예제 #1
0
/*************************************************************************
* This function computes the subdomain graph
**************************************************************************/
void EliminateSubDomainEdges(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts)
{
  int i, ii, j, k, me, other, nvtxs, total, max, avg, totalout, nind, ncand, ncand2, target, target2, nadd;
  int min, move, cpwgt, tvwgt;
  idxtype *xadj, *adjncy, *vwgt, *adjwgt, *pwgts, *where, *maxpwgt, *pmat, *ndoms, *mypmat, *otherpmat, *ind;
  KeyValueType *cand, *cand2;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  vwgt = graph->vwgt;
  adjwgt = graph->adjwgt;

  where = graph->where;
  pwgts = graph->pwgts;  /* We assume that this is properly initialized */

  maxpwgt = idxwspacemalloc(ctrl, nparts);
  ndoms = idxwspacemalloc(ctrl, nparts);
  otherpmat = idxwspacemalloc(ctrl, nparts);
  ind = idxwspacemalloc(ctrl, nvtxs);
  pmat = ctrl->wspace.pmat;

  cand = (KeyValueType *)GKmalloc(nparts*sizeof(KeyValueType), "EliminateSubDomainEdges: cand");
  cand2 = (KeyValueType *)GKmalloc(nparts*sizeof(KeyValueType), "EliminateSubDomainEdges: cand");

  /* Compute the pmat matrix and ndoms */
  ComputeSubDomainGraph(graph, nparts, pmat, ndoms);


  /* Compute the maximum allowed weight for each domain */
  tvwgt = idxsum(nparts, pwgts);
  for (i=0; i<nparts; i++)
    maxpwgt[i] = 1.25*tpwgts[i]*tvwgt;


  /* Get into the loop eliminating subdomain connections */
  for (;;) {
    total = idxsum(nparts, ndoms);
    avg = total/nparts;
    max = ndoms[idxamax(nparts, ndoms)];

    /* printf("Adjacent Subdomain Stats: Total: %3d, Max: %3d, Avg: %3d [%5d]\n", total, max, avg, idxsum(nparts*nparts, pmat)); */

    if (max < 1.4*avg)
      break;

    me = idxamax(nparts, ndoms);
    mypmat = pmat + me*nparts;
    totalout = idxsum(nparts, mypmat);

    /*printf("Me: %d, TotalOut: %d,\n", me, totalout);*/

    /* Sort the connections according to their cut */
    for (ncand2=0, i=0; i<nparts; i++) {
      if (mypmat[i] > 0) {
        cand2[ncand2].key = mypmat[i];
        cand2[ncand2++].val = i;
      }
    }
    ikeysort(ncand2, cand2);

    move = 0;
    for (min=0; min<ncand2; min++) {
      if (cand2[min].key > totalout/(2*ndoms[me])) 
        break;

      other = cand2[min].val;

      /*printf("\tMinOut: %d to %d\n", mypmat[other], other);*/

      idxset(nparts, 0, otherpmat);

      /* Go and find the vertices in 'other' that are connected in 'me' */
      for (nind=0, i=0; i<nvtxs; i++) {
        if (where[i] == other) {
          for (j=xadj[i]; j<xadj[i+1]; j++) {
            if (where[adjncy[j]] == me) {
              ind[nind++] = i;
              break;
            }
          }
        }
      }

      /* Go and construct the otherpmat to see where these nind vertices are connected to */
      for (cpwgt=0, ii=0; ii<nind; ii++) {
        i = ind[ii];
        cpwgt += vwgt[i];

        for (j=xadj[i]; j<xadj[i+1]; j++) 
          otherpmat[where[adjncy[j]]] += adjwgt[j];
      }
      otherpmat[other] = 0;

      for (ncand=0, i=0; i<nparts; i++) {
        if (otherpmat[i] > 0) {
          cand[ncand].key = -otherpmat[i];
          cand[ncand++].val = i;
        }
      }
      ikeysort(ncand, cand);

      /* 
       * Go through and the select the first domain that is common with 'me', and
       * does not increase the ndoms[target] higher than my ndoms, subject to the
       * maxpwgt constraint. Traversal is done from the mostly connected to the least.
       */
      target = target2 = -1;
      for (i=0; i<ncand; i++) {
        k = cand[i].val;

        if (mypmat[k] > 0) {
          if (pwgts[k] + cpwgt > maxpwgt[k])  /* Check if balance will go off */
            continue;

          for (j=0; j<nparts; j++) {
            if (otherpmat[j] > 0 && ndoms[j] >= ndoms[me]-1 && pmat[nparts*j+k] == 0)
              break;
          }
          if (j == nparts) { /* No bad second level effects */
            for (nadd=0, j=0; j<nparts; j++) {
              if (otherpmat[j] > 0 && pmat[nparts*k+j] == 0)
                nadd++;
            }

            /*printf("\t\tto=%d, nadd=%d, %d\n", k, nadd, ndoms[k]);*/
            if (target2 == -1 && ndoms[k]+nadd < ndoms[me]) {
              target2 = k;
            }
            if (nadd == 0) {
              target = k;
              break;
            }
          }
        }
      }
      if (target == -1 && target2 != -1)
        target = target2;

      if (target == -1) {
        /* printf("\t\tCould not make the move\n");*/
        continue;
      }

      /*printf("\t\tMoving to %d\n", target);*/

      /* Update the partition weights */
      INC_DEC(pwgts[target], pwgts[other], cpwgt);

      MoveGroupMConn(ctrl, graph, ndoms, pmat, nparts, target, nind, ind);

      move = 1;
      break;
    }

    if (move == 0)
      break;
  }

  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nvtxs);

  GKfree((void**)&cand, &cand2, LTERM);
}
예제 #2
0
파일: kwayfm.c 프로젝트: davidheryanto/sc14
/*************************************************************************
* This function performs k-way refinement
**************************************************************************/
void Random_KWayEdgeRefine(CtrlType *ctrl, GraphType *graph, int nparts, floattype *tpwgts, floattype ubfactor, int npasses, int ffactor)
{
  int i, ii, iii, j, jj, k, l, pass, nvtxs, nmoves, nbnd, tvwgt, myndegrees; 
  int from, me, to, oldcut, vwgt, gain;
  idxtype *xadj, *adjncy, *adjwgt;
  idxtype *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt, *itpwgts;
  EDegreeType *myedegrees;
  RInfoType *myrinfo;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;

  bndptr = graph->bndptr;
  bndind = graph->bndind;

  where = graph->where;
  pwgts = graph->pwgts;
  
  /* Setup the weight intervals of the various subdomains */
  minwgt =  idxwspacemalloc(ctrl, nparts);
  maxwgt = idxwspacemalloc(ctrl, nparts);
  itpwgts = idxwspacemalloc(ctrl, nparts);
  tvwgt = idxsum(nparts, pwgts);
  ASSERT(tvwgt == idxsum(nvtxs, graph->vwgt));

  for (i=0; i<nparts; i++) {
    itpwgts[i] = tpwgts[i]*tvwgt;
    maxwgt[i] = tpwgts[i]*tvwgt*ubfactor;
    minwgt[i] = tpwgts[i]*tvwgt*(1.0/ubfactor);
  }

  perm = idxwspacemalloc(ctrl, nvtxs);

  IFSET(ctrl->dbglvl, DBG_REFINE,
     printf("Partitions: [%6d %6d]-[%6d %6d], Balance: %5.3f, Nv-Nb[%6d %6d]. Cut: %6d\n",
             pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], minwgt[0], maxwgt[0], 
             1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nvtxs, graph->nbnd,
             graph->mincut));

  for (pass=0; pass<npasses; pass++) {
    ASSERT(ComputeCut(graph, where) == graph->mincut);

    oldcut = graph->mincut;
    nbnd = graph->nbnd;

    RandomPermute(nbnd, perm, 1);
    for (nmoves=iii=0; iii<graph->nbnd; iii++) {
      ii = perm[iii];
      if (ii >= nbnd)
        continue;
      i = bndind[ii];

      myrinfo = graph->rinfo+i;

      if (myrinfo->ed >= myrinfo->id) { /* Total ED is too high */
        from = where[i];
        vwgt = graph->vwgt[i];

        if (myrinfo->id > 0 && pwgts[from]-vwgt < minwgt[from]) 
          continue;   /* This cannot be moved! */

        myedegrees = myrinfo->edegrees;
        myndegrees = myrinfo->ndegrees;

        j = myrinfo->id;
        for (k=0; k<myndegrees; k++) {
          to = myedegrees[k].pid;
          gain = myedegrees[k].ed-j; /* j = myrinfo->id. Allow good nodes to move */ 
          if (pwgts[to]+vwgt <= maxwgt[to]+ffactor*gain && gain >= 0)  
            break;
        }
        if (k == myndegrees)
          continue;  /* break out if you did not find a candidate */

        for (j=k+1; j<myndegrees; j++) {
          to = myedegrees[j].pid;
          if ((myedegrees[j].ed > myedegrees[k].ed && pwgts[to]+vwgt <= maxwgt[to]) ||
              (myedegrees[j].ed == myedegrees[k].ed && 
               itpwgts[myedegrees[k].pid]*pwgts[to] < itpwgts[to]*pwgts[myedegrees[k].pid]))
            k = j;
        }

        to = myedegrees[k].pid;

        j = 0;
        if (myedegrees[k].ed-myrinfo->id > 0)
          j = 1;
        else if (myedegrees[k].ed-myrinfo->id == 0) {
          if ((iii&7) == 0 || pwgts[from] >= maxwgt[from] || itpwgts[from]*(pwgts[to]+vwgt) < itpwgts[to]*pwgts[from])
            j = 1;
        }
        if (j == 0)
          continue;
          
        /*=====================================================================
        * If we got here, we can now move the vertex from 'from' to 'to' 
        *======================================================================*/
        graph->mincut -= myedegrees[k].ed-myrinfo->id;

        IFSET(ctrl->dbglvl, DBG_MOVEINFO, printf("\t\tMoving %6d to %3d. Gain: %4d. Cut: %6d\n", i, to, myedegrees[k].ed-myrinfo->id, graph->mincut));

        /* Update where, weight, and ID/ED information of the vertex you moved */
        where[i] = to;
        INC_DEC(pwgts[to], pwgts[from], vwgt);
        myrinfo->ed += myrinfo->id-myedegrees[k].ed;
        SWAP(myrinfo->id, myedegrees[k].ed, j);
        if (myedegrees[k].ed == 0) 
          myedegrees[k] = myedegrees[--myrinfo->ndegrees];
        else
          myedegrees[k].pid = from;

        if (myrinfo->ed-myrinfo->id < 0)
          BNDDelete(nbnd, bndind, bndptr, i);

        /* Update the degrees of adjacent vertices */
        for (j=xadj[i]; j<xadj[i+1]; j++) {
          ii = adjncy[j];
          me = where[ii];

          myrinfo = graph->rinfo+ii;
          if (myrinfo->edegrees == NULL) {
            myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;
            ctrl->wspace.cdegree += xadj[ii+1]-xadj[ii];
          }
          myedegrees = myrinfo->edegrees;

          ASSERT(CheckRInfo(myrinfo));

          if (me == from) {
            INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]);

            if (myrinfo->ed-myrinfo->id >= 0 && bndptr[ii] == -1)
              BNDInsert(nbnd, bndind, bndptr, ii);
          }
          else if (me == to) {
            INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]);

            if (myrinfo->ed-myrinfo->id < 0 && bndptr[ii] != -1)
              BNDDelete(nbnd, bndind, bndptr, ii);
          }

          /* Remove contribution from the .ed of 'from' */
          if (me != from) {
            for (k=0; k<myrinfo->ndegrees; k++) {
              if (myedegrees[k].pid == from) {
                if (myedegrees[k].ed == adjwgt[j])
                  myedegrees[k] = myedegrees[--myrinfo->ndegrees];
                else
                  myedegrees[k].ed -= adjwgt[j];
                break;
              }
            }
          }

          /* Add contribution to the .ed of 'to' */
          if (me != to) {
            for (k=0; k<myrinfo->ndegrees; k++) {
              if (myedegrees[k].pid == to) {
                myedegrees[k].ed += adjwgt[j];
                break;
              }
            }
            if (k == myrinfo->ndegrees) {
              myedegrees[myrinfo->ndegrees].pid = to;
              myedegrees[myrinfo->ndegrees++].ed = adjwgt[j];
            }
          }

          ASSERT(myrinfo->ndegrees <= xadj[ii+1]-xadj[ii]);
          ASSERT(CheckRInfo(myrinfo));

        }
        nmoves++;
      }
    }

    graph->nbnd = nbnd;

    IFSET(ctrl->dbglvl, DBG_REFINE,
       printf("\t[%6d %6d], Balance: %5.3f, Nb: %6d. Nmoves: %5d, Cut: %6d, Vol: %6d\n",
               pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)],
               1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nbnd, nmoves, graph->mincut, ComputeVolume(graph, where)));

    if (graph->mincut == oldcut)
      break;
  }

  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nvtxs);
}
예제 #3
0
/*************************************************************************
* This function projects a partition, and at the same time computes the
* parameters for refinement.
**************************************************************************/
void ProjectVolKWayPartition(CtrlType *ctrl, GraphType *graph, int nparts)
{
  int i, j, k, nvtxs, me, other, istart, iend, ndegrees;
  idxtype *xadj, *adjncy, *adjwgt, *adjwgtsum;
  idxtype *cmap, *where;
  idxtype *cwhere;
  GraphType *cgraph;
  VRInfoType *crinfo, *rinfo, *myrinfo;
  VEDegreeType *myedegrees;
  idxtype *htable;

  cgraph = graph->coarser;
  cwhere = cgraph->where;
  crinfo = cgraph->vrinfo;

  nvtxs = graph->nvtxs;
  cmap = graph->cmap;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  adjwgtsum = graph->adjwgtsum;

  AllocateVolKWayPartitionMemory(ctrl, graph, nparts);
  where = graph->where;
  rinfo = graph->vrinfo;

  /* Go through and project partition and compute id/ed for the nodes */
  for (i=0; i<nvtxs; i++) {
    k = cmap[i];
    where[i] = cwhere[k];
    cmap[i] = crinfo[k].ed;  /* For optimization */
  }

  htable = idxset(nparts, -1, idxwspacemalloc(ctrl, nparts));

  ctrl->wspace.cdegree = 0;
  for (i=0; i<nvtxs; i++) {
    me = where[i];

    myrinfo = rinfo+i;
    myrinfo->id = myrinfo->ed = myrinfo->nid = myrinfo->ndegrees = 0;
    myrinfo->edegrees = NULL;

    myrinfo->id = adjwgtsum[i];
    myrinfo->nid = xadj[i+1]-xadj[i];

    if (cmap[i] > 0) { /* If it is an interface node. Note cmap[i] = crinfo[cmap[i]].ed */
      istart = xadj[i];
      iend = xadj[i+1];

      myedegrees = myrinfo->edegrees = ctrl->wspace.vedegrees+ctrl->wspace.cdegree;
      ctrl->wspace.cdegree += iend-istart;

      ndegrees = 0;
      for (j=istart; j<iend; j++) {
        other = where[adjncy[j]];
        if (me != other) {
          myrinfo->ed += adjwgt[j];
          myrinfo->nid--;
          if ((k = htable[other]) == -1) {
            htable[other] = ndegrees;
            myedegrees[ndegrees].gv = 0;
            myedegrees[ndegrees].pid = other;
            myedegrees[ndegrees].ed = adjwgt[j];
            myedegrees[ndegrees++].ned = 1;
          }
          else {
            myedegrees[k].ed += adjwgt[j];
            myedegrees[k].ned++;
          }
        }
      }
      myrinfo->id -= myrinfo->ed;

      /* Remove space for edegrees if it was interior */
      if (myrinfo->ed == 0) { 
        myrinfo->edegrees = NULL;
        ctrl->wspace.cdegree -= iend-istart;
      }
      else {
        myrinfo->ndegrees = ndegrees;

        for (j=0; j<ndegrees; j++)
          htable[myedegrees[j].pid] = -1;
      }
    }
  }

  ComputeKWayVolGains(ctrl, graph, nparts);

  idxcopy(nparts, cgraph->pwgts, graph->pwgts);
  graph->mincut = cgraph->mincut;

  FreeGraph(graph->coarser);
  graph->coarser = NULL;

  idxwspacefree(ctrl, nparts);

}
예제 #4
0
파일: balance.c 프로젝트: dwickeroth/covise
/*************************************************************************
* This function balances two partitions by moving boundary nodes
* from the domain that is overweight to the one that is underweight.
**************************************************************************/
void Bnd2WayBalance(CtrlType *ctrl, GraphType *graph, int *tpwgts)
{
  int i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, tmp;
  idxtype *xadj, *vwgt, *adjncy, *adjwgt, *where, *id, *ed, *bndptr, *bndind, *pwgts;
  idxtype *moved, *perm;
  PQueueType parts;
  int higain, oldgain, mincut, mindiff;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  vwgt = graph->vwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  where = graph->where;
  id = graph->id;
  ed = graph->ed;
  pwgts = graph->pwgts;
  bndptr = graph->bndptr;
  bndind = graph->bndind;

  moved = idxwspacemalloc(ctrl, nvtxs);
  perm = idxwspacemalloc(ctrl, nvtxs);

  /* Determine from which domain you will be moving data */
  mindiff = abs(tpwgts[0]-pwgts[0]);
  from = (pwgts[0] < tpwgts[0] ? 1 : 0);
  to = (from+1)%2;

  IFSET(ctrl->dbglvl, DBG_REFINE, 
     printf("Partitions: [%6d %6d] T[%6d %6d], Nv-Nb[%6d %6d]. ICut: %6d [B]\n",
             pwgts[0], pwgts[1], tpwgts[0], tpwgts[1], graph->nvtxs, graph->nbnd, graph->mincut));

  tmp = graph->adjwgtsum[idxamax(nvtxs, graph->adjwgtsum)];
  PQueueInit(ctrl, &parts, nvtxs, tmp);

  idxset(nvtxs, -1, moved);

  ASSERT(ComputeCut(graph, where) == graph->mincut);
  ASSERT(CheckBnd(graph));

  /* Insert the boundary nodes of the proper partition whose size is OK in the priority queue */
  nbnd = graph->nbnd;
  RandomPermute(nbnd, perm, 1);
  for (ii=0; ii<nbnd; ii++) {
    i = perm[ii];
    ASSERT(ed[bndind[i]] > 0 || id[bndind[i]] == 0);
    ASSERT(bndptr[bndind[i]] != -1);
    if (where[bndind[i]] == from && vwgt[bndind[i]] <= mindiff)
      PQueueInsert(&parts, bndind[i], ed[bndind[i]]-id[bndind[i]]);
  }

  mincut = graph->mincut;
  for (nswaps=0; nswaps<nvtxs; nswaps++) {
    if ((higain = PQueueGetMax(&parts)) == -1)
      break;
    ASSERT(bndptr[higain] != -1);

    if (pwgts[to]+vwgt[higain] > tpwgts[to])
      break;

    mincut -= (ed[higain]-id[higain]);
    INC_DEC(pwgts[to], pwgts[from], vwgt[higain]);

    where[higain] = to;
    moved[higain] = nswaps;

    IFSET(ctrl->dbglvl, DBG_MOVEINFO, 
      printf("Moved %6d from %d. [%3d %3d] %5d [%4d %4d]\n", higain, from, ed[higain]-id[higain], vwgt[higain], mincut, pwgts[0], pwgts[1]));

