrid *grid; hypre_StructStencil *user_stencil; hypre_StructStencil *stencil; hypre_Index *stencil_shape; int stencil_size; int num_values; int *symm_elements; int *num_ghost; int extra_ghost[] = {0, 0, 0, 0, 0, 0}; hypre_BoxArray *data_space; hypre_BoxArray *boxes; hypre_Box *box; hypre_Box *data_box; int **data_indices; int data_size; int data_box_volume; int i, j, d; grid = hypre_StructMatrixGrid(matrix); /*----------------------------------------------------------------------- * Set up stencil and num_values: * The stencil is a "symmetrized" version of the user's stencil * as computed by hypre_StructStencilSymmetrize. * * The `symm_elements' array is used to determine what data is * explicitely stored (symm_elements[i] < 0) and what data does is * not explicitely stored (symm_elements[i] >= 0), but is instead * stored as the transpose coefficient at a neighboring grid point. *-----------------------------------------------------------------------*/ if (hypre_StructMatrixStencil(matrix) == NULL) { user_stencil = hypre_StructMatrixUserStencil(matrix); hypre_StructStencilSymmetrize(user_stencil, &stencil, &symm_elements); stencil_shape = hypre_StructStencilShape(stencil); stencil_size = hypre_StructStencilSize(stencil); if (!hypre_StructMatrixSymmetric(matrix)) { /* store all element data */ for (i = 0; i < stencil_size; i++) symm_elements[i] = -1; num_values = stencil_size; } else { num_values = (stencil_size + 1) / 2; } hypre_StructMatrixStencil(matrix) = stencil; hypre_StructMatrixSymmElements(matrix) = symm_elements; hypre_StructMatrixNumValues(matrix) = num_values; } /*----------------------------------------------------------------------- * Set ghost-layer size for symmetric storage * - All stencil coeffs are to be available at each point in the * grid, as well as in the user-specified ghost layer. *-----------------------------------------------------------------------*/ num_ghost = hypre_StructMatrixNumGhost(matrix); stencil = hypre_StructMatrixStencil(matrix); stencil_shape = hypre_StructStencilShape(stencil); stencil_size = hypre_StructStencilSize(stencil); symm_elements = hypre_StructMatrixSymmElements(matrix); for (i = 0; i < stencil_size; i++) { if (symm_elements[i] >= 0) { for (d = 0; d < 3; d++) { extra_ghost[2*d] = hypre_max(extra_ghost[2*d], -hypre_IndexD(stencil_shape[i], d)); extra_ghost[2*d + 1] = hypre_max(extra_ghost[2*d + 1], hypre_IndexD(stencil_shape[i], d)); } } } for (d = 0; d < 3; d++) { num_ghost[2*d] += extra_ghost[2*d]; num_ghost[2*d + 1] += extra_ghost[2*d + 1]; } /*----------------------------------------------------------------------- * Set up data_space *-----------------------------------------------------------------------*/ if (hypre_StructMatrixDataSpace(matrix) == NULL) { boxes = hypre_StructGridBoxes(grid); data_space = hypre_BoxArrayCreate(hypre_BoxArraySize(boxes)); hypre_ForBoxI(i, boxes) { box = hypre_BoxArrayBox(boxes, i); data_box = hypre_BoxArrayBox(data_space, i); hypre_CopyBox(box, data_box); for (d = 0; d < 3; d++) { hypre_BoxIMinD(data_box, d) -= num_ghost[2*d]; hypre_BoxIMaxD(data_box, d) += num_ghost[2*d + 1]; } }
HYPRE_Int hypre_PFMGSetup( void *pfmg_vdata, hypre_StructMatrix *A, hypre_StructVector *b, hypre_StructVector *x ) { hypre_PFMGData *pfmg_data = pfmg_vdata; MPI_Comm comm = (pfmg_data -> comm); HYPRE_Int relax_type = (pfmg_data -> relax_type); HYPRE_Int usr_jacobi_weight= (pfmg_data -> usr_jacobi_weight); double jacobi_weight = (pfmg_data -> jacobi_weight); HYPRE_Int skip_relax = (pfmg_data -> skip_relax); double *dxyz = (pfmg_data -> dxyz); HYPRE_Int rap_type; HYPRE_Int max_iter; HYPRE_Int max_levels; HYPRE_Int num_levels; hypre_Index cindex; hypre_Index findex; hypre_Index stride; hypre_Index coarsen; HYPRE_Int *cdir_l; HYPRE_Int *active_l; hypre_StructGrid **grid_l; hypre_StructGrid **P_grid_l; double *data; HYPRE_Int data_size = 0; double *relax_weights; double *mean, *deviation; double alpha, beta; hypre_StructMatrix **A_l; hypre_StructMatrix **P_l; hypre_StructMatrix **RT_l; hypre_StructVector **b_l; hypre_StructVector **x_l; /* temp vectors */ hypre_StructVector **tx_l; hypre_StructVector **r_l; hypre_StructVector **e_l; void **relax_data_l; void **matvec_data_l; void **restrict_data_l; void **interp_data_l; hypre_StructGrid *grid; HYPRE_Int dim; hypre_Box *cbox; double min_dxyz; HYPRE_Int cdir, periodic, cmaxsize; HYPRE_Int d, l; HYPRE_Int dxyz_flag; HYPRE_Int b_num_ghost[] = {0, 0, 0, 0, 0, 0}; HYPRE_Int x_num_ghost[] = {1, 1, 1, 1, 1, 1}; HYPRE_Int ierr = 0; #if DEBUG char