/***************************************************************************
* ms_parse_raw:
*
* Parse and verify a SEED data record header (fixed section and
* blockettes) at the lowest level, printing error messages for
* invalid header values and optionally print raw header values. The
* memory at 'record' is assumed to be a Mini-SEED record. Not every
* possible test is performed, common errors and those causing
* libmseed parsing to fail should be detected.
*
* The 'details' argument is interpreted as follows:
*
* details:
* 0 = only print error messages for invalid header fields
* 1 = print basic fields in addition to invalid field errors
* 2 = print all fields in addition to invalid field errors
*
* The 'swapflag' argument is interpreted as follows:
*
* swapflag:
* 1 = swap multibyte quantities
* 0 = do no swapping
* -1 = autodetect byte order using year test, swap if needed
*
* Any byte swapping performed by this routine is applied directly to
* the memory reference by the record pointer.
*
* This routine is primarily intended to diagnose invalid Mini-SEED headers.
*
* Returns 0 when no errors were detected or a positive count of
* errors detected.
***************************************************************************/
int
ms_parse_raw ( char *record, int maxreclen, flag details, flag swapflag )
{
struct fsdh_s *fsdh;
double nomsamprate;
char srcname[50];
char *X;
char b;
int retval = 0;
int b1000encoding = -1;
int b1000reclen = -1;
int endofblockettes = -1;
int idx;
if ( ! record )
return 1;
/* Generate a source name string */
srcname[0] = '\0';
ms_recsrcname (record, srcname, 1);
fsdh = (struct fsdh_s *) record;
/* Check to see if byte swapping is needed by testing the year */
if ( swapflag == -1 &&
((fsdh->start_time.year < 1900) ||
(fsdh->start_time.year > 2050)) )
swapflag = 1;
else
swapflag = 0;
if ( details > 1 )
{
if ( swapflag == 1 )
ms_log (0, "Swapping multi-byte quantities in header\n");
else
ms_log (0, "Not swapping multi-byte quantities in header\n");
}
/* Swap byte order */
if ( swapflag )
{
MS_SWAPBTIME (&fsdh->start_time);
ms_gswap2a (&fsdh->numsamples);
ms_gswap2a (&fsdh->samprate_fact);
ms_gswap2a (&fsdh->samprate_mult);
ms_gswap4a (&fsdh->time_correct);
ms_gswap2a (&fsdh->data_offset);
ms_gswap2a (&fsdh->blockette_offset);
}
/* Validate fixed section header fields */
X = record; /* Pointer of convenience */
/* Check record sequence number, 6 ASCII digits */
if ( ! isdigit((unsigned char) *(X)) || ! isdigit ((unsigned char) *(X+1)) ||
! isdigit((unsigned char) *(X+2)) || ! isdigit ((unsigned char) *(X+3)) ||
! isdigit((unsigned char) *(X+4)) || ! isdigit ((unsigned char) *(X+5)) )
{
ms_log (2, "%s: Invalid sequence number: '%c%c%c%c%c%c'\n", srcname, X, X+1, X+2, X+3, X+4, X+5);
retval++;
}
/* Check header/quality indicator */
if ( ! MS_ISDATAINDICATOR(*(X+6)) )
{
ms_log (2, "%s: Invalid header indicator (DRQM): '%c'\n", srcname, X+6);
retval++;
}
/* Check reserved byte, space or NULL */
if ( ! (*(X+7) == ' ' || *(X+7) == '\0') )
{
ms_log (2, "%s: Invalid fixed section reserved byte (Space): '%c'\n", srcname, X+7);
retval++;
}
/* Check station code, 5 alphanumerics or spaces */
if ( ! (isalnum((unsigned char) *(X+8)) || *(X+8) == ' ') ||
! (isalnum((unsigned char) *(X+9)) || *(X+9) == ' ') ||
! (isalnum((unsigned char) *(X+10)) || *(X+10) == ' ') ||
! (isalnum((unsigned char) *(X+11)) || *(X+11) == ' ') ||
! (isalnum((unsigned char) *(X+12)) || *(X+12) == ' ') )
{
ms_log (2, "%s: Invalid station code: '%c%c%c%c%c'\n", srcname, X+8, X+9, X+10, X+11, X+12);
retval++;
}
/* Check location ID, 2 alphanumerics or spaces */
if ( ! (isalnum((unsigned char) *(X+13)) || *(X+13) == ' ') ||
! (isalnum((unsigned char) *(X+14)) || *(X+14) == ' ') )
{
ms_log (2, "%s: Invalid location ID: '%c%c'\n", srcname, X+13, X+14);
retval++;
}
/* Check channel codes, 3 alphanumerics or spaces */
if ( ! (isalnum((unsigned char) *(X+15)) || *(X+15) == ' ') ||
! (isalnum((unsigned char) *(X+16)) || *(X+16) == ' ') ||
! (isalnum((unsigned char) *(X+17)) || *(X+17) == ' ') )
{
ms_log (2, "%s: Invalid channel codes: '%c%c%c'\n", srcname, X+15, X+16, X+17);
retval++;
}
/* Check network code, 2 alphanumerics or spaces */
if ( ! (isalnum((unsigned char) *(X+18)) || *(X+18) == ' ') ||
! (isalnum((unsigned char) *(X+19)) || *(X+19) == ' ') )
{
ms_log (2, "%s: Invalid network code: '%c%c'\n", srcname, X+18, X+19);
retval++;
}
/* Check start time fields */
if ( fsdh->start_time.year < 1920 || fsdh->start_time.year > 2050 )
{
ms_log (2, "%s: Unlikely start year (1920-2050): '%d'\n", srcname, fsdh->start_time.year);
retval++;
}
if ( fsdh->start_time.day < 1 || fsdh->start_time.day > 366 )
{
ms_log (2, "%s: Invalid start day (1-366): '%d'\n", srcname, fsdh->start_time.day);
retval++;
}
if ( fsdh->start_time.hour > 23 )
{
ms_log (2, "%s: Invalid start hour (0-23): '%d'\n", srcname, fsdh->start_time.hour);
retval++;
}
if ( fsdh->start_time.min > 59 )
{
ms_log (2, "%s: Invalid start minute (0-59): '%d'\n", srcname, fsdh->start_time.min);
retval++;
}
if ( fsdh->start_time.sec > 60 )
{
ms_log (2, "%s: Invalid start second (0-60): '%d'\n", srcname, fsdh->start_time.sec);
retval++;
}
if ( fsdh->start_time.fract > 9999 )
{
ms_log (2, "%s: Invalid start fractional seconds (0-9999): '%d'\n", srcname, fsdh->start_time.fract);
retval++;
}
/* Check number of samples, max samples in 4096-byte Steim-2 encoded record: 6601 */
if ( fsdh->numsamples > 20000 )
{
ms_log (2, "%s: Unlikely number of samples (>20000): '%d'\n", srcname, fsdh->numsamples);
retval++;
}
/* Sanity check that there is space for blockettes when both data and blockettes are present */
if ( fsdh->numsamples > 0 && fsdh->numblockettes > 0 && fsdh->data_offset <= fsdh->blockette_offset )
{
ms_log (2, "%s: No space for %d blockettes, data offset: %d, blockette offset: %d\n", srcname,
fsdh->numblockettes, fsdh->data_offset, fsdh->blockette_offset);
retval++;
}
/* Print raw header details */
if ( details >= 1 )
{
/* Determine nominal sample rate */
nomsamprate = ms_nomsamprate (fsdh->samprate_fact, fsdh->samprate_mult);
/* Print header values */
ms_log (0, "RECORD -- %s\n", srcname);
ms_log (0, " sequence number: '%c%c%c%c%c%c'\n", fsdh->sequence_number[0], fsdh->sequence_number[1], fsdh->sequence_number[2],
fsdh->sequence_number[3], fsdh->sequence_number[4], fsdh->sequence_number[5]);
ms_log (0, " data quality indicator: '%c'\n", fsdh->dataquality);
if ( details > 0 )
ms_log (0, " reserved: '%c'\n", fsdh->reserved);
ms_log (0, " station code: '%c%c%c%c%c'\n", fsdh->station[0], fsdh->station[1], fsdh->station[2], fsdh->station[3], fsdh->station[4]);
ms_log (0, " location ID: '%c%c'\n", fsdh->location[0], fsdh->location[1]);
ms_log (0, " channel codes: '%c%c%c'\n", fsdh->channel[0], fsdh->channel[1], fsdh->channel[2]);
ms_log (0, " network code: '%c%c'\n", fsdh->network[0], fsdh->network[1]);
ms_log (0, " start time: %d,%d,%d:%d:%d.%04d (unused: %d)\n", fsdh->start_time.year, fsdh->start_time.day,
fsdh->start_time.hour, fsdh->start_time.min, fsdh->start_time.sec, fsdh->start_time.fract, fsdh->start_time.unused);
ms_log (0, " number of samples: %d\n", fsdh->numsamples);
ms_log (0, " sample rate factor: %d (%.10g samples per second)\n",
fsdh->samprate_fact, nomsamprate);
ms_log (0, " sample rate multiplier: %d\n", fsdh->samprate_mult);
/* Print flag details if requested */
if ( details > 1 )
{
/* Activity flags */
b = fsdh->act_flags;
ms_log (0, " activity flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] Calibration signals present\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] Time correction applied\n");
if ( b & 0x04 ) ms_log (0, " [Bit 2] Beginning of an event, station trigger\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] End of an event, station detrigger\n");
if ( b & 0x10 ) ms_log (0, " [Bit 4] A positive leap second happened in this record\n");
if ( b & 0x20 ) ms_log (0, " [Bit 5] A negative leap second happened in this record\n");
if ( b & 0x40 ) ms_log (0, " [Bit 6] Event in progress\n");
if ( b & 0x80 ) ms_log (0, " [Bit 7] Undefined bit set\n");
/* I/O and clock flags */
b = fsdh->io_flags;
ms_log (0, " I/O and clock flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] Station volume parity error possibly present\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] Long record read (possibly no problem)\n");
if ( b & 0x04 ) ms_log (0, " [Bit 2] Short record read (record padded)\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Start of time series\n");
if ( b & 0x10 ) ms_log (0, " [Bit 4] End of time series\n");
if ( b & 0x20 ) ms_log (0, " [Bit 5] Clock locked\n");
if ( b & 0x40 ) ms_log (0, " [Bit 6] Undefined bit set\n");
if ( b & 0x80 ) ms_log (0, " [Bit 7] Undefined bit set\n");
/* Data quality flags */
b = fsdh->dq_flags;
ms_log (0, " data quality flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] Amplifier saturation detected\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] Digitizer clipping detected\n");
if ( b & 0x04 ) ms_log (0, " [Bit 2] Spikes detected\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Glitches detected\n");
if ( b & 0x10 ) ms_log (0, " [Bit 4] Missing/padded data present\n");
if ( b & 0x20 ) ms_log (0, " [Bit 5] Telemetry synchronization error\n");
if ( b & 0x40 ) ms_log (0, " [Bit 6] A digital filter may be charging\n");
if ( b & 0x80 ) ms_log (0, " [Bit 7] Time tag is questionable\n");
}
ms_log (0, " number of blockettes: %d\n", fsdh->numblockettes);
ms_log (0, " time correction: %ld\n", (long int) fsdh->time_correct);
ms_log (0, " data offset: %d\n", fsdh->data_offset);
ms_log (0, " first blockette offset: %d\n", fsdh->blockette_offset);
} /* Done printing raw header details */
/* Validate and report information in the blockette chain */
if ( fsdh->blockette_offset > 46 && fsdh->blockette_offset < maxreclen )
{
int blkt_offset = fsdh->blockette_offset;
int blkt_count = 0;
int blkt_length;
uint16_t blkt_type;
uint16_t next_blkt;
char *blkt_desc;
/* Traverse blockette chain */
while ( blkt_offset != 0 && blkt_offset < maxreclen )
{
/* Every blockette has a similar 4 byte header: type and next */
memcpy (&blkt_type, record + blkt_offset, 2);
memcpy (&next_blkt, record + blkt_offset+2, 2);
if ( swapflag )
{
ms_gswap2 (&blkt_type);
ms_gswap2 (&next_blkt);
}
/* Print common header fields */
if ( details >= 1 )
{
blkt_desc = ms_blktdesc(blkt_type);
ms_log (0, " BLOCKETTE %u: (%s)\n", blkt_type, (blkt_desc) ? blkt_desc : "Unknown");
ms_log (0, " next blockette: %u\n", next_blkt);
}
blkt_length = ms_blktlen (blkt_type, record + blkt_offset, swapflag);
if ( blkt_length == 0 )
{
ms_log (2, "%s: Unknown blockette length for type %d\n", srcname, blkt_type);
retval++;
}
/* Track end of blockette chain */
endofblockettes = blkt_offset + blkt_length - 1;
/* Sanity check that the blockette is contained in the record */
if ( endofblockettes > maxreclen )
{
ms_log (2, "%s: Blockette type %d at offset %d with length %d does not fix in record (%d)\n",
srcname, blkt_type, blkt_offset, blkt_length, maxreclen);
retval++;
break;
}
if ( blkt_type == 100 )
{
struct blkt_100_s *blkt_100 = (struct blkt_100_s *) (record + blkt_offset + 4);
if ( swapflag )
ms_gswap4 (&blkt_100->samprate);
if ( details >= 1 )
{
ms_log (0, " actual sample rate: %.10g\n", blkt_100->samprate);
if ( details > 1 )
{
b = blkt_100->flags;
ms_log (0, " undefined flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
ms_log (0, " reserved bytes (3): %u,%u,%u\n",
blkt_100->reserved[0], blkt_100->reserved[1], blkt_100->reserved[2]);
}
}
}
else if ( blkt_type == 200 )
{
struct blkt_200_s *blkt_200 = (struct blkt_200_s *) (record + blkt_offset + 4);
if ( swapflag )
{
ms_gswap4 (&blkt_200->amplitude);
ms_gswap4 (&blkt_200->period);
ms_gswap4 (&blkt_200->background_estimate);
MS_SWAPBTIME (&blkt_200->time);
}
if ( details >= 1 )
{
ms_log (0, " signal amplitude: %g\n", blkt_200->amplitude);
ms_log (0, " signal period: %g\n", blkt_200->period);
ms_log (0, " background estimate: %g\n", blkt_200->background_estimate);
if ( details > 1 )
{
b = blkt_200->flags;
ms_log (0, " event detection flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] 1: Dilatation wave\n");
else ms_log (0, " [Bit 0] 0: Compression wave\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] 1: Units after deconvolution\n");
else ms_log (0, " [Bit 1] 0: Units are digital counts\n");
if ( b & 0x04 ) ms_log (0, " [Bit 2] Bit 0 is undetermined\n");
ms_log (0, " reserved byte: %u\n", blkt_200->reserved);
}
ms_log (0, " signal onset time: %d,%d,%d:%d:%d.%04d (unused: %d)\n", blkt_200->time.year, blkt_200->time.day,
blkt_200->time.hour, blkt_200->time.min, blkt_200->time.sec, blkt_200->time.fract, blkt_200->time.unused);
ms_log (0, " detector name: %.24s\n", blkt_200->detector);
}
}
else if ( blkt_type == 201 )
{
struct blkt_201_s *blkt_201 = (struct blkt_201_s *) (record + blkt_offset + 4);
if ( swapflag )
{
ms_gswap4 (&blkt_201->amplitude);
ms_gswap4 (&blkt_201->period);
ms_gswap4 (&blkt_201->background_estimate);
MS_SWAPBTIME (&blkt_201->time);
}
if ( details >= 1 )
{
ms_log (0, " signal amplitude: %g\n", blkt_201->amplitude);
ms_log (0, " signal period: %g\n", blkt_201->period);
ms_log (0, " background estimate: %g\n", blkt_201->background_estimate);
b = blkt_201->flags;
ms_log (0, " event detection flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] 1: Dilation wave\n");
else ms_log (0, " [Bit 0] 0: Compression wave\n");
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_201->reserved);
ms_log (0, " signal onset time: %d,%d,%d:%d:%d.%04d (unused: %d)\n", blkt_201->time.year, blkt_201->time.day,
blkt_201->time.hour, blkt_201->time.min, blkt_201->time.sec, blkt_201->time.fract, blkt_201->time.unused);
ms_log (0, " SNR values: ");
for (idx=0; idx < 6; idx++) ms_log (0, "%u ", blkt_201->snr_values[idx]);
ms_log (0, "\n");