    /**************************************************************
    * Update the id[i]/ed[i] values of the affected nodes
    ***************************************************************/
    SWAP(id[higain], ed[higain], tmp);
    if (ed[higain] == 0 && xadj[higain] < xadj[higain+1]) 
      BNDDelete(nbnd, bndind,  bndptr, higain);

    for (j=xadj[higain]; j<xadj[higain+1]; j++) {
      k = adjncy[j];
      oldgain = ed[k]-id[k];

      kwgt = (to == where[k] ? adjwgt[j] : -adjwgt[j]);
      INC_DEC(id[k], ed[k], kwgt);

      /* Update its boundary information and queue position */
      if (bndptr[k] != -1) { /* If k was a boundary vertex */
        if (ed[k] == 0) { /* Not a boundary vertex any more */
          BNDDelete(nbnd, bndind, bndptr, k);
          if (moved[k] == -1 && where[k] == from && vwgt[k] <= mindiff)  /* Remove it if in the queues */
            PQueueDelete(&parts, k, oldgain);
        }
        else { /* If it has not been moved, update its position in the queue */
          if (moved[k] == -1 && where[k] == from && vwgt[k] <= mindiff)
            PQueueUpdate(&parts, k, oldgain, ed[k]-id[k]);
        }
      }
      else {
        if (ed[k] > 0) {  /* It will now become a boundary vertex */
          BNDInsert(nbnd, bndind, bndptr, k);
          if (moved[k] == -1 && where[k] == from && vwgt[k] <= mindiff) 
            PQueueInsert(&parts, k, ed[k]-id[k]);
        }
      }
    }
  }

  IFSET(ctrl->dbglvl, DBG_REFINE, 
    printf("\tMinimum cut: %6d, PWGTS: [%6d %6d], NBND: %6d\n", mincut, pwgts[0], pwgts[1], nbnd));

  graph->mincut = mincut;
  graph->nbnd = nbnd;

  PQueueFree(ctrl, &parts);

  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
}
예제 #5
0
/*************************************************************************
* This function performs k-way refinement
**************************************************************************/
void MCGreedy_KWayEdgeBalanceHorizontal(CtrlType *ctrl, GraphType *graph, int nparts, 
       float *ubvec, int npasses)
{
  int i, ii, j, k, pass, nvtxs, ncon, nbnd, myndegrees, oldgain, gain, nmoves; 
  int from, me, to, oldcut;
  idxtype *xadj, *adjncy, *adjwgt;
  idxtype *where, *perm, *bndptr, *bndind, *moved;
  EDegreeType *myedegrees;
  RInfoType *myrinfo;
  PQueueType queue;
  float *npwgts, *nvwgt, *minwgt, *maxwgt, tvec[MAXNCON];

  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;

  bndind = graph->bndind;
  bndptr = graph->bndptr;

  where = graph->where;
  npwgts = graph->npwgts;
  
  /* Setup the weight intervals of the various subdomains */
  minwgt =  fwspacemalloc(ctrl, ncon*nparts);
  maxwgt = fwspacemalloc(ctrl, ncon*nparts);

  for (i=0; i<nparts; i++) {
    for (j=0; j<ncon; j++) {
      maxwgt[i*ncon+j] = ubvec[j]/nparts;
      minwgt[i*ncon+j] = 1.0/(ubvec[j]*nparts);
    }
  }

  perm = idxwspacemalloc(ctrl, nvtxs);
  moved = idxwspacemalloc(ctrl, nvtxs);

  PQueueInit(ctrl, &queue, nvtxs, graph->adjwgtsum[idxamax(nvtxs, graph->adjwgtsum)]);

  if (ctrl->dbglvl&DBG_REFINE) {
    printf("Partitions: [%5.4f %5.4f], Nv-Nb[%6d %6d]. Cut: %6d, LB: ",
            npwgts[samin(ncon*nparts, npwgts)], npwgts[samax(ncon*nparts, npwgts)], 
            graph->nvtxs, graph->nbnd, graph->mincut);
    ComputeHKWayLoadImbalance(ncon, nparts, npwgts, tvec);
    for (i=0; i<ncon; i++)
      printf("%.3f ", tvec[i]);
    printf("[B]\n");
  }


  for (pass=0; pass<npasses; pass++) {
    ASSERT(ComputeCut(graph, where) == graph->mincut);

    /* Check to see if things are out of balance, given the tolerance */
    if (MocIsHBalanced(ncon, nparts, npwgts, ubvec))
      break;

    PQueueReset(&queue);
    idxset(nvtxs, -1, moved);

    oldcut = graph->mincut;
    nbnd = graph->nbnd;

    RandomPermute(nbnd, perm, 1);
    for (ii=0; ii<nbnd; ii++) {
      i = bndind[perm[ii]];
      PQueueInsert(&queue, i, graph->rinfo[i].ed - graph->rinfo[i].id);
      moved[i] = 2;
    }

    nmoves = 0;
    for (;;) {
      if ((i = PQueueGetMax(&queue)) == -1) 
        break;
      moved[i] = 1;

      myrinfo = graph->rinfo+i;
      from = where[i];
      nvwgt = graph->nvwgt+i*ncon;

      if (AreAllHVwgtsBelow(ncon, 1.0, npwgts+from*ncon, -1.0, nvwgt, minwgt+from*ncon))
        continue;   /* This cannot be moved! */

      myedegrees = myrinfo->edegrees;
      myndegrees = myrinfo->ndegrees;

      for (k=0; k<myndegrees; k++) {
        to = myedegrees[k].pid;
        if (IsHBalanceBetterFT(ncon, nparts, npwgts+from*ncon, npwgts+to*ncon, nvwgt, ubvec))
          break;
      }
      if (k == myndegrees) 
        continue;  /* break out if you did not find a candidate */

      for (j=k+1; j<myndegrees; j++) {
        to = myedegrees[j].pid;
        if (IsHBalanceBetterTT(ncon, nparts, npwgts+myedegrees[k].pid*ncon, npwgts+to*ncon, nvwgt, ubvec)) 
          k = j;
      }

      to = myedegrees[k].pid;

      j = 0;
      if (!AreAllHVwgtsBelow(ncon, 1.0, npwgts+from*ncon, 0.0, nvwgt, maxwgt+from*ncon))
        j++;
      if (myedegrees[k].ed-myrinfo->id >= 0)
        j++;
      if (!AreAllHVwgtsAbove(ncon, 1.0, npwgts+to*ncon, 0.0, nvwgt, minwgt+to*ncon) &&
          AreAllHVwgtsBelow(ncon, 1.0, npwgts+to*ncon, 1.0, nvwgt, maxwgt+to*ncon))
        j++;
      if (j == 0)
        continue;

/* DELETE
      if (myedegrees[k].ed-myrinfo->id < 0 && 
          AreAllHVwgtsBelow(ncon, 1.0, npwgts+from*ncon, 0.0, nvwgt, maxwgt+from*ncon) &&
          AreAllHVwgtsAbove(ncon, 1.0, npwgts+to*ncon, 0.0, nvwgt, minwgt+to*ncon) &&
          AreAllHVwgtsBelow(ncon, 1.0, npwgts+to*ncon, 1.0, nvwgt, maxwgt+to*ncon))
        continue;
*/
      /*=====================================================================
      * If we got here, we can now move the vertex from 'from' to 'to' 
      *======================================================================*/
      graph->mincut -= myedegrees[k].ed-myrinfo->id;

      IFSET(ctrl->dbglvl, DBG_MOVEINFO, printf("\t\tMoving %6d to %3d. Gain: %4d. Cut: %6d\n", i, to, myedegrees[k].ed-myrinfo->id, graph->mincut));

      /* Update where, weight, and ID/ED information of the vertex you moved */
      saxpy(ncon, 1.0, nvwgt, 1, npwgts+to*ncon, 1);
      saxpy(ncon, -1.0, nvwgt, 1, npwgts+from*ncon, 1);
      where[i] = to;
      myrinfo->ed += myrinfo->id-myedegrees[k].ed;
      SWAP(myrinfo->id, myedegrees[k].ed, j);
      if (myedegrees[k].ed == 0) 
        myedegrees[k] = myedegrees[--myrinfo->ndegrees];
      else
        myedegrees[k].pid = from;

      if (myrinfo->ed == 0)
        BNDDelete(nbnd, bndind, bndptr, i);

      /* Update the degrees of adjacent vertices */
      for (j=xadj[i]; j<xadj[i+1]; j++) {
        ii = adjncy[j];
        me = where[ii];

        myrinfo = graph->rinfo+ii;
        if (myrinfo->edegrees == NULL) {
          myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;
          ctrl->wspace.cdegree += xadj[ii+1]-xadj[ii];
        }
        myedegrees = myrinfo->edegrees;

        ASSERT(CheckRInfo(myrinfo));

        oldgain = (myrinfo->ed-myrinfo->id);

        if (me == from) {
          INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]);

          if (myrinfo->ed > 0 && bndptr[ii] == -1)
            BNDInsert(nbnd, bndind, bndptr, ii);
        }
        else if (me == to) {
          INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]);

          if (myrinfo->ed == 0 && bndptr[ii] != -1)
            BNDDelete(nbnd, bndind, bndptr, ii);
        }

        /* Remove contribution from the .ed of 'from' */
        if (me != from) {
          for (k=0; k<myrinfo->ndegrees; k++) {
            if (myedegrees[k].pid == from) {
              if (myedegrees[k].ed == adjwgt[j])
                myedegrees[k] = myedegrees[--myrinfo->ndegrees];
              else
                myedegrees[k].ed -= adjwgt[j];
              break;
            }
          }
        }

        /* Add contribution to the .ed of 'to' */
        if (me != to) {
          for (k=0; k<myrinfo->ndegrees; k++) {
            if (myedegrees[k].pid == to) {
              myedegrees[k].ed += adjwgt[j];
              break;
            }
          }
          if (k == myrinfo->ndegrees) {
            myedegrees[myrinfo->ndegrees].pid = to;
            myedegrees[myrinfo->ndegrees++].ed = adjwgt[j];
          }
        }


        /* Update the queue */
        if (me == to || me == from) { 
          gain = myrinfo->ed-myrinfo->id;
          if (moved[ii] == 2) {
            if (myrinfo->ed > 0)
              PQueueUpdate(&queue, ii, oldgain, gain);
            else {
              PQueueDelete(&queue, ii, oldgain);
              moved[ii] = -1;
            }
          }
          else if (moved[ii] == -1 && myrinfo->ed > 0) {
            PQueueInsert(&queue, ii, gain);
            moved[ii] = 2;
          }
        } 

        ASSERT(myrinfo->ndegrees <= xadj[ii+1]-xadj[ii]);
        ASSERT(CheckRInfo(myrinfo));
      }
      nmoves++;
    }

    graph->nbnd = nbnd;

    if (ctrl->dbglvl&DBG_REFINE) {
      printf("\t [%5.4f %5.4f], Nb: %6d, Nmoves: %5d, Cut: %6d, LB: ",
              npwgts[samin(ncon*nparts, npwgts)], npwgts[samax(ncon*nparts, npwgts)], 
              nbnd, nmoves, graph->mincut);
      ComputeHKWayLoadImbalance(ncon, nparts, npwgts, tvec);
      for (i=0; i<ncon; i++)
        printf("%.3f ", tvec[i]);
      printf("\n");
    }

    if (nmoves == 0)
      break;
  }

  PQueueFree(ctrl, &queue);

  fwspacefree(ctrl, ncon*nparts);
  fwspacefree(ctrl, ncon*nparts);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);

}
예제 #6
0
/*************************************************************************
* This function creates the coarser graph
**************************************************************************/
void CreateCoarseGraph_NVW(CtrlType *ctrl, GraphType *graph, int cnvtxs, idxtype *match, idxtype *perm)
{
  int i, j, jj, k, kk, l, m, istart, iend, nvtxs, nedges, ncon, cnedges, v, u, mask;
  idxtype *xadj, *adjncy, *adjwgtsum, *auxadj;
  idxtype *cmap, *htable;
  idxtype *cxadj, *cvwgt, *cadjncy, *cadjwgt, *cadjwgtsum;
  float *nvwgt, *cnvwgt;
  GraphType *cgraph;


  IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->ContractTmr));

  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  nvwgt = graph->nvwgt;
  adjncy = graph->adjncy;
  adjwgtsum = graph->adjwgtsum;
  cmap = graph->cmap;

  /* Initialize the coarser graph */
  cgraph = SetUpCoarseGraph(graph, cnvtxs, 0);
  cxadj = cgraph->xadj;
  cvwgt = cgraph->vwgt;
  cnvwgt = cgraph->nvwgt;
  cadjwgtsum = cgraph->adjwgtsum;
  cadjncy = cgraph->adjncy;
  cadjwgt = cgraph->adjwgt;


  iend = xadj[nvtxs];
  auxadj = ctrl->wspace.auxcore; 
  memcpy(auxadj, adjncy, iend*sizeof(idxtype)); 
  for (i=0; i<iend; i++)
    auxadj[i] = cmap[auxadj[i]];

  mask = HTLENGTH;
  htable = idxset(mask+1, -1, idxwspacemalloc(ctrl, mask+1)); 

  cxadj[0] = cnvtxs = cnedges = 0;
  for (i=0; i<nvtxs; i++) {
    v = perm[i];
    if (cmap[v] != cnvtxs) 
      continue;

    u = match[v];
    cvwgt[cnvtxs] = 1;
    cadjwgtsum[cnvtxs] = adjwgtsum[v];
    nedges = 0;

    istart = xadj[v];
    iend = xadj[v+1];
    for (j=istart; j<iend; j++) {
      k = auxadj[j];
      kk = k&mask;
      if ((m = htable[kk]) == -1) {
        cadjncy[nedges] = k;
        cadjwgt[nedges] = 1;
        htable[kk] = nedges++;
      }
      else if (cadjncy[m] == k) {
        cadjwgt[m]++;
      }
      else {
        for (jj=0; jj<nedges; jj++) {
          if (cadjncy[jj] == k) {
            cadjwgt[jj]++;
            break;
          }
        }
        if (jj == nedges) {
          cadjncy[nedges] = k;
          cadjwgt[nedges++] = 1;
        }
      }
    }

    if (v != u) { 
      cvwgt[cnvtxs]++;
      cadjwgtsum[cnvtxs] += adjwgtsum[u];

      istart = xadj[u];
      iend = xadj[u+1];
      for (j=istart; j<iend; j++) {
        k = auxadj[j];
        kk = k&mask;
        if ((m = htable[kk]) == -1) {
          cadjncy[nedges] = k;
          cadjwgt[nedges] = 1;
          htable[kk] = nedges++;
        }
        else if (cadjncy[m] == k) {
          cadjwgt[m]++;
        }
        else {
          for (jj=0; jj<nedges; jj++) {
            if (cadjncy[jj] == k) {
              cadjwgt[jj]++;
              break;
            }
          }
          if (jj == nedges) {
            cadjncy[nedges] = k;
            cadjwgt[nedges++] = 1;
          }
        }
      }

      /* Remove the contracted adjacency weight */
      jj = htable[cnvtxs&mask];
      if (jj >= 0 && cadjncy[jj] != cnvtxs) {
        for (jj=0; jj<nedges; jj++) {
          if (cadjncy[jj] == cnvtxs) 
            break;
        }
      }
      if (jj >= 0 && cadjncy[jj] == cnvtxs) { /* This 2nd check is needed for non-adjacent matchings */
        cadjwgtsum[cnvtxs] -= cadjwgt[jj];
        cadjncy[jj] = cadjncy[--nedges];
        cadjwgt[jj] = cadjwgt[nedges];
      }
    }

    ASSERTP(cadjwgtsum[cnvtxs] == idxsum(nedges, cadjwgt), ("%d %d %d %d %d\n", cnvtxs, cadjwgtsum[cnvtxs], idxsum(nedges, cadjwgt), adjwgtsum[u], adjwgtsum[v]));

    for (j=0; j<nedges; j++)
      htable[cadjncy[j]&mask] = -1;  /* Zero out the htable */
    htable[cnvtxs&mask] = -1;

    cnedges += nedges;
    cxadj[++cnvtxs] = cnedges;
    cadjncy += nedges;
    cadjwgt += nedges;
  }

  cgraph->nedges = cnedges;

  ReAdjustMemory(graph, cgraph, 0);

  IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->ContractTmr));

  idxwspacefree(ctrl, mask+1);

}
예제 #7
0
/*************************************************************************
* This function projects a partition, and at the same time computes the
* parameters for refinement.
**************************************************************************/
void MocProjectKWayPartition(CtrlType *ctrl, GraphType *graph, int nparts)
{
  int i, j, k, nvtxs, nbnd, me, other, istart, iend, ndegrees;
  idxtype *xadj, *adjncy, *adjwgt, *adjwgtsum;
  idxtype *cmap, *where, *bndptr, *bndind;
  idxtype *cwhere;
  GraphType *cgraph;
  RInfoType *crinfo, *rinfo, *myrinfo;
  EDegreeType *myedegrees;
  idxtype *htable;

  cgraph = graph->coarser;
  cwhere = cgraph->where;
  crinfo = cgraph->rinfo;

  nvtxs = graph->nvtxs;
  cmap = graph->cmap;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  adjwgtsum = graph->adjwgtsum;

  MocAllocateKWayPartitionMemory(ctrl, graph, nparts);
  where = graph->where;
  rinfo = graph->rinfo;
  bndind = graph->bndind;
  bndptr = idxset(nvtxs, -1, graph->bndptr);

  /* Go through and project partition and compute id/ed for the nodes */
  for (i=0; i<nvtxs; i++) {
    k = cmap[i];
    where[i] = cwhere[k];
    cmap[i] = crinfo[k].ed;  /* For optimization */
  }

  htable = idxset(nparts, -1, idxwspacemalloc(ctrl, nparts));

  ctrl->wspace.cdegree = 0;
  for (nbnd=0, i=0; i<nvtxs; i++) {
    me = where[i];

    myrinfo = rinfo+i;
    myrinfo->id = myrinfo->ed = myrinfo->ndegrees = 0;
    myrinfo->edegrees = NULL;

    myrinfo->id = adjwgtsum[i];

    if (cmap[i] > 0) { /* If it is an interface node. Note cmap[i] = crinfo[cmap[i]].ed */
      istart = xadj[i];
      iend = xadj[i+1];

      myedegrees = myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;
      ctrl->wspace.cdegree += iend-istart;

      ndegrees = 0;
      for (j=istart; j<iend; j++) {
        other = where[adjncy[j]];
        if (me != other) {
          myrinfo->ed += adjwgt[j];
          if ((k = htable[other]) == -1) {
            htable[other] = ndegrees;
            myedegrees[ndegrees].pid = other;
            myedegrees[ndegrees++].ed = adjwgt[j];
          }
          else {
            myedegrees[k].ed += adjwgt[j];
          }
        }
      }
      myrinfo->id -= myrinfo->ed;

      /* Remove space for edegrees if it was interior */
      if (myrinfo->ed == 0) { 
        myrinfo->edegrees = NULL;
        ctrl->wspace.cdegree -= iend-istart;
      }
      else {
        if (myrinfo->ed-myrinfo->id >= 0) 
          BNDInsert(nbnd, bndind, bndptr, i); 

        myrinfo->ndegrees = ndegrees;

        for (j=0; j<ndegrees; j++)
          htable[myedegrees[j].pid] = -1;
      }
    }
  }

  scopy(graph->ncon*nparts, cgraph->npwgts, graph->npwgts);
  graph->mincut = cgraph->mincut;
  graph->nbnd = nbnd;