filename[255]; #endif /*----------------------------------------------------- * Set up coarse grids *-----------------------------------------------------*/ grid = hypre_StructMatrixGrid(A); dim = hypre_StructGridDim(grid); /* Compute a new max_levels value based on the grid */ cbox = hypre_BoxDuplicate(hypre_StructGridBoundingBox(grid)); max_levels = hypre_Log2(hypre_BoxSizeD(cbox, 0)) + 2 + hypre_Log2(hypre_BoxSizeD(cbox, 1)) + 2 + hypre_Log2(hypre_BoxSizeD(cbox, 2)) + 2; if ((pfmg_data -> max_levels) > 0) { max_levels = hypre_min(max_levels, (pfmg_data -> max_levels)); } (pfmg_data -> max_levels) = max_levels; /* compute dxyz */ if ((dxyz[0] == 0) || (dxyz[1] == 0) || (dxyz[2] == 0)) { mean = hypre_CTAlloc(double, 3); deviation = hypre_CTAlloc(double, 3); hypre_PFMGComputeDxyz(A, dxyz, mean, deviation); dxyz_flag= 0; for (d = 0; d < dim; d++) { deviation[d] -= mean[d]*mean[d]; /* square of coeff. of variation */ if (deviation[d]/(mean[d]*mean[d]) > .1) { dxyz_flag= 1; break; } } hypre_TFree(mean); hypre_TFree(deviation); }
HYPRE_Int hypre_PFMGBuildCoarseOp5( hypre_StructMatrix *A, hypre_StructMatrix *P, hypre_StructMatrix *R, HYPRE_Int cdir, hypre_Index cindex, hypre_Index cstride, hypre_StructMatrix *RAP ) { hypre_Index index; hypre_Index index_temp; hypre_StructGrid *fgrid; hypre_BoxArray *fgrid_boxes; hypre_Box *fgrid_box; HYPRE_Int *fgrid_ids; hypre_StructGrid *cgrid; hypre_BoxArray *cgrid_boxes; hypre_Box *cgrid_box; HYPRE_Int *cgrid_ids; hypre_IndexRef cstart, bfstart, stridef; hypre_Index fstart, bcstart, stridec; hypre_Index loop_size; HYPRE_Int constant_coefficient; HYPRE_Int fi, ci, fbi; HYPRE_Int loopi, loopj, loopk; hypre_Box *A_dbox; hypre_Box *P_dbox; hypre_Box *RAP_dbox; hypre_BoxArray *bdy_boxes, *tmp_boxes; hypre_Box *bdy_box, *fcbox; double *pb, *pa; double *a_cc, *a_cw, *a_ce, *a_cb, *a_ca; double *rap_cc, *rap_cw, *rap_ce; double *rap_cb, *rap_ca; double west, east; double center_int, center_bdy; HYPRE_Int iA, iAm1, iAp1; HYPRE_Int iAc; HYPRE_Int iP, iPm1, iPp1; HYPRE_Int OffsetA; HYPRE_Int OffsetP; stridef = cstride; hypre_SetIndex(stridec, 1, 1, 1); fgrid = hypre_StructMatrixGrid(A); fgrid_boxes = hypre_StructGridBoxes(fgrid); fgrid_ids = hypre_StructGridIDs(fgrid); cgrid = hypre_StructMatrixGrid(RAP); cgrid_boxes = hypre_StructGridBoxes(cgrid); cgrid_ids = hypre_StructGridIDs(cgrid); constant_coefficient = hypre_StructMatrixConstantCoefficient(RAP); hypre_assert( hypre_StructMatrixConstantCoefficient(A) == constant_coefficient ); if ( constant_coefficient==0 ) { hypre_assert( hypre_StructMatrixConstantCoefficient(R) == 0 ); hypre_assert( hypre_StructMatrixConstantCoefficient(P) == 0 ); } else /* 1 or 2 */ { hypre_assert( hypre_StructMatrixConstantCoefficient(R) == 1 ); hypre_assert( hypre_StructMatrixConstantCoefficient(P) == 1 ); } fcbox = hypre_BoxCreate(); bdy_boxes = hypre_BoxArrayCreate(0); tmp_boxes = hypre_BoxArrayCreate(0); fi = 0; hypre_ForBoxI(ci, cgrid_boxes) { while (fgrid_ids[fi] != cgrid_ids[ci]) { fi++; } cgrid_box = hypre_BoxArrayBox(cgrid_boxes, ci); fgrid_box = hypre_BoxArrayBox(fgrid_boxes, fi); cstart = hypre_BoxIMin(cgrid_box); hypre_StructMapCoarseToFine(cstart, cindex, cstride, fstart); A_dbox = hypre_BoxArrayBox(hypre_StructMatrixDataSpace(A), fi); P_dbox = hypre_BoxArrayBox(hypre_StructMatrixDataSpace(P), fi); RAP_dbox = hypre_BoxArrayBox(hypre_StructMatrixDataSpace(RAP), ci); /*----------------------------------------------------------------- * Extract pointers for interpolation operator: * pb is pointer for weight for f-point below c-point * pa is pointer for weight for f-point above c-point *-----------------------------------------------------------------*/ hypre_SetIndex(index_temp,0,-1,0); MapIndex(index_temp, cdir, index); pa = hypre_StructMatrixExtractPointerByIndex(P, fi, index); hypre_SetIndex(index_temp,0,1,0); MapIndex(index_temp, cdir, index); pb = hypre_StructMatrixExtractPointerByIndex(P, fi, index) - hypre_BoxOffsetDistance(P_dbox, index); /*----------------------------------------------------------------- * Extract pointers for 5-point fine grid operator: * * a_cc is pointer for center coefficient * a_cw is pointer for west coefficient * a_ce is pointer for east coefficient * a_cb is pointer for below coefficient * a_ca is pointer for above coefficient *-----------------------------------------------------------------*/ hypre_SetIndex(index_temp,0,0,0); MapIndex(index_temp, cdir, index); a_cc = hypre_StructMatrixExtractPointerByIndex(A, fi, index); hypre_SetIndex(index_temp,-1,0,0); MapIndex(index_temp, cdir, index); a_cw = hypre_StructMatrixExtractPointerByIndex(A, fi, index); hypre_SetIndex(index_temp,1,0,0); MapIndex(index_temp, cdir, index); a_ce = hypre_StructMatrixExtractPointerByIndex(A, fi, index); hypre_SetIndex(index_temp,0,-1,0); MapIndex(index_temp, cdir, index); a_cb = hypre_StructMatrixExtractPointerByIndex(A, fi, index); hypre_SetIndex(index_temp,0,1,0); MapIndex(index_temp, cdir, index); a_ca = hypre_StructMatrixExtractPointerByIndex(A, fi, index); /*----------------------------------------------------------------- * Extract pointers for coarse grid operator * rap_cc is pointer for center coefficient (etc.) *-----------------------------------------------------------------*/ hypre_SetIndex(index_temp,0,0,0); MapIndex(index_temp, cdir, index); rap_cc = hypre_StructMatrixExtractPointerByIndex(RAP, ci, index); hypre_SetIndex(index_temp,-1,0,0); MapIndex(index_temp, cdir, index); rap_cw = hypre_StructMatrixExtractPointerByIndex(RAP, ci, index); hypre_SetIndex(index_temp,1,0,0); MapIndex(index_temp, cdir, index); rap_ce = hypre_StructMatrixExtractPointerByIndex(RAP, ci, index); hypre_SetIndex(index_temp,0,-1,0); MapIndex(index_temp, cdir, index); rap_cb = hypre_StructMatrixExtractPointerByIndex(RAP, ci, index); hypre_SetIndex(index_temp,0,1,0); MapIndex(index_temp, cdir, index); rap_ca = hypre_StructMatrixExtractPointerByIndex(RAP, ci, index); /*----------------------------------------------------------------- * Define offsets for fine grid stencil and interpolation * * In the BoxLoop below I assume iA and iP refer to data associated * with the point which we are building the stencil for. The below * Offsets are used in refering to data associated with other points. *-----------------------------------------------------------------*/ hypre_SetIndex(index_temp,0,1,0); MapIndex(index_temp, cdir, index); OffsetP = hypre_BoxOffsetDistance(P_dbox,index); OffsetA = hypre_BoxOffsetDistance(A_dbox,index); /*-------------------------------------------------------------- * Loop for symmetric 5-point fine grid operator; produces a * symmetric 5-point coarse grid operator. *--------------------------------------------------------------*/ if ( constant_coefficient==0 ) { hypre_BoxGetSize(cgrid_box, loop_size); hypre_BoxLoop3Begin(loop_size, P_dbox, cstart, stridec, iP, A_dbox, fstart, stridef, iA, RAP_dbox, cstart, stridec, iAc); #define HYPRE_BOX_SMP_PRIVATE loopk,loopi,loopj,iP,iA,iAc,iAm1,iAp1,iPm1,iPp1,west,east #include "hypre_box_smp_forloop.h" hypre_BoxLoop3For(loopi, loopj, loopk, iP, iA, iAc) { iAm1 = iA - OffsetA; iAp1 = iA + OffsetA; iPm1 = iP - OffsetP; iPp1 = iP + OffsetP; rap_cb[iAc] = a_cb[iA] * pa[iPm1]; rap_ca[iAc] = a_ca[iA] * pb[iPp1]; west = a_cw[iA] + 0.5 * a_cw[iAm1] + 0.5 * a_cw[iAp1]; east = a_ce[iA] + 0.5 * a_ce[iAm1] + 0.5 * a_ce[iAp1]; /*----------------------------------------------------- * Prevent non-zero entries reaching off grid *-----------------------------------------------------*/ if(a_cw[iA] == 0.0) west = 0.0; if(a_ce[iA] == 0.0) east = 0.0; rap_cw[iAc] = west; rap_ce[iAc] = east; rap_cc[iAc] = a_cc[iA] + a_cw[iA] + a_ce[iA] + a_cb[iA] * pb[iP] + a_ca[iA] * pa[iP] - west - east; } hypre_BoxLoop3End(iP, iA, iAc); }
int hypre_StructMatvecCompute( void *matvec_vdata, double alpha, hypre_StructMatrix *A, hypre_StructVector *x, double beta, hypre_StructVector *y ) { int ierr = 0; hypre_StructMatvecData *matvec_data = matvec_vdata; hypre_ComputePkg *compute_pkg; hypre_CommHandle *comm_handle; hypre_BoxArrayArray *compute_box_aa; hypre_BoxArray *compute_box_a; hypre_Box *compute_box; hypre_Box *A_data_box; hypre_Box *x_data_box; hypre_Box *y_data_box; int Ai; int xi; int xoff0; int xoff1; int xoff2; int xoff3; int xoff4; int xoff5; int xoff6; int yi; double *Ap0; double *Ap1; double *Ap2; double *Ap3; double *Ap4; double *Ap5; double *Ap6; double *xp; double *yp; hypre_BoxArray *boxes; hypre_Box *box; hypre_Index loop_size; hypre_IndexRef start; hypre_IndexRef stride; hypre_StructStencil *stencil; hypre_Index *stencil_shape; int stencil_size; int depth; double temp; int compute_i, i, j, si; int loopi, loopj, loopk; /*----------------------------------------------------------------------- * Initialize some things *-----------------------------------------------------------------------*/ compute_pkg = (matvec_data -> compute_pkg); stride = hypre_ComputePkgStride(compute_pkg); /*----------------------------------------------------------------------- * Do (alpha == 0.0) computation *-----------------------------------------------------------------------*/ if (alpha == 0.0) { boxes = hypre_StructGridBoxes(hypre_StructMatrixGrid(A)); hypre_ForBoxI(i, boxes) { box = hypre_BoxArrayBox(boxes, i); start = hypre_BoxIMin(box); y_data_box = hypre_BoxArrayBox(hypre_StructVectorDataSpace(y), i); yp = hypre_StructVectorBoxData(y, i); hypre_BoxGetSize(box, loop_size); hypre_BoxLoop1Begin(loop_size, y_data_box, start, stride, yi); #define HYPRE_BOX_SMP_PRIVATE loopk,loopi,loopj,yi #include "hypre_box_smp_forloop.h" hypre_BoxLoop1For(loopi, loopj, loopk, yi) { yp[yi] *= beta; } hypre_BoxLoop1End(yi); }