ms_log (0, " loopback value: %u\n", blkt_201->loopback);
ms_log (0, " pick algorithm: %u\n", blkt_201->pick_algorithm);
ms_log (0, " detector name: %.24s\n", blkt_201->detector);
}
}
else if ( blkt_type == 300 )
{
struct blkt_300_s *blkt_300 = (struct blkt_300_s *) (record + blkt_offset + 4);
if ( swapflag )
{
MS_SWAPBTIME (&blkt_300->time);
ms_gswap4 (&blkt_300->step_duration);
ms_gswap4 (&blkt_300->interval_duration);
ms_gswap4 (&blkt_300->amplitude);
ms_gswap4 (&blkt_300->reference_amplitude);
}
if ( details >= 1 )
{
ms_log (0, " calibration start time: %d,%d,%d:%d:%d.%04d (unused: %d)\n", blkt_300->time.year, blkt_300->time.day,
blkt_300->time.hour, blkt_300->time.min, blkt_300->time.sec, blkt_300->time.fract, blkt_300->time.unused);
ms_log (0, " number of calibrations: %u\n", blkt_300->numcalibrations);
b = blkt_300->flags;
ms_log (0, " calibration flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] First pulse is positive\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] Calibration's alternate sign\n");
if ( b & 0x04 ) ms_log (0, " [Bit 2] Calibration was automatic\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Calibration continued from previous record(s)\n");
ms_log (0, " step duration: %u\n", blkt_300->step_duration);
ms_log (0, " interval duration: %u\n", blkt_300->interval_duration);
ms_log (0, " signal amplitude: %g\n", blkt_300->amplitude);
ms_log (0, " input signal channel: %.3s", blkt_300->input_channel);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_300->reserved);
ms_log (0, " reference amplitude: %u\n", blkt_300->reference_amplitude);
ms_log (0, " coupling: %.12s\n", blkt_300->coupling);
ms_log (0, " rolloff: %.12s\n", blkt_300->rolloff);
}
}
else if ( blkt_type == 310 )
{
struct blkt_310_s *blkt_310 = (struct blkt_310_s *) (record + blkt_offset + 4);
if ( swapflag )
{
MS_SWAPBTIME (&blkt_310->time);
ms_gswap4 (&blkt_310->duration);
ms_gswap4 (&blkt_310->period);
ms_gswap4 (&blkt_310->amplitude);
ms_gswap4 (&blkt_310->reference_amplitude);
}
if ( details >= 1 )
{
ms_log (0, " calibration start time: %d,%d,%d:%d:%d.%04d (unused: %d)\n", blkt_310->time.year, blkt_310->time.day,
blkt_310->time.hour, blkt_310->time.min, blkt_310->time.sec, blkt_310->time.fract, blkt_310->time.unused);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_310->reserved1);
b = blkt_310->flags;
ms_log (0, " calibration flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x04 ) ms_log (0, " [Bit 2] Calibration was automatic\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Calibration continued from previous record(s)\n");
if ( b & 0x10 ) ms_log (0, " [Bit 4] Peak-to-peak amplitude\n");
if ( b & 0x20 ) ms_log (0, " [Bit 5] Zero-to-peak amplitude\n");
if ( b & 0x40 ) ms_log (0, " [Bit 6] RMS amplitude\n");
ms_log (0, " calibration duration: %u\n", blkt_310->duration);
ms_log (0, " signal period: %g\n", blkt_310->period);
ms_log (0, " signal amplitude: %g\n", blkt_310->amplitude);
ms_log (0, " input signal channel: %.3s", blkt_310->input_channel);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_310->reserved2);
ms_log (0, " reference amplitude: %u\n", blkt_310->reference_amplitude);
ms_log (0, " coupling: %.12s\n", blkt_310->coupling);
ms_log (0, " rolloff: %.12s\n", blkt_310->rolloff);
}
}
else if ( blkt_type == 320 )
{
struct blkt_320_s *blkt_320 = (struct blkt_320_s *) (record + blkt_offset + 4);
if ( swapflag )
{
MS_SWAPBTIME (&blkt_320->time);
ms_gswap4 (&blkt_320->duration);
ms_gswap4 (&blkt_320->ptp_amplitude);
ms_gswap4 (&blkt_320->reference_amplitude);
}
if ( details >= 1 )
{
ms_log (0, " calibration start time: %d,%d,%d:%d:%d.%04d (unused: %d)\n", blkt_320->time.year, blkt_320->time.day,
blkt_320->time.hour, blkt_320->time.min, blkt_320->time.sec, blkt_320->time.fract, blkt_320->time.unused);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_320->reserved1);
b = blkt_320->flags;
ms_log (0, " calibration flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x04 ) ms_log (0, " [Bit 2] Calibration was automatic\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Calibration continued from previous record(s)\n");
if ( b & 0x10 ) ms_log (0, " [Bit 4] Random amplitudes\n");
ms_log (0, " calibration duration: %u\n", blkt_320->duration);
ms_log (0, " peak-to-peak amplitude: %g\n", blkt_320->ptp_amplitude);
ms_log (0, " input signal channel: %.3s", blkt_320->input_channel);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_320->reserved2);
ms_log (0, " reference amplitude: %u\n", blkt_320->reference_amplitude);
ms_log (0, " coupling: %.12s\n", blkt_320->coupling);
ms_log (0, " rolloff: %.12s\n", blkt_320->rolloff);
ms_log (0, " noise type: %.8s\n", blkt_320->noise_type);
}
}
else if ( blkt_type == 390 )
{
struct blkt_390_s *blkt_390 = (struct blkt_390_s *) (record + blkt_offset + 4);
if ( swapflag )
{
MS_SWAPBTIME (&blkt_390->time);
ms_gswap4 (&blkt_390->duration);
ms_gswap4 (&blkt_390->amplitude);
}
if ( details >= 1 )
{
ms_log (0, " calibration start time: %d,%d,%d:%d:%d.%04d (unused: %d)\n", blkt_390->time.year, blkt_390->time.day,
blkt_390->time.hour, blkt_390->time.min, blkt_390->time.sec, blkt_390->time.fract, blkt_390->time.unused);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_390->reserved1);
b = blkt_390->flags;
ms_log (0, " calibration flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x04 ) ms_log (0, " [Bit 2] Calibration was automatic\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Calibration continued from previous record(s)\n");
ms_log (0, " calibration duration: %u\n", blkt_390->duration);
ms_log (0, " signal amplitude: %g\n", blkt_390->amplitude);
ms_log (0, " input signal channel: %.3s", blkt_390->input_channel);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_390->reserved2);
}
}
else if ( blkt_type == 395 )
{
struct blkt_395_s *blkt_395 = (struct blkt_395_s *) (record + blkt_offset + 4);
if ( swapflag )
MS_SWAPBTIME (&blkt_395->time);
if ( details >= 1 )
{
ms_log (0, " calibration end time: %d,%d,%d:%d:%d.%04d (unused: %d)\n", blkt_395->time.year, blkt_395->time.day,
blkt_395->time.hour, blkt_395->time.min, blkt_395->time.sec, blkt_395->time.fract, blkt_395->time.unused);
if ( details > 1 )
ms_log (0, " reserved bytes (2): %u,%u\n",
blkt_395->reserved[0], blkt_395->reserved[1]);
}
}
else if ( blkt_type == 400 )
{
struct blkt_400_s *blkt_400 = (struct blkt_400_s *) (record + blkt_offset + 4);
if ( swapflag )
{
ms_gswap4 (&blkt_400->azimuth);
ms_gswap4 (&blkt_400->slowness);
ms_gswap4 (&blkt_400->configuration);
}
if ( details >= 1 )
{
ms_log (0, " beam azimuth (degrees): %g\n", blkt_400->azimuth);
ms_log (0, " beam slowness (sec/degree): %g\n", blkt_400->slowness);
ms_log (0, " configuration: %u\n", blkt_400->configuration);
if ( details > 1 )
ms_log (0, " reserved bytes (2): %u,%u\n",
blkt_400->reserved[0], blkt_400->reserved[1]);
}
}
else if ( blkt_type == 405 )
{
struct blkt_405_s *blkt_405 = (struct blkt_405_s *) (record + blkt_offset + 4);
uint16_t firstvalue = blkt_405->delay_values[0]; /* Work on a private copy */
if ( swapflag )
ms_gswap2 (&firstvalue);
if ( details >= 1 )
ms_log (0, " first delay value: %u\n", firstvalue);
}
else if ( blkt_type == 500 )
{
struct blkt_500_s *blkt_500 = (struct blkt_500_s *) (record + blkt_offset + 4);
if ( swapflag )
{
ms_gswap4 (&blkt_500->vco_correction);
MS_SWAPBTIME (&blkt_500->time);
ms_gswap4 (&blkt_500->exception_count);
}
if ( details >= 1 )
{
ms_log (0, " VCO correction: %g%%\n", blkt_500->vco_correction);
ms_log (0, " time of exception: %d,%d,%d:%d:%d.%04d (unused: %d)\n", blkt_500->time.year, blkt_500->time.day,
blkt_500->time.hour, blkt_500->time.min, blkt_500->time.sec, blkt_500->time.fract, blkt_500->time.unused);
ms_log (0, " usec: %d\n", blkt_500->usec);
ms_log (0, " reception quality: %u%%\n", blkt_500->reception_qual);
ms_log (0, " exception count: %u\n", blkt_500->exception_count);
ms_log (0, " exception type: %.16s\n", blkt_500->exception_type);
ms_log (0, " clock model: %.32s\n", blkt_500->clock_model);
ms_log (0, " clock status: %.128s\n", blkt_500->clock_status);
}
}
else if ( blkt_type == 1000 )
{
struct blkt_1000_s *blkt_1000 = (struct blkt_1000_s *) (record + blkt_offset + 4);
char order[40];
/* Calculate record size in bytes as 2^(blkt_1000->rec_len) */
b1000reclen = (unsigned int) 1 << blkt_1000->reclen;
/* Big or little endian? */
if (blkt_1000->byteorder == 0)
strncpy (order, "Little endian", sizeof(order)-1);
else if (blkt_1000->byteorder == 1)
strncpy (order, "Big endian", sizeof(order)-1);
else
strncpy (order, "Unknown value", sizeof(order)-1);
if ( details >= 1 )
{
ms_log (0, " encoding: %s (val:%u)\n",
(char *) ms_encodingstr (blkt_1000->encoding), blkt_1000->encoding);
ms_log (0, " byte order: %s (val:%u)\n",
order, blkt_1000->byteorder);
ms_log (0, " record length: %d (val:%u)\n",
b1000reclen, blkt_1000->reclen);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_1000->reserved);
}
/* Save encoding format */
b1000encoding = blkt_1000->encoding;
/* Sanity check encoding format */
if ( ! (b1000encoding >= 0 && b1000encoding <= 5) &&
! (b1000encoding >= 10 && b1000encoding <= 19) &&
! (b1000encoding >= 30 && b1000encoding <= 33) )
{
ms_log (2, "%s: Blockette 1000 encoding format invalid (0-5,10-19,30-33): %d\n", srcname, b1000encoding);
retval++;
}
/* Sanity check byte order flag */
if ( blkt_1000->byteorder != 0 && blkt_1000->byteorder != 1 )
{
ms_log (2, "%s: Blockette 1000 byte order flag invalid (0 or 1): %d\n", srcname, blkt_1000->byteorder);
retval++;
}
}
else if ( blkt_type == 1001 )
{
struct blkt_1001_s *blkt_1001 = (struct blkt_1001_s *) (record + blkt_offset + 4);
if ( details >= 1 )
{
ms_log (0, " timing quality: %u%%\n", blkt_1001->timing_qual);
ms_log (0, " micro second: %d\n", blkt_1001->usec);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_1001->reserved);
ms_log (0, " frame count: %u\n", blkt_1001->framecnt);
}
}
else if ( blkt_type == 2000 )
{
struct blkt_2000_s *blkt_2000 = (struct blkt_2000_s *) (record + blkt_offset + 4);
char order[40];
if ( swapflag )
{
ms_gswap2 (&blkt_2000->length);
ms_gswap2 (&blkt_2000->data_offset);
ms_gswap4 (&blkt_2000->recnum);
}
/* Big or little endian? */
if (blkt_2000->byteorder == 0)
strncpy (order, "Little endian", sizeof(order)-1);
else if (blkt_2000->byteorder == 1)
strncpy (order, "Big endian", sizeof(order)-1);
else
strncpy (order, "Unknown value", sizeof(order)-1);
if ( details >= 1 )
{
ms_log (0, " blockette length: %u\n", blkt_2000->length);
ms_log (0, " data offset: %u\n", blkt_2000->data_offset);
ms_log (0, " record number: %u\n", blkt_2000->recnum);
ms_log (0, " byte order: %s (val:%u)\n",
order, blkt_2000->byteorder);
b = blkt_2000->flags;
ms_log (0, " data flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( details > 1 )
{
if ( b & 0x01 ) ms_log (0, " [Bit 0] 1: Stream oriented\n");
else ms_log (0, " [Bit 0] 0: Record oriented\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] 1: Blockette 2000s may NOT be packaged\n");
else ms_log (0, " [Bit 1] 0: Blockette 2000s may be packaged\n");
if ( ! (b & 0x04) && ! (b & 0x08) )
ms_log (0, " [Bits 2-3] 00: Complete blockette\n");
else if ( ! (b & 0x04) && (b & 0x08) )
ms_log (0, " [Bits 2-3] 01: First blockette in span\n");
else if ( (b & 0x04) && (b & 0x08) )
ms_log (0, " [Bits 2-3] 11: Continuation blockette in span\n");
else if ( (b & 0x04) && ! (b & 0x08) )
ms_log (0, " [Bits 2-3] 10: Final blockette in span\n");
if ( ! (b & 0x10) && ! (b & 0x20) )
ms_log (0, " [Bits 4-5] 00: Not file oriented\n");
else if ( ! (b & 0x10) && (b & 0x20) )
ms_log (0, " [Bits 4-5] 01: First blockette of file\n");
else if ( (b & 0x10) && ! (b & 0x20) )
ms_log (0, " [Bits 4-5] 10: Continuation of file\n");
else if ( (b & 0x10) && (b & 0x20) )
ms_log (0, " [Bits 4-5] 11: Last blockette of file\n");
}
ms_log (0, " number of headers: %u\n", blkt_2000->numheaders);
/* Crude display of the opaque data headers */
if ( details > 1 )
ms_log (0, " headers: %.*s\n",
(blkt_2000->data_offset - 15), blkt_2000->payload);
}
}
else
{
ms_log (2, "%s: Unrecognized blockette type: %d\n", srcname, blkt_type);
retval++;
}
/* Sanity check the next blockette offset */
if ( next_blkt && next_blkt <= endofblockettes )
{
ms_log (2, "%s: Next blockette offset (%d) is within current blockette ending at byte %d\n",
srcname, next_blkt, endofblockettes);
blkt_offset = 0;
}
else
{
blkt_offset = next_blkt;
}
blkt_count++;
} /* End of looping through blockettes */
/* Check that the blockette offset is within the maximum record size */
if ( blkt_offset > maxreclen )
{
ms_log (2, "%s: Blockette offset (%d) beyond maximum record length (%d)\n", srcname, blkt_offset, maxreclen);
retval++;
}
/* Check that the data and blockette offsets are within the record */
if ( b1000reclen && fsdh->data_offset > b1000reclen )
{
ms_log (2, "%s: Data offset (%d) beyond record length (%d)\n", srcname, fsdh->data_offset, b1000reclen);
retval++;
}
if ( b1000reclen && fsdh->blockette_offset > b1000reclen )
{
ms_log (2, "%s: Blockette offset (%d) beyond record length (%d)\n", srcname, fsdh->blockette_offset, b1000reclen);
retval++;
}
/* Check that the data offset is beyond the end of the blockettes */
if ( fsdh->numsamples && fsdh->data_offset <= endofblockettes )
{
ms_log (2, "%s: Data offset (%d) is within blockette chain (end of blockettes: %d)\n", srcname, fsdh->data_offset, endofblockettes);
retval++;
}
/* Check that the correct number of blockettes were parsed */
if ( fsdh->numblockettes != blkt_count )
{
ms_log (2, "%s: Specified number of blockettes (%d) not equal to those parsed (%d)\n", srcname, fsdh->numblockettes, blkt_count);
retval++;
}
}
return retval;
} /* End of ms_parse_raw() */
/************************************************************************
* msr_decode_steim2:
*
* Decode Steim2 encoded miniSEED data and place in supplied buffer
* as 32-bit integers.