  FreeGraph(graph->coarser);
  graph->coarser = NULL;

  idxwspacefree(ctrl, nparts);

  ASSERT(CheckBnd2(graph));

}
예제 #8
0
/*************************************************************************
* This function takes a graph and a bisection and splits it into two graphs.
* It relies on the fact that adjwgt is all set to 1.
**************************************************************************/
int SplitGraphOrderCC(CtrlType *ctrl, GraphType *graph, GraphType *sgraphs, int ncmps, idxtype *cptr, idxtype *cind)
{
  int i, ii, iii, j, k, l, istart, iend, mypart, nvtxs, snvtxs, snedges;
  idxtype *xadj, *vwgt, *adjncy, *adjwgt, *adjwgtsum, *label, *where, *bndptr, *bndind;
  idxtype *sxadj, *svwgt, *sadjncy, *sadjwgt, *sadjwgtsum, *slabel;
  idxtype *rename;
  idxtype *auxadjncy, *auxadjwgt;

  IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->SplitTmr));

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  vwgt = graph->vwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  adjwgtsum = graph->adjwgtsum;
  label = graph->label;
  where = graph->where;
  bndptr = graph->bndptr;
  bndind = graph->bndind;
  ASSERT(bndptr != NULL);

  /* Go and use bndptr to also mark the boundary nodes in the two partitions */
  for (ii=0; ii<graph->nbnd; ii++) {
    i = bndind[ii];
    for (j=xadj[i]; j<xadj[i+1]; j++)
      bndptr[adjncy[j]] = 1;
  }

  rename = idxwspacemalloc(ctrl, nvtxs);
  
  /* Go and split the graph a component at a time */
  for (iii=0; iii<ncmps; iii++) {
    RandomPermute(cptr[iii+1]-cptr[iii], cind+cptr[iii], 0);
    snvtxs = snedges = 0;
    for (j=cptr[iii]; j<cptr[iii+1]; j++) {
      i = cind[j];
      rename[i] = snvtxs++;
      snedges += xadj[i+1]-xadj[i];
    }

    SetUpSplitGraph(graph, sgraphs+iii, snvtxs, snedges);
    sxadj = sgraphs[iii].xadj;
    svwgt = sgraphs[iii].vwgt;
    sadjwgtsum = sgraphs[iii].adjwgtsum;
    sadjncy = sgraphs[iii].adjncy;
    sadjwgt = sgraphs[iii].adjwgt;
    slabel = sgraphs[iii].label;

    snvtxs = snedges = sxadj[0] = 0;
    for (ii=cptr[iii]; ii<cptr[iii+1]; ii++) {
      i = cind[ii];

      istart = xadj[i];
      iend = xadj[i+1];
      if (bndptr[i] == -1) { /* This is an interior vertex */
        auxadjncy = sadjncy + snedges - istart;
        auxadjwgt = sadjwgt + snedges - istart;
        for(j=istart; j<iend; j++) 
          auxadjncy[j] = adjncy[j];
        snedges += iend-istart;
      }
      else {
        l = snedges;
        for (j=istart; j<iend; j++) {
          k = adjncy[j];
          if (where[k] != 2) 
            sadjncy[l++] = k;
        }
        snedges = l;
      }

      svwgt[snvtxs] = vwgt[i];
      sadjwgtsum[snvtxs] = snedges-sxadj[snvtxs];
      slabel[snvtxs] = label[i];
      sxadj[++snvtxs] = snedges;
    }

    idxset(snedges, 1, sadjwgt);
    for (i=0; i<snedges; i++) 
      sadjncy[i] = rename[sadjncy[i]];

    sgraphs[iii].nvtxs = snvtxs;
    sgraphs[iii].nedges = snedges;
    sgraphs[iii].ncon = 1;

    if (snvtxs < MMDSWITCH)
      sgraphs[iii].adjwgt = NULL;  /* A marker to call MMD on the driver */
  }

  IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->SplitTmr));

  idxwspacefree(ctrl, nvtxs);

  return ncmps;

}
예제 #9
0
파일: sfm.c 프로젝트: NickDaniil/structured
/*************************************************************************
* This function performs a node-based FM refinement. This is the 
* one-way version 
**************************************************************************/
void FM_2WayNodeRefine_OneSided(CtrlType *ctrl, GraphType *graph, float ubfactor, int npasses)
{
  int i, ii, j, k, jj, kk, nvtxs, nbnd, nswaps, nmind;
  idxtype *xadj, *vwgt, *adjncy, *where, *pwgts, *edegrees, *bndind, *bndptr;
  idxtype *mptr, *mind, *swaps, *perm;
  PQueueType parts; 
  NRInfoType *rinfo;
  int higain, oldgain, mincut, initcut, mincutorder;	
  int pass, to, other, limit;
  int badmaxpwgt, mindiff, newdiff;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  vwgt = graph->vwgt;

  bndind = graph->bndind;
  bndptr = graph->bndptr;
  where = graph->where;
  pwgts = graph->pwgts;
  rinfo = graph->nrinfo;

  PQueueInit(ctrl, &parts, nvtxs, ComputeMaxNodeGain(nvtxs, xadj, adjncy, vwgt));

  perm = idxwspacemalloc(ctrl, nvtxs);
  swaps = idxwspacemalloc(ctrl, nvtxs);
  mptr = idxwspacemalloc(ctrl, nvtxs);
  mind = idxwspacemalloc(ctrl, nvtxs+1);

  IFSET(ctrl->dbglvl, DBG_REFINE,
    printf("Partitions-N1: [%6d %6d] Nv-Nb[%6d %6d]. ISep: %6d\n", pwgts[0], pwgts[1], graph->nvtxs, graph->nbnd, graph->mincut));

  badmaxpwgt = (int)(ubfactor*(pwgts[0]+pwgts[1]+pwgts[2])/2);

  to = (pwgts[0] < pwgts[1] ? 1 : 0);
  for (pass=0; pass<npasses; pass++) {
    other = to; 
    to = (to+1)%2;

    PQueueReset(&parts);

    mincutorder = -1;
    initcut = mincut = graph->mincut;
    nbnd = graph->nbnd;

    RandomPermute(nbnd, perm, 1);
    for (ii=0; ii<nbnd; ii++) {
      i = bndind[perm[ii]];
      ASSERT(where[i] == 2);
      PQueueInsert(&parts, i, vwgt[i]-rinfo[i].edegrees[other]);
    }

    ASSERT(CheckNodeBnd(graph, nbnd));
    ASSERT(CheckNodePartitionParams(graph));

    limit = (ctrl->oflags&OFLAG_COMPRESS ? amin(5*nbnd, 400) : amin(2*nbnd, 300));

    /******************************************************
    * Get into the FM loop
    *******************************************************/
    mptr[0] = nmind = 0;
    mindiff = abs(pwgts[0]-pwgts[1]);
    for (nswaps=0; nswaps<nvtxs; nswaps++) {

      if ((higain = PQueueGetMax(&parts)) == -1)
        break;

      ASSERT(bndptr[higain] != -1);

      if (pwgts[to]+vwgt[higain] > badmaxpwgt)
        break;  /* No point going any further. Balance will be bad */

      pwgts[2] -= (vwgt[higain]-rinfo[higain].edegrees[other]);

      newdiff = abs(pwgts[to]+vwgt[higain] - (pwgts[other]-rinfo[higain].edegrees[other]));
      if (pwgts[2] < mincut || (pwgts[2] == mincut && newdiff < mindiff)) {
        mincut = pwgts[2];
        mincutorder = nswaps;
        mindiff = newdiff;
      }
      else {
        if (nswaps - mincutorder > limit) {
          pwgts[2] += (vwgt[higain]-rinfo[higain].edegrees[other]);
          break; /* No further improvement, break out */
        }
      }

      BNDDelete(nbnd, bndind, bndptr, higain);
      pwgts[to] += vwgt[higain];
      where[higain] = to;
      swaps[nswaps] = higain;  


      /**********************************************************
      * Update the degrees of the affected nodes
      ***********************************************************/
      for (j=xadj[higain]; j<xadj[higain+1]; j++) {
        k = adjncy[j];
        if (where[k] == 2) { /* For the in-separator vertices modify their edegree[to] */
          rinfo[k].edegrees[to] += vwgt[higain];
        }
        else if (where[k] == other) { /* This vertex is pulled into the separator */
          ASSERTP(bndptr[k] == -1, ("%d %d %d\n", k, bndptr[k], where[k]));
          BNDInsert(nbnd, bndind, bndptr, k);

          mind[nmind++] = k;  /* Keep track for rollback */
          where[k] = 2;
          pwgts[other] -= vwgt[k];

          edegrees = rinfo[k].edegrees;
          edegrees[0] = edegrees[1] = 0;
          for (jj=xadj[k]; jj<xadj[k+1]; jj++) {
            kk = adjncy[jj];
            if (where[kk] != 2) 
              edegrees[where[kk]] += vwgt[kk];
            else {
              oldgain = vwgt[kk]-rinfo[kk].edegrees[other];
              rinfo[kk].edegrees[other] -= vwgt[k];

              /* Since the moves are one-sided this vertex has not been moved yet */
              PQueueUpdateUp(&parts, kk, oldgain, oldgain+vwgt[k]); 
            }
          }

          /* Insert the new vertex into the priority queue. Safe due to one-sided moves */
          PQueueInsert(&parts, k, vwgt[k]-edegrees[other]);
        }
      }
      mptr[nswaps+1] = nmind;


      IFSET(ctrl->dbglvl, DBG_MOVEINFO,
            printf("Moved %6d to %3d, Gain: %5d [%5d] \t[%5d %5d %5d] [%3d %2d]\n", 
                       higain, to, (vwgt[higain]-rinfo[higain].edegrees[other]), vwgt[higain], pwgts[0], pwgts[1], pwgts[2], nswaps, limit));

    }


    /****************************************************************
    * Roll back computation 
    *****************************************************************/
    for (nswaps--; nswaps>mincutorder; nswaps--) {
      higain = swaps[nswaps];

      ASSERT(CheckNodePartitionParams(graph));
      ASSERT(where[higain] == to);

      INC_DEC(pwgts[2], pwgts[to], vwgt[higain]);
      where[higain] = 2;
      BNDInsert(nbnd, bndind, bndptr, higain);

      edegrees = rinfo[higain].edegrees;
      edegrees[0] = edegrees[1] = 0;
      for (j=xadj[higain]; j<xadj[higain+1]; j++) {
        k = adjncy[j];
        if (where[k] == 2) 
          rinfo[k].edegrees[to] -= vwgt[higain];
        else
          edegrees[where[k]] += vwgt[k];
      }

      /* Push nodes out of the separator */
      for (j=mptr[nswaps]; j<mptr[nswaps+1]; j++) {
        k = mind[j];
        ASSERT(where[k] == 2);
        where[k] = other;
        INC_DEC(pwgts[other], pwgts[2], vwgt[k]);
        BNDDelete(nbnd, bndind, bndptr, k);
        for (jj=xadj[k]; jj<xadj[k+1]; jj++) {
          kk = adjncy[jj];
          if (where[kk] == 2) 
            rinfo[kk].edegrees[other] += vwgt[k];
        }
      }
    }

    ASSERT(mincut == pwgts[2]);

    IFSET(ctrl->dbglvl, DBG_REFINE,
      printf("\tMinimum sep: %6d at %5d, PWGTS: [%6d %6d], NBND: %6d\n", mincut, mincutorder, pwgts[0], pwgts[1], nbnd));

    graph->mincut = mincut;
    graph->nbnd = nbnd;

    if (pass%2 == 1 && (mincutorder == -1 || mincut >= initcut))
      break;
  }

  PQueueFree(ctrl, &parts);

  idxwspacefree(ctrl, nvtxs+1);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
}
예제 #10
0
파일: sfm.c 프로젝트: NickDaniil/structured
/*************************************************************************
* This function performs a node-based FM refinement 
**************************************************************************/
void FM_2WayNodeBalance(CtrlType *ctrl, GraphType *graph, float ubfactor)
{
  int i, ii, j, k, jj, kk, nvtxs, nbnd, nswaps;
  idxtype *xadj, *vwgt, *adjncy, *where, *pwgts, *edegrees, *bndind, *bndptr;
  idxtype *perm, *moved;
  PQueueType parts; 
  NRInfoType *rinfo;
  int higain, oldgain;	
  int pass, to, other;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  vwgt = graph->vwgt;

  bndind = graph->bndind;
  bndptr = graph->bndptr;
  where = graph->where;
  pwgts = graph->pwgts;
  rinfo = graph->nrinfo;

  if (abs(pwgts[0]-pwgts[1]) < (int)((ubfactor-1.0)*(pwgts[0]+pwgts[1])))
    return;
  if (abs(pwgts[0]-pwgts[1]) < 3*idxsum(nvtxs, vwgt)/nvtxs)
    return;

  to = (pwgts[0] < pwgts[1] ? 0 : 1); 
  other = (to+1)%2;

  PQueueInit(ctrl, &parts, nvtxs, ComputeMaxNodeGain(nvtxs, xadj, adjncy, vwgt));

  perm = idxwspacemalloc(ctrl, nvtxs);
  moved = idxset(nvtxs, -1, idxwspacemalloc(ctrl, nvtxs));

  IFSET(ctrl->dbglvl, DBG_REFINE,
    printf("Partitions: [%6d %6d] Nv-Nb[%6d %6d]. ISep: %6d [B]\n", pwgts[0], pwgts[1], graph->nvtxs, graph->nbnd, graph->mincut));

  nbnd = graph->nbnd;
  RandomPermute(nbnd, perm, 1);
  for (ii=0; ii<nbnd; ii++) {
    i = bndind[perm[ii]];
    ASSERT(where[i] == 2);
    PQueueInsert(&parts, i, vwgt[i]-rinfo[i].edegrees[other]);
  }

  ASSERT(CheckNodeBnd(graph, nbnd));
  ASSERT(CheckNodePartitionParams(graph));

  /******************************************************
  * Get into the FM loop
  *******************************************************/
  for (nswaps=0; nswaps<nvtxs; nswaps++) {
    if ((higain = PQueueGetMax(&parts)) == -1)
      break;

    moved[higain] = 1;

    if (pwgts[other] - rinfo[higain].edegrees[other] < (pwgts[0]+pwgts[1])/2) 
      continue;
#ifdef XXX
    if (pwgts[other] - rinfo[higain].edegrees[other] < pwgts[to]+vwgt[higain]) 
      break;
#endif

    ASSERT(bndptr[higain] != -1);

    pwgts[2] -= (vwgt[higain]-rinfo[higain].edegrees[other]);

    BNDDelete(nbnd, bndind, bndptr, higain);
    pwgts[to] += vwgt[higain];
    where[higain] = to;

    IFSET(ctrl->dbglvl, DBG_MOVEINFO,
          printf("Moved %6d to %3d, Gain: %3d, \t[%5d %5d %5d]\n", higain, to, vwgt[higain]-rinfo[higain].edegrees[other], pwgts[0], pwgts[1], pwgts[2]));


    /**********************************************************
    * Update the degrees of the affected nodes
    ***********************************************************/
    for (j=xadj[higain]; j<xadj[higain+1]; j++) {
      k = adjncy[j];
      if (where[k] == 2) { /* For the in-separator vertices modify their edegree[to] */
        rinfo[k].edegrees[to] += vwgt[higain];
      }
      else if (where[k] == other) { /* This vertex is pulled into the separator */
        ASSERTP(bndptr[k] == -1, ("%d %d %d\n", k, bndptr[k], where[k]));
        BNDInsert(nbnd, bndind, bndptr, k);

        where[k] = 2;
        pwgts[other] -= vwgt[k];

        edegrees = rinfo[k].edegrees;
        edegrees[0] = edegrees[1] = 0;
        for (jj=xadj[k]; jj<xadj[k+1]; jj++) {
          kk = adjncy[jj];
          if (where[kk] != 2) 
            edegrees[where[kk]] += vwgt[kk];
          else {
            ASSERT(bndptr[kk] != -1);
            oldgain = vwgt[kk]-rinfo[kk].edegrees[other];
            rinfo[kk].edegrees[other] -= vwgt[k];

            if (moved[kk] == -1)
              PQueueUpdateUp(&parts, kk, oldgain, oldgain+vwgt[k]);
          }
        }

        /* Insert the new vertex into the priority queue */
        PQueueInsert(&parts, k, vwgt[k]-edegrees[other]);
      }
    }

    if (pwgts[to] > pwgts[other])
      break;
  }

  IFSET(ctrl->dbglvl, DBG_REFINE,
    printf("\tBalanced sep: %6d at %4d, PWGTS: [%6d %6d], NBND: %6d\n", pwgts[2], nswaps, pwgts[0], pwgts[1], nbnd));

  graph->mincut = pwgts[2];
  graph->nbnd = nbnd;


  PQueueFree(ctrl, &parts);

  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
}
예제 #11
0
파일: sfm.c 프로젝트: NickDaniil/structured
/*************************************************************************
* This function performs a node-based FM refinement 
**************************************************************************/
void FM_2WayNodeRefineEqWgt(CtrlType *ctrl, GraphType *graph, int npasses)
{
  int i, ii, j, k, jj, kk, nvtxs, nbnd, nswaps, nmind;
  idxtype *xadj, *vwgt, *adjncy, *where, *pwgts, *edegrees, *bndind, *bndptr;
  idxtype *mptr, *mind, *moved, *swaps, *perm;
  PQueueType parts[2]; 
  NRInfoType *rinfo;
  int higain, oldgain, mincut, initcut, mincutorder;	
  int pass, to, other, limit;
  int mindiff, newdiff;
  int u[2], g[2];

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  vwgt = graph->vwgt;

  bndind = graph->bndind;
  bndptr = graph->bndptr;
  where = graph->where;
  pwgts = graph->pwgts;
  rinfo = graph->nrinfo;


  i = ComputeMaxNodeGain(nvtxs, xadj, adjncy, vwgt);
  PQueueInit(ctrl, &parts[0], nvtxs, i);
  PQueueInit(ctrl, &parts[1], nvtxs, i);

  moved = idxwspacemalloc(ctrl, nvtxs);
  swaps = idxwspacemalloc(ctrl, nvtxs);
  mptr = idxwspacemalloc(ctrl, nvtxs+1);
  mind = idxwspacemalloc(ctrl, nvtxs);
  perm = idxwspacemalloc(ctrl, nvtxs);

  IFSET(ctrl->dbglvl, DBG_REFINE,
    printf("Partitions: [%6d %6d] Nv-Nb[%6d %6d]. ISep: %6d\n", pwgts[0], pwgts[1], graph->nvtxs, graph->nbnd, graph->mincut));

  for (pass=0; pass<npasses; pass++) {
    idxset(nvtxs, -1, moved);
    PQueueReset(&parts[0]);
    PQueueReset(&parts[1]);

    mincutorder = -1;
    initcut = mincut = graph->mincut;
    nbnd = graph->nbnd;

    RandomPermute(nbnd, perm, 1);
    for (ii=0; ii<nbnd; ii++) {
      i = bndind[perm[ii]];
      ASSERT(where[i] == 2);
      PQueueInsert(&parts[0], i, vwgt[i]-rinfo[i].edegrees[1]);
      PQueueInsert(&parts[1], i, vwgt[i]-rinfo[i].edegrees[0]);
    }