int hypre_SMGResidualSetup( void *residual_vdata, hypre_StructMatrix *A, hypre_StructVector *x, hypre_StructVector *b, hypre_StructVector *r ) { int ierr = 0; hypre_SMGResidualData *residual_data = residual_vdata; hypre_IndexRef base_index = (residual_data -> base_index); hypre_IndexRef base_stride = (residual_data -> base_stride); hypre_Index unit_stride; hypre_StructGrid *grid; hypre_StructStencil *stencil; hypre_BoxArrayArray *send_boxes; hypre_BoxArrayArray *recv_boxes; int **send_processes; int **recv_processes; hypre_BoxArrayArray *indt_boxes; hypre_BoxArrayArray *dept_boxes; hypre_BoxArray *base_points; hypre_ComputePkg *compute_pkg; /*---------------------------------------------------------- * Set up base points and the compute package *----------------------------------------------------------*/ grid = hypre_StructMatrixGrid(A); stencil = hypre_StructMatrixStencil(A); hypre_SetIndex(unit_stride, 1, 1, 1); base_points = hypre_BoxArrayDuplicate(hypre_StructGridBoxes(grid)); hypre_ProjectBoxArray(base_points, base_index, base_stride); hypre_CreateComputeInfo(grid, stencil, &send_boxes, &recv_boxes, &send_processes, &recv_processes, &indt_boxes, &dept_boxes); hypre_ProjectBoxArrayArray(indt_boxes, base_index, base_stride); hypre_ProjectBoxArrayArray(dept_boxes, base_index, base_stride); hypre_ComputePkgCreate(send_boxes, recv_boxes, unit_stride, unit_stride, send_processes, recv_processes, indt_boxes, dept_boxes, base_stride, grid, hypre_StructVectorDataSpace(x), 1, &compute_pkg); /*---------------------------------------------------------- * Set up the residual data structure *----------------------------------------------------------*/ (residual_data -> A) = hypre_StructMatrixRef(A); (residual_data -> x) = hypre_StructVectorRef(x); (residual_data -> b) = hypre_StructVectorRef(b); (residual_data -> r) = hypre_StructVectorRef(r); (residual_data -> base_points) = base_points; (residual_data -> compute_pkg) = compute_pkg; /*----------------------------------------------------- * Compute flops *-----------------------------------------------------*/ (residual_data -> flops) = (hypre_StructMatrixGlobalSize(A) + hypre_StructVectorGlobalSize(x)) / (hypre_IndexX(base_stride) * hypre_IndexY(base_stride) * hypre_IndexZ(base_stride) ); return ierr; }
int hypre_PointRelaxSetup( void *relax_vdata, hypre_StructMatrix *A, hypre_StructVector *b, hypre_StructVector *x ) { hypre_PointRelaxData *relax_data = (hypre_PointRelaxData *)relax_vdata; int num_pointsets = (relax_data -> num_pointsets); int *pointset_sizes = (relax_data -> pointset_sizes); hypre_Index *pointset_strides = (relax_data -> pointset_strides); hypre_Index **pointset_indices = (relax_data -> pointset_indices); hypre_StructVector *t; int diag_rank; hypre_ComputePkg **compute_pkgs; hypre_Index unit_stride; hypre_Index diag_index; hypre_IndexRef stride; hypre_IndexRef index; hypre_StructGrid *grid; hypre_StructStencil *stencil; hypre_BoxArrayArray *send_boxes; hypre_BoxArrayArray *recv_boxes; int **send_processes; int **recv_processes; hypre_BoxArrayArray *indt_boxes; hypre_BoxArrayArray *dept_boxes; hypre_BoxArrayArray *orig_indt_boxes; hypre_BoxArrayArray *orig_dept_boxes; hypre_BoxArrayArray *box_aa; hypre_BoxArray *box_a; hypre_Box *box; int box_aa_size; int box_a_size; hypre_BoxArrayArray *new_box_aa; hypre_BoxArray *new_box_a; hypre_Box *new_box; double scale; int frac; int i, j, k, p, m, compute_i; int ierr = 0; /*---------------------------------------------------------- * Set up the temp vector *----------------------------------------------------------*/ if ((relax_data -> t) == NULL) { t = hypre_StructVectorCreate(hypre_StructVectorComm(b), hypre_StructVectorGrid(b)); hypre_StructVectorSetNumGhost(t, hypre_StructVectorNumGhost(b)); hypre_StructVectorInitialize(t); hypre_StructVectorAssemble(t); (relax_data -> t) = t; } /*---------------------------------------------------------- * Find