*
* Return number of samples in output buffer on success, -1 on error.
************************************************************************/
int
msr_decode_steim2 (int32_t *input, int inputlength, int samplecount,
int32_t *output, int outputlength, char *srcname,
int swapflag)
{
int32_t *outputptr = output; /* Pointer to next output sample location */
uint32_t frame[16]; /* Frame, 16 x 32-bit quantities = 64 bytes */
int32_t X0 = 0; /* Forward integration constant, aka first sample */
int32_t Xn = 0; /* Reverse integration constant, aka last sample */
int32_t diff[7];
int32_t semask;
int maxframes = inputlength / 64;
int frameidx;
int startnibble;
int nibble;
int widx;
int diffcount;
int dnib;
int idx;
union dword {
int8_t d8[4];
int32_t d32;
} * word;
if (inputlength <= 0)
return 0;
if (!input || !output || outputlength <= 0 || maxframes <= 0)
return -1;
if (decodedebug)
ms_log (1, "Decoding %d Steim2 frames, swapflag: %d, srcname: %s\n",
maxframes, swapflag, (srcname) ? srcname : "");
for (frameidx = 0; frameidx < maxframes && samplecount > 0; frameidx++)
{
/* Copy frame, each is 16x32-bit quantities = 64 bytes */
memcpy (frame, input + (16 * frameidx), 64);
/* Save forward integration constant (X0) and reverse integration constant (Xn)
and set the starting nibble index depending on frame. */
if (frameidx == 0)
{
if (swapflag)
{
ms_gswap4a (&frame[1]);
ms_gswap4a (&frame[2]);
}
X0 = frame[1];
Xn = frame[2];
startnibble = 3; /* First frame: skip nibbles, X0, and Xn */
if (decodedebug)
ms_log (1, "Frame %d: X0=%d Xn=%d\n", frameidx, X0, Xn);
}
else
{
startnibble = 1; /* Subsequent frames: skip nibbles */
if (decodedebug)
ms_log (1, "Frame %d\n", frameidx);
}
/* Swap 32-bit word containing the nibbles */
if (swapflag)
ms_gswap4a (&frame[0]);
/* Decode each 32-bit word according to nibble */
for (widx = startnibble; widx < 16 && samplecount > 0; widx++)
{
/* W0: the first 32-bit quantity contains 16 x 2-bit nibbles */
nibble = EXTRACTBITRANGE (frame[0], (30 - (2 * widx)), 2);
diffcount = 0;
switch (nibble)
{
case 0: /* nibble=00: Special flag, no differences */
if (decodedebug)
ms_log (1, " W%02d: 00=special\n", widx);
break;
case 1: /* nibble=01: Four 1-byte differences */
diffcount = 4;
word = (union dword *)&frame[widx];
for (idx = 0; idx < diffcount; idx++)
{
diff[idx] = word->d8[idx];
}
if (decodedebug)
ms_log (1, " W%02d: 01=4x8b %d %d %d %d\n", widx, diff[0], diff[1], diff[2], diff[3]);
break;
case 2: /* nibble=10: Must consult dnib, the high order two bits */
if (swapflag)
ms_gswap4a (&frame[widx]);
dnib = EXTRACTBITRANGE (frame[widx], 30, 2);
switch (dnib)
{
case 0: /* nibble=10, dnib=00: Error, undefined value */
ms_log (2, "%s: Impossible Steim2 dnib=00 for nibble=10\n", srcname);
return -1;
break;
case 1: /* nibble=10, dnib=01: One 30-bit difference */
diffcount = 1;
semask = 1U << (30 - 1); /* Sign extension from bit 30 */
diff[0] = EXTRACTBITRANGE (frame[widx], 0, 30);
diff[0] = (diff[0] ^ semask) - semask;
if (decodedebug)
ms_log (1, " W%02d: 10,01=1x30b %d\n", widx, diff[0]);
break;
case 2: /* nibble=10, dnib=10: Two 15-bit differences */
diffcount = 2;
semask = 1U << (15 - 1); /* Sign extension from bit 15 */
for (idx = 0; idx < diffcount; idx++)
{
diff[idx] = EXTRACTBITRANGE (frame[widx], (15 - idx * 15), 15);
diff[idx] = (diff[idx] ^ semask) - semask;
}
if (decodedebug)
ms_log (1, " W%02d: 10,10=2x15b %d %d\n", widx, diff[0], diff[1]);
break;
case 3: /* nibble=10, dnib=11: Three 10-bit differences */
diffcount = 3;
semask = 1U << (10 - 1); /* Sign extension from bit 10 */
for (idx = 0; idx < diffcount; idx++)
{
diff[idx] = EXTRACTBITRANGE (frame[widx], (20 - idx * 10), 10);
diff[idx] = (diff[idx] ^ semask) - semask;
}
if (decodedebug)
ms_log (1, " W%02d: 10,11=3x10b %d %d %d\n", widx, diff[0], diff[1], diff[2]);
break;
}
break;
case 3: /* nibble=11: Must consult dnib, the high order two bits */
if (swapflag)
ms_gswap4a (&frame[widx]);
dnib = EXTRACTBITRANGE (frame[widx], 30, 2);
switch (dnib)
{
case 0: /* nibble=11, dnib=00: Five 6-bit differences */
diffcount = 5;
semask = 1U << (6 - 1); /* Sign extension from bit 6 */
for (idx = 0; idx < diffcount; idx++)
{
diff[idx] = EXTRACTBITRANGE (frame[widx], (24 - idx * 6), 6);
diff[idx] = (diff[idx] ^ semask) - semask;
}
if (decodedebug)
ms_log (1, " W%02d: 11,00=5x6b %d %d %d %d %d\n",
widx, diff[0], diff[1], diff[2], diff[3], diff[4]);
break;
case 1: /* nibble=11, dnib=01: Six 5-bit differences */
diffcount = 6;
semask = 1U << (5 - 1); /* Sign extension from bit 5 */
for (idx = 0; idx < diffcount; idx++)
{
diff[idx] = EXTRACTBITRANGE (frame[widx], (25 - idx * 5), 5);
diff[idx] = (diff[idx] ^ semask) - semask;
}
if (decodedebug)
ms_log (1, " W%02d: 11,01=6x5b %d %d %d %d %d %d\n",
widx, diff[0], diff[1], diff[2], diff[3], diff[4], diff[5]);
break;
case 2: /* nibble=11, dnib=10: Seven 4-bit differences */
diffcount = 7;
semask = 1U << (4 - 1); /* Sign extension from bit 4 */
for (idx = 0; idx < diffcount; idx++)
{
diff[idx] = EXTRACTBITRANGE (frame[widx], (24 - idx * 4), 4);
diff[idx] = (diff[idx] ^ semask) - semask;
}
if (decodedebug)
ms_log (1, " W%02d: 11,10=7x4b %d %d %d %d %d %d %d\n",
widx, diff[0], diff[1], diff[2], diff[3], diff[4], diff[5], diff[6]);
break;
case 3: /* nibble=11, dnib=11: Error, undefined value */
ms_log (2, "%s: Impossible Steim2 dnib=11 for nibble=11\n", srcname);
return -1;
break;
}
break;
} /* Done with decoding 32-bit word based on nibble */
/* Apply differences to calculate output samples */
if (diffcount > 0)
{
for (idx = 0; idx < diffcount && samplecount > 0; idx++, outputptr++)
{
if (outputptr == output) /* Ignore first difference, instead store X0 */
*outputptr = X0;
else /* Otherwise store difference from previous sample */
*outputptr = *(outputptr - 1) + diff[idx];
samplecount--;
}
}
} /* Done looping over nibbles and 32-bit words */
} /* Done looping over frames */
/* Check data integrity by comparing last sample to Xn (reverse integration constant) */
if (outputptr != output && *(outputptr - 1) != Xn)
{
ms_log (1, "%s: Warning: Data integrity check for Steim2 failed, Last sample=%d, Xn=%d\n",
srcname, *(outputptr - 1), Xn);
}
return (outputptr - output);
} /* End of msr_decode_steim2() */
/***************************************************************************
* msr_pack_header_raw:
*
* Pack data header/blockettes into the specified SEED data record.
*
* Returns the header length in bytes on success or -1 on error.