    ASSERT(CheckNodeBnd(graph, nbnd));
    ASSERT(CheckNodePartitionParams(graph));

    limit = (ctrl->oflags&OFLAG_COMPRESS ? amin(5*nbnd, 400) : amin(2*nbnd, 300));

    /******************************************************
    * Get into the FM loop
    *******************************************************/
    mptr[0] = nmind = 0;
    mindiff = abs(pwgts[0]-pwgts[1]);
    to = (pwgts[0] < pwgts[1] ? 0 : 1);
    for (nswaps=0; nswaps<nvtxs; nswaps++) {
      to = (pwgts[0] < pwgts[1] ? 0 : 1);

      if (pwgts[0] == pwgts[1]) {
        u[0] = PQueueSeeMax(&parts[0]);  
        u[1] = PQueueSeeMax(&parts[1]);
        if (u[0] != -1 && u[1] != -1) {
          g[0] = vwgt[u[0]]-rinfo[u[0]].edegrees[1];
          g[1] = vwgt[u[1]]-rinfo[u[1]].edegrees[0];

          to = (g[0] > g[1] ? 0 : (g[0] < g[1] ? 1 : pass%2)); 
        }
      }
      other = (to+1)%2;

      if ((higain = PQueueGetMax(&parts[to])) == -1)
        break;

      if (moved[higain] == -1) /* Delete if it was in the separator originally */
        PQueueDelete(&parts[other], higain, vwgt[higain]-rinfo[higain].edegrees[to]);

      ASSERT(bndptr[higain] != -1);

      pwgts[2] -= (vwgt[higain]-rinfo[higain].edegrees[other]);

      newdiff = abs(pwgts[to]+vwgt[higain] - (pwgts[other]-rinfo[higain].edegrees[other]));
      if (pwgts[2] < mincut || (pwgts[2] == mincut && newdiff < mindiff)) {
        mincut = pwgts[2];
        mincutorder = nswaps;
        mindiff = newdiff;
      }
      else {
        if (nswaps - mincutorder > limit) {
          pwgts[2] += (vwgt[higain]-rinfo[higain].edegrees[other]);
          break; /* No further improvement, break out */
        }
      }

      BNDDelete(nbnd, bndind, bndptr, higain);
      pwgts[to] += vwgt[higain];
      where[higain] = to;
      moved[higain] = nswaps;
      swaps[nswaps] = higain;  


      /**********************************************************
      * Update the degrees of the affected nodes
      ***********************************************************/
      for (j=xadj[higain]; j<xadj[higain+1]; j++) {
        k = adjncy[j];
        if (where[k] == 2) { /* For the in-separator vertices modify their edegree[to] */
          oldgain = vwgt[k]-rinfo[k].edegrees[to];
          rinfo[k].edegrees[to] += vwgt[higain];
          if (moved[k] == -1 || moved[k] == -(2+other))
            PQueueUpdate(&parts[other], k, oldgain, oldgain-vwgt[higain]);
        }
        else if (where[k] == other) { /* This vertex is pulled into the separator */
          ASSERTP(bndptr[k] == -1, ("%d %d %d\n", k, bndptr[k], where[k]));
          BNDInsert(nbnd, bndind, bndptr, k);

          mind[nmind++] = k;  /* Keep track for rollback */
          where[k] = 2;
          pwgts[other] -= vwgt[k];

          edegrees = rinfo[k].edegrees;
          edegrees[0] = edegrees[1] = 0;
          for (jj=xadj[k]; jj<xadj[k+1]; jj++) {
            kk = adjncy[jj];
            if (where[kk] != 2) 
              edegrees[where[kk]] += vwgt[kk];
            else {
              oldgain = vwgt[kk]-rinfo[kk].edegrees[other];
              rinfo[kk].edegrees[other] -= vwgt[k];
              if (moved[kk] == -1 || moved[kk] == -(2+to))
                PQueueUpdate(&parts[to], kk, oldgain, oldgain+vwgt[k]);
            }
          }

          /* Insert the new vertex into the priority queue. Only one side! */
          if (moved[k] == -1) {
            PQueueInsert(&parts[to], k, vwgt[k]-edegrees[other]);
            moved[k] = -(2+to);
          }
        }
      }
      mptr[nswaps+1] = nmind;

      IFSET(ctrl->dbglvl, DBG_MOVEINFO,
            printf("Moved %6d to %3d, Gain: %5d [%5d] [%4d %4d] \t[%5d %5d %5d]\n", higain, to, g[to], g[other], vwgt[u[to]], vwgt[u[other]], pwgts[0], pwgts[1], pwgts[2]));

    }


    /****************************************************************
    * Roll back computation 
    *****************************************************************/
    for (nswaps--; nswaps>mincutorder; nswaps--) {
      higain = swaps[nswaps];

      ASSERT(CheckNodePartitionParams(graph));

      to = where[higain];
      other = (to+1)%2;
      INC_DEC(pwgts[2], pwgts[to], vwgt[higain]);
      where[higain] = 2;
      BNDInsert(nbnd, bndind, bndptr, higain);

      edegrees = rinfo[higain].edegrees;
      edegrees[0] = edegrees[1] = 0;
      for (j=xadj[higain]; j<xadj[higain+1]; j++) {
        k = adjncy[j];
        if (where[k] == 2) 
          rinfo[k].edegrees[to] -= vwgt[higain];
        else
          edegrees[where[k]] += vwgt[k];
      }

      /* Push nodes out of the separator */
      for (j=mptr[nswaps]; j<mptr[nswaps+1]; j++) {
        k = mind[j];
        ASSERT(where[k] == 2);
        where[k] = other;
        INC_DEC(pwgts[other], pwgts[2], vwgt[k]);
        BNDDelete(nbnd, bndind, bndptr, k);
        for (jj=xadj[k]; jj<xadj[k+1]; jj++) {
          kk = adjncy[jj];
          if (where[kk] == 2) 
            rinfo[kk].edegrees[other] += vwgt[k];
        }
      }
    }

    ASSERT(mincut == pwgts[2]);

    IFSET(ctrl->dbglvl, DBG_REFINE,
      printf("\tMinimum sep: %6d at %5d, PWGTS: [%6d %6d], NBND: %6d\n", mincut, mincutorder, pwgts[0], pwgts[1], nbnd));

    graph->mincut = mincut;
    graph->nbnd = nbnd;

    if (mincutorder == -1 || mincut >= initcut)
      break;
  }

  PQueueFree(ctrl, &parts[0]);
  PQueueFree(ctrl, &parts[1]);

  idxwspacefree(ctrl, nvtxs+1);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
}
예제 #12
0
파일: fm.c 프로젝트: BrainSoft/fieldtrip
/*************************************************************************
* This function performs an edge-based FM refinement
**************************************************************************/
void FM_2WayEdgeRefine(CtrlType *ctrl, GraphType *graph, int *tpwgts, int npasses)
{
  int i, ii, j, k, kwgt, nvtxs, nbnd, nswaps, from, to, pass, me, limit, tmp;
  idxtype *xadj, *vwgt, *adjncy, *adjwgt, *where, *id, *ed, *bndptr, *bndind, *pwgts;
  idxtype *moved, *swaps, *perm;
  PQueueType parts[2];
  int higain, oldgain, mincut, mindiff, origdiff, initcut, newcut, mincutorder, avgvwgt;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  vwgt = graph->vwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  where = graph->where;
  id = graph->id;
  ed = graph->ed;
  pwgts = graph->pwgts;
  bndptr = graph->bndptr;
  bndind = graph->bndind;

  moved = idxwspacemalloc(ctrl, nvtxs);
  swaps = idxwspacemalloc(ctrl, nvtxs);
  perm = idxwspacemalloc(ctrl, nvtxs);

  limit = amin(amax(0.01*nvtxs, 15), 100);
  avgvwgt = amin((pwgts[0]+pwgts[1])/20, 2*(pwgts[0]+pwgts[1])/nvtxs);

  tmp = graph->adjwgtsum[idxamax(nvtxs, graph->adjwgtsum)];
  PQueueInit(ctrl, &parts[0], nvtxs, tmp);
  PQueueInit(ctrl, &parts[1], nvtxs, tmp);

  IFSET(ctrl->dbglvl, DBG_REFINE, 
     printf("Partitions: [%6d %6d] T[%6d %6d], Nv-Nb[%6d %6d]. ICut: %6d\n",
             pwgts[0], pwgts[1], tpwgts[0], tpwgts[1], graph->nvtxs, graph->nbnd, graph->mincut));

  origdiff = abs(tpwgts[0]-pwgts[0]);
  idxset(nvtxs, -1, moved);
  for (pass=0; pass<npasses; pass++) { /* Do a number of passes */
    PQueueReset(&parts[0]);
    PQueueReset(&parts[1]);

    mincutorder = -1;
    newcut = mincut = initcut = graph->mincut;
    mindiff = abs(tpwgts[0]-pwgts[0]);

    ASSERT(ComputeCut(graph, where) == graph->mincut);
    ASSERT(CheckBnd(graph));

    /* Insert boundary nodes in the priority queues */
    nbnd = graph->nbnd;
    RandomPermute(nbnd, perm, 1);
    for (ii=0; ii<nbnd; ii++) {
      i = perm[ii];
      ASSERT(ed[bndind[i]] > 0 || id[bndind[i]] == 0);
      ASSERT(bndptr[bndind[i]] != -1);
      PQueueInsert(&parts[where[bndind[i]]], bndind[i], ed[bndind[i]]-id[bndind[i]]);
    }

    for (nswaps=0; nswaps<nvtxs; nswaps++) {
      from = (tpwgts[0]-pwgts[0] < tpwgts[1]-pwgts[1] ? 0 : 1);
      to = (from+1)%2;

      if ((higain = PQueueGetMax(&parts[from])) == -1)
        break;
      ASSERT(bndptr[higain] != -1);

      newcut -= (ed[higain]-id[higain]);
      INC_DEC(pwgts[to], pwgts[from], vwgt[higain]);

      if ((newcut < mincut && abs(tpwgts[0]-pwgts[0]) <= origdiff+avgvwgt) || 
          (newcut == mincut && abs(tpwgts[0]-pwgts[0]) < mindiff)) {
        mincut = newcut;
        mindiff = abs(tpwgts[0]-pwgts[0]);
        mincutorder = nswaps;
      }
      else if (nswaps-mincutorder > limit) { /* We hit the limit, undo last move */
        newcut += (ed[higain]-id[higain]);
        INC_DEC(pwgts[from], pwgts[to], vwgt[higain]);
        break;
      }

      where[higain] = to;
      moved[higain] = nswaps;
      swaps[nswaps] = higain;

      IFSET(ctrl->dbglvl, DBG_MOVEINFO, 
        printf("Moved %6d from %d. [%3d %3d] %5d [%4d %4d]\n", higain, from, ed[higain]-id[higain], vwgt[higain], newcut, pwgts[0], pwgts[1]));

      /**************************************************************
      * Update the id[i]/ed[i] values of the affected nodes
      ***************************************************************/
      SWAP(id[higain], ed[higain], tmp);
      if (ed[higain] == 0 && xadj[higain] < xadj[higain+1]) 
        BNDDelete(nbnd, bndind,  bndptr, higain);

      for (j=xadj[higain]; j<xadj[higain+1]; j++) {
        k = adjncy[j];
        oldgain = ed[k]-id[k];

        kwgt = (to == where[k] ? adjwgt[j] : -adjwgt[j]);
        INC_DEC(id[k], ed[k], kwgt);

        /* Update its boundary information and queue position */
        if (bndptr[k] != -1) { /* If k was a boundary vertex */
          if (ed[k] == 0) { /* Not a boundary vertex any more */
            BNDDelete(nbnd, bndind, bndptr, k);
            if (moved[k] == -1)  /* Remove it if in the queues */
              PQueueDelete(&parts[where[k]], k, oldgain);
          }
          else { /* If it has not been moved, update its position in the queue */
            if (moved[k] == -1)
              PQueueUpdate(&parts[where[k]], k, oldgain, ed[k]-id[k]);
          }
        }
        else {
          if (ed[k] > 0) {  /* It will now become a boundary vertex */
            BNDInsert(nbnd, bndind, bndptr, k);
            if (moved[k] == -1) 
              PQueueInsert(&parts[where[k]], k, ed[k]-id[k]);
          }
        }
      }

    }


    /****************************************************************
    * Roll back computations
    *****************************************************************/
    for (i=0; i<nswaps; i++)
      moved[swaps[i]] = -1;  /* reset moved array */
    for (nswaps--; nswaps>mincutorder; nswaps--) {
      higain = swaps[nswaps];

      to = where[higain] = (where[higain]+1)%2;
      SWAP(id[higain], ed[higain], tmp);
      if (ed[higain] == 0 && bndptr[higain] != -1 && xadj[higain] < xadj[higain+1])
        BNDDelete(nbnd, bndind,  bndptr, higain);
      else if (ed[higain] > 0 && bndptr[higain] == -1)
        BNDInsert(nbnd, bndind,  bndptr, higain);

      INC_DEC(pwgts[to], pwgts[(to+1)%2], vwgt[higain]);
      for (j=xadj[higain]; j<xadj[higain+1]; j++) {
        k = adjncy[j];

        kwgt = (to == where[k] ? adjwgt[j] : -adjwgt[j]);
        INC_DEC(id[k], ed[k], kwgt);

        if (bndptr[k] != -1 && ed[k] == 0)
          BNDDelete(nbnd, bndind, bndptr, k);
        if (bndptr[k] == -1 && ed[k] > 0)
          BNDInsert(nbnd, bndind, bndptr, k);
      }
    }

    IFSET(ctrl->dbglvl, DBG_REFINE, 
      printf("\tMinimum cut: %6d at %5d, PWGTS: [%6d %6d], NBND: %6d\n", mincut, mincutorder, pwgts[0], pwgts[1], nbnd));

    graph->mincut = mincut;
    graph->nbnd = nbnd;

    if (mincutorder == -1 || mincut == initcut)
      break;
  }

  PQueueFree(ctrl, &parts[0]);
  PQueueFree(ctrl, &parts[1]);

  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);

}
예제 #13
0
/*************************************************************************
* This function takes a bisection and constructs a minimum weight vertex 
* separator out of it. It uses an unweighted minimum-cover algorithm
* followed by node-based separator refinement.
**************************************************************************/
void ConstructMinCoverSeparator0(CtrlType *ctrl, GraphType *graph, float ubfactor)
{
  int i, ii, j, jj, k, l, nvtxs, nbnd, bnvtxs[3], bnedges[2], csize;
  idxtype *xadj, *adjncy, *bxadj, *badjncy;
  idxtype *where, *bndind, *bndptr, *vmap, *ivmap, *cover;


  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  adjncy = graph->adjncy;

  nbnd = graph->nbnd;
  bndind = graph->bndind;
  bndptr = graph->bndptr;
  where = graph->where;

  vmap = idxwspacemalloc(ctrl, nvtxs);
  ivmap = idxwspacemalloc(ctrl, nbnd);
  cover = idxwspacemalloc(ctrl, nbnd);

  if (nbnd > 0) {
    /* Go through the boundary and determine the sizes of the bipartite graph */
    bnvtxs[0] = bnvtxs[1] = bnedges[0] = bnedges[1] = 0;
    for (i=0; i<nbnd; i++) {
      j = bndind[i];
      k = where[j];
      if (xadj[j+1]-xadj[j] > 0) {
        bnvtxs[k]++;
        bnedges[k] += xadj[j+1]-xadj[j];
      }
    }

    bnvtxs[2] = bnvtxs[0]+bnvtxs[1];
    bnvtxs[1] = bnvtxs[0];
    bnvtxs[0] = 0;

    bxadj = idxmalloc(bnvtxs[2]+1, "ConstructMinCoverSeparator: bxadj");
    badjncy = idxmalloc(bnedges[0]+bnedges[1]+1, "ConstructMinCoverSeparator: badjncy");

    /* Construct the ivmap and vmap */
    ASSERT(idxset(nvtxs, -1, vmap) == vmap);
    for (i=0; i<nbnd; i++) {
      j = bndind[i];
      k = where[j];
      if (xadj[j+1]-xadj[j] > 0) {
        vmap[j] = bnvtxs[k];
        ivmap[bnvtxs[k]++] = j;
      }
    }

    /* OK, go through and put the vertices of each part starting from 0 */
    bnvtxs[1] = bnvtxs[0];
    bnvtxs[0] = 0;
    bxadj[0] = l = 0;
    for (k=0; k<2; k++) {
      for (ii=0; ii<nbnd; ii++) {
        i = bndind[ii];
        if (where[i] == k && xadj[i] < xadj[i+1]) {
          for (j=xadj[i]; j<xadj[i+1]; j++) {
            jj = adjncy[j];
            if (where[jj] != k) {
              ASSERT(bndptr[jj] != -1); 
              ASSERTP(vmap[jj] != -1, ("%d %d %d\n", jj, vmap[jj], graph->bndptr[jj]));
              badjncy[l++] = vmap[jj];
            }
          }
          bxadj[++bnvtxs[k]] = l;
        }
      }
    }

    ASSERT(l <= bnedges[0]+bnedges[1]);

    MinCover(bxadj, badjncy, bnvtxs[0], bnvtxs[1], cover, &csize);

    IFSET(ctrl->dbglvl, DBG_SEPINFO,
      printf("Nvtxs: %6d, [%5d %5d], Cut: %6d, SS: [%6d %6d], Cover: %6d\n", nvtxs, graph->pwgts[0], graph->pwgts[1], graph->mincut, bnvtxs[0], bnvtxs[1]-bnvtxs[0], csize));

    for (i=0; i<csize; i++) {
      j = ivmap[cover[i]];
      where[j] = 2;
    }

    GKfree(&bxadj, &badjncy, LTERM);

    for (i=0; i<nbnd; i++)
      bndptr[bndind[i]] = -1;
    for (nbnd=i=0; i<nvtxs; i++) {
      if (where[i] == 2) {
        bndind[nbnd] = i;
        bndptr[i] = nbnd++;
      }
    }
  }
  else {
    IFSET(ctrl->dbglvl, DBG_SEPINFO,
      printf("Nvtxs: %6d, [%5d %5d], Cut: %6d, SS: [%6d %6d], Cover: %6d\n", nvtxs, graph->pwgts[0], graph->pwgts[1], graph->mincut, 0, 0, 0));
  }

  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, graph->nbnd);
  idxwspacefree(ctrl, graph->nbnd);
  graph->nbnd = nbnd;


  ASSERT(IsSeparable(graph));
}
예제 #14
0
파일: kwayfm.c 프로젝트: davidheryanto/sc14
/*************************************************************************
* This function performs k-way refinement
**************************************************************************/
void Greedy_KWayEdgeBalance(CtrlType *ctrl, GraphType *graph, int nparts, floattype *tpwgts, floattype ubfactor, int npasses)
{
  int i, ii, iii, j, jj, k, l, pass, nvtxs, nbnd, tvwgt, myndegrees, oldgain, gain, nmoves; 
  int from, me, to, oldcut, vwgt;
  idxtype *xadj, *adjncy, *adjwgt;
  idxtype *where, *pwgts, *perm, *bndptr, *bndind, *minwgt, *maxwgt, *moved, *itpwgts;
  EDegreeType *myedegrees;
  RInfoType *myrinfo;
  PQueueType queue;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;

  bndind = graph->bndind;
  bndptr = graph->bndptr;

  where = graph->where;
  pwgts = graph->pwgts;
  