the matrix diagonal *----------------------------------------------------------*/ grid = hypre_StructMatrixGrid(A); stencil = hypre_StructMatrixStencil(A); hypre_SetIndex(diag_index, 0, 0, 0); diag_rank = hypre_StructStencilElementRank(stencil, diag_index); /*---------------------------------------------------------- * Set up the compute packages *----------------------------------------------------------*/ hypre_SetIndex(unit_stride, 1, 1, 1); compute_pkgs = hypre_CTAlloc(hypre_ComputePkg *, num_pointsets); for (p = 0; p < num_pointsets; p++) { hypre_CreateComputeInfo(grid, stencil, &send_boxes, &recv_boxes, &send_processes, &recv_processes, &orig_indt_boxes, &orig_dept_boxes); stride = pointset_strides[p]; for (compute_i = 0; compute_i < 2; compute_i++) { switch(compute_i) { case 0: box_aa = orig_indt_boxes; break; case 1: box_aa = orig_dept_boxes; break; } box_aa_size = hypre_BoxArrayArraySize(box_aa); new_box_aa = hypre_BoxArrayArrayCreate(box_aa_size); for (i = 0; i < box_aa_size; i++) { box_a = hypre_BoxArrayArrayBoxArray(box_aa, i); box_a_size = hypre_BoxArraySize(box_a); new_box_a = hypre_BoxArrayArrayBoxArray(new_box_aa, i); hypre_BoxArraySetSize(new_box_a, box_a_size * pointset_sizes[p]); k = 0; for (m = 0; m < pointset_sizes[p]; m++) { index = pointset_indices[p][m]; for (j = 0; j < box_a_size; j++) { box = hypre_BoxArrayBox(box_a, j); new_box = hypre_BoxArrayBox(new_box_a, k); hypre_CopyBox(box, new_box); hypre_ProjectBox(new_box, index, stride); k++; } } } switch(compute_i) { case 0: indt_boxes = new_box_aa; break; case 1: dept_boxes = new_box_aa; break; } } hypre_ComputePkgCreate(send_boxes, recv_boxes, unit_stride, unit_stride, send_processes, recv_processes, indt_boxes, dept_boxes, stride, grid, hypre_StructVectorDataSpace(x), 1, &compute_pkgs[p]); hypre_BoxArrayArrayDestroy(orig_indt_boxes); hypre_BoxArrayArrayDestroy(orig_dept_boxes); } /*---------------------------------------------------------- * Set up the relax data structure *----------------------------------------------------------*/ (relax_data -> A) = hypre_StructMatrixRef(A); (relax_data -> x) = hypre_StructVectorRef(x); (relax_data -> b) = hypre_StructVectorRef(b); (relax_data -> diag_rank) = diag_rank; (relax_data -> compute_pkgs) = compute_pkgs; /*----------------------------------------------------- * Compute flops *-----------------------------------------------------*/ scale = 0.0; for (p = 0; p < num_pointsets; p++) { stride = pointset_strides[p]; frac = hypre_IndexX(stride); frac *= hypre_IndexY(stride); frac *= hypre_IndexZ(stride); scale += (pointset_sizes[p] / frac); } (relax_data -> flops) = scale * (hypre_StructMatrixGlobalSize(A) + hypre_StructVectorGlobalSize(x)); return ierr; }
HYPRE_Int HYPRE_StructDiagScale( HYPRE_StructSolver solver, HYPRE_StructMatrix HA, HYPRE_StructVector Hy, HYPRE_StructVector Hx ) { hypre_StructMatrix *A = (hypre_StructMatrix *) HA; hypre_StructVector *y = (hypre_StructVector *) Hy; hypre_StructVector *x = (hypre_StructVector *) Hx; hypre_BoxArray *boxes; hypre_Box *box; hypre_Box *A_data_box; hypre_Box *y_data_box; hypre_Box *x_data_box; double *Ap; double *yp; double *xp; HYPRE_Int Ai; HYPRE_Int yi; HYPRE_Int xi; hypre_Index index; hypre_IndexRef start; hypre_Index stride; hypre_Index loop_size; HYPRE_Int i; /* x = D^{-1} y */ hypre_SetIndex(stride, 1, 1, 1); boxes = hypre_StructGridBoxes(hypre_StructMatrixGrid(A)); hypre_ForBoxI(i, boxes) { box = hypre_BoxArrayBox(boxes, i); A_data_box = hypre_BoxArrayBox(hypre_StructMatrixDataSpace(A), i); x_data_box = hypre_BoxArrayBox(hypre_StructVectorDataSpace(x), i); y_data_box = hypre_BoxArrayBox(hypre_StructVectorDataSpace(y), i); hypre_SetIndex(index, 0, 0, 0); Ap = hypre_StructMatrixExtractPointerByIndex(A, i, index); xp = hypre_StructVectorBoxData(x, i); yp = hypre_StructVectorBoxData(y, i); start = hypre_BoxIMin(box); hypre_BoxGetSize(box, loop_size); hypre_BoxLoop3Begin(hypre_StructVectorDim(Hx), loop_size, A_data_box, start, stride, Ai, x_data_box, start, stride, xi, y_data_box, start, stride, yi); #ifdef HYPRE_USING_OPENMP #pragma omp parallel for private(HYPRE_BOX_PRIVATE,yi,xi,Ai) HYPRE_SMP_SCHEDULE #endif hypre_BoxLoop3For(Ai, xi, yi) { xp[xi] = yp[yi] / Ap[Ai]; } hypre_BoxLoop3End(Ai, xi, yi); }