***************************************************************************/
static int
msr_pack_header_raw ( MSRecord *msr, char *rawrec, int maxheaderlen,
flag swapflag, flag normalize,
struct blkt_1001_s **blkt1001, flag verbose )
{
struct blkt_link_s *cur_blkt;
struct fsdh_s *fsdh;
int16_t offset;
int blktcnt = 0;
int nextoffset;
if ( ! msr || ! rawrec )
return -1;
/* Make sure a fixed section of data header is available */
if ( ! msr->fsdh )
{
msr->fsdh = (struct fsdh_s *) calloc (1, sizeof (struct fsdh_s));
if ( msr->fsdh == NULL )
{
ms_log (2, "msr_pack_header_raw(%s): Cannot allocate memory\n",
PACK_SRCNAME);
return -1;
}
}
/* Update the SEED structures associated with the MSRecord */
if ( normalize )
if ( msr_normalize_header (msr, verbose) < 0 )
{
ms_log (2, "msr_pack_header_raw(%s): error normalizing header values\n",
PACK_SRCNAME);
return -1;
}
if ( verbose > 2 )
ms_log (1, "%s: Packing fixed section of data header\n", PACK_SRCNAME);
if ( maxheaderlen > msr->reclen )
{
ms_log (2, "msr_pack_header_raw(%s): maxheaderlen of %d is beyond record length of %d\n",
PACK_SRCNAME, maxheaderlen, msr->reclen);
return -1;
}
if ( maxheaderlen < sizeof(struct fsdh_s) )
{
ms_log (2, "msr_pack_header_raw(%s): maxheaderlen of %d is too small, must be >= %d\n",
PACK_SRCNAME, maxheaderlen, sizeof(struct fsdh_s));
return -1;
}
fsdh = (struct fsdh_s *) rawrec;
offset = 48;
/* Roll-over sequence number if necessary */
if ( msr->sequence_number > 999999 )
msr->sequence_number = 1;
/* Copy FSDH associated with the MSRecord into the record */
memcpy (fsdh, msr->fsdh, sizeof(struct fsdh_s));
/* Swap byte order? */
if ( swapflag )
{
MS_SWAPBTIME (&fsdh->start_time);
ms_gswap2 (&fsdh->numsamples);
ms_gswap2 (&fsdh->samprate_fact);
ms_gswap2 (&fsdh->samprate_mult);
ms_gswap4 (&fsdh->time_correct);
ms_gswap2 (&fsdh->data_offset);
ms_gswap2 (&fsdh->blockette_offset);
}
/* Traverse blockette chain and pack blockettes at 'offset' */
cur_blkt = msr->blkts;
while ( cur_blkt && offset < maxheaderlen )
{
/* Check that the blockette fits */
if ( (offset + 4 + cur_blkt->blktdatalen) > maxheaderlen )
{
ms_log (2, "msr_pack_header_raw(%s): header exceeds maxheaderlen of %d\n",
PACK_SRCNAME, maxheaderlen);
break;
}
/* Pack blockette type and leave space for next offset */
memcpy (rawrec + offset, &cur_blkt->blkt_type, 2);
if ( swapflag ) ms_gswap2 (rawrec + offset);
nextoffset = offset + 2;
offset += 4;
if ( cur_blkt->blkt_type == 100 )
{
struct blkt_100_s *blkt_100 = (struct blkt_100_s *) (rawrec + offset);
memcpy (blkt_100, cur_blkt->blktdata, sizeof (struct blkt_100_s));
offset += sizeof (struct blkt_100_s);
if ( swapflag )
{
ms_gswap4 (&blkt_100->samprate);
}
}
else if ( cur_blkt->blkt_type == 200 )
{
struct blkt_200_s *blkt_200 = (struct blkt_200_s *) (rawrec + offset);
memcpy (blkt_200, cur_blkt->blktdata, sizeof (struct blkt_200_s));
offset += sizeof (struct blkt_200_s);
if ( swapflag )
{
ms_gswap4 (&blkt_200->amplitude);
ms_gswap4 (&blkt_200->period);
ms_gswap4 (&blkt_200->background_estimate);
MS_SWAPBTIME (&blkt_200->time);
}
}
else if ( cur_blkt->blkt_type == 201 )
{
struct blkt_201_s *blkt_201 = (struct blkt_201_s *) (rawrec + offset);
memcpy (blkt_201, cur_blkt->blktdata, sizeof (struct blkt_201_s));
offset += sizeof (struct blkt_201_s);
if ( swapflag )
{
ms_gswap4 (&blkt_201->amplitude);
ms_gswap4 (&blkt_201->period);
ms_gswap4 (&blkt_201->background_estimate);
MS_SWAPBTIME (&blkt_201->time);
}
}
else if ( cur_blkt->blkt_type == 300 )
{
struct blkt_300_s *blkt_300 = (struct blkt_300_s *) (rawrec + offset);
memcpy (blkt_300, cur_blkt->blktdata, sizeof (struct blkt_300_s));
offset += sizeof (struct blkt_300_s);
if ( swapflag )
{
MS_SWAPBTIME (&blkt_300->time);
ms_gswap4 (&blkt_300->step_duration);
ms_gswap4 (&blkt_300->interval_duration);
ms_gswap4 (&blkt_300->amplitude);
ms_gswap4 (&blkt_300->reference_amplitude);
}
}
else if ( cur_blkt->blkt_type == 310 )
{
struct blkt_310_s *blkt_310 = (struct blkt_310_s *) (rawrec + offset);
memcpy (blkt_310, cur_blkt->blktdata, sizeof (struct blkt_310_s));
offset += sizeof (struct blkt_310_s);
if ( swapflag )
{
MS_SWAPBTIME (&blkt_310->time);
ms_gswap4 (&blkt_310->duration);
ms_gswap4 (&blkt_310->period);
ms_gswap4 (&blkt_310->amplitude);
ms_gswap4 (&blkt_310->reference_amplitude);
}
}
else if ( cur_blkt->blkt_type == 320 )
{
struct blkt_320_s *blkt_320 = (struct blkt_320_s *) (rawrec + offset);
memcpy (blkt_320, cur_blkt->blktdata, sizeof (struct blkt_320_s));
offset += sizeof (struct blkt_320_s);
if ( swapflag )
{
MS_SWAPBTIME (&blkt_320->time);
ms_gswap4 (&blkt_320->duration);
ms_gswap4 (&blkt_320->ptp_amplitude);
ms_gswap4 (&blkt_320->reference_amplitude);
}
}
else if ( cur_blkt->blkt_type == 390 )
{
struct blkt_390_s *blkt_390 = (struct blkt_390_s *) (rawrec + offset);
memcpy (blkt_390, cur_blkt->blktdata, sizeof (struct blkt_390_s));
offset += sizeof (struct blkt_390_s);
if ( swapflag )
{
MS_SWAPBTIME (&blkt_390->time);
ms_gswap4 (&blkt_390->duration);
ms_gswap4 (&blkt_390->amplitude);
}
}
else if ( cur_blkt->blkt_type == 395 )
{
struct blkt_395_s *blkt_395 = (struct blkt_395_s *) (rawrec + offset);
memcpy (blkt_395, cur_blkt->blktdata, sizeof (struct blkt_395_s));
offset += sizeof (struct blkt_395_s);
if ( swapflag )
{
MS_SWAPBTIME (&blkt_395->time);
}
}
else if ( cur_blkt->blkt_type == 400 )
{
struct blkt_400_s *blkt_400 = (struct blkt_400_s *) (rawrec + offset);
memcpy (blkt_400, cur_blkt->blktdata, sizeof (struct blkt_400_s));
offset += sizeof (struct blkt_400_s);
if ( swapflag )
{
ms_gswap4 (&blkt_400->azimuth);
ms_gswap4 (&blkt_400->slowness);
ms_gswap2 (&blkt_400->configuration);
}
}
else if ( cur_blkt->blkt_type == 405 )
{
struct blkt_405_s *blkt_405 = (struct blkt_405_s *) (rawrec + offset);
memcpy (blkt_405, cur_blkt->blktdata, sizeof (struct blkt_405_s));
offset += sizeof (struct blkt_405_s);
if ( swapflag )
{
ms_gswap2 (&blkt_405->delay_values);
}
if ( verbose > 0 )
{
ms_log (1, "msr_pack_header_raw(%s): WARNING Blockette 405 cannot be fully supported\n",
PACK_SRCNAME);
}
}
else if ( cur_blkt->blkt_type == 500 )
{
struct blkt_500_s *blkt_500 = (struct blkt_500_s *) (rawrec + offset);
memcpy (blkt_500, cur_blkt->blktdata, sizeof (struct blkt_500_s));
offset += sizeof (struct blkt_500_s);
if ( swapflag )
{
ms_gswap4 (&blkt_500->vco_correction);
MS_SWAPBTIME (&blkt_500->time);
ms_gswap4 (&blkt_500->exception_count);
}
}
else if ( cur_blkt->blkt_type == 1000 )
{
struct blkt_1000_s *blkt_1000 = (struct blkt_1000_s *) (rawrec + offset);
memcpy (blkt_1000, cur_blkt->blktdata, sizeof (struct blkt_1000_s));
offset += sizeof (struct blkt_1000_s);
/* This guarantees that the byte order is in sync with msr_pack() */
if ( packdatabyteorder >= 0 )
blkt_1000->byteorder = packdatabyteorder;
}
else if ( cur_blkt->blkt_type == 1001 )
{
struct blkt_1001_s *blkt_1001 = (struct blkt_1001_s *) (rawrec + offset);
memcpy (blkt_1001, cur_blkt->blktdata, sizeof (struct blkt_1001_s));
offset += sizeof (struct blkt_1001_s);
/* Track location of Blockette 1001 if requested */
if ( blkt1001 )
*blkt1001 = blkt_1001;
}
else if ( cur_blkt->blkt_type == 2000 )
{
struct blkt_2000_s *blkt_2000 = (struct blkt_2000_s *) (rawrec + offset);
memcpy (blkt_2000, cur_blkt->blktdata, cur_blkt->blktdatalen);
offset += cur_blkt->blktdatalen;
if ( swapflag )
{
ms_gswap2 (&blkt_2000->length);
ms_gswap2 (&blkt_2000->data_offset);
ms_gswap4 (&blkt_2000->recnum);
}
/* Nothing done to pack the opaque headers and data, they should already
be packed into the blockette payload */
}
else
{
memcpy (rawrec + offset, cur_blkt->blktdata, cur_blkt->blktdatalen);
offset += cur_blkt->blktdatalen;
}
/* Pack the offset to the next blockette */
if ( cur_blkt->next )
{
memcpy (rawrec + nextoffset, &offset, 2);
if ( swapflag ) ms_gswap2 (rawrec + nextoffset);
}
else
{
memset (rawrec + nextoffset, 0, 2);
}
blktcnt++;
cur_blkt = cur_blkt->next;
}
fsdh->numblockettes = blktcnt;
if ( verbose > 2 )
ms_log (1, "%s: Packed %d blockettes\n", PACK_SRCNAME, blktcnt);
return offset;
} /* End of msr_pack_header_raw() */
/************************************************************************
* msr_pack_data:
*
* Pack Mini-SEED data samples. The input data samples specified as
* 'src' will be packed with 'encoding' format and placed in 'dest'.
*
* If a pointer to a 32-bit integer sample is provided in the
* argument 'lastintsample' and 'comphistory' is true the sample
* value will be used to seed the difference buffer for Steim1/2
* encoding and provide a compression history. It will also be
* updated with the last sample packed in order to be used with a
* subsequent call to this routine.
*
* The number of samples packed will be placed in 'packsamples' and
* the number of bytes packed will be placed in 'packbytes'.
*
* Return 0 on success and a negative number on error.
************************************************************************/
static int
msr_pack_data (void *dest, void *src, int maxsamples, int maxdatabytes,
int *packsamples, int32_t *lastintsample, flag comphistory,
char sampletype, flag encoding, flag swapflag, flag verbose)
{
int retval;
int nframes;
int npacked;
int32_t *intbuff;
int32_t d0;
/* Decide if this is a format that we can decode */
switch (encoding)
{
case DE_ASCII:
if ( sampletype != 'a' )
{
ms_log (2, "%s: Sample type must be ascii (a) for ASCII encoding not '%c'\n",
PACK_SRCNAME, sampletype);
return -1;
}
if ( verbose > 1 )
ms_log (1, "%s: Packing ASCII data\n", PACK_SRCNAME);
retval = msr_pack_text (dest, src, maxsamples, maxdatabytes, 1,
&npacked, packsamples);
break;
case DE_INT16:
if ( sampletype != 'i' )
{
ms_log (2, "%s: Sample type must be integer (i) for integer-16 encoding not '%c'\n",
PACK_SRCNAME, sampletype);
return -1;
}
if ( verbose > 1 )
ms_log (1, "%s: Packing INT-16 data samples\n", PACK_SRCNAME);
retval = msr_pack_int_16 (dest, src, maxsamples, maxdatabytes, 1,
&npacked, packsamples, swapflag);
break;
case DE_INT32:
if ( sampletype != 'i' )
{
ms_log (2, "%s: Sample type must be integer (i) for integer-32 encoding not '%c'\n",
PACK_SRCNAME, sampletype);
return -1;
}
if ( verbose > 1 )
ms_log (1, "%s: Packing INT-32 data samples\n", PACK_SRCNAME);
retval = msr_pack_int_32 (dest, src, maxsamples, maxdatabytes, 1,
&npacked, packsamples, swapflag);
break;
case DE_FLOAT32:
if ( sampletype != 'f' )
{
ms_log (2, "%s: Sample type must be float (f) for float-32 encoding not '%c'\n",
PACK_SRCNAME, sampletype);
return -1;
}
if ( verbose > 1 )
ms_log (1, "%s: Packing FLOAT-32 data samples\n", PACK_SRCNAME);
retval = msr_pack_float_32 (dest, src, maxsamples, maxdatabytes, 1,
&npacked, packsamples, swapflag);
break;
case DE_FLOAT64:
if ( sampletype != 'd' )
{
ms_log (2, "%s: Sample type must be double (d) for float-64 encoding not '%c'\n",
PACK_SRCNAME, sampletype);
return -1;
}
if ( verbose > 1 )
ms_log (1, "%s: Packing FLOAT-64 data samples\n", PACK_SRCNAME);
retval = msr_pack_float_64 (dest, src, maxsamples, maxdatabytes, 1,
&npacked, packsamples, swapflag);
break;
case DE_STEIM1:
if ( sampletype != 'i' )
{
ms_log (2, "%s: Sample type must be integer (i) for Steim-1 compression not '%c'\n",
PACK_SRCNAME, sampletype);
return -1;
}
intbuff = (int32_t *) src;
/* If a previous sample is supplied use it for compression history otherwise cold-start */
d0 = ( lastintsample && comphistory ) ? (intbuff[0] - *lastintsample) : 0;
if ( verbose > 1 )
ms_log (1, "%s: Packing Steim-1 data frames\n", PACK_SRCNAME);
nframes = maxdatabytes / 64;
retval = msr_pack_steim1 (dest, src, d0, maxsamples, nframes, 1,
&npacked, packsamples, swapflag);
/* If a previous sample is supplied update it with the last sample value */
if ( lastintsample && retval == 0 )
*lastintsample = intbuff[*packsamples-1];
break;
case DE_STEIM2:
if ( sampletype != 'i' )
{
ms_log (2, "%s: Sample type must be integer (i) for Steim-2 compression not '%c'\n",
PACK_SRCNAME, sampletype);
return -1;
}
intbuff = (int32_t *) src;
/* If a previous sample is supplied use it for compression history otherwise cold-start */
d0 = ( lastintsample && comphistory ) ? (intbuff[0] - *lastintsample) : 0;
if ( verbose > 1 )
ms_log (1, "%s: Packing Steim-2 data frames\n", PACK_SRCNAME);
nframes = maxdatabytes / 64;
retval = msr_pack_steim2 (dest, src, d0, maxsamples, nframes, 1,
&npacked, packsamples, swapflag);
/* If a previous sample is supplied update it with the last sample value */
if ( lastintsample && retval == 0 )
*lastintsample = intbuff[*packsamples-1];
break;
default:
ms_log (2, "%s: Unable to pack format %d\n", PACK_SRCNAME, encoding);