  /* Setup the weight intervals of the various subdomains */
  minwgt =  idxwspacemalloc(ctrl, nparts);
  maxwgt = idxwspacemalloc(ctrl, nparts);
  itpwgts = idxwspacemalloc(ctrl, nparts);
  tvwgt = idxsum(nparts, pwgts);
  ASSERT(tvwgt == idxsum(nvtxs, graph->vwgt));

  for (i=0; i<nparts; i++) {
    itpwgts[i] = tpwgts[i]*tvwgt;
    maxwgt[i] = tpwgts[i]*tvwgt*ubfactor;
    minwgt[i] = tpwgts[i]*tvwgt*(1.0/ubfactor);
  }

  perm = idxwspacemalloc(ctrl, nvtxs);
  moved = idxwspacemalloc(ctrl, nvtxs);

  PQueueInit(ctrl, &queue, nvtxs, graph->adjwgtsum[idxamax(nvtxs, graph->adjwgtsum)]);

  IFSET(ctrl->dbglvl, DBG_REFINE,
     printf("Partitions: [%6d %6d]-[%6d %6d], Balance: %5.3f, Nv-Nb[%6d %6d]. Cut: %6d [B]\n",
             pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)], minwgt[0], maxwgt[0], 
             1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nvtxs, graph->nbnd,
             graph->mincut));

  for (pass=0; pass<npasses; pass++) {
    ASSERT(ComputeCut(graph, where) == graph->mincut);

    /* Check to see if things are out of balance, given the tolerance */
    for (i=0; i<nparts; i++) {
      if (pwgts[i] > maxwgt[i])
        break;
    }
    if (i == nparts) /* Things are balanced. Return right away */
      break;

    PQueueReset(&queue);
    idxset(nvtxs, -1, moved);

    oldcut = graph->mincut;
    nbnd = graph->nbnd;

    RandomPermute(nbnd, perm, 1);
    for (ii=0; ii<nbnd; ii++) {
      i = bndind[perm[ii]];
      PQueueInsert(&queue, i, graph->rinfo[i].ed - graph->rinfo[i].id);
      moved[i] = 2;
    }

    nmoves = 0;
    for (;;) {
      if ((i = PQueueGetMax(&queue)) == -1) 
        break;
      moved[i] = 1;

      myrinfo = graph->rinfo+i;
      from = where[i];
      vwgt = graph->vwgt[i];

      if (pwgts[from]-vwgt < minwgt[from]) 
        continue;   /* This cannot be moved! */

      myedegrees = myrinfo->edegrees;
      myndegrees = myrinfo->ndegrees;

      for (k=0; k<myndegrees; k++) {
        to = myedegrees[k].pid;
        if (pwgts[to]+vwgt <= maxwgt[to] || itpwgts[from]*(pwgts[to]+vwgt) <= itpwgts[to]*pwgts[from]) 
          break;
      }
      if (k == myndegrees)
        continue;  /* break out if you did not find a candidate */

      for (j=k+1; j<myndegrees; j++) {
        to = myedegrees[j].pid;
        if (itpwgts[myedegrees[k].pid]*pwgts[to] < itpwgts[to]*pwgts[myedegrees[k].pid]) 
          k = j;
      }

      to = myedegrees[k].pid;

      if (pwgts[from] < maxwgt[from] && pwgts[to] > minwgt[to] && myedegrees[k].ed-myrinfo->id < 0) 
        continue;

      /*=====================================================================
      * If we got here, we can now move the vertex from 'from' to 'to' 
      *======================================================================*/
      graph->mincut -= myedegrees[k].ed-myrinfo->id;

      IFSET(ctrl->dbglvl, DBG_MOVEINFO, printf("\t\tMoving %6d to %3d. Gain: %4d. Cut: %6d\n", i, to, myedegrees[k].ed-myrinfo->id, graph->mincut));

      /* Update where, weight, and ID/ED information of the vertex you moved */
      where[i] = to;
      INC_DEC(pwgts[to], pwgts[from], vwgt);
      myrinfo->ed += myrinfo->id-myedegrees[k].ed;
      SWAP(myrinfo->id, myedegrees[k].ed, j);
      if (myedegrees[k].ed == 0) 
        myedegrees[k] = myedegrees[--myrinfo->ndegrees];
      else
        myedegrees[k].pid = from;

      if (myrinfo->ed == 0)
        BNDDelete(nbnd, bndind, bndptr, i);

      /* Update the degrees of adjacent vertices */
      for (j=xadj[i]; j<xadj[i+1]; j++) {
        ii = adjncy[j];
        me = where[ii];

        myrinfo = graph->rinfo+ii;
        if (myrinfo->edegrees == NULL) {
          myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;
          ctrl->wspace.cdegree += xadj[ii+1]-xadj[ii];
        }
        myedegrees = myrinfo->edegrees;

        ASSERT(CheckRInfo(myrinfo));

        oldgain = (myrinfo->ed-myrinfo->id);

        if (me == from) {
          INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]);

          if (myrinfo->ed > 0 && bndptr[ii] == -1)
            BNDInsert(nbnd, bndind, bndptr, ii);
        }
        else if (me == to) {
          INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]);

          if (myrinfo->ed == 0 && bndptr[ii] != -1)
            BNDDelete(nbnd, bndind, bndptr, ii);
        }

        /* Remove contribution from the .ed of 'from' */
        if (me != from) {
          for (k=0; k<myrinfo->ndegrees; k++) {
            if (myedegrees[k].pid == from) {
              if (myedegrees[k].ed == adjwgt[j])
                myedegrees[k] = myedegrees[--myrinfo->ndegrees];
              else
                myedegrees[k].ed -= adjwgt[j];
              break;
            }
          }
        }

        /* Add contribution to the .ed of 'to' */
        if (me != to) {
          for (k=0; k<myrinfo->ndegrees; k++) {
            if (myedegrees[k].pid == to) {
              myedegrees[k].ed += adjwgt[j];
              break;
            }
          }
          if (k == myrinfo->ndegrees) {
            myedegrees[myrinfo->ndegrees].pid = to;
            myedegrees[myrinfo->ndegrees++].ed = adjwgt[j];
          }
        }

        /* Update the queue */
        if (me == to || me == from) { 
          gain = myrinfo->ed-myrinfo->id;
          if (moved[ii] == 2) {
            if (myrinfo->ed > 0)
              PQueueUpdate(&queue, ii, oldgain, gain);
            else {
              PQueueDelete(&queue, ii, oldgain);
              moved[ii] = -1;
            }
          }
          else if (moved[ii] == -1 && myrinfo->ed > 0) {
            PQueueInsert(&queue, ii, gain);
            moved[ii] = 2;
          }
        } 

        ASSERT(myrinfo->ndegrees <= xadj[ii+1]-xadj[ii]);
        ASSERT(CheckRInfo(myrinfo));
      }
      nmoves++;
    }

    graph->nbnd = nbnd;

    IFSET(ctrl->dbglvl, DBG_REFINE,
       printf("\t[%6d %6d], Balance: %5.3f, Nb: %6d. Nmoves: %5d, Cut: %6d\n",
               pwgts[idxamin(nparts, pwgts)], pwgts[idxamax(nparts, pwgts)],
               1.0*nparts*pwgts[idxamax(nparts, pwgts)]/tvwgt, graph->nbnd, nmoves, graph->mincut));
  }

  PQueueFree(ctrl, &queue);

  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);

}
예제 #15
0
파일: pmetis.c 프로젝트: davidheryanto/sc14
/*************************************************************************
* This function takes a graph and a bisection and splits it into two graphs.
**************************************************************************/
void SplitGraphPart(CtrlType *ctrl, GraphType *graph, GraphType *lgraph, GraphType *rgraph)
{
  int i, j, k, kk, l, istart, iend, mypart, nvtxs, ncon, snvtxs[2], snedges[2], sum;
  idxtype *xadj, *vwgt, *adjncy, *adjwgt, *adjwgtsum, *label, *where, *bndptr;
  idxtype *sxadj[2], *svwgt[2], *sadjncy[2], *sadjwgt[2], *sadjwgtsum[2], *slabel[2];
  idxtype *rename;
  idxtype *auxadjncy, *auxadjwgt;
  floattype *nvwgt, *snvwgt[2], *npwgts;


  IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->SplitTmr));

  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  vwgt = graph->vwgt;
  nvwgt = graph->nvwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  adjwgtsum = graph->adjwgtsum;
  label = graph->label;
  where = graph->where;
  bndptr = graph->bndptr;
  npwgts = graph->npwgts;

  ASSERT(bndptr != NULL);

  rename = idxwspacemalloc(ctrl, nvtxs);
  
  snvtxs[0] = snvtxs[1] = snedges[0] = snedges[1] = 0;
  for (i=0; i<nvtxs; i++) {
    k = where[i];
    rename[i] = snvtxs[k]++;
    snedges[k] += xadj[i+1]-xadj[i];
  }

  SetUpSplitGraph(graph, lgraph, snvtxs[0], snedges[0]);
  sxadj[0] = lgraph->xadj;
  svwgt[0] = lgraph->vwgt;
  snvwgt[0] = lgraph->nvwgt;
  sadjwgtsum[0] = lgraph->adjwgtsum;
  sadjncy[0] = lgraph->adjncy; 	
  sadjwgt[0] = lgraph->adjwgt; 
  slabel[0] = lgraph->label;

  SetUpSplitGraph(graph, rgraph, snvtxs[1], snedges[1]);
  sxadj[1] = rgraph->xadj;
  svwgt[1] = rgraph->vwgt;
  snvwgt[1] = rgraph->nvwgt;
  sadjwgtsum[1] = rgraph->adjwgtsum;
  sadjncy[1] = rgraph->adjncy; 	
  sadjwgt[1] = rgraph->adjwgt; 
  slabel[1] = rgraph->label;

  snvtxs[0] = snvtxs[1] = snedges[0] = snedges[1] = 0;
  sxadj[0][0] = sxadj[1][0] = 0;
  for (i=0; i<nvtxs; i++) {
    mypart = where[i];
    sum = adjwgtsum[i];

    istart = xadj[i];
    iend = xadj[i+1];
    if (bndptr[i] == -1) { /* This is an interior vertex */
      auxadjncy = sadjncy[mypart] + snedges[mypart] - istart;
      auxadjwgt = sadjwgt[mypart] + snedges[mypart] - istart;
      for(j=istart; j<iend; j++) {
        auxadjncy[j] = adjncy[j];
        auxadjwgt[j] = adjwgt[j]; 
      }
      snedges[mypart] += iend-istart;
    }
    else {
      auxadjncy = sadjncy[mypart];
      auxadjwgt = sadjwgt[mypart];
      l = snedges[mypart];
      for (j=istart; j<iend; j++) {
        k = adjncy[j];
        if (where[k] == mypart) {
          auxadjncy[l] = k;
          auxadjwgt[l++] = adjwgt[j]; 
        }
        else {
          sum -= adjwgt[j];
        }
      }
      snedges[mypart] = l;
    }

    if (ncon == 1)
      svwgt[mypart][snvtxs[mypart]] = vwgt[i];
    else {
      for (kk=0; kk<ncon; kk++)
        snvwgt[mypart][snvtxs[mypart]*ncon+kk] = nvwgt[i*ncon+kk]/npwgts[mypart*ncon+kk];
    }

    sadjwgtsum[mypart][snvtxs[mypart]] = sum;
    slabel[mypart][snvtxs[mypart]] = label[i];
    sxadj[mypart][++snvtxs[mypart]] = snedges[mypart];
  }

  for (mypart=0; mypart<2; mypart++) {
    iend = sxadj[mypart][snvtxs[mypart]];
    auxadjncy = sadjncy[mypart];
    for (i=0; i<iend; i++) 
      auxadjncy[i] = rename[auxadjncy[i]];
  }

  lgraph->nedges = snedges[0];
  rgraph->nedges = snedges[1];

  IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->SplitTmr));

  idxwspacefree(ctrl, nvtxs);
}
예제 #16
0
/*************************************************************************
* This function takes a graph and a bisection and splits it into two graphs.
* This function relies on the fact that adjwgt is all equal to 1.
**************************************************************************/
void SplitGraphOrder(CtrlType *ctrl, GraphType *graph, GraphType *lgraph, GraphType *rgraph)
{
  int i, ii, j, k, l, istart, iend, mypart, nvtxs, snvtxs[3], snedges[3];
  idxtype *xadj, *vwgt, *adjncy, *adjwgt, *adjwgtsum, *label, *where, *bndptr, *bndind;
  idxtype *sxadj[2], *svwgt[2], *sadjncy[2], *sadjwgt[2], *sadjwgtsum[2], *slabel[2];
  idxtype *rename;
  idxtype *auxadjncy, *auxadjwgt;

  IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->SplitTmr));

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  vwgt = graph->vwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  adjwgtsum = graph->adjwgtsum;
  label = graph->label;
  where = graph->where;
  bndptr = graph->bndptr;
  bndind = graph->bndind;
  ASSERT(bndptr != NULL);

  rename = idxwspacemalloc(ctrl, nvtxs);
  
  snvtxs[0] = snvtxs[1] = snvtxs[2] = snedges[0] = snedges[1] = snedges[2] = 0;
  for (i=0; i<nvtxs; i++) {
    k = where[i];
    rename[i] = snvtxs[k]++;
    snedges[k] += xadj[i+1]-xadj[i];
  }

  SetUpSplitGraph(graph, lgraph, snvtxs[0], snedges[0]);
  sxadj[0] = lgraph->xadj;
  svwgt[0] = lgraph->vwgt;
  sadjwgtsum[0] = lgraph->adjwgtsum;
  sadjncy[0] = lgraph->adjncy; 
  sadjwgt[0] = lgraph->adjwgt; 
  slabel[0] = lgraph->label;

  SetUpSplitGraph(graph, rgraph, snvtxs[1], snedges[1]);
  sxadj[1] = rgraph->xadj;
  svwgt[1] = rgraph->vwgt;
  sadjwgtsum[1] = rgraph->adjwgtsum;
  sadjncy[1] = rgraph->adjncy; 
  sadjwgt[1] = rgraph->adjwgt; 
  slabel[1] = rgraph->label;

  /* Go and use bndptr to also mark the boundary nodes in the two partitions */
  for (ii=0; ii<graph->nbnd; ii++) {
    i = bndind[ii];
    for (j=xadj[i]; j<xadj[i+1]; j++)
      bndptr[adjncy[j]] = 1;
  }

  snvtxs[0] = snvtxs[1] = snedges[0] = snedges[1] = 0;
  sxadj[0][0] = sxadj[1][0] = 0;
  for (i=0; i<nvtxs; i++) {
    if ((mypart = where[i]) == 2)
      continue;

    istart = xadj[i];
    iend = xadj[i+1];
    if (bndptr[i] == -1) { /* This is an interior vertex */
      auxadjncy = sadjncy[mypart] + snedges[mypart] - istart;
      for(j=istart; j<iend; j++) 
        auxadjncy[j] = adjncy[j];
      snedges[mypart] += iend-istart;
    }
    else {
      auxadjncy = sadjncy[mypart];
      l = snedges[mypart];
      for (j=istart; j<iend; j++) {
        k = adjncy[j];
        if (where[k] == mypart) 
          auxadjncy[l++] = k;
      }
      snedges[mypart] = l;
    }

    svwgt[mypart][snvtxs[mypart]] = vwgt[i];
    sadjwgtsum[mypart][snvtxs[mypart]] = snedges[mypart]-sxadj[mypart][snvtxs[mypart]];
    slabel[mypart][snvtxs[mypart]] = label[i];
    sxadj[mypart][++snvtxs[mypart]] = snedges[mypart];
  }

  for (mypart=0; mypart<2; mypart++) {
    iend = snedges[mypart];
    idxset(iend, 1, sadjwgt[mypart]);

    auxadjncy = sadjncy[mypart];
    for (i=0; i<iend; i++) 
      auxadjncy[i] = rename[auxadjncy[i]];
  }

  lgraph->nvtxs = snvtxs[0];
  lgraph->nedges = snedges[0];
  rgraph->nvtxs = snvtxs[1];
  rgraph->nedges = snedges[1];

  IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->SplitTmr));

  idxwspacefree(ctrl, nvtxs);

}
예제 #17
0
/*************************************************************************
* This function performs an edge-based FM refinement
**************************************************************************/
void MocGeneral2WayBalance(CtrlType *ctrl, GraphType *graph, float *tpwgts, float lbfactor)
{
  int i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, me, limit, tmp, cnum;
  idxtype *xadj, *adjncy, *adjwgt, *where, *id, *ed, *bndptr, *bndind;
  idxtype *moved, *swaps, *perm, *qnum;
  float *nvwgt, *npwgts, mindiff[MAXNCON], origbal, minbal, newbal;
  PQueueType parts[MAXNCON][2];
  int higain, oldgain, mincut, newcut, mincutorder;
  int qsizes[MAXNCON][2];

  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  nvwgt = graph->nvwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  where = graph->where;
  id = graph->id;
  ed = graph->ed;
  npwgts = graph->npwgts;
  bndptr = graph->bndptr;
  bndind = graph->bndind;

  moved = idxwspacemalloc(ctrl, nvtxs);
  swaps = idxwspacemalloc(ctrl, nvtxs);
  perm = idxwspacemalloc(ctrl, nvtxs);
  qnum = idxwspacemalloc(ctrl, nvtxs);

  limit = (int) amin(amax(0.01*nvtxs, 15), 100);

  /* Initialize the queues */
  for (i=0; i<ncon; i++) {
    PQueueInit(ctrl, &parts[i][0], nvtxs, PLUS_GAINSPAN+1);
    PQueueInit(ctrl, &parts[i][1], nvtxs, PLUS_GAINSPAN+1);
    qsizes[i][0] = qsizes[i][1] = 0;
  }

  for (i=0; i<nvtxs; i++) {
    qnum[i] = samax(ncon, nvwgt+i*ncon);
    qsizes[qnum[i]][where[i]]++;
  }

/*
  printf("Weight Distribution:    \t");
  for (i=0; i<ncon; i++) 
    printf(" [%d %d]", qsizes[i][0], qsizes[i][1]); 
  printf("\n");
*/

  for (from=0; from<2; from++) {
    for (j=0; j<ncon; j++) {
      if (qsizes[j][from] == 0) {
        for (i=0; i<nvtxs; i++) {
          if (where[i] != from)
            continue;

          k = samax2(ncon, nvwgt+i*ncon);
          if (k == j && qsizes[qnum[i]][from] > qsizes[j][from] && nvwgt[i*ncon+qnum[i]] < 1.3*nvwgt[i*ncon+j]) {
            qsizes[qnum[i]][from]--;
            qsizes[j][from]++;
            qnum[i] = j;
          }
        }
      }
    }
  }