int HYPRE_StructDiagScale( HYPRE_StructSolver solver, HYPRE_StructMatrix HA, HYPRE_StructVector Hy, HYPRE_StructVector Hx ) { hypre_StructMatrix *A = (hypre_StructMatrix *) HA; hypre_StructVector *y = (hypre_StructVector *) Hy; hypre_StructVector *x = (hypre_StructVector *) Hx; hypre_BoxArray *boxes; hypre_Box *box; hypre_Box *A_data_box; hypre_Box *y_data_box; hypre_Box *x_data_box; double *Ap; double *yp; double *xp; int Ai; int yi; int xi; hypre_Index index; hypre_IndexRef start; hypre_Index stride; hypre_Index loop_size; int i; int loopi, loopj, loopk; int ierr = 0; /* x = D^{-1} y */ hypre_SetIndex(stride, 1, 1, 1); boxes = hypre_StructGridBoxes(hypre_StructMatrixGrid(A)); hypre_ForBoxI(i, boxes) { box = hypre_BoxArrayBox(boxes, i); A_data_box = hypre_BoxArrayBox(hypre_StructMatrixDataSpace(A), i); x_data_box = hypre_BoxArrayBox(hypre_StructVectorDataSpace(x), i); y_data_box = hypre_BoxArrayBox(hypre_StructVectorDataSpace(y), i); hypre_SetIndex(index, 0, 0, 0); Ap = hypre_StructMatrixExtractPointerByIndex(A, i, index); xp = hypre_StructVectorBoxData(x, i); yp = hypre_StructVectorBoxData(y, i); start = hypre_BoxIMin(box); hypre_BoxGetSize(box, loop_size); hypre_BoxLoop3Begin(loop_size, A_data_box, start, stride, Ai, x_data_box, start, stride, xi, y_data_box, start, stride, yi); #define HYPRE_BOX_SMP_PRIVATE loopk,loopi,loopj,yi,xi,Ai #include "hypre_box_smp_forloop.h" hypre_BoxLoop3For(loopi, loopj, loopk, Ai, xi, yi) { xp[xi] = yp[yi] / Ap[Ai]; } hypre_BoxLoop3End(Ai, xi, yi); }
HYPRE_Int hypre_StructInterpAssemble( hypre_StructMatrix *A, hypre_StructMatrix *P, HYPRE_Int P_stored_as_transpose, HYPRE_Int cdir, hypre_Index index, hypre_Index stride ) { hypre_StructGrid *grid = hypre_StructMatrixGrid(A); hypre_BoxArrayArray *box_aa; hypre_BoxArray *box_a; hypre_Box *box; hypre_CommInfo *comm_info; hypre_CommPkg *comm_pkg; hypre_CommHandle *comm_handle; HYPRE_Int num_ghost[] = {0, 0, 0, 0, 0, 0}; HYPRE_Int i, j, s, dim; if (hypre_StructMatrixConstantCoefficient(P) != 0) { return hypre_error_flag; } /* set num_ghost */ dim = hypre_StructGridDim(grid); for (j = 0; j < dim; j++) { num_ghost[2*j] = 1; num_ghost[2*j+1] = 1; } if (P_stored_as_transpose) { num_ghost[2*cdir] = 2; num_ghost[2*cdir+1] = 2; } /* comm_info <-- From fine grid grown by num_ghost */ hypre_CreateCommInfoFromNumGhost(grid, num_ghost, &comm_info); /* Project and map comm_info onto coarsened index space */ hypre_CommInfoProjectSend(comm_info, index, stride); hypre_CommInfoProjectRecv(comm_info, index, stride); for (s = 0; s < 3; s++) { switch(s) { case 0: box_aa = hypre_CommInfoSendBoxes(comm_info); hypre_SetIndex(hypre_CommInfoSendStride(comm_info), 1, 1, 1); break; case 1: box_aa = hypre_CommInfoRecvBoxes(comm_info); hypre_SetIndex(hypre_CommInfoRecvStride(comm_info), 1, 1, 1); break; case 2: box_aa = hypre_CommInfoSendRBoxes(comm_info); break; } hypre_ForBoxArrayI(j, box_aa) { box_a = hypre_BoxArrayArrayBoxArray(box_aa, j); hypre_ForBoxI(i, box_a) { box = hypre_BoxArrayBox(box_a, i); hypre_StructMapFineToCoarse(hypre_BoxIMin(box), index, stride, hypre_BoxIMin(box)); hypre_StructMapFineToCoarse(hypre_BoxIMax(box), index, stride, hypre_BoxIMax(box)); } }
int hypre_SMG2BuildRAPSym( hypre_StructMatrix *A, hypre_StructMatrix *PT, hypre_StructMatrix *R, hypre_StructMatrix *RAP, hypre_Index cindex, hypre_Index cstride ) { hypre_Index index; hypre_StructStencil *fine_stencil; int fine_stencil_size; hypre_StructGrid *fgrid; int *fgrid_ids; hypre_StructGrid *cgrid; hypre_BoxArray *cgrid_boxes; int *cgrid_ids; hypre_Box *cgrid_box; hypre_IndexRef cstart; hypre_Index stridec; hypre_Index fstart; hypre_IndexRef stridef; hypre_Index loop_size; int fi, ci; int loopi, loopj, loopk; hypre_Box *A_dbox; hypre_Box *PT_dbox; hypre_Box *R_dbox; hypre_Box *RAP_dbox; double *pa, *pb; double *ra, *rb; double *a_cc, *a_cw, *a_ce, *a_cs, *a_cn; double *a_csw, *a_cse, *a_cnw; double *rap_cc, *rap_cw, *rap_cs; double *rap_csw, *rap_cse; int iA, iAm1, iAp1; int iAc; int iP, iP1; int iR; int yOffsetA; int xOffsetP; int yOffsetP; int ierr = 0; fine_stencil = hypre_StructMatrixStencil(A); fine_stencil_size = hypre_StructStencilSize(fine_stencil); stridef = cstride; hypre_SetIndex(stridec, 1, 1, 1); fgrid = hypre_StructMatrixGrid(A); fgrid_ids = hypre_StructGridIDs(fgrid); cgrid = hypre_StructMatrixGrid(RAP); cgrid_boxes = hypre_StructGridBoxes(cgrid); cgrid_ids = hypre_StructGridIDs(cgrid); fi = 0; hypre_ForBoxI(ci, cgrid_boxes) { while (fgrid_ids[fi] != cgrid_ids[ci]) { fi++; } cgrid_box = hypre_BoxArrayBox(cgrid_boxes, ci); cstart = hypre_BoxIMin(cgrid_box); hypre_StructMapCoarseToFine(cstart, cindex, cstride, fstart); A_dbox = hypre_BoxArrayBox(hypre_StructMatrixDataSpace(A), fi); PT_dbox = hypre_BoxArrayBox(hypre_StructMatrixDataSpace(PT), fi); R_dbox = hypre_BoxArrayBox(hypre_StructMatrixDataSpace(R), fi); RAP_dbox = hypre_BoxArrayBox(hypre_StructMatrixDataSpace(RAP), ci); /*----------------------------------------------------------------- * Extract pointers for interpolation operator: * pa is pointer for weight for f-point above c-point * pb is pointer for weight for f-point below c-point *-----------------------------------------------------------------*/ hypre_SetIndex(index,0,1,0); pa = hypre_StructMatrixExtractPointerByIndex(PT, fi, index); hypre_SetIndex(index,0,-1,0); pb = hypre_StructMatrixExtractPointerByIndex(PT, fi, index); /*----------------------------------------------------------------- * Extract pointers for restriction operator: * ra is pointer for weight for f-point above c-point * rb is pointer for weight for f-point below c-point *-----------------------------------------------------------------*/ hypre_SetIndex(index,0,1,0); ra = hypre_StructMatrixExtractPointerByIndex(R, fi, index); hypre_SetIndex(index,0,-1,0); rb = hypre_StructMatrixExtractPointerByIndex(R, fi, index); /*----------------------------------------------------------------- * Extract pointers for 5-point fine grid operator: * * a_cc is pointer for center coefficient * a_cw is pointer for west coefficient * a_ce is pointer for east coefficient * a_cs is pointer for south coefficient * a_cn is pointer for north coefficient *-----------------------------------------------------------------*/ hypre_SetIndex(index,0,0,0); a_cc = hypre_StructMatrixExtractPointerByIndex(A, fi, index); hypre_SetIndex(index,-1,0,0); a_cw = hypre_StructMatrixExtractPointerByIndex(A, fi, index); hypre_SetIndex(index,1,0,0); a_ce = hypre_StructMatrixExtractPointerByIndex(A, fi, index); hypre_SetIndex(index,0,-1,0); a_cs = hypre_StructMatrixExtractPointerByIndex(A, fi, index); hypre_SetIndex(index,0,1,0); a_cn = hypre_StructMatrixExtractPointerByIndex(A, fi, index); /*----------------------------------------------------------------- * Extract additional pointers for 9-point fine grid operator: * * a_csw is pointer for southwest coefficient * a_cse is pointer for southeast coefficient * a_cnw is pointer for northwest coefficient * a_cne is pointer for northeast coefficient *-----------------------------------------------------------------*/ if(fine_stencil_size > 5) { hypre_SetIndex(index,-1,-1,0); a_csw = hypre_StructMatrixExtractPointerByIndex(A, fi, index); hypre_SetIndex(index,1,-1,0); a_cse = hypre_StructMatrixExtractPointerByIndex(A, fi, index); hypre_SetIndex(index,-1,1,0); a_cnw = hypre_StructMatrixExtractPointerByIndex(A, fi, index); } /*----------------------------------------------------------------- * Extract pointers for coarse grid operator - always 9-point: * * We build only the lower triangular part (plus diagonal). * * rap_cc is pointer for center coefficient (etc.) *-----------------------------------------------------------------*/ hypre_SetIndex(index,0,0,0); rap_cc = hypre_StructMatrixExtractPointerByIndex(RAP, ci, index); hypre_SetIndex(index,-1,0,0); rap_cw = hypre_StructMatrixExtractPointerByIndex(RAP, ci, index); hypre_SetIndex(index,0,-1,0); rap_cs = hypre_StructMatrixExtractPointerByIndex(RAP, ci, index); hypre_SetIndex(index,-1,-1,0); rap_csw = hypre_StructMatrixExtractPointerByIndex(RAP, ci, index); hypre_SetIndex(index,1,-1,0); rap_cse = hypre_StructMatrixExtractPointerByIndex(RAP, ci, index); /*----------------------------------------------------------------- * Define offsets for fine grid stencil and interpolation * * In the BoxLoop below I assume iA and iP refer to data associated * with the point which we are building the stencil for. The below * Offsets are used in refering to data associated with other points. *-----------------------------------------------------------------*/ hypre_SetIndex(index,0,1,0); yOffsetA = hypre_BoxOffsetDistance(A_dbox,index); yOffsetP = hypre_BoxOffsetDistance(PT_dbox,index); hypre_SetIndex(index,1,0,0); xOffsetP = hypre_BoxOffsetDistance(PT_dbox,index); /*----------------------------------------------------------------- * Switch statement to direct control to apropriate BoxLoop depending * on stencil size. Default is full 9-point. *-----------------------------------------------------------------*/ switch (fine_stencil_size) { /*-------------------------------------------------------------- * Loop for symmetric 5-point fine grid operator; produces a * symmetric 9-point coarse grid operator. We calculate only the * lower triangular stencil entries: (southwest, south, southeast, * west, and