return -1;
}
return retval;
} /* End of msr_pack_data() */
int
main (int argc, char **argv)
{
struct filelink *flp;
MSRecord *msr = 0;
MSTraceList *mstl = 0;
FILE *bfp = 0;
FILE *ofp = 0;
int retcode = MS_NOERROR;
char envvariable[100];
int dataflag = 0;
long long int totalrecs = 0;
long long int totalsamps = 0;
long long int totalfiles = 0;
off_t filepos = 0;
char srcname[50];
char stime[30];
/* Set default error message prefix */
ms_loginit (NULL, NULL, NULL, "ERROR: ");
/* Process given parameters (command line and parameter file) */
if ( processparam (argc, argv) < 0 )
return 1;
/* Setup encoding environment variable if specified, ugly kludge */
if ( encodingstr )
{
snprintf (envvariable, sizeof(envvariable), "UNPACK_DATA_FORMAT=%s", encodingstr);
if ( putenv (envvariable) )
{
ms_log (2, "Cannot set environment variable UNPACK_DATA_FORMAT\n");
return 1;
}
}
/* Open the integer output file if specified */
if ( binfile )
{
if ( strcmp (binfile, "-") == 0 )
{
bfp = stdout;
}
else if ( (bfp = fopen (binfile, "wb")) == NULL )
{
ms_log (2, "Cannot open binary data output file: %s (%s)\n",
binfile, strerror(errno));
return 1;
}
}
/* Open the output file if specified */
if ( outfile )
{
if ( strcmp (outfile, "-") == 0 )
{
ofp = stdout;
}
else if ( (ofp = fopen (outfile, "wb")) == NULL )
{
ms_log (2, "Cannot open output file: %s (%s)\n",
outfile, strerror(errno));
return 1;
}
}
if ( printdata || binfile )
dataflag = 1;
if ( tracegapsum || tracegaponly )
mstl = mstl_init (NULL);
flp = filelist;
while ( flp != 0 )
{
if ( verbose >= 2 )
{
if ( flp->offset )
ms_log (1, "Processing: %s (starting at byte %lld)\n", flp->filename, flp->offset);
else
ms_log (1, "Processing: %s\n", flp->filename);
}
/* Set starting byte offset if supplied as negative file position */
filepos = - flp->offset;
/* Loop over the input file */
while ( reccntdown != 0 )
{
if ( (retcode = ms_readmsr (&msr, flp->filename, reclen, &filepos,
NULL, skipnotdata, 0, verbose)) != MS_NOERROR )
break;
/* Check if record matches start/end time criteria */
if ( starttime != HPTERROR || endtime != HPTERROR )
{
hptime_t recendtime = msr_endtime (msr);
if ( starttime != HPTERROR && (msr->starttime < starttime && ! (msr->starttime <= starttime && recendtime >= starttime)) )
{
if ( verbose >= 3 )
{
msr_srcname (msr, srcname, 1);
ms_hptime2seedtimestr (msr->starttime, stime, 1);
ms_log (1, "Skipping (starttime) %s, %s\n", srcname, stime);
}
continue;
}
if ( endtime != HPTERROR && (recendtime > endtime && ! (msr->starttime <= endtime && recendtime >= endtime)) )
{
if ( verbose >= 3 )
{
msr_srcname (msr, srcname, 1);
ms_hptime2seedtimestr (msr->starttime, stime, 1);
ms_log (1, "Skipping (starttime) %s, %s\n", srcname, stime);
}
continue;
}
}
if ( match || reject )
{
/* Generate the srcname with the quality code */
msr_srcname (msr, srcname, 1);
/* Check if record is matched by the match regex */
if ( match )
{
if ( regexec ( match, srcname, 0, 0, 0) != 0 )
{
if ( verbose >= 3 )
{
ms_hptime2seedtimestr (msr->starttime, stime, 1);
ms_log (1, "Skipping (match) %s, %s\n", srcname, stime);
}
continue;
}
}
/* Check if record is rejected by the reject regex */
if ( reject )
{
if ( regexec ( reject, srcname, 0, 0, 0) == 0 )
{
if ( verbose >= 3 )
{
ms_hptime2seedtimestr (msr->starttime, stime, 1);
ms_log (1, "Skipping (reject) %s, %s\n", srcname, stime);
}
continue;
}
}
}
if ( reccntdown > 0 )
reccntdown--;
totalrecs++;
totalsamps += msr->samplecnt;
if ( ! tracegaponly )
{
if ( printoffset )
ms_log (0, "%-10lld", (long long) filepos);
if ( printlatency )
ms_log (0, "%-10.6g secs ", msr_host_latency(msr));
if ( printraw )
ms_parse_raw (msr->record, msr->reclen, ppackets, -1);
else
msr_print (msr, ppackets);
}
if ( tracegapsum || tracegaponly )
mstl_addmsr (mstl, msr, dataquality, 1, timetol, sampratetol);
if ( dataflag )
{
/* Parse the record (again) and unpack the data */
int rv = msr_unpack (msr->record, msr->reclen, &msr, 1, verbose);
if ( rv == MS_NOERROR && printdata && ! tracegaponly )
{
int line, col, cnt, samplesize;
int lines = (msr->numsamples / 6) + 1;
void *sptr;
if ( (samplesize = ms_samplesize(msr->sampletype)) == 0 )
{
ms_log (2, "Unrecognized sample type: %c\n", msr->sampletype);
}
if ( msr->sampletype == 'a' )
{
char *ascii = (char *)msr->datasamples;
int length = msr->numsamples;
ms_log (0, "ASCII Data:\n");
/* Print maximum log message segments */
while ( length > (MAX_LOG_MSG_LENGTH-1) )
{
ms_log (0, "%.*s", (MAX_LOG_MSG_LENGTH-1), ascii);
ascii += MAX_LOG_MSG_LENGTH-1;
length -= MAX_LOG_MSG_LENGTH-1;
}
/* Print any remaining ASCII and add a newline */
if ( length > 0 )
{
ms_log (0, "%.*s\n", length, ascii);
}
else
{
ms_log (0, "\n");
}
}
else
for ( cnt = 0, line = 0; line < lines; line++ )
{
for ( col = 0; col < 6 ; col ++ )
{
if ( cnt < msr->numsamples )
{
sptr = (char*)msr->datasamples + (cnt * samplesize);
if ( msr->sampletype == 'i' )
ms_log (0, "%10d ", *(int32_t *)sptr);
else if ( msr->sampletype == 'f' )
ms_log (0, "%10.8g ", *(float *)sptr);
else if ( msr->sampletype == 'd' )
ms_log (0, "%10.10g ", *(double *)sptr);
cnt++;
}
}
ms_log (0, "\n");
/* If only printing the first 6 samples break out here */
if ( printdata == 1 )
break;
}
}
if ( binfile )
{
uint8_t samplesize = ms_samplesize (msr->sampletype);
if ( samplesize )
{
fwrite (msr->datasamples, samplesize, msr->numsamples, bfp);
}
else
{
ms_log (1, "Cannot write to binary file, unknown sample type: %c\n",
msr->sampletype);
}
}
}
if ( outfile )
{
fwrite (msr->record, 1, msr->reclen, ofp);
}
}
/* Print error if not EOF and not counting down records */
if ( retcode != MS_ENDOFFILE && reccntdown != 0 )
{
ms_log (2, "Cannot read %s: %s\n", flp->filename, ms_errorstr(retcode));
ms_readmsr (&msr, NULL, 0, NULL, NULL, 0, 0, 0);
exit (1);
}
/* Make sure everything is cleaned up */
ms_readmsr (&msr, NULL, 0, NULL, NULL, 0, 0, 0);
totalfiles++;
flp = flp->next;
} /* End of looping over file list */
if ( binfile )
fclose (bfp);
if ( outfile )
fclose (ofp);
if ( basicsum )
ms_log (0, "Files: %lld, Records: %lld, Samples: %lld\n", totalfiles, totalrecs, totalsamps);
if ( tracegapsum || tracegaponly )
{
if ( tracegapsum == 1 || tracegaponly == 1 )
{
mstl_printtracelist (mstl, timeformat, 1, tracegaps);
}
if ( tracegapsum == 2 || tracegaponly == 2 )
{
mstl_printgaplist (mstl, timeformat, mingapptr, maxgapptr);
}
if ( tracegaponly == 3 )
{
mstl_printsynclist (mstl, NULL, 1);
}
}
if ( mstl )
mstl_free (&mstl, 0);
return 0;
} /* End of main() */
/************************************************************************
* msr_pack_data:
*
* Pack Mini-SEED data samples. The input data samples specified as
* 'src' will be packed with 'encoding' format and placed in 'dest'.
*
* If a pointer to a 32-bit integer sample is provided in the
* argument 'lastintsample' and 'comphistory' is true the sample
* value will be used to seed the difference buffer for Steim1/2
* encoding and provide a compression history. It will also be
* updated with the last sample packed in order to be used with a
* subsequent call to this routine.
*
* Return number of samples packed on success and a negative on error.
************************************************************************/
static int
msr_pack_data (void *dest, void *src, int maxsamples, int maxdatabytes,
int32_t *lastintsample, flag comphistory, char sampletype,
flag encoding, flag swapflag, char *srcname, flag verbose)
{
int nsamples;
int32_t *intbuff;
int32_t d0;
/* Check for encode debugging environment variable */
if (getenv ("ENCODE_DEBUG"))
encodedebug = 1;
/* Decide if this is a format that we can encode */
switch (encoding)
{
case DE_ASCII:
if (sampletype != 'a')
{
ms_log (2, "%s: Sample type must be ascii (a) for ASCII text encoding not '%c'\n",
srcname, sampletype);
return -1;
}
if (verbose > 1)
ms_log (1, "%s: Packing ASCII data\n", srcname);
nsamples = msr_encode_text (src, maxsamples, dest, maxdatabytes);
break;
case DE_INT16:
if (sampletype != 'i')
{
ms_log (2, "%s: Sample type must be integer (i) for INT16 encoding not '%c'\n",
srcname, sampletype);
return -1;
}
if (verbose > 1)
ms_log (1, "%s: Packing INT16 data samples\n", srcname);
nsamples = msr_encode_int16 (src, maxsamples, dest, maxdatabytes, swapflag);
break;
case DE_INT32:
if (sampletype != 'i')
{
ms_log (2, "%s: Sample type must be integer (i) for INT32 encoding not '%c'\n",
srcname, sampletype);
return -1;
}
if (verbose > 1)
ms_log (1, "%s: Packing INT32 data samples\n", srcname);
nsamples = msr_encode_int32 (src, maxsamples, dest, maxdatabytes, swapflag);
break;
case DE_FLOAT32:
if (sampletype != 'f')
{
ms_log (2, "%s: Sample type must be float (f) for FLOAT32 encoding not '%c'\n",
srcname, sampletype);
return -1;
}
if (verbose > 1)
ms_log (1, "%s: Packing FLOAT32 data samples\n", srcname);
nsamples = msr_encode_float32 (src, maxsamples, dest, maxdatabytes, swapflag);
break;
case DE_FLOAT64:
if (sampletype != 'd')
{
ms_log (2, "%s: Sample type must be double (d) for FLOAT64 encoding not '%c'\n",
srcname, sampletype);
return -1;
}
if (verbose > 1)
ms_log (1, "%s: Packing FLOAT64 data samples\n", srcname);
nsamples = msr_encode_float64 (src, maxsamples, dest, maxdatabytes, swapflag);
break;
case DE_STEIM1:
if (sampletype != 'i')
{
ms_log (2, "%s: Sample type must be integer (i) for Steim1 compression not '%c'\n",
srcname, sampletype);
return -1;
}
intbuff = (int32_t *)src;
/* If a previous sample is supplied use it for compression history otherwise cold-start */
d0 = (lastintsample && comphistory) ? (intbuff[0] - *lastintsample) : 0;
if (verbose > 1)
ms_log (1, "%s: Packing Steim1 data frames\n", srcname);
nsamples = msr_encode_steim1 (src, maxsamples, dest, maxdatabytes, d0, swapflag);
/* If a previous sample is supplied update it with the last sample value */
if (lastintsample && nsamples > 0)
*lastintsample = intbuff[nsamples - 1];
break;
case DE_STEIM2:
if (sampletype != 'i')
{
ms_log (2, "%s: Sample type must be integer (i) for Steim2 compression not '%c'\n",
srcname, sampletype);
return -1;
}
intbuff = (int32_t *)src;
/* If a previous sample is supplied use it for compression history otherwise cold-start */
d0 = (lastintsample && comphistory) ? (intbuff[0] - *lastintsample) : 0;
if (verbose > 1)
ms_log (1, "%s: Packing Steim2 data frames\n", srcname);
nsamples = msr_encode_steim2 (src, maxsamples, dest, maxdatabytes, d0, srcname, swapflag);
/* If a previous sample is supplied update it with the last sample value */
if (lastintsample && nsamples > 0)
*lastintsample = intbuff[nsamples - 1];
break;
default:
ms_log (2, "%s: Unable to pack format %d\n", srcname, encoding);
return -1;
}
return nsamples;
} /* End of msr_pack_data() */
/***************************************************************************
* parameter_proc():
* Process the command line parameters.
*
* Returns 0 on success, and -1 on failure
***************************************************************************/
static int
parameter_proc (int argcount, char **argvec)
{
int optind;
/* Process all command line arguments */
for (optind = 1; optind < argcount; optind++)
{
if (strcmp (argvec[optind], "-V") == 0)
{
ms_log (1, "%s version: %s\n", PACKAGE, VERSION);
exit (0);
}
else if (strcmp (argvec[optind], "-h") == 0)
{
usage ();
exit (0);
}
else if (strncmp (argvec[optind], "-v", 2) == 0)
{
verbose += strspn (&argvec[optind][1], "v");
}
else if (strncmp (argvec[optind], "-p", 2) == 0)
{
ppackets += strspn (&argvec[optind][1], "p");
}
else if (strncmp (argvec[optind], "-d", 2) == 0)
{
printdata = 1;
}
else if (strncmp (argvec[optind], "-D", 2) == 0)
{
printdata = 2;
}
else if (strcmp (argvec[optind], "-s") == 0)
{
basicsum = 1;
}
else if (strcmp (argvec[optind], "-r") == 0)
{
reclen = atoi (argvec[++optind]);
}
else if (strncmp (argvec[optind], "-", 1) == 0 &&
strlen (argvec[optind]) > 1)
{
ms_log (2, "Unknown option: %s\n", argvec[optind]);
exit (1);
}
else if (inputfile == 0)
{
inputfile = argvec[optind];
}
else
{
ms_log (2, "Unknown option: %s\n", argvec[optind]);
exit (1);
}
}
/* Make sure an inputfile was specified */
if (!inputfile)
{
ms_log (2, "No input file was specified\n\n");
ms_log (1, "%s version %s\n\n", PACKAGE, VERSION);
ms_log (1, "Try %s -h for usage\n", PACKAGE);
exit (1);
}
/* Report the program version */
if (verbose)
ms_log (1, "%s version: %s\n", PACKAGE, VERSION);
return 0;
} /* End of parameter_proc() */
/***************************************************************************
* parameter_proc():
* Process the command line parameters.