/*
  printf("Weight Distribution (after):\t ");
  for (i=0; i<ncon; i++) 
    printf(" [%d %d]", qsizes[i][0], qsizes[i][1]); 
  printf("\n");
*/



  for (i=0; i<ncon; i++) 
    mindiff[i] = fabs(tpwgts[0]-npwgts[i]);
  minbal = origbal = Compute2WayHLoadImbalance(ncon, npwgts, tpwgts);
  newcut = mincut = graph->mincut;
  mincutorder = -1;

  if (ctrl->dbglvl&DBG_REFINE) {
    printf("Parts: [");
    for (l=0; l<ncon; l++)
      printf("(%.3f, %.3f) ", npwgts[l], npwgts[ncon+l]);
    printf("] T[%.3f %.3f], Nv-Nb[%5d, %5d]. ICut: %6d, LB: %.3f [B]\n", tpwgts[0], tpwgts[1], graph->nvtxs, graph->nbnd, graph->mincut, origbal);
  }

  idxset(nvtxs, -1, moved);

  ASSERT(ComputeCut(graph, where) == graph->mincut);
  ASSERT(CheckBnd(graph));

  /* Insert all nodes in the priority queues */
  nbnd = graph->nbnd;
  RandomPermute(nvtxs, perm, 1);
  for (ii=0; ii<nvtxs; ii++) {
    i = perm[ii];
    PQueueInsert(&parts[qnum[i]][where[i]], i, ed[i]-id[i]);
  }

  for (nswaps=0; nswaps<nvtxs; nswaps++) {
    if (minbal < lbfactor)
      break;

    SelectQueue(ncon, npwgts, tpwgts, &from, &cnum, parts);
    to = (from+1)%2;

    if (from == -1 || (higain = PQueueGetMax(&parts[cnum][from])) == -1)
      break;

    saxpy(ncon, 1.0, nvwgt+higain*ncon, 1, npwgts+to*ncon, 1);
    saxpy(ncon, -1.0, nvwgt+higain*ncon, 1, npwgts+from*ncon, 1);
    newcut -= (ed[higain]-id[higain]);
    newbal = Compute2WayHLoadImbalance(ncon, npwgts, tpwgts);

    if (newbal < minbal || (newbal == minbal && 
        (newcut < mincut || (newcut == mincut && BetterBalance(ncon, npwgts, tpwgts, mindiff))))) {
      mincut = newcut;
      minbal = newbal;
      mincutorder = nswaps;
      for (i=0; i<ncon; i++)
        mindiff[i] = fabs(tpwgts[0]-npwgts[i]);
    }
    else if (nswaps-mincutorder > limit) { /* We hit the limit, undo last move */
      newcut += (ed[higain]-id[higain]);
      saxpy(ncon, 1.0, nvwgt+higain*ncon, 1, npwgts+from*ncon, 1);
      saxpy(ncon, -1.0, nvwgt+higain*ncon, 1, npwgts+to*ncon, 1);
      break;
    }

    where[higain] = to;
    moved[higain] = nswaps;
    swaps[nswaps] = higain;

    if (ctrl->dbglvl&DBG_MOVEINFO) {
      printf("Moved %6d from %d(%d). Gain: %5d, Cut: %5d, NPwgts: ", higain, from, cnum, ed[higain]-id[higain], newcut);
      for (l=0; l<ncon; l++) 
        printf("(%.3f, %.3f) ", npwgts[l], npwgts[ncon+l]);
      printf(", %.3f LB: %.3f\n", minbal, newbal);
    }


    /**************************************************************
    * Update the id[i]/ed[i] values of the affected nodes
    ***************************************************************/
    SWAP(id[higain], ed[higain], tmp);
    if (ed[higain] == 0 && bndptr[higain] != -1 && xadj[higain] < xadj[higain+1]) 
      BNDDelete(nbnd, bndind,  bndptr, higain);
    if (ed[higain] > 0 && bndptr[higain] == -1)
      BNDInsert(nbnd, bndind,  bndptr, higain);

    for (j=xadj[higain]; j<xadj[higain+1]; j++) {
      k = adjncy[j];
      oldgain = ed[k]-id[k];

      kwgt = (to == where[k] ? adjwgt[j] : -adjwgt[j]);
      INC_DEC(id[k], ed[k], kwgt);

      /* Update the queue position */
      if (moved[k] == -1)
        PQueueUpdate(&parts[qnum[k]][where[k]], k, oldgain, ed[k]-id[k]);

      /* Update its boundary information */
      if (ed[k] == 0 && bndptr[k] != -1) 
        BNDDelete(nbnd, bndind, bndptr, k);
      else if (ed[k] > 0 && bndptr[k] == -1)  
        BNDInsert(nbnd, bndind, bndptr, k);
    }
  }



  /****************************************************************
  * Roll back computations
  *****************************************************************/
  for (nswaps--; nswaps>mincutorder; nswaps--) {
    higain = swaps[nswaps];

    to = where[higain] = (where[higain]+1)%2;
    SWAP(id[higain], ed[higain], tmp);
    if (ed[higain] == 0 && bndptr[higain] != -1 && xadj[higain] < xadj[higain+1])
      BNDDelete(nbnd, bndind,  bndptr, higain);
    else if (ed[higain] > 0 && bndptr[higain] == -1)
      BNDInsert(nbnd, bndind,  bndptr, higain);

    saxpy(ncon, 1.0, nvwgt+higain*ncon, 1, npwgts+to*ncon, 1);
    saxpy(ncon, -1.0, nvwgt+higain*ncon, 1, npwgts+((to+1)%2)*ncon, 1);
    for (j=xadj[higain]; j<xadj[higain+1]; j++) {
      k = adjncy[j];

      kwgt = (to == where[k] ? adjwgt[j] : -adjwgt[j]);
      INC_DEC(id[k], ed[k], kwgt);

      if (bndptr[k] != -1 && ed[k] == 0)
        BNDDelete(nbnd, bndind, bndptr, k);
      if (bndptr[k] == -1 && ed[k] > 0)
        BNDInsert(nbnd, bndind, bndptr, k);
    }
  }

  if (ctrl->dbglvl&DBG_REFINE) {
    printf("\tMincut: %6d at %5d, NBND: %6d, NPwgts: [", mincut, mincutorder, nbnd);
    for (l=0; l<ncon; l++)
      printf("(%.3f, %.3f) ", npwgts[l], npwgts[ncon+l]);
    printf("], LB: %.3f\n", Compute2WayHLoadImbalance(ncon, npwgts, tpwgts));
  }

  graph->mincut = mincut;
  graph->nbnd = nbnd;


  for (i=0; i<ncon; i++) {
    PQueueFree(ctrl, &parts[i][0]);
    PQueueFree(ctrl, &parts[i][1]);
  }

  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);

}
예제 #18
0
/*************************************************************************
* This function performs k-way refinement
**************************************************************************/
void MCRandom_KWayEdgeRefineHorizontal(CtrlType *ctrl, GraphType *graph, int nparts, 
       float *orgubvec, int npasses)
{
  int i, ii, iii, j, k, pass, nvtxs, ncon, nmoves, nbnd, myndegrees, same; 
  int from, me, to, oldcut, gain;
  idxtype *xadj, *adjncy, *adjwgt;
  idxtype *where, *perm, *bndptr, *bndind;
  EDegreeType *myedegrees;
  RInfoType *myrinfo;
  float *npwgts, *nvwgt, *minwgt, *maxwgt, maxlb, minlb, ubvec[MAXNCON], tvec[MAXNCON];

  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;

  bndptr = graph->bndptr;
  bndind = graph->bndind;

  where = graph->where;
  npwgts = graph->npwgts;
  
  /* Setup the weight intervals of the various subdomains */
  minwgt =  fwspacemalloc(ctrl, nparts*ncon);
  maxwgt = fwspacemalloc(ctrl, nparts*ncon);

  /* See if the orgubvec consists of identical constraints */
  maxlb = minlb = orgubvec[0];
  for (i=1; i<ncon; i++) {
    minlb = (orgubvec[i] < minlb ? orgubvec[i] : minlb);
    maxlb = (orgubvec[i] > maxlb ? orgubvec[i] : maxlb);
  }
  same = (fabs(maxlb-minlb) < .01 ? 1 : 0);


  /* Let's not get very optimistic. Let Balancing do the work */
  ComputeHKWayLoadImbalance(ncon, nparts, npwgts, ubvec);
  for (i=0; i<ncon; i++)
    ubvec[i] = amax(ubvec[i], orgubvec[i]);

  if (!same) {
    for (i=0; i<nparts; i++) {
      for (j=0; j<ncon; j++) {
        maxwgt[i*ncon+j] = ubvec[j]/nparts;
        minwgt[i*ncon+j] = 1.0/(ubvec[j]*nparts);
      }
    }
  }
  else {
    maxlb = ubvec[0];
    for (i=1; i<ncon; i++) 
      maxlb = (ubvec[i] > maxlb ? ubvec[i] : maxlb);

    for (i=0; i<nparts; i++) {
      for (j=0; j<ncon; j++) {
        maxwgt[i*ncon+j] = maxlb/nparts;
        minwgt[i*ncon+j] = 1.0/(maxlb*nparts);
      }
    }
  }


  perm = idxwspacemalloc(ctrl, nvtxs);

  if (ctrl->dbglvl&DBG_REFINE) {
    printf("Partitions: [%5.4f %5.4f], Nv-Nb[%6d %6d]. Cut: %6d, LB: ",
            npwgts[samin(ncon*nparts, npwgts)], npwgts[samax(ncon*nparts, npwgts)], 
            graph->nvtxs, graph->nbnd, graph->mincut);
    ComputeHKWayLoadImbalance(ncon, nparts, npwgts, tvec);
    for (i=0; i<ncon; i++)
      printf("%.3f ", tvec[i]);
    printf("\n");
  }

  for (pass=0; pass<npasses; pass++) {
    ASSERT(ComputeCut(graph, where) == graph->mincut);

    oldcut = graph->mincut;
    nbnd = graph->nbnd;

    RandomPermute(nbnd, perm, 1);
    for (nmoves=iii=0; iii<graph->nbnd; iii++) {
      ii = perm[iii];
      if (ii >= nbnd)
        continue;
      i = bndind[ii];

      myrinfo = graph->rinfo+i;

      if (myrinfo->ed >= myrinfo->id) { /* Total ED is too high */
        from = where[i];
        nvwgt = graph->nvwgt+i*ncon;

        if (myrinfo->id > 0 && AreAllHVwgtsBelow(ncon, 1.0, npwgts+from*ncon, -1.0, nvwgt, minwgt+from*ncon)) 
          continue;   /* This cannot be moved! */

        myedegrees = myrinfo->edegrees;
        myndegrees = myrinfo->ndegrees;

        for (k=0; k<myndegrees; k++) {
          to = myedegrees[k].pid;
          gain = myedegrees[k].ed - myrinfo->id; 
          if (gain >= 0 && 
              (AreAllHVwgtsBelow(ncon, 1.0, npwgts+to*ncon, 1.0, nvwgt, maxwgt+to*ncon) ||
               IsHBalanceBetterFT(ncon, nparts, npwgts+from*ncon, npwgts+to*ncon, nvwgt, ubvec)))
            break;
        }
        if (k == myndegrees)
          continue;  /* break out if you did not find a candidate */

        for (j=k+1; j<myndegrees; j++) {
          to = myedegrees[j].pid;
          if ((myedegrees[j].ed > myedegrees[k].ed &&
               (AreAllHVwgtsBelow(ncon, 1.0, npwgts+to*ncon, 1.0, nvwgt, maxwgt+to*ncon) || 
               IsHBalanceBetterFT(ncon, nparts, npwgts+from*ncon, npwgts+to*ncon, nvwgt, ubvec))) ||
              (myedegrees[j].ed == myedegrees[k].ed && 
               IsHBalanceBetterTT(ncon, nparts, npwgts+myedegrees[k].pid*ncon, npwgts+to*ncon, nvwgt, ubvec)))
            k = j;
        }

        to = myedegrees[k].pid;

        if (myedegrees[k].ed-myrinfo->id == 0 
            && !IsHBalanceBetterFT(ncon, nparts, npwgts+from*ncon, npwgts+to*ncon, nvwgt, ubvec)
            && AreAllHVwgtsBelow(ncon, 1.0, npwgts+from*ncon, 0.0, npwgts+from*ncon, maxwgt+from*ncon)) 
          continue;

        /*=====================================================================
        * If we got here, we can now move the vertex from 'from' to 'to' 
        *======================================================================*/
        graph->mincut -= myedegrees[k].ed-myrinfo->id;

        IFSET(ctrl->dbglvl, DBG_MOVEINFO, printf("\t\tMoving %6d to %3d. Gain: %4d. Cut: %6d\n", i, to, myedegrees[k].ed-myrinfo->id, graph->mincut));

        /* Update where, weight, and ID/ED information of the vertex you moved */
        saxpy(ncon, 1.0, nvwgt, 1, npwgts+to*ncon, 1);
        saxpy(ncon, -1.0, nvwgt, 1, npwgts+from*ncon, 1);
        where[i] = to;
        myrinfo->ed += myrinfo->id-myedegrees[k].ed;
        SWAP(myrinfo->id, myedegrees[k].ed, j);
        if (myedegrees[k].ed == 0) 
          myedegrees[k] = myedegrees[--myrinfo->ndegrees];
        else
          myedegrees[k].pid = from;

        if (myrinfo->ed-myrinfo->id < 0)
          BNDDelete(nbnd, bndind, bndptr, i);

        /* Update the degrees of adjacent vertices */
        for (j=xadj[i]; j<xadj[i+1]; j++) {
          ii = adjncy[j];
          me = where[ii];

          myrinfo = graph->rinfo+ii;
          if (myrinfo->edegrees == NULL) {
            myrinfo->edegrees = ctrl->wspace.edegrees+ctrl->wspace.cdegree;
            ctrl->wspace.cdegree += xadj[ii+1]-xadj[ii];
          }
          myedegrees = myrinfo->edegrees;

          ASSERT(CheckRInfo(myrinfo));

          if (me == from) {
            INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]);

            if (myrinfo->ed-myrinfo->id >= 0 && bndptr[ii] == -1)
              BNDInsert(nbnd, bndind, bndptr, ii);
          }
          else if (me == to) {
            INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]);

            if (myrinfo->ed-myrinfo->id < 0 && bndptr[ii] != -1)
              BNDDelete(nbnd, bndind, bndptr, ii);
          }

          /* Remove contribution from the .ed of 'from' */
          if (me != from) {
            for (k=0; k<myrinfo->ndegrees; k++) {
              if (myedegrees[k].pid == from) {
                if (myedegrees[k].ed == adjwgt[j])
                  myedegrees[k] = myedegrees[--myrinfo->ndegrees];
                else
                  myedegrees[k].ed -= adjwgt[j];
                break;
              }
            }
          }

          /* Add contribution to the .ed of 'to' */
          if (me != to) {
            for (k=0; k<myrinfo->ndegrees; k++) {
              if (myedegrees[k].pid == to) {
                myedegrees[k].ed += adjwgt[j];
                break;
              }
            }
            if (k == myrinfo->ndegrees) {
              myedegrees[myrinfo->ndegrees].pid = to;
              myedegrees[myrinfo->ndegrees++].ed = adjwgt[j];
            }
          }

          ASSERT(myrinfo->ndegrees <= xadj[ii+1]-xadj[ii]);
          ASSERT(CheckRInfo(myrinfo));

        }
        nmoves++;
      }
    }

    graph->nbnd = nbnd;

    if (ctrl->dbglvl&DBG_REFINE) {
      printf("\t [%5.4f %5.4f], Nb: %6d, Nmoves: %5d, Cut: %6d, LB: ",
              npwgts[samin(ncon*nparts, npwgts)], npwgts[samax(ncon*nparts, npwgts)], 
              nbnd, nmoves, graph->mincut);
      ComputeHKWayLoadImbalance(ncon, nparts, npwgts, tvec);
      for (i=0; i<ncon; i++)
        printf("%.3f ", tvec[i]);
      printf("\n");
    }

    if (graph->mincut == oldcut)
      break;
  }

  fwspacefree(ctrl, ncon*nparts);
  fwspacefree(ctrl, ncon*nparts);
  idxwspacefree(ctrl, nvtxs);
}
예제 #19
0
파일: mfm2.c 프로젝트: dwickeroth/covise
/*************************************************************************
* This function performs an edge-based FM refinement
**************************************************************************/
void MocFM_2WayEdgeRefine2(CtrlType *ctrl, GraphType *graph, float *tpwgts, float *orgubvec, 
       int npasses)
{
  int i, j, ii, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, limit, tmp, cnum;
  idxtype *xadj, *adjncy, *adjwgt, *where, *id, *ed, *bndptr, *bndind;
  idxtype *moved, *swaps, *perm, *qnum;
  float *nvwgt, *npwgts, origdiff[MAXNCON], origbal[MAXNCON], minbal[MAXNCON];
  PQueueType parts[MAXNCON][2];
  int higain, oldgain, mincut, initcut, newcut, mincutorder;
  float *maxwgt, *minwgt, ubvec[MAXNCON], tvec[MAXNCON];

  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  nvwgt = graph->nvwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  where = graph->where;
  id = graph->id;
  ed = graph->ed;
  npwgts = graph->npwgts;
  bndptr = graph->bndptr;
  bndind = graph->bndind;

  moved = idxwspacemalloc(ctrl, nvtxs);
  swaps = idxwspacemalloc(ctrl, nvtxs);
  perm = idxwspacemalloc(ctrl, nvtxs);
  qnum = idxwspacemalloc(ctrl, nvtxs);

  limit = amin(amax(0.01*nvtxs, 15), 100);

  Compute2WayHLoadImbalanceVec(ncon, npwgts, tpwgts, origbal);
  for (i=0; i<ncon; i++) {
    origdiff[i] = fabs(tpwgts[0]-npwgts[i]);
    ubvec[i] = amax(origbal[i], orgubvec[i]);
  }

  /* Setup the weight intervals of the two subdomains */
  minwgt = fwspacemalloc(ctrl, 2*ncon);
  maxwgt = fwspacemalloc(ctrl, 2*ncon);

  for (i=0; i<2; i++) {
    for (j=0; j<ncon; j++) {
      maxwgt[i*ncon+j] = tpwgts[i]*ubvec[j];
      minwgt[i*ncon+j] = tpwgts[i]*(1.0/ubvec[j]);
    }
  }

  /* Initialize the queues */
  for (i=0; i<ncon; i++) {
    PQueueInit(ctrl, &parts[i][0], nvtxs, PLUS_GAINSPAN+1);
    PQueueInit(ctrl, &parts[i][1], nvtxs, PLUS_GAINSPAN+1);
  }
  for (i=0; i<nvtxs; i++)
    qnum[i] = samax(ncon, nvwgt+i*ncon);


  if (ctrl->dbglvl&DBG_REFINE) {
    printf("Parts: [");
    for (l=0; l<ncon; l++)
      printf("(%.3f, %.3f) ", npwgts[l], npwgts[ncon+l]);
    printf("] T[%.3f %.3f], Nv-Nb[%5d, %5d]. ICut: %6d, LB: ", tpwgts[0], tpwgts[1], 
            graph->nvtxs, graph->nbnd, graph->mincut);
    for (i=0; i<ncon; i++)
      printf("%.3f ", origbal[i]);
    printf("\n");
  }

  idxset(nvtxs, -1, moved);
  for (pass=0; pass<npasses; pass++) { /* Do a number of passes */
    for (i=0; i<ncon; i++) { 
      PQueueReset(&parts[i][0]);
      PQueueReset(&parts[i][1]);
    }

    mincutorder = -1;
    newcut = mincut = initcut = graph->mincut;
    Compute2WayHLoadImbalanceVec(ncon, npwgts, tpwgts, minbal);

    ASSERT(ComputeCut(graph, where) == graph->mincut);
    ASSERT(CheckBnd(graph));

    /* Insert boundary nodes in the priority queues */
    nbnd = graph->nbnd;
    RandomPermute(nbnd, perm, 1);
    for (ii=0; ii<nbnd; ii++) {
      i = bndind[perm[ii]];
      ASSERT(ed[i] > 0 || id[i] == 0);
      ASSERT(bndptr[i] != -1);
      PQueueInsert(&parts[qnum[i]][where[i]], i, ed[i]-id[i]);
    }

    for (nswaps=0; nswaps<nvtxs; nswaps++) {
      SelectQueue2(ncon, npwgts, tpwgts, &from, &cnum, parts, maxwgt);
      to = (from+1)%2;

      if (from == -1 || (higain = PQueueGetMax(&parts[cnum][from])) == -1)
        break;
      ASSERT(bndptr[higain] != -1);

      newcut -= (ed[higain]-id[higain]);
      saxpy(ncon, 1.0, nvwgt+higain*ncon, 1, npwgts+to*ncon, 1);
      saxpy(ncon, -1.0, nvwgt+higain*ncon, 1, npwgts+from*ncon, 1);

      Compute2WayHLoadImbalanceVec(ncon, npwgts, tpwgts, tvec);
      if ((newcut < mincut && AreAllBelow(ncon, tvec, ubvec)) ||
          (newcut == mincut && IsBetter2wayBalance(ncon, tvec, minbal, ubvec))) {
        mincut = newcut;
        for (i=0; i<ncon; i++) 
          minbal[i] = tvec[i];
        mincutorder = nswaps;
      }
      else if (nswaps-mincutorder > limit) { /* We hit the limit, undo last move */
        newcut += (ed[higain]-id[higain]);
        saxpy(ncon, 1.0, nvwgt+higain*ncon, 1, npwgts+from*ncon, 1);
        saxpy(ncon, -1.0, nvwgt+higain*ncon, 1, npwgts+to*ncon, 1);
        break;
      }

      where[higain] = to;
      moved[higain] = nswaps;
      swaps[nswaps] = higain;

      if (ctrl->dbglvl&DBG_MOVEINFO) {
        printf("Moved %6d from %d(%d). Gain: %5d, Cut: %5d, NPwgts: ", higain, from, cnum, ed[higain]-id[higain], newcut);
        for (l=0; l<ncon; l++) 
          printf("(%.3f, %.3f) ", npwgts[l], npwgts[ncon+l]);

        printf(", LB: ");
        for (i=0; i<ncon; i++) 
          printf("%.3f ", tvec[i]);
        if (mincutorder == nswaps)
          printf(" *\n");
        else
          printf("\n");
      }


      /**************************************************************
      * Update the id[i]/ed[i] values of the affected nodes
      ***************************************************************/
      SWAP(id[higain], ed[higain], tmp);
      if (ed[higain] == 0 && xadj[higain] < xadj[higain+1]) 
        BNDDelete(nbnd, bndind,  bndptr, higain);

      for (j=xadj[higain]; j<xadj[higain+1]; j++) {
        k = adjncy[j];
        oldgain = ed[k]-id[k];

        kwgt = (to == where[k] ? adjwgt[j] : -adjwgt[j]);
        INC_DEC(id[k], ed[k], kwgt);

        /* Update its boundary information and queue position */
        if (bndptr[k] != -1) { /* If k was a boundary vertex */
          if (ed[k] == 0) { /* Not a boundary vertex any more */
            BNDDelete(nbnd, bndind, bndptr, k);
            if (moved[k] == -1)  /* Remove it if in the queues */
              PQueueDelete(&parts[qnum[k]][where[k]], k, oldgain);
          }
          else { /* If it has not been moved, update its position in the queue */
            if (moved[k] == -1)
              PQueueUpdate(&parts[qnum[k]][where[k]], k, oldgain, ed[k]-id[k]);
          }
        }
        else {
          if (ed[k] > 0) {  /* It will now become a boundary vertex */
            BNDInsert(nbnd, bndind, bndptr, k);
            if (moved[k] == -1) 
              PQueueInsert(&parts[qnum[k]][where[k]], k, ed[k]-id[k]);
          }
        }
      }

    }


    /****************************************************************
    * Roll back computations
    *****************************************************************/
    for (i=0; i<nswaps; i++)
      moved[swaps[i]] = -1;  /* reset moved array */
    for (nswaps--; nswaps>mincutorder; nswaps--) {
      higain = swaps[nswaps];

      to = where[higain] = (where[higain]+1)%2;
      SWAP(id[higain], ed[higain], tmp);
      if (ed[higain] == 0 && bndptr[higain] != -1 && xadj[higain] < xadj[higain+1])
        BNDDelete(nbnd, bndind,  bndptr, higain);
      else if (ed[higain] > 0 && bndptr[higain] == -1)
        BNDInsert(nbnd, bndind,  bndptr, higain);

      saxpy(ncon, 1.0, nvwgt+higain*ncon, 1, npwgts+to*ncon, 1);
      saxpy(ncon, -1.0, nvwgt+higain*ncon, 1, npwgts+((to+1)%2)*ncon, 1);
      for (j=xadj[higain]; j<xadj[higain+1]; j++) {
        k = adjncy[j];

        kwgt = (to == where[k] ? adjwgt[j] : -adjwgt[j]);
        INC_DEC(id[k], ed[k], kwgt);

        if (bndptr[k] != -1 && ed[k] == 0)
          BNDDelete(nbnd, bndind, bndptr, k);
        if (bndptr[k] == -1 && ed[k] > 0)
          BNDInsert(nbnd, bndind, bndptr, k);
      }
    }

    if (ctrl->dbglvl&DBG_REFINE) {
      printf("\tMincut: %6d at %5d, NBND: %6d, NPwgts: [", mincut, mincutorder, nbnd);
      for (l=0; l<ncon; l++)
        printf("(%.3f, %.3f) ", npwgts[l], npwgts[ncon+l]);
      printf("], LB: ");
      Compute2WayHLoadImbalanceVec(ncon, npwgts, tpwgts, tvec);
      for (i=0; i<ncon; i++) 
        printf("%.3f ", tvec[i]);
      printf("\n");
    }

    graph->mincut = mincut;
    graph->nbnd = nbnd;

    if (mincutorder == -1 || mincut == initcut)
      break;
  }

  for (i=0; i<ncon; i++) {
    PQueueFree(ctrl, &parts[i][0]);
    PQueueFree(ctrl, &parts[i][1]);
  }

  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  fwspacefree(ctrl, 2*ncon);
  fwspacefree(ctrl, 2*ncon);

}
예제 #20
0
/*************************************************************************
* This function creates the coarser graph
**************************************************************************/
void CreateCoarseGraphNoMask(CtrlType *ctrl, GraphType *graph, int cnvtxs, idxtype *match, idxtype *perm)
{
  int i, j, k, m, istart, iend, nvtxs, nedges, ncon, cnedges, v, u, dovsize;
  idxtype *xadj, *vwgt, *vsize, *adjncy, *adjwgt, *adjwgtsum, *auxadj;
  idxtype *cmap, *htable;
  idxtype *cxadj, *cvwgt, *cvsize, *cadjncy, *cadjwgt, *cadjwgtsum;
  float *nvwgt, *cnvwgt;
  GraphType *cgraph;

  dovsize = (ctrl->optype == OP_KVMETIS ? 1 : 0);

  IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->ContractTmr));

  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  vwgt = graph->vwgt;
  vsize = graph->vsize;
  nvwgt = graph->nvwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  adjwgtsum = graph->adjwgtsum;
  cmap = graph->cmap;


  /* Initialize the coarser graph */
  cgraph = SetUpCoarseGraph(graph, cnvtxs, dovsize);
  cxadj = cgraph->xadj;
  cvwgt = cgraph->vwgt;
  cvsize = cgraph->vsize;
  cnvwgt = cgraph->nvwgt;
  cadjwgtsum = cgraph->adjwgtsum;
  cadjncy = cgraph->adjncy;
  cadjwgt = cgraph->adjwgt;


  htable = idxset(cnvtxs, -1, idxwspacemalloc(ctrl, cnvtxs));

  iend = xadj[nvtxs];
  auxadj = ctrl->wspace.auxcore; 
  memcpy(auxadj, adjncy, iend*sizeof(idxtype)); 
  for (i=0; i<iend; i++)
    auxadj[i] = cmap[auxadj[i]];

  cxadj[0] = cnvtxs = cnedges = 0;
  for (i=0; i<nvtxs; i++) {
    v = perm[i];
    if (cmap[v] != cnvtxs) 
      continue;

    u = match[v];
    if (ncon == 1)
      cvwgt[cnvtxs] = vwgt[v];
    else
      scopy(ncon, nvwgt+v*ncon, cnvwgt+cnvtxs*ncon);

    if (dovsize)
      cvsize[cnvtxs] = vsize[v];

    cadjwgtsum[cnvtxs] = adjwgtsum[v];
    nedges = 0;

    istart = xadj[v];
    iend = xadj[v+1];
    for (j=istart; j<iend; j++) {
      k = auxadj[j];
      if ((m = htable[k]) == -1) {
        cadjncy[nedges] = k;
        cadjwgt[nedges] = adjwgt[j];
        htable[k] = nedges++;
      }
      else {
        cadjwgt[m] += adjwgt[j];
      }
    }

    if (v != u) { 
      if (ncon == 1)
        cvwgt[cnvtxs] += vwgt[u];
      else
        saxpy(ncon, 1.0, nvwgt+u*ncon, 1, cnvwgt+cnvtxs*ncon, 1);

      if (dovsize)
        cvsize[cnvtxs] += vsize[u];

      cadjwgtsum[cnvtxs] += adjwgtsum[u];

      istart = xadj[u];
      iend = xadj[u+1];
      for (j=istart; j<iend; j++) {
        k = auxadj[j];
        if ((m = htable[k]) == -1) {
          cadjncy[nedges] = k;
          cadjwgt[nedges] = adjwgt[j];
          htable[k] = nedges++;
        }
        else {
          cadjwgt[m] += adjwgt[j];
        }
      }

      /* Remove the contracted adjacency weight */
      if ((j = htable[cnvtxs]) != -1) {
        ASSERT(cadjncy[j] == cnvtxs);
        cadjwgtsum[cnvtxs] -= cadjwgt[j];
        cadjncy[j] = cadjncy[--nedges];
        cadjwgt[j] = cadjwgt[nedges];
        htable[cnvtxs] = -1;
      }
    }

    ASSERTP(cadjwgtsum[cnvtxs] == idxsum(nedges, cadjwgt), ("%d %d\n", cadjwgtsum[cnvtxs], idxsum(nedges, cadjwgt)));

    for (j=0; j<nedges; j++)
      htable[cadjncy[j]] = -1;  /* Zero out the htable */

    cnedges += nedges;
    cxadj[++cnvtxs] = cnedges;
    cadjncy += nedges;
    cadjwgt += nedges;
  }

  cgraph->nedges = cnedges;

  ReAdjustMemory(graph, cgraph, dovsize);

  IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->ContractTmr));

  idxwspacefree(ctrl, cnvtxs);
}
예제 #21
0
/*************************************************************************
* This function balances two partitions by moving the highest gain 
* (including negative gain) vertices to the other domain.
* It is used only when tha unbalance is due to non contigous
* subdomains. That is, the are no boundary vertices.
* It moves vertices from the domain that is overweight to the one that 
* is underweight.
**************************************************************************/
void MocInit2WayBalance2(CtrlType *ctrl, GraphType *graph, float *tpwgts, float *ubvec)
{
  int i, ii, j, k, l, kwgt, nvtxs, nbnd, ncon, nswaps, from, to, pass, me, cnum, tmp, imin;
  idxtype *xadj, *adjncy, *adjwgt, *where, *id, *ed, *bndptr, *bndind;
  idxtype *moved, *perm, *qnum;
  float *nvwgt, *npwgts, minwgt;
  PQueueType parts[MAXNCON][2];
  int higain, oldgain, mincut;

  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  nvwgt = graph->nvwgt;
  adjwgt = graph->adjwgt;
  where = graph->where;
  id = graph->id;
  ed = graph->ed;
  npwgts = graph->npwgts;
  bndptr = graph->bndptr;
  bndind = graph->bndind;

  moved = idxwspacemalloc(ctrl, nvtxs);
  perm = idxwspacemalloc(ctrl, nvtxs);
  qnum = idxwspacemalloc(ctrl, nvtxs);

  /* This is called for initial partitioning so we know from where to pick nodes */
  from = 1;
  to = (from+1)%2;

  if (ctrl->dbglvl&DBG_REFINE) {
    printf("Parts: [");
    for (l=0; l<ncon; l++)
      printf("(%.3f, %.3f) ", npwgts[l], npwgts[ncon+l]);
    printf("] T[%.3f %.3f], Nv-Nb[%5d, %5d]. ICut: %6d, LB: %.3f [B]\n", tpwgts[0], tpwgts[1], graph->nvtxs, graph->nbnd, graph->mincut, ComputeLoadImbalance(ncon, 2, npwgts, tpwgts));
  }

  for (i=0; i<ncon; i++) {
    PQueueInit(ctrl, &parts[i][0], nvtxs, PLUS_GAINSPAN+1);
    PQueueInit(ctrl, &parts[i][1], nvtxs, PLUS_GAINSPAN+1);
  }

  idxset(nvtxs, -1, moved);

  ASSERT(ComputeCut(graph, where) == graph->mincut);
  ASSERT(CheckBnd(graph));
  ASSERT(CheckGraph(graph));

  /* Compute the queues in which each vertex will be assigned to */
  for (i=0; i<nvtxs; i++)
    qnum[i] = samax(ncon, nvwgt+i*ncon);

  /* Insert the nodes of the proper partition in the appropriate priority queue */
  RandomPermute(nvtxs, perm, 1);
  for (ii=0; ii<nvtxs; ii++) {
    i = perm[ii];
    if (where[i] == from) {
      if (ed[i] > 0)
        PQueueInsert(&parts[qnum[i]][0], i, ed[i]-id[i]);
      else
        PQueueInsert(&parts[qnum[i]][1], i, ed[i]-id[i]);
    }
  }

/*
  for (i=0; i<ncon; i++)
    printf("Queue #%d has %d %d\n", i, parts[i][0].nnodes, parts[i][1].nnodes);
*/

  /* Determine the termination criterion */
  imin = 0;
  for (i=1; i<ncon; i++) 
    imin = (ubvec[i] < ubvec[imin] ? i : imin);
  minwgt = .5/ubvec[imin];

  mincut = graph->mincut;
  nbnd = graph->nbnd;
  for (nswaps=0; nswaps<nvtxs; nswaps++) {
    /* Exit as soon as the minimum weight crossed over */
    if (npwgts[to*ncon+imin] > minwgt)  
      break;

    if ((cnum = SelectQueueOneWay2(ncon, npwgts+to*ncon, parts, ubvec)) == -1)
      break;

    if ((higain = PQueueGetMax(&parts[cnum][0])) == -1)
      higain = PQueueGetMax(&parts[cnum][1]);

    mincut -= (ed[higain]-id[higain]);
    saxpy(ncon, 1.0, nvwgt+higain*ncon, 1, npwgts+to*ncon, 1);
    saxpy(ncon, -1.0, nvwgt+higain*ncon, 1, npwgts+from*ncon, 1);

    where[higain] = to;
    moved[higain] = nswaps;

    if (ctrl->dbglvl&DBG_MOVEINFO) {
      printf("Moved %6d from %d(%d). [%5d] %5d, NPwgts: ", higain, from, cnum, ed[higain]-id[higain], mincut);
      for (l=0; l<ncon; l++) 
        printf("(%.3f, %.3f) ", npwgts[l], npwgts[ncon+l]);
      printf(", LB: %.3f\n", ComputeLoadImbalance(ncon, 2, npwgts, tpwgts));
      if (ed[higain] == 0 && id[higain] > 0)
        printf("\t Pulled from the interior!\n");
    }


    /**************************************************************
    * Update the id[i]/ed[i] values of the affected nodes
    ***************************************************************/
    SWAP(id[higain], ed[higain], tmp);
    if (ed[higain] == 0 && bndptr[higain] != -1 && xadj[higain] < xadj[higain+1]) 
      BNDDelete(nbnd, bndind,  bndptr, higain);
    if (ed[higain] > 0 && bndptr[higain] == -1)
      BNDInsert(nbnd, bndind,  bndptr, higain);

    for (j=xadj[higain]; j<xadj[higain+1]; j++) {
      k = adjncy[j];
      oldgain = ed[k]-id[k];

      kwgt = (to == where[k] ? adjwgt[j] : -adjwgt[j]);
      INC_DEC(id[k], ed[k], kwgt);

      /* Update the queue position */
      if (moved[k] == -1 && where[k] == from) {
        if (ed[k] > 0 && bndptr[k] == -1) {  /* It moves in boundary */
          PQueueDelete(&parts[qnum[k]][1], k, oldgain);
          PQueueInsert(&parts[qnum[k]][0], k, ed[k]-id[k]);
        }
        else { /* It must be in the boundary already */
          if (bndptr[k] == -1)
            printf("What you thought was wrong!\n");
          PQueueUpdate(&parts[qnum[k]][0], k, oldgain, ed[k]-id[k]);
        }
      }

      /* Update its boundary information */
      if (ed[k] == 0 && bndptr[k] != -1) 
        BNDDelete(nbnd, bndind, bndptr, k);
      else if (ed[k] > 0 && bndptr[k] == -1)  
        BNDInsert(nbnd, bndind, bndptr, k);
    }

    ASSERTP(ComputeCut(graph, where) == mincut, ("%d != %d\n", ComputeCut(graph, where), mincut));

  }

  if (ctrl->dbglvl&DBG_REFINE) {
    printf("\tMincut: %6d, NBND: %6d, NPwgts: ", mincut, nbnd);
    for (l=0; l<ncon; l++)
      printf("(%.3f, %.3f) ", npwgts[l], npwgts[ncon+l]);
    printf(", LB: %.3f\n", ComputeLoadImbalance(ncon, 2, npwgts, tpwgts));
  }

  graph->mincut = mincut;
  graph->nbnd = nbnd;

  for (i=0; i<ncon; i++) {
    PQueueFree(ctrl, &parts[i][0]);
    PQueueFree(ctrl, &parts[i][1]);
  }

  ASSERT(ComputeCut(graph, where) == graph->mincut);
  ASSERT(CheckBnd(graph));

  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
}
예제 #22
0
/*************************************************************************
* This function computes the initial id/ed 
**************************************************************************/
void ComputeKWayVolGains(CtrlType *ctrl, GraphType *graph, int nparts)
{
  int i, ii, j, k, kk, l, nvtxs, me, other, pid, myndegrees; 
  idxtype *xadj, *vsize, *adjncy, *adjwgt, *where, *bndind, *bndptr, *ophtable;
  VRInfoType *rinfo, *myrinfo, *orinfo;
  VEDegreeType *myedegrees, *oedegrees;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  vsize = graph->vsize;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;

  where = graph->where;
  bndind = graph->bndind;
  bndptr = idxset(nvtxs, -1, graph->bndptr);
  rinfo = graph->vrinfo;

  ophtable = idxset(nparts, -1, idxwspacemalloc(ctrl, nparts));

  /*------------------------------------------------------------
  / Compute now the iv/ev degrees
  /------------------------------------------------------------*/
  graph->minvol = graph->nbnd = 0;
  for (i=0; i<nvtxs; i++) {
    myrinfo = rinfo+i;
    myrinfo->gv = -MAXIDX;

    if (myrinfo->ndegrees > 0) {
      me = where[i];
      myedegrees = myrinfo->edegrees;
      myndegrees = myrinfo->ndegrees;

      graph->minvol += myndegrees*vsize[i];

      for (j=xadj[i]; j<xadj[i+1]; j++) {
        ii = adjncy[j];
        other = where[ii];
        orinfo = rinfo+ii;
        oedegrees = orinfo->edegrees;

        for (k=0; k<orinfo->ndegrees; k++) 
          ophtable[oedegrees[k].pid] = k;
        ophtable[other] = 1;  /* this is to simplify coding */

        if (me == other) {
          /* Find which domains 'i' is connected and 'ii' is not and update their gain */
          for (k=0; k<myndegrees; k++) {
            if (ophtable[myedegrees[k].pid] == -1)
              myedegrees[k].gv -= vsize[ii];
          }
        }
        else {
          ASSERT(ophtable[me] != -1);

          if (oedegrees[ophtable[me]].ned == 1) { /* I'm the only connection of 'ii' in 'me' */
            /* Increase the gains for all the common domains between 'i' and 'ii' */
            for (k=0; k<myndegrees; k++) {
              if (ophtable[myedegrees[k].pid] != -1) 
                myedegrees[k].gv += vsize[ii];
            }
          }
          else {
            /* Find which domains 'i' is connected and 'ii' is not and update their gain */
            for (k=0; k<myndegrees; k++) {
              if (ophtable[myedegrees[k].pid] == -1) 
                myedegrees[k].gv -= vsize[ii];
            }
          }
        }

        for (kk=0; kk<orinfo->ndegrees; kk++) 
          ophtable[oedegrees[kk].pid] = -1;
        ophtable[other] = -1;
      }

      /* Compute the max vgain */
      for (k=0; k<myndegrees; k++) {
        if (myedegrees[k].gv > myrinfo->gv)
          myrinfo->gv = myedegrees[k].gv;
      }
    }

    if (myrinfo->ed > 0 && myrinfo->id == 0) 
      myrinfo->gv += vsize[i];

    if (myrinfo->gv >= 0 || myrinfo->ed-myrinfo->id >= 0)
      BNDInsert(graph->nbnd, bndind, bndptr, i);
  }

  idxwspacefree(ctrl, nparts);

}
예제 #23
0
/*************************************************************************
* This function finds all the connected components induced by the 
* partitioning vector in wgraph->where and tries to push them around to 
* remove some of them
**************************************************************************/
void EliminateComponents(CtrlType *ctrl, GraphType *graph, int nparts, float *tpwgts, float ubfactor)
{
  int i, ii, j, jj, k, me, nvtxs, tvwgt, first, last, nleft, ncmps, cwgt, other, target, deltawgt;
  idxtype *xadj, *adjncy, *vwgt, *adjwgt, *where, *pwgts, *maxpwgt;
  idxtype *cpvec, *touched, *perm, *todo, *cind, *cptr, *npcmps;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  adjncy = graph->adjncy;
  vwgt = graph->vwgt;
  adjwgt = graph->adjwgt;

  where = graph->where;
  pwgts = graph->pwgts;

  touched = idxset(nvtxs, 0, idxwspacemalloc(ctrl, nvtxs));
  cptr    = idxwspacemalloc(ctrl, nvtxs+1);
  cind    = idxwspacemalloc(ctrl, nvtxs);
  perm    = idxwspacemalloc(ctrl, nvtxs);
  todo    = idxwspacemalloc(ctrl, nvtxs);
  maxpwgt = idxwspacemalloc(ctrl, nparts);
  cpvec   = idxwspacemalloc(ctrl, nparts);
  npcmps  = idxset(nparts, 0, idxwspacemalloc(ctrl, nparts));

  for (i=0; i<nvtxs; i++) 
    perm[i] = todo[i] = i;

  /* Find the connected componends induced by the partition */
  ncmps = -1;
  first = last = 0;
  nleft = nvtxs;
  while (nleft > 0) {
    if (first == last) { /* Find another starting vertex */
      cptr[++ncmps] = first;
      ASSERT(touched[todo[0]] == 0);
      i = todo[0];
      cind[last++] = i;
      touched[i] = 1;
      me = where[i];
      npcmps[me]++;
    }

    i = cind[first++];
    k = perm[i];
    j = todo[k] = todo[--nleft];
    perm[j] = k;

    for (j=xadj[i]; j<xadj[i+1]; j++) {
      k = adjncy[j];
      if (where[k] == me && !touched[k]) {
        cind[last++] = k;
        touched[k] = 1;
      }
    }
  }
  cptr[++ncmps] = first;

  /* printf("I found %d components, for this %d-way partition\n", ncmps, nparts); */

  if (ncmps > nparts) { /* There are more components than processors */
    /* First determine the max allowed load imbalance */
    tvwgt = idxsum(nparts, pwgts);
    for (i=0; i<nparts; i++)
      maxpwgt[i] = ubfactor*tpwgts[i]*tvwgt;

    deltawgt = 5;

    for (i=0; i<ncmps; i++) {
      me = where[cind[cptr[i]]];  /* Get the domain of this component */
      if (npcmps[me] == 1)
        continue;  /* Skip it because it is contigous */

      /*printf("Trying to move %d from %d\n", i, me); */

      /* Determine the weight of the block to be moved and abort if too high */
      for (cwgt=0, j=cptr[i]; j<cptr[i+1]; j++) 
        cwgt += vwgt[cind[j]];

      if (cwgt > .30*pwgts[me])
        continue;  /* Skip the component if it is over 30% of the weight */

      /* Determine the connectivity */
      idxset(nparts, 0, cpvec);
      for (j=cptr[i]; j<cptr[i+1]; j++) {
        ii = cind[j];
        for (jj=xadj[ii]; jj<xadj[ii+1]; jj++) 
          cpvec[where[adjncy[jj]]] += adjwgt[jj];
      }
      cpvec[me] = 0;

      target = -1;
      for (j=0; j<nparts; j++) {
        if (cpvec[j] > 0 && (cwgt < deltawgt || pwgts[j] + cwgt < maxpwgt[j])) {
          if (target == -1 || cpvec[target] < cpvec[j])
            target = j;
        }
      }

      /* printf("\tMoving it to %d [%d]\n", target, cpvec[target]);*/

      if (target != -1) {
        /* Assign all the vertices of 'me' to 'target' and update data structures */
        INC_DEC(pwgts[target], pwgts[me], cwgt);
        npcmps[me]--;

        MoveGroup(ctrl, graph, nparts, target, i, cptr, cind);
      }
    }

  }

  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nparts);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs+1);

}
예제 #24
0
파일: mmatch.c 프로젝트: rtouzani/ofeli
/*************************************************************************
* This function finds a matching using the HEM heuristic
**************************************************************************/
void MCMatch_SHEM(CtrlType *ctrl, GraphType *graph)
{
  int i, ii, j, k, nvtxs, cnvtxs, ncon, maxidx, maxwgt, avgdegree;
  idxtype *xadj, *adjncy, *adjwgt;
  idxtype *match, *cmap, *degrees, *perm, *tperm;
  float *nvwgt;

  IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->MatchTmr));

  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  nvwgt = graph->nvwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;

  cmap = graph->cmap;
  match = idxset(nvtxs, UNMATCHED, idxwspacemalloc(ctrl, nvtxs));

  perm = idxwspacemalloc(ctrl, nvtxs);
  tperm = idxwspacemalloc(ctrl, nvtxs);
  degrees = idxwspacemalloc(ctrl, nvtxs);

  RandomPermute(nvtxs, tperm, 1);
  avgdegree = (int)(0.7*(xadj[nvtxs]/nvtxs));
  for (i=0; i<nvtxs; i++) 
    degrees[i] = (xadj[i+1]-xadj[i] > avgdegree ? avgdegree : xadj[i+1]-xadj[i]);
  BucketSortKeysInc(nvtxs, avgdegree, degrees, tperm, perm);

  cnvtxs = 0;

  /* Take care any islands. Islands are matched with non-islands due to coarsening */
  for (ii=0; ii<nvtxs; ii++) {
    i = perm[ii];

    if (match[i] == UNMATCHED) {  /* Unmatched */
      if (xadj[i] < xadj[i+1])
        break;

      maxidx = i;
      for (j=nvtxs-1; j>ii; j--) {
        k = perm[j];
        if (match[k] == UNMATCHED && xadj[k] < xadj[k+1]) {
          maxidx = k;
          break;
        }
      }

      cmap[i] = cmap[maxidx] = cnvtxs++;
      match[i] = maxidx;
      match[maxidx] = i;
    }
  }

  /* Continue with normal matching */
  for (; ii<nvtxs; ii++) {
    i = perm[ii];

    if (match[i] == UNMATCHED) {  /* Unmatched */
      maxidx = i;
      maxwgt = 0;

      /* Find a heavy-edge matching, subject to maxvwgt constraints */
      for (j=xadj[i]; j<xadj[i+1]; j++) {
        k = adjncy[j];
        if (match[k] == UNMATCHED && maxwgt <= adjwgt[j] &&
               AreAllVwgtsBelowFast(ncon, nvwgt+i*ncon, nvwgt+k*ncon, ctrl->nmaxvwgt)) {
          maxwgt = adjwgt[j];
          maxidx = adjncy[j];
        }
      }

      cmap[i] = cmap[maxidx] = cnvtxs++;
      match[i] = maxidx;
      match[maxidx] = i;
    }
  }

  IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->MatchTmr));

  idxwspacefree(ctrl, nvtxs);  /* degrees */
  idxwspacefree(ctrl, nvtxs);  /* tperm */

  CreateCoarseGraph(ctrl, graph, cnvtxs, match, perm);

  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
}
예제 #25
0
/*************************************************************************
* This function performs an edge-based FM refinement
**************************************************************************/
void MocGeneral2WayBalance2(CtrlType *ctrl, GraphType *graph, float *tpwgts, float *ubvec)
{
  idxtype i, ii, j, k, l, kwgt, nvtxs, ncon, nbnd, nswaps, from, to, pass, me, limit, tmp, cnum;
  idxtype *xadj, *adjncy, *adjwgt, *where, *id, *ed, *bndptr, *bndind;
  idxtype *moved, *swaps, *perm, *qnum;
  float *nvwgt, *npwgts, origbal[MAXNCON], minbal[MAXNCON], newbal[MAXNCON];
  PQueueType parts[MAXNCON][2];
  idxtype higain, oldgain, mincut, newcut, mincutorder;
  float *maxwgt, *minwgt, tvec[MAXNCON];


  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  nvwgt = graph->nvwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  where = graph->where;
  id = graph->id;
  ed = graph->ed;
  npwgts = graph->npwgts;
  bndptr = graph->bndptr;
  bndind = graph->bndind;

  moved = idxwspacemalloc(ctrl, nvtxs);
  swaps = idxwspacemalloc(ctrl, nvtxs);
  perm = idxwspacemalloc(ctrl, nvtxs);
  qnum = idxwspacemalloc(ctrl, nvtxs);

  limit = amin(amax(0.01*nvtxs, 15), 100);

  /* Setup the weight intervals of the two subdomains */
  minwgt = fwspacemalloc(ctrl, 2*ncon);
  maxwgt = fwspacemalloc(ctrl, 2*ncon);

  for (i=0; i<2; i++) {
    for (j=0; j<ncon; j++) {
      maxwgt[i*ncon+j] = tpwgts[i]*ubvec[j];
      minwgt[i*ncon+j] = tpwgts[i]*(1.0/ubvec[j]);
    }
  }


  /* Initialize the queues */
  for (i=0; i<ncon; i++) {
    PQueueInit(ctrl, &parts[i][0], nvtxs, PLUS_GAINSPAN+1);
    PQueueInit(ctrl, &parts[i][1], nvtxs, PLUS_GAINSPAN+1);
  }
  for (i=0; i<nvtxs; i++)
    qnum[i] = gk_fargmax(ncon, nvwgt+i*ncon);

  Compute2WayHLoadImbalanceVec(ncon, npwgts, tpwgts, origbal);
  for (i=0; i<ncon; i++) 
    minbal[i] = origbal[i];

  newcut = mincut = graph->mincut;
  mincutorder = -1;

  if (ctrl->dbglvl&DBG_REFINE) {
    mprintf("Parts: [");
    for (l=0; l<ncon; l++)
      mprintf("(%.3f, %.3f) ", npwgts[l], npwgts[ncon+l]);
    mprintf("] T[%.3f %.3f], Nv-Nb[%5D, %5D]. ICut: %6D, LB: ", tpwgts[0], tpwgts[1], 
            graph->nvtxs, graph->nbnd, graph->mincut);
    for (i=0; i<ncon; i++)
      mprintf("%.3f ", origbal[i]);
    mprintf("[B]\n");
  }

  idxset(nvtxs, -1, moved);

  ASSERT(ComputeCut(graph, where) == graph->mincut);
  ASSERT(CheckBnd(graph));

  /* Insert all nodes in the priority queues */
  nbnd = graph->nbnd;
  RandomPermute(nvtxs, perm, 1);
  for (ii=0; ii<nvtxs; ii++) {
    i = perm[ii];
    PQueueInsert(&parts[qnum[i]][where[i]], i, ed[i]-id[i]);
  }


  for (nswaps=0; nswaps<nvtxs; nswaps++) {
    if (AreAllBelow(ncon, minbal, ubvec))
      break;

    SelectQueue3(ncon, npwgts, tpwgts, &from, &cnum, parts, maxwgt);
    to = (from+1)%2;

    if (from == -1 || (higain = PQueueGetMax(&parts[cnum][from])) == -1)
      break;

    gk_faxpy(ncon, 1.0, nvwgt+higain*ncon, 1, npwgts+to*ncon, 1);
    gk_faxpy(ncon, -1.0, nvwgt+higain*ncon, 1, npwgts+from*ncon, 1);
    newcut -= (ed[higain]-id[higain]);
    Compute2WayHLoadImbalanceVec(ncon, npwgts, tpwgts, newbal);

    if (IsBetter2wayBalance(ncon, newbal, minbal, ubvec) || 
        (IsBetter2wayBalance(ncon, newbal, origbal, ubvec) && newcut < mincut)) {
      mincut = newcut;
      for (i=0; i<ncon; i++) 
        minbal[i] = newbal[i];
      mincutorder = nswaps;
    }
    else if (nswaps-mincutorder > limit) { /* We hit the limit, undo last move */
      newcut += (ed[higain]-id[higain]);
      gk_faxpy(ncon, 1.0, nvwgt+higain*ncon, 1, npwgts+from*ncon, 1);
      gk_faxpy(ncon, -1.0, nvwgt+higain*ncon, 1, npwgts+to*ncon, 1);
      break;
    }

    where[higain] = to;
    moved[higain] = nswaps;
    swaps[nswaps] = higain;

    if (ctrl->dbglvl&DBG_MOVEINFO) {
      mprintf("Moved %6D from %D(%D). Gain: %5D, Cut: %5D, NPwgts: ", higain, from, cnum, ed[higain]-id[higain], newcut);
      for (i=0; i<ncon; i++) 
        mprintf("(%.3f, %.3f) ", npwgts[i], npwgts[ncon+i]);

      Compute2WayHLoadImbalanceVec(ncon, npwgts, tpwgts, tvec);
      mprintf(", LB: ");
      for (i=0; i<ncon; i++) 
        mprintf("%.3f ", tvec[i]);
      if (mincutorder == nswaps)
        mprintf(" *\n");
      else
        mprintf("\n");
    }


    /**************************************************************
    * Update the id[i]/ed[i] values of the affected nodes
    ***************************************************************/
    SWAP(id[higain], ed[higain], tmp);
    if (ed[higain] == 0 && bndptr[higain] != -1 && xadj[higain] < xadj[higain+1]) 
      BNDDelete(nbnd, bndind,  bndptr, higain);
    if (ed[higain] > 0 && bndptr[higain] == -1)
      BNDInsert(nbnd, bndind,  bndptr, higain);

    for (j=xadj[higain]; j<xadj[higain+1]; j++) {
      k = adjncy[j];
      oldgain = ed[k]-id[k];

      kwgt = (to == where[k] ? adjwgt[j] : -adjwgt[j]);
      INC_DEC(id[k], ed[k], kwgt);

      /* Update the queue position */
      if (moved[k] == -1)
        PQueueUpdate(&parts[qnum[k]][where[k]], k, oldgain, ed[k]-id[k]);

      /* Update its boundary information */
      if (ed[k] == 0 && bndptr[k] != -1) 
        BNDDelete(nbnd, bndind, bndptr, k);
      else if (ed[k] > 0 && bndptr[k] == -1)  
        BNDInsert(nbnd, bndind, bndptr, k);
    }
   
  }



  /****************************************************************
  * Roll back computations
  *****************************************************************/
  for (i=0; i<nswaps; i++)
    moved[swaps[i]] = -1;  /* reset moved array */
  for (nswaps--; nswaps>mincutorder; nswaps--) {
    higain = swaps[nswaps];

    to = where[higain] = (where[higain]+1)%2;
    SWAP(id[higain], ed[higain], tmp);
    if (ed[higain] == 0 && bndptr[higain] != -1 && xadj[higain] < xadj[higain+1])
      BNDDelete(nbnd, bndind,  bndptr, higain);
    else if (ed[higain] > 0 && bndptr[higain] == -1)
      BNDInsert(nbnd, bndind,  bndptr, higain);

    gk_faxpy(ncon, 1.0, nvwgt+higain*ncon, 1, npwgts+to*ncon, 1);
    gk_faxpy(ncon, -1.0, nvwgt+higain*ncon, 1, npwgts+((to+1)%2)*ncon, 1);
    for (j=xadj[higain]; j<xadj[higain+1]; j++) {
      k = adjncy[j];

      kwgt = (to == where[k] ? adjwgt[j] : -adjwgt[j]);
      INC_DEC(id[k], ed[k], kwgt);

      if (bndptr[k] != -1 && ed[k] == 0)
        BNDDelete(nbnd, bndind, bndptr, k);
      if (bndptr[k] == -1 && ed[k] > 0)
        BNDInsert(nbnd, bndind, bndptr, k);
    }
  }

  if (ctrl->dbglvl&DBG_REFINE) {
    mprintf("\tMincut: %6D at %5D, NBND: %6D, NPwgts: [", mincut, mincutorder, nbnd);
    for (i=0; i<ncon; i++)
      mprintf("(%.3f, %.3f) ", npwgts[i], npwgts[ncon+i]);
    mprintf("], LB: ");
    Compute2WayHLoadImbalanceVec(ncon, npwgts, tpwgts, tvec);
    for (i=0; i<ncon; i++) 
      mprintf("%.3f ", tvec[i]);
    mprintf("\n");
  }

  graph->mincut = mincut;
  graph->nbnd = nbnd;


  for (i=0; i<ncon; i++) {
    PQueueFree(ctrl, &parts[i][0]);
    PQueueFree(ctrl, &parts[i][1]);
  }

  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  idxwspacefree(ctrl, nvtxs);
  fwspacefree(ctrl, 2*ncon);
  fwspacefree(ctrl, 2*ncon);

}