center). *--------------------------------------------------------------*/ case 5: hypre_BoxGetSize(cgrid_box, loop_size); hypre_BoxLoop4Begin(loop_size, PT_dbox, cstart, stridec, iP, R_dbox, cstart, stridec, iR, A_dbox, fstart, stridef, iA, RAP_dbox, cstart, stridec, iAc); #define HYPRE_BOX_SMP_PRIVATE loopk,loopi,loopj,iP,iR,iA,iAc,iAm1,iAp1,iP1 #include "hypre_box_smp_forloop.h" hypre_BoxLoop4For(loopi, loopj, loopk, iP, iR, iA, iAc) { iAm1 = iA - yOffsetA; iAp1 = iA + yOffsetA; iP1 = iP - yOffsetP - xOffsetP; rap_csw[iAc] = rb[iR] * a_cw[iAm1] * pa[iP1]; iP1 = iP - yOffsetP; rap_cs[iAc] = rb[iR] * a_cc[iAm1] * pa[iP1] + rb[iR] * a_cs[iAm1] + a_cs[iA] * pa[iP1]; iP1 = iP - yOffsetP + xOffsetP; rap_cse[iAc] = rb[iR] * a_ce[iAm1] * pa[iP1]; iP1 = iP - xOffsetP; rap_cw[iAc] = a_cw[iA] + rb[iR] * a_cw[iAm1] * pb[iP1] + ra[iR] * a_cw[iAp1] * pa[iP1]; rap_cc[iAc] = a_cc[iA] + rb[iR] * a_cc[iAm1] * pb[iP] + ra[iR] * a_cc[iAp1] * pa[iP] + rb[iR] * a_cn[iAm1] + ra[iR] * a_cs[iAp1] + a_cs[iA] * pb[iP] + a_cn[iA] * pa[iP]; } hypre_BoxLoop4End(iP, iR, iA, iAc); break; /*-------------------------------------------------------------- * Loop for symmetric 9-point fine grid operator; produces a * symmetric 9-point coarse grid operator. We calculate only the * lower triangular stencil entries: (southwest, south, southeast, * west, and center). *--------------------------------------------------------------*/ default: hypre_BoxGetSize(cgrid_box, loop_size); hypre_BoxLoop4Begin(loop_size, PT_dbox, cstart, stridec, iP, R_dbox, cstart, stridec, iR, A_dbox, fstart, stridef, iA, RAP_dbox, cstart, stridec, iAc); #define HYPRE_BOX_SMP_PRIVATE loopk,loopi,loopj,iP,iR,iA,iAc,iAm1,iAp1,iP1 #include "hypre_box_smp_forloop.h" hypre_BoxLoop4For(loopi, loopj, loopk, iP, iR, iA, iAc) { iAm1 = iA - yOffsetA; iAp1 = iA + yOffsetA; iP1 = iP - yOffsetP - xOffsetP; rap_csw[iAc] = rb[iR] * a_cw[iAm1] * pa[iP1] + rb[iR] * a_csw[iAm1] + a_csw[iA] * pa[iP1]; iP1 = iP - yOffsetP; rap_cs[iAc] = rb[iR] * a_cc[iAm1] * pa[iP1] + rb[iR] * a_cs[iAm1] + a_cs[iA] * pa[iP1]; iP1 = iP - yOffsetP + xOffsetP; rap_cse[iAc] = rb[iR] * a_ce[iAm1] * pa[iP1] + rb[iR] * a_cse[iAm1] + a_cse[iA] * pa[iP1]; iP1 = iP - xOffsetP; rap_cw[iAc] = a_cw[iA] + rb[iR] * a_cw[iAm1] * pb[iP1] + ra[iR] * a_cw[iAp1] * pa[iP1] + rb[iR] * a_cnw[iAm1] + ra[iR] * a_csw[iAp1] + a_csw[iA] * pb[iP1] + a_cnw[iA] * pa[iP1]; rap_cc[iAc] = a_cc[iA] + rb[iR] * a_cc[iAm1] * pb[iP] + ra[iR] * a_cc[iAp1] * pa[iP] + rb[iR] * a_cn[iAm1] + ra[iR] * a_cs[iAp1] + a_cs[iA] * pb[iP] + a_cn[iA] * pa[iP]; } hypre_BoxLoop4End(iP, iR, iA, iAc); break; } /* end switch statement */
hypre_StructMatrix * hypre_StructMatrixCreateMask( hypre_StructMatrix *matrix, int num_stencil_indices, int *stencil_indices ) { hypre_StructMatrix *mask; hypre_StructStencil *stencil; hypre_Index *stencil_shape; int stencil_size; hypre_Index *mask_stencil_shape; int mask_stencil_size; hypre_BoxArray *data_space; int **data_indices; int **mask_data_indices; int i, j; stencil = hypre_StructMatrixStencil(matrix); stencil_shape = hypre_StructStencilShape(stencil); stencil_size = hypre_StructStencilSize(stencil); mask = hypre_CTAlloc(hypre_StructMatrix, 1); hypre_StructMatrixComm(mask) = hypre_StructMatrixComm(matrix); hypre_StructGridRef(hypre_StructMatrixGrid(matrix), &hypre_StructMatrixGrid(mask)); hypre_StructMatrixUserStencil(mask) = hypre_StructStencilRef(hypre_StructMatrixUserStencil(matrix)); mask_stencil_size = num_stencil_indices; mask_stencil_shape = hypre_CTAlloc(hypre_Index, num_stencil_indices); for (i = 0; i < num_stencil_indices; i++) { hypre_CopyIndex(stencil_shape[stencil_indices[i]], mask_stencil_shape[i]); } hypre_StructMatrixStencil(mask) = hypre_StructStencilCreate(hypre_StructStencilDim(stencil), mask_stencil_size, mask_stencil_shape); hypre_StructMatrixNumValues(mask) = hypre_StructMatrixNumValues(matrix); hypre_StructMatrixDataSpace(mask) = hypre_BoxArrayDuplicate(hypre_StructMatrixDataSpace(matrix)); hypre_StructMatrixData(mask) = hypre_StructMatrixData(matrix); hypre_StructMatrixDataAlloced(mask) = 0; hypre_StructMatrixDataSize(mask) = hypre_StructMatrixDataSize(matrix); data_space = hypre_StructMatrixDataSpace(matrix); data_indices = hypre_StructMatrixDataIndices(matrix); mask_data_indices = hypre_CTAlloc(int *, hypre_BoxArraySize(data_space)); hypre_ForBoxI(i, data_space) { mask_data_indices[i] = hypre_TAlloc(int, num_stencil_indices); for (j = 0; j < num_stencil_indices; j++) { mask_data_indices[i][j] = data_indices[i][stencil_indices[j]]; } }