*
* Returns 0 on success, and -1 on failure
***************************************************************************/
static int
processparam (int argcount, char **argvec)
{
int optind;
char *matchpattern = 0;
char *rejectpattern = 0;
char *tptr;
/* Process all command line arguments */
for (optind = 1; optind < argcount; optind++)
{
if (strcmp (argvec[optind], "-V") == 0)
{
ms_log (1, "%s version: %s\n", PACKAGE, VERSION);
exit (0);
}
else if (strcmp (argvec[optind], "-h") == 0)
{
usage();
exit (0);
}
else if (strncmp (argvec[optind], "-v", 2) == 0)
{
verbose += strspn (&argvec[optind][1], "v");
}
else if (strcmp (argvec[optind], "-r") == 0)
{
reclen = strtol (getoptval(argcount, argvec, optind++), NULL, 10);
}
else if (strcmp (argvec[optind], "-e") == 0)
{
encodingstr = getoptval(argcount, argvec, optind++);
}
else if (strcmp (argvec[optind], "-ts") == 0)
{
starttime = ms_seedtimestr2hptime (getoptval(argcount, argvec, optind++));
if ( starttime == HPTERROR )
return -1;
}
else if (strcmp (argvec[optind], "-te") == 0)
{
endtime = ms_seedtimestr2hptime (getoptval(argcount, argvec, optind++));
if ( endtime == HPTERROR )
return -1;
}
else if (strcmp (argvec[optind], "-M") == 0)
{
matchpattern = strdup (getoptval(argcount, argvec, optind++));
}
else if (strcmp (argvec[optind], "-R") == 0)
{
rejectpattern = strdup (getoptval(argcount, argvec, optind++));
}
else if (strcmp (argvec[optind], "-n") == 0)
{
reccntdown = strtol (getoptval(argcount, argvec, optind++), NULL, 10);
}
else if (strcmp (argvec[optind], "-y") == 0)
{
skipnotdata = 0;
}
else if (strncmp (argvec[optind], "-p", 2) == 0)
{
ppackets += strspn (&argvec[optind][1], "p");
}
else if (strcmp (argvec[optind], "-O") == 0)
{
printoffset = 1;
}
else if (strcmp (argvec[optind], "-L") == 0)
{
printlatency = 1;
}
else if (strcmp (argvec[optind], "-s") == 0)
{
basicsum = 1;
}
else if (strcmp (argvec[optind], "-d") == 0)
{
printdata = 1;
}
else if (strcmp (argvec[optind], "-D") == 0)
{
printdata = 2;
}
else if (strcmp (argvec[optind], "-z") == 0)
{
printraw = 1;
}
else if (strcmp (argvec[optind], "-t") == 0)
{
tracegapsum = 1;
}
else if (strcmp (argvec[optind], "-T") == 0)
{
tracegaponly = 1;
}
else if (strcmp (argvec[optind], "-tg") == 0)
{
tracegaps = 1;
/* -T is assumed if -t/-g is not already set */
if ( ! tracegapsum )
tracegaponly = 1;
}
else if (strcmp (argvec[optind], "-tt") == 0)
{
timetol = strtod (getoptval(argcount, argvec, optind++), NULL);
}
else if (strcmp (argvec[optind], "-rt") == 0)
{
sampratetol = strtod (getoptval(argcount, argvec, optind++), NULL);
}
else if (strcmp (argvec[optind], "-g") == 0)
{
tracegapsum = 2;
}
else if (strcmp (argvec[optind], "-G") == 0)
{
tracegaponly = 2;
}
else if (strcmp (argvec[optind], "-S") == 0)
{
tracegaponly = 3;
}
else if (strcmp (argvec[optind], "-gmin") == 0)
{
mingap = strtod (getoptval(argcount, argvec, optind++), NULL);
mingapptr = &mingap;
}
else if (strcmp (argvec[optind], "-gmax") == 0)
{
maxgap = strtod (getoptval(argcount, argvec, optind++), NULL);
maxgapptr = &maxgap;
}
else if (strcmp (argvec[optind], "-Q") == 0)
{
dataquality = 1;
}
else if (strcmp (argvec[optind], "-tf") == 0)
{
timeformat = strtol (getoptval(argcount, argvec, optind++), NULL, 10);
}
else if (strcmp (argvec[optind], "-b") == 0)
{
binfile = getoptval(argcount, argvec, optind++);
}
else if (strcmp (argvec[optind], "-o") == 0)
{
outfile = getoptval(argcount, argvec, optind++);
}
else if (strncmp (argvec[optind], "-", 1) == 0 &&
strlen (argvec[optind]) > 1 )
{
ms_log (2, "Unknown option: %s\n", argvec[optind]);
exit (1);
}
else
{
tptr = argvec[optind];
/* Check for an input file list */
if ( tptr[0] == '@' )
{
if ( addlistfile (tptr+1) < 0 )
{
ms_log (2, "Error adding list file %s", tptr+1);
exit (1);
}
}
/* Otherwise this is an input file */
else
{
/* Add file to global file list */
if ( addfile (tptr) )
{
ms_log (2, "Error adding file to input list %s", tptr);
exit (1);
}
}
}
}
/* Make sure input file were specified */
if ( filelist == 0 )
{
ms_log (2, "No input files were specified\n\n");
ms_log (1, "%s version %s\n\n", PACKAGE, VERSION);
ms_log (1, "Try %s -h for usage\n", PACKAGE);
exit (1);
}
/* Expand match pattern from a file if prefixed by '@' */
if ( matchpattern )
{
if ( *matchpattern == '@' )
{
tptr = strdup(matchpattern + 1); /* Skip the @ sign */
free (matchpattern);
matchpattern = 0;
if ( readregexfile (tptr, &matchpattern) <= 0 )
{
ms_log (2, "Cannot read match pattern regex file\n");
exit (1);
}
free (tptr);
}
}
/* Expand reject pattern from a file if prefixed by '@' */
if ( rejectpattern )
{
if ( *rejectpattern == '@' )
{
tptr = strdup(rejectpattern + 1); /* Skip the @ sign */
free (rejectpattern);
rejectpattern = 0;
if ( readregexfile (tptr, &rejectpattern) <= 0 )
{
ms_log (2, "Cannot read reject pattern regex file\n");
exit (1);
}
free (tptr);
}
}
/* Compile match and reject patterns */
if ( matchpattern )
{
match = (regex_t *) malloc (sizeof(regex_t));
if ( regcomp (match, matchpattern, REG_EXTENDED) != 0)
{
ms_log (2, "Cannot compile match regex: '%s'\n", matchpattern);
}
free (matchpattern);
}
if ( rejectpattern )
{
reject = (regex_t *) malloc (sizeof(regex_t));
if ( regcomp (reject, rejectpattern, REG_EXTENDED) != 0)
{
ms_log (2, "Cannot compile reject regex: '%s'\n", rejectpattern);
}
free (rejectpattern);
}
/* Report the program version */
if ( verbose )
ms_log (1, "%s version: %s\n", PACKAGE, VERSION);
return 0;
} /* End of parameter_proc() */
/***************************************************************************
* msr_duplicate:
*
* Duplicate an MSRecord struct
* including the fixed-section data
* header and blockette chain. If
* the datadup flag is true and the
* source MSRecord has associated
* data samples copy them as well.
*
* Returns a pointer to a new MSRecord on success and NULL on error.
***************************************************************************/
MSRecord *
msr_duplicate (MSRecord *msr, flag datadup)
{
MSRecord *dupmsr = 0;
int samplesize = 0;
if ( ! msr )
return NULL;
/* Allocate target MSRecord structure */
if ( (dupmsr = msr_init (NULL)) == NULL )
return NULL;
/* Copy MSRecord structure */
memcpy (dupmsr, msr, sizeof(MSRecord));
/* Copy fixed-section data header structure */
if ( msr->fsdh )
{
/* Allocate memory for new FSDH structure */
if ( (dupmsr->fsdh = (struct fsdh_s *) malloc (sizeof(struct fsdh_s))) == NULL )
{
ms_log (2, "msr_duplicate(): Error allocating memory\n");
free (dupmsr);
return NULL;
}
/* Copy the contents */
memcpy (dupmsr->fsdh, msr->fsdh, sizeof(struct fsdh_s));
}
/* Copy the blockette chain */
if ( msr->blkts )
{
BlktLink *blkt = msr->blkts;
BlktLink *next = NULL;
dupmsr->blkts = 0;
while ( blkt )
{
next = blkt->next;
/* Add blockette to chain of new MSRecord */
if ( msr_addblockette (dupmsr, blkt->blktdata, blkt->blktdatalen,
blkt->blkt_type, 0) == NULL )
{
ms_log (2, "msr_duplicate(): Error adding blockettes\n");
msr_free (&dupmsr);
return NULL;
}
blkt = next;
}
}
/* Copy data samples if requested and available */
if ( datadup && msr->datasamples )
{
/* Determine size of samples in bytes */
samplesize = ms_samplesize (msr->sampletype);
if ( samplesize == 0 )
{
ms_log (2, "msr_duplicate(): unrecognized sample type: '%c'\n",
msr->sampletype);
free (dupmsr);
return NULL;
}
/* Allocate memory for new data array */
if ( (dupmsr->datasamples = (void *) malloc ((size_t)(msr->numsamples * samplesize))) == NULL )
{
ms_log (2, "msr_duplicate(): Error allocating memory\n");
free (dupmsr);
return NULL;
}
/* Copy the data array */
memcpy (dupmsr->datasamples, msr->datasamples, ((size_t)(msr->numsamples * samplesize)));
}
/* Otherwise make sure the sample array and count are zero */
else
{
dupmsr->datasamples = 0;
dupmsr->numsamples = 0;
}
return dupmsr;
} /* End of msr_duplicate() */
/***************************************************************************
* msr_print:
*
* Prints header values in an MSRecord struct, if 'details' is greater
* than 0 then detailed information about each blockette is printed.
* If 'details' is greater than 1 very detailed information is
* printed. If no FSDH (msr->fsdh) is present only a single line with
* basic information is printed.
***************************************************************************/
void
msr_print (MSRecord *msr, flag details)
{
double nomsamprate;
char srcname[50];
char time[25];
char b;
int idx;
if ( ! msr )
return;
/* Generate a source name string */
srcname[0] = '\0';
msr_srcname (msr, srcname, 0);
/* Generate a start time string */
ms_hptime2seedtimestr (msr->starttime, time, 1);
/* Report information in the fixed header */
if ( details > 0 && msr->fsdh )
{
nomsamprate = msr_nomsamprate (msr);
ms_log (0, "%s, %06d, %c\n", srcname, msr->sequence_number, msr->dataquality);
ms_log (0, " start time: %s\n", time);
ms_log (0, " number of samples: %d\n", msr->fsdh->numsamples);
ms_log (0, " sample rate factor: %d (%.10g samples per second)\n",
msr->fsdh->samprate_fact, nomsamprate);
ms_log (0, " sample rate multiplier: %d\n", msr->fsdh->samprate_mult);
if ( details > 1 )
{
/* Activity flags */
b = msr->fsdh->act_flags;
ms_log (0, " activity flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] Calibration signals present\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] Time correction applied\n");
if ( b & 0x04 ) ms_log (0, " [Bit 2] Beginning of an event, station trigger\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] End of an event, station detrigger\n");
if ( b & 0x10 ) ms_log (0, " [Bit 4] A positive leap second happened in this record\n");
if ( b & 0x20 ) ms_log (0, " [Bit 5] A negative leap second happened in this record\n");
if ( b & 0x40 ) ms_log (0, " [Bit 6] Event in progress\n");
if ( b & 0x80 ) ms_log (0, " [Bit 7] Undefined bit set\n");
/* I/O and clock flags */
b = msr->fsdh->io_flags;
ms_log (0, " I/O and clock flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] Station volume parity error possibly present\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] Long record read (possibly no problem)\n");
if ( b & 0x04 ) ms_log (0, " [Bit 2] Short record read (record padded)\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Start of time series\n");
if ( b & 0x10 ) ms_log (0, " [Bit 4] End of time series\n");
if ( b & 0x20 ) ms_log (0, " [Bit 5] Clock locked\n");
if ( b & 0x40 ) ms_log (0, " [Bit 6] Undefined bit set\n");
if ( b & 0x80 ) ms_log (0, " [Bit 7] Undefined bit set\n");
/* Data quality flags */
b = msr->fsdh->dq_flags;
ms_log (0, " data quality flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] Amplifier saturation detected\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] Digitizer clipping detected\n");
if ( b & 0x04 ) ms_log (0, " [Bit 2] Spikes detected\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Glitches detected\n");
if ( b & 0x10 ) ms_log (0, " [Bit 4] Missing/padded data present\n");
if ( b & 0x20 ) ms_log (0, " [Bit 5] Telemetry synchronization error\n");
if ( b & 0x40 ) ms_log (0, " [Bit 6] A digital filter may be charging\n");
if ( b & 0x80 ) ms_log (0, " [Bit 7] Time tag is questionable\n");
}
ms_log (0, " number of blockettes: %d\n", msr->fsdh->numblockettes);
ms_log (0, " time correction: %ld\n", (long int) msr->fsdh->time_correct);
ms_log (0, " data offset: %d\n", msr->fsdh->data_offset);
ms_log (0, " first blockette offset: %d\n", msr->fsdh->blockette_offset);
}
else
{
ms_log (0, "%s, %06d, %c, %d, %"PRId64" samples, %-.10g Hz, %s\n",
srcname, msr->sequence_number, msr->dataquality,
msr->reclen, msr->samplecnt, msr->samprate, time);
}
/* Report information in the blockette chain */
if ( details > 0 && msr->blkts )
{
BlktLink *cur_blkt = msr->blkts;
while ( cur_blkt )
{
if ( cur_blkt->blkt_type == 100 )
{
struct blkt_100_s *blkt_100 = (struct blkt_100_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_log (0, " actual sample rate: %.10g\n", blkt_100->samprate);
if ( details > 1 )
{
b = blkt_100->flags;
ms_log (0, " undefined flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
ms_log (0, " reserved bytes (3): %u,%u,%u\n",
blkt_100->reserved[0], blkt_100->reserved[1], blkt_100->reserved[2]);
}
}
else if ( cur_blkt->blkt_type == 200 )
{
struct blkt_200_s *blkt_200 = (struct blkt_200_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_log (0, " signal amplitude: %g\n", blkt_200->amplitude);
ms_log (0, " signal period: %g\n", blkt_200->period);
ms_log (0, " background estimate: %g\n", blkt_200->background_estimate);
if ( details > 1 )
{
b = blkt_200->flags;
ms_log (0, " event detection flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] 1: Dilatation wave\n");
else ms_log (0, " [Bit 0] 0: Compression wave\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] 1: Units after deconvolution\n");
else ms_log (0, " [Bit 1] 0: Units are digital counts\n");
if ( b & 0x04 ) ms_log (0, " [Bit 2] Bit 0 is undetermined\n");
ms_log (0, " reserved byte: %u\n", blkt_200->reserved);
}
ms_btime2seedtimestr (&blkt_200->time, time);
ms_log (0, " signal onset time: %s\n", time);
ms_log (0, " detector name: %.24s\n", blkt_200->detector);
}
else if ( cur_blkt->blkt_type == 201 )
{
struct blkt_201_s *blkt_201 = (struct blkt_201_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_log (0, " signal amplitude: %g\n", blkt_201->amplitude);
ms_log (0, " signal period: %g\n", blkt_201->period);
ms_log (0, " background estimate: %g\n", blkt_201->background_estimate);
b = blkt_201->flags;
ms_log (0, " event detection flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] 1: Dilation wave\n");
else ms_log (0, " [Bit 0] 0: Compression wave\n");
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_201->reserved);
ms_btime2seedtimestr (&blkt_201->time, time);
ms_log (0, " signal onset time: %s\n", time);
ms_log (0, " SNR values: ");
for (idx=0; idx < 6; idx++) ms_log (0, "%u ", blkt_201->snr_values[idx]);
ms_log (0, "\n");
ms_log (0, " loopback value: %u\n", blkt_201->loopback);
ms_log (0, " pick algorithm: %u\n", blkt_201->pick_algorithm);
ms_log (0, " detector name: %.24s\n", blkt_201->detector);
}
else if ( cur_blkt->blkt_type == 300 )
{
struct blkt_300_s *blkt_300 = (struct blkt_300_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_btime2seedtimestr (&blkt_300->time, time);
ms_log (0, " calibration start time: %s\n", time);
ms_log (0, " number of calibrations: %u\n", blkt_300->numcalibrations);
b = blkt_300->flags;
ms_log (0, " calibration flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x01 ) ms_log (0, " [Bit 0] First pulse is positive\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] Calibration's alternate sign\n");
if ( b & 0x04 ) ms_log (0, " [Bit 2] Calibration was automatic\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Calibration continued from previous record(s)\n");
ms_log (0, " step duration: %u\n", blkt_300->step_duration);
ms_log (0, " interval duration: %u\n", blkt_300->interval_duration);
ms_log (0, " signal amplitude: %g\n", blkt_300->amplitude);
ms_log (0, " input signal channel: %.3s", blkt_300->input_channel);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_300->reserved);
ms_log (0, " reference amplitude: %u\n", blkt_300->reference_amplitude);
ms_log (0, " coupling: %.12s\n", blkt_300->coupling);
ms_log (0, " rolloff: %.12s\n", blkt_300->rolloff);
}
else if ( cur_blkt->blkt_type == 310 )
{
struct blkt_310_s *blkt_310 = (struct blkt_310_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_btime2seedtimestr (&blkt_310->time, time);
ms_log (0, " calibration start time: %s\n", time);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_310->reserved1);
b = blkt_310->flags;
ms_log (0, " calibration flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x04 ) ms_log (0, " [Bit 2] Calibration was automatic\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Calibration continued from previous record(s)\n");
if ( b & 0x10 ) ms_log (0, " [Bit 4] Peak-to-peak amplitude\n");
if ( b & 0x20 ) ms_log (0, " [Bit 5] Zero-to-peak amplitude\n");
if ( b & 0x40 ) ms_log (0, " [Bit 6] RMS amplitude\n");
ms_log (0, " calibration duration: %u\n", blkt_310->duration);
ms_log (0, " signal period: %g\n", blkt_310->period);
ms_log (0, " signal amplitude: %g\n", blkt_310->amplitude);
ms_log (0, " input signal channel: %.3s", blkt_310->input_channel);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_310->reserved2);
ms_log (0, " reference amplitude: %u\n", blkt_310->reference_amplitude);
ms_log (0, " coupling: %.12s\n", blkt_310->coupling);
ms_log (0, " rolloff: %.12s\n", blkt_310->rolloff);
}
else if ( cur_blkt->blkt_type == 320 )
{
struct blkt_320_s *blkt_320 = (struct blkt_320_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_btime2seedtimestr (&blkt_320->time, time);
ms_log (0, " calibration start time: %s\n", time);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_320->reserved1);
b = blkt_320->flags;
ms_log (0, " calibration flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x04 ) ms_log (0, " [Bit 2] Calibration was automatic\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Calibration continued from previous record(s)\n");
if ( b & 0x10 ) ms_log (0, " [Bit 4] Random amplitudes\n");
ms_log (0, " calibration duration: %u\n", blkt_320->duration);
ms_log (0, " peak-to-peak amplitude: %g\n", blkt_320->ptp_amplitude);
ms_log (0, " input signal channel: %.3s", blkt_320->input_channel);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_320->reserved2);
ms_log (0, " reference amplitude: %u\n", blkt_320->reference_amplitude);
ms_log (0, " coupling: %.12s\n", blkt_320->coupling);
ms_log (0, " rolloff: %.12s\n", blkt_320->rolloff);
ms_log (0, " noise type: %.8s\n", blkt_320->noise_type);
}
else if ( cur_blkt->blkt_type == 390 )
{
struct blkt_390_s *blkt_390 = (struct blkt_390_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_btime2seedtimestr (&blkt_390->time, time);
ms_log (0, " calibration start time: %s\n", time);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_390->reserved1);
b = blkt_390->flags;
ms_log (0, " calibration flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( b & 0x04 ) ms_log (0, " [Bit 2] Calibration was automatic\n");
if ( b & 0x08 ) ms_log (0, " [Bit 3] Calibration continued from previous record(s)\n");
ms_log (0, " calibration duration: %u\n", blkt_390->duration);
ms_log (0, " signal amplitude: %g\n", blkt_390->amplitude);
ms_log (0, " input signal channel: %.3s", blkt_390->input_channel);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_390->reserved2);
}
else if ( cur_blkt->blkt_type == 395 )
{
struct blkt_395_s *blkt_395 = (struct blkt_395_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_btime2seedtimestr (&blkt_395->time, time);
ms_log (0, " calibration end time: %s\n", time);
if ( details > 1 )
ms_log (0, " reserved bytes (2): %u,%u\n",
blkt_395->reserved[0], blkt_395->reserved[1]);
}
else if ( cur_blkt->blkt_type == 400 )
{
struct blkt_400_s *blkt_400 = (struct blkt_400_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_log (0, " beam azimuth (degrees): %g\n", blkt_400->azimuth);
ms_log (0, " beam slowness (sec/degree): %g\n", blkt_400->slowness);
ms_log (0, " configuration: %u\n", blkt_400->configuration);
if ( details > 1 )
ms_log (0, " reserved bytes (2): %u,%u\n",
blkt_400->reserved[0], blkt_400->reserved[1]);
}
else if ( cur_blkt->blkt_type == 405 )
{
struct blkt_405_s *blkt_405 = (struct blkt_405_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s, incomplete)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_log (0, " first delay value: %u\n", blkt_405->delay_values[0]);
}
else if ( cur_blkt->blkt_type == 500 )
{
struct blkt_500_s *blkt_500 = (struct blkt_500_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_log (0, " VCO correction: %g%%\n", blkt_500->vco_correction);
ms_btime2seedtimestr (&blkt_500->time, time);
ms_log (0, " time of exception: %s\n", time);
ms_log (0, " usec: %d\n", blkt_500->usec);
ms_log (0, " reception quality: %u%%\n", blkt_500->reception_qual);
ms_log (0, " exception count: %u\n", blkt_500->exception_count);
ms_log (0, " exception type: %.16s\n", blkt_500->exception_type);
ms_log (0, " clock model: %.32s\n", blkt_500->clock_model);
ms_log (0, " clock status: %.128s\n", blkt_500->clock_status);
}
else if ( cur_blkt->blkt_type == 1000 )
{
struct blkt_1000_s *blkt_1000 = (struct blkt_1000_s *) cur_blkt->blktdata;
int recsize;
char order[40];
/* Calculate record size in bytes as 2^(blkt_1000->rec_len) */
recsize = (unsigned int) 1 << blkt_1000->reclen;
/* Big or little endian? */
if (blkt_1000->byteorder == 0)
strncpy (order, "Little endian", sizeof(order)-1);
else if (blkt_1000->byteorder == 1)
strncpy (order, "Big endian", sizeof(order)-1);
else
strncpy (order, "Unknown value", sizeof(order)-1);
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_log (0, " encoding: %s (val:%u)\n",
(char *) ms_encodingstr (blkt_1000->encoding), blkt_1000->encoding);
ms_log (0, " byte order: %s (val:%u)\n",
order, blkt_1000->byteorder);
ms_log (0, " record length: %d (val:%u)\n",
recsize, blkt_1000->reclen);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_1000->reserved);
}
else if ( cur_blkt->blkt_type == 1001 )
{
struct blkt_1001_s *blkt_1001 = (struct blkt_1001_s *) cur_blkt->blktdata;
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_log (0, " timing quality: %u%%\n", blkt_1001->timing_qual);
ms_log (0, " micro second: %d\n", blkt_1001->usec);
if ( details > 1 )
ms_log (0, " reserved byte: %u\n", blkt_1001->reserved);
ms_log (0, " frame count: %u\n", blkt_1001->framecnt);
}
else if ( cur_blkt->blkt_type == 2000 )
{
struct blkt_2000_s *blkt_2000 = (struct blkt_2000_s *) cur_blkt->blktdata;
char order[40];
/* Big or little endian? */
if (blkt_2000->byteorder == 0)
strncpy (order, "Little endian", sizeof(order)-1);
else if (blkt_2000->byteorder == 1)
strncpy (order, "Big endian", sizeof(order)-1);
else
strncpy (order, "Unknown value", sizeof(order)-1);
ms_log (0, " BLOCKETTE %u: (%s)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
ms_log (0, " blockette length: %u\n", blkt_2000->length);
ms_log (0, " data offset: %u\n", blkt_2000->data_offset);
ms_log (0, " record number: %u\n", blkt_2000->recnum);
ms_log (0, " byte order: %s (val:%u)\n",
order, blkt_2000->byteorder);
b = blkt_2000->flags;
ms_log (0, " data flags: [%u%u%u%u%u%u%u%u] 8 bits\n",
bit(b,0x01), bit(b,0x02), bit(b,0x04), bit(b,0x08),
bit(b,0x10), bit(b,0x20), bit(b,0x40), bit(b,0x80));
if ( details > 1 )
{
if ( b & 0x01 ) ms_log (0, " [Bit 0] 1: Stream oriented\n");
else ms_log (0, " [Bit 0] 0: Record oriented\n");
if ( b & 0x02 ) ms_log (0, " [Bit 1] 1: Blockette 2000s may NOT be packaged\n");
else ms_log (0, " [Bit 1] 0: Blockette 2000s may be packaged\n");
if ( ! (b & 0x04) && ! (b & 0x08) )
ms_log (0, " [Bits 2-3] 00: Complete blockette\n");
else if ( ! (b & 0x04) && (b & 0x08) )
ms_log (0, " [Bits 2-3] 01: First blockette in span\n");
else if ( (b & 0x04) && (b & 0x08) )
ms_log (0, " [Bits 2-3] 11: Continuation blockette in span\n");
else if ( (b & 0x04) && ! (b & 0x08) )
ms_log (0, " [Bits 2-3] 10: Final blockette in span\n");
if ( ! (b & 0x10) && ! (b & 0x20) )
ms_log (0, " [Bits 4-5] 00: Not file oriented\n");
else if ( ! (b & 0x10) && (b & 0x20) )
ms_log (0, " [Bits 4-5] 01: First blockette of file\n");
else if ( (b & 0x10) && ! (b & 0x20) )
ms_log (0, " [Bits 4-5] 10: Continuation of file\n");
else if ( (b & 0x10) && (b & 0x20) )
ms_log (0, " [Bits 4-5] 11: Last blockette of file\n");
}
ms_log (0, " number of headers: %u\n", blkt_2000->numheaders);
/* Crude display of the opaque data headers */
if ( details > 1 )
ms_log (0, " headers: %.*s\n",
(blkt_2000->data_offset - 15), blkt_2000->payload);
}
else
{
ms_log (0, " BLOCKETTE %u: (%s, not parsed)\n", cur_blkt->blkt_type,
ms_blktdesc(cur_blkt->blkt_type));
ms_log (0, " next blockette: %u\n", cur_blkt->next_blkt);
}
cur_blkt = cur_blkt->next;
}
}
} /* End of msr_print() */
/***************************************************************************
* msr_normalize_header:
*
* Normalize header values between the MSRecord struct and the
* associated fixed-section of the header and blockettes. Essentially
* this updates the SEED structured data in the MSRecord.fsdh struct
* and MSRecord.blkts chain with values stored at the MSRecord level.
*
* Returns the header length in bytes on success or -1 on error.
***************************************************************************/
int
msr_normalize_header ( MSRecord *msr, flag verbose )
{
struct blkt_link_s *cur_blkt;
char seqnum[7];
int offset = 0;
int blktcnt = 0;
int reclenexp = 0;
int reclenfind;
if ( ! msr )
return -1;
/* Update values in fixed section of data header */
if ( msr->fsdh )
{
if ( verbose > 2 )
ms_log (1, "Normalizing fixed section of data header\n");
/* Roll-over sequence number if necessary */
if ( msr->sequence_number > 999999 )
msr->sequence_number = 1;
/* Update values in the MSRecord.fsdh struct */
snprintf (seqnum, 7, "%06d", msr->sequence_number);
memcpy (msr->fsdh->sequence_number, seqnum, 6);
msr->fsdh->dataquality = msr->dataquality;
msr->fsdh->reserved = ' ';
ms_strncpopen (msr->fsdh->network, msr->network, 2);
ms_strncpopen (msr->fsdh->station, msr->station, 5);
ms_strncpopen (msr->fsdh->location, msr->location, 2);
ms_strncpopen (msr->fsdh->channel, msr->channel, 3);
ms_hptime2btime (msr->starttime, &(msr->fsdh->start_time));
/* When the sampling rate is <= 32767 Hertz determine the factor
* and multipler through rational approximation. For higher rates
* set the factor and multiplier to 0. */
if ( msr->samprate <= 32767.0 )
{
ms_genfactmult (msr->samprate, &(msr->fsdh->samprate_fact), &(msr->fsdh->samprate_mult));
}
else
{
if ( verbose > 1 )
ms_log (1, "Sampling rate too high to approximate factor & multiplier: %g\n",
msr->samprate);
msr->fsdh->samprate_fact = 0;
msr->fsdh->samprate_mult = 0;
}
offset += 48;
if ( msr->blkts )
msr->fsdh->blockette_offset = offset;
else
msr->fsdh->blockette_offset = 0;
}
/* Traverse blockette chain and performs necessary updates*/
cur_blkt = msr->blkts;
if ( cur_blkt && verbose > 2 )
ms_log (1, "Normalizing blockette chain\n");
while ( cur_blkt )
{
offset += 4;
if ( cur_blkt->blkt_type == 100 && msr->Blkt100 )
{
msr->Blkt100->samprate = (float)msr->samprate;
offset += sizeof (struct blkt_100_s);
}
else if ( cur_blkt->blkt_type == 1000 && msr->Blkt1000 )
{
msr->Blkt1000->byteorder = msr->byteorder;
msr->Blkt1000->encoding = msr->encoding;
/* Calculate the record length as an exponent of 2 */
for (reclenfind=1, reclenexp=1; reclenfind <= MAXRECLEN; reclenexp++)
{
reclenfind *= 2;
if ( reclenfind == msr->reclen ) break;
}
if ( reclenfind != msr->reclen )
{
ms_log (2, "msr_normalize_header(): Record length %d is not a power of 2\n",
msr->reclen);
return -1;
}
msr->Blkt1000->reclen = reclenexp;
offset += sizeof (struct blkt_1000_s);
}
else if ( cur_blkt->blkt_type == 1001 )
{
hptime_t sec, usec;
/* Insert microseconds offset */
sec = msr->starttime / (HPTMODULUS / 10000);
usec = msr->starttime - (sec * (HPTMODULUS / 10000));
usec /= (HPTMODULUS / 1000000);
msr->Blkt1001->usec = (int8_t) usec;
offset += sizeof (struct blkt_1001_s);
}
blktcnt++;
cur_blkt = cur_blkt->next;
}
if ( msr->fsdh )
msr->fsdh->numblockettes = blktcnt;
return offset;
} /* End of msr_normalize_header() */
/***************************************************************************
* msr_addblockette:
*
* Add a blockette to the blockette chain of an MSRecord. 'blktdata'
* should be the body of the blockette type 'blkttype' of 'length'
* bytes without the blockette header (type and next offsets). The
* 'chainpos' value controls which end of the chain the blockette is
* added to. If 'chainpos' is 0 the blockette will be added to the
* end of the chain (last blockette), other wise it will be added to
* the beginning of the chain (first blockette).
*
* Returns a pointer to the BlktLink added to the chain on success and
* NULL on error.
***************************************************************************/
BlktLink *
msr_addblockette (MSRecord *msr, char *blktdata, int length, int blkttype,
int chainpos)
{
BlktLink *blkt;
if ( ! msr )
return NULL;
blkt = msr->blkts;
if ( blkt )
{
if ( chainpos != 0 )
{
blkt = (BlktLink *) malloc (sizeof(BlktLink));
blkt->next = msr->blkts;
msr->blkts = blkt;
}
else
{
/* Find the last blockette */
while ( blkt && blkt->next )
{
blkt = blkt->next;
}
blkt->next = (BlktLink *) malloc (sizeof(BlktLink));
blkt = blkt->next;
blkt->next = 0;
}
if ( blkt == NULL )
{
ms_log (2, "msr_addblockette(): Cannot allocate memory\n");
return NULL;
}
}
else
{
msr->blkts = (BlktLink *) malloc (sizeof(BlktLink));
if ( msr->blkts == NULL )
{
ms_log (2, "msr_addblockette(): Cannot allocate memory\n");
return NULL;
}
blkt = msr->blkts;
blkt->next = 0;
}
blkt->blktoffset = 0;
blkt->blkt_type = blkttype;
blkt->next_blkt = 0;
blkt->blktdata = (char *) malloc (length);
if ( blkt->blktdata == NULL )
{
ms_log (2, "msr_addblockette(): Cannot allocate memory\n");
return NULL;
}
memcpy (blkt->blktdata, blktdata, length);
blkt->blktdatalen = length;
/* Setup the shortcut pointer for common blockettes */
switch ( blkttype )
{
case 100:
msr->Blkt100 = blkt->blktdata;
break;
case 1000:
msr->Blkt1000 = blkt->blktdata;
break;
case 1001:
msr->Blkt1001 = blkt->blktdata;
break;
}
return blkt;
} /* End of msr_addblockette() */
/**********************************************************************
* msr_parse:
*
* This routine will attempt to parse (detect and unpack) a Mini-SEED
* record from a specified memory buffer and populate a supplied
* MSRecord structure.
*
* If reclen is less than or equal to 0 the length of record is
* automatically detected otherwise reclen should be the correct
* record length.
*
* For auto detection of record length the record should include a
* 1000 blockette or be followed by another record header in the
* buffer.
*
* dataflag will be passed directly to msr_unpack().
*
* Return values:
* 0 : Success, populates the supplied MSRecord.
* >0 : Data record detected but not enough data is present, the
* return value is a hint of how many more bytes are needed.
* <0 : libmseed error code (listed in libmseed.h) is returned.
*********************************************************************/
int
msr_parse ( char *record, int recbuflen, MSRecord **ppmsr, int reclen,
flag dataflag, flag verbose )
{
int detlen = 0;
int retcode = 0;
if ( ! ppmsr )
return MS_GENERROR;
if ( ! record )
return MS_GENERROR;
/* Sanity check: record length cannot be larger than buffer */
if ( reclen > 0 && reclen > recbuflen )
{
ms_log (2, "ms_parse() Record length (%d) cannot be larger than buffer (%d)\n",
reclen, recbuflen);
return MS_GENERROR;
}
/* Autodetect the record length */
if ( reclen <= 0 )
{
detlen = ms_detect (record, recbuflen);
/* No data record detected */
if ( detlen < 0 )
{
return MS_NOTSEED;
}
/* Found record but could not determine length */
if ( detlen == 0 )
{
return 256;
}
if ( verbose > 2 )
{
ms_log (1, "Detected record length of %d bytes\n", detlen);
}
reclen = detlen;
}
/* Check that record length is in supported range */
if ( reclen < MINRECLEN || reclen > MAXRECLEN )
{
ms_log (2, "Record length is out of range: %d (allowed: %d to %d)\n",
reclen, MINRECLEN, MAXRECLEN);
return MS_OUTOFRANGE;
}
/* Check if more data is required, return hint */
if ( reclen > recbuflen )
{
if ( verbose > 2 )
ms_log (1, "Detected %d byte record, need %d more bytes\n",
reclen, (reclen - recbuflen));
return (reclen - recbuflen);
}
/* Unpack record */
if ( (retcode = msr_unpack (record, reclen, ppmsr, dataflag, verbose)) != MS_NOERROR )
{
msr_free (ppmsr);
return retcode;
}
return MS_NOERROR;
} /* End of msr_parse() */
/************************************************************************
* msr_decode_geoscope:
*
* Decode GEOSCOPE gain ranged data (demultiplexed only) encoded
* miniSEED data and place in supplied buffer as 32-bit floats.
*
* Return number of samples in output buffer on success, -1 on error.
************************************************************************/
int
msr_decode_geoscope (char *input, int samplecount, float *output,
int outputlength, int encoding,
char *srcname, int swapflag)
{
int idx = 0;
int mantissa; /* mantissa from SEED data */
int gainrange; /* gain range factor */
int exponent; /* total exponent */
int k;
uint64_t exp2val;
int16_t sint;
double dsample = 0.0;
union {
uint8_t b[4];
uint32_t i;
} sample32;
if (!input || !output)
return -1;
if (samplecount <= 0 || outputlength <= 0)
return -1;
/* Make sure we recognize this as a GEOSCOPE encoding format */
if (encoding != DE_GEOSCOPE24 &&
encoding != DE_GEOSCOPE163 &&
encoding != DE_GEOSCOPE164)
{
ms_log (2, "msr_decode_geoscope(%s): unrecognized GEOSCOPE encoding: %d\n",
srcname, encoding);
return -1;
}
for (idx = 0; idx < samplecount && outputlength >= (int)sizeof (float); idx++)
{
switch (encoding)
{
case DE_GEOSCOPE24:
sample32.i = 0;
if (swapflag)
for (k = 0; k < 3; k++)
sample32.b[2 - k] = input[k];
else
for (k = 0; k < 3; k++)
sample32.b[1 + k] = input[k];
mantissa = sample32.i;
/* Take 2's complement for mantissa for overflow */
if (mantissa > MAX24)
mantissa -= 2 * (MAX24 + 1);
/* Store */
dsample = (double)mantissa;
break;
case DE_GEOSCOPE163:
memcpy (&sint, input, sizeof (int16_t));
if (swapflag)
ms_gswap2a (&sint);
/* Recover mantissa and gain range factor */
mantissa = (sint & GEOSCOPE_MANTISSA_MASK);
gainrange = (sint & GEOSCOPE_GAIN3_MASK) >> GEOSCOPE_SHIFT;
/* Exponent is just gainrange for GEOSCOPE */
exponent = gainrange;
/* Calculate sample as mantissa / 2^exponent */
exp2val = (uint64_t)1 << exponent;
dsample = ((double)(mantissa - 2048)) / exp2val;
break;
case DE_GEOSCOPE164:
memcpy (&sint, input, sizeof (int16_t));
if (swapflag)
ms_gswap2a (&sint);
/* Recover mantissa and gain range factor */
mantissa = (sint & GEOSCOPE_MANTISSA_MASK);
gainrange = (sint & GEOSCOPE_GAIN4_MASK) >> GEOSCOPE_SHIFT;
/* Exponent is just gainrange for GEOSCOPE */
exponent = gainrange;
/* Calculate sample as mantissa / 2^exponent */
exp2val = (uint64_t)1 << exponent;
dsample = ((double)(mantissa - 2048)) / exp2val;
break;
}
/* Save sample in output array */
output[idx] = (float)dsample;
outputlength -= sizeof (float);
/* Increment edata pointer depending on size */
switch (encoding)
{
case DE_GEOSCOPE24:
input += 3;
break;
case DE_GEOSCOPE163:
case DE_GEOSCOPE164:
input += 2;
break;
}
}
return idx;
} /* End of msr_decode_geoscope() */
int
main (int argc, char **argv)
{
MSRecord *msr = 0;
int64_t totalrecs = 0;
int64_t totalsamps = 0;
int retcode;
#ifndef WIN32
/* Signal handling, use POSIX calls with standardized semantics */
struct sigaction sa;
sa.sa_flags = SA_RESTART;
sigemptyset (&sa.sa_mask);
sa.sa_handler = term_handler;
sigaction (SIGINT, &sa, NULL);
sigaction (SIGQUIT, &sa, NULL);
sigaction (SIGTERM, &sa, NULL);
sa.sa_handler = SIG_IGN;
sigaction (SIGHUP, &sa, NULL);
sigaction (SIGPIPE, &sa, NULL);
#endif
/* Process given parameters (command line and parameter file) */
if (parameter_proc (argc, argv) < 0)
return -1;
/* Loop over the input file */
while ((retcode = ms_readmsr (&msr, inputfile, reclen, NULL, NULL, 1,
printdata, verbose)) == MS_NOERROR)
{
totalrecs++;
totalsamps += msr->samplecnt;
msr_print (msr, ppackets);
if (printdata && msr->numsamples > 0)
{
int line, col, cnt, samplesize;
int lines = (msr->numsamples / 6) + 1;
void *sptr;
if ((samplesize = ms_samplesize (msr->sampletype)) == 0)
{
ms_log (2, "Unrecognized sample type: '%c'\n", msr->sampletype);
}
for (cnt = 0, line = 0; line < lines; line++)
{
for (col = 0; col < 6; col++)
{
if (cnt < msr->numsamples)
{
sptr = (char *)msr->datasamples + (cnt * samplesize);
if (msr->sampletype == 'i')
ms_log (0, "%10d ", *(int32_t *)sptr);
else if (msr->sampletype == 'f')
ms_log (0, "%10.8g ", *(float *)sptr);
else if (msr->sampletype == 'd')
ms_log (0, "%10.10g ", *(double *)sptr);
cnt++;
}
}
ms_log (0, "\n");
/* If only printing the first 6 samples break out here */
if (printdata == 1)
break;
}
}
}
if (retcode != MS_ENDOFFILE)
ms_log (2, "Cannot read %s: %s\n", inputfile, ms_errorstr (retcode));
/* Make sure everything is cleaned up */
ms_readmsr (&msr, NULL, 0, NULL, NULL, 0, 0, 0);
if (basicsum)
ms_log (1, "Records: %" PRId64 ", Samples: %" PRId64 "\n",
totalrecs, totalsamps);
return 0;
} /* End of main() */
/**********************************************************************
* ms_readmsr_main:
*
* This routine will open and read, with subsequent calls, all
* Mini-SEED records in specified file.
*
* All static file reading parameters are stored in a MSFileParam
* struct and returned (via a pointer to a pointer) for the calling
* routine to use in subsequent calls. A MSFileParam struct will be
* allocated if necessary. This routine is thread safe and can be
* used to read multiple files in parallel as long as the file reading
* parameters are managed appropriately.
*
* If reclen is 0 or negative the length of every record is
* automatically detected. For auto detection of record length the
* record must include a 1000 blockette or be followed by a valid
* record header or end of file.
*
* If *fpos is not NULL it will be updated to reflect the file
* position (offset from the beginning in bytes) from where the
* returned record was read. As a special case, if *fpos is not NULL
* and the value it points to is less than 0 this will be interpreted
* as a (positive) starting offset from which to begin reading data;
* this feature does not work with packed files.
*
* If *last is not NULL it will be set to 1 when the last record in
* the file is being returned, otherwise it will be 0.
*
* If the skipnotdata flag is true any data chunks read that do not
* have valid data record indicators (D, R, Q, M, etc.) will be skipped.
*
* dataflag will be passed directly to msr_unpack().
*
* If a Selections list is supplied it will be used to determine when
* a section of data in a packed file may be skipped, packed files are
* internal to the IRIS DMC.
*
* After reading all the records in a file the controlling program
* should call it one last time with msfile set to NULL. This will
* close the file and free allocated memory.
*
* Returns MS_NOERROR and populates an MSRecord struct at *ppmsr on
* successful read, returns MS_ENDOFFILE on EOF, otherwise returns a
* libmseed error code (listed in libmseed.h) and *ppmsr is set to
* NULL.
*********************************************************************/
int
ms_readmsr_main (MSFileParam **ppmsfp, MSRecord **ppmsr, const char *msfile,
int reclen, off_t *fpos, int *last, flag skipnotdata,
flag dataflag, Selections *selections, flag verbose)
{
MSFileParam *msfp;
off_t packdatasize = 0;
int packskipsize;
int parseval = 0;
int readsize = 0;
int readcount = 0;
int retcode = MS_NOERROR;
if (!ppmsr)
return MS_GENERROR;
if (!ppmsfp)
return MS_GENERROR;
msfp = *ppmsfp;
/* Initialize the file read parameters if needed */
if (!msfp)
{
msfp = (MSFileParam *)malloc (sizeof (MSFileParam));
if (msfp == NULL)
{
ms_log (2, "ms_readmsr_main(): Cannot allocate memory for MSFP\n");
return MS_GENERROR;
}
/* Redirect the supplied pointer to the allocated params */
*ppmsfp = msfp;
msfp->fp = NULL;
msfp->filename[0] = '\0';
msfp->rawrec = NULL;
msfp->readlen = 0;
msfp->readoffset = 0;
msfp->packtype = 0;
msfp->packhdroffset = 0;
msfp->filepos = 0;
msfp->filesize = 0;
msfp->recordcount = 0;
}
/* When cleanup is requested */
if (msfile == NULL)
{
msr_free (ppmsr);
if (msfp->fp != NULL)
fclose (msfp->fp);
if (msfp->rawrec != NULL)
free (msfp->rawrec);
/* If the file parameters are the global parameters reset them */
if (*ppmsfp == &gMSFileParam)
{
gMSFileParam.fp = NULL;
gMSFileParam.filename[0] = '\0';
gMSFileParam.rawrec = NULL;
gMSFileParam.readlen = 0;
gMSFileParam.readoffset = 0;
gMSFileParam.packtype = 0;
gMSFileParam.packhdroffset = 0;
gMSFileParam.filepos = 0;
gMSFileParam.filesize = 0;
gMSFileParam.recordcount = 0;
}
/* Otherwise free the MSFileParam */
else
{
free (*ppmsfp);
*ppmsfp = NULL;
}
return MS_NOERROR;
}
/* Allocate reading buffer */
if (msfp->rawrec == NULL)
{
if (!(msfp->rawrec = (char *)malloc (MAXRECLEN)))
{
ms_log (2, "ms_readmsr_main(): Cannot allocate memory for read buffer\n");
return MS_GENERROR;
}
}
/* Sanity check: track if we are reading the same file */
if (msfp->fp && strncmp (msfile, msfp->filename, sizeof (msfp->filename)))
{
ms_log (2, "ms_readmsr_main() called with a different file name without being reset\n");
/* Close previous file and reset needed variables */
if (msfp->fp != NULL)
fclose (msfp->fp);
msfp->fp = NULL;
msfp->readlen = 0;
msfp->readoffset = 0;
msfp->packtype = 0;
msfp->packhdroffset = 0;
msfp->filepos = 0;
msfp->filesize = 0;
msfp->recordcount = 0;
}
/* Open the file if needed, redirect to stdin if file is "-" */
if (msfp->fp == NULL)
{
/* Store the filename for tracking */
strncpy (msfp->filename, msfile, sizeof (msfp->filename) - 1);
msfp->filename[sizeof (msfp->filename) - 1] = '\0';
if (strcmp (msfile, "-") == 0)
{
msfp->fp = stdin;
}
else
{
if ((msfp->fp = fopen (msfile, "rb")) == NULL)
{
ms_log (2, "Cannot open file: %s (%s)\n", msfile, strerror (errno));
msr_free (ppmsr);
return MS_GENERROR;
}
else
{
/* Determine file size */
struct stat sbuf;
if (fstat (fileno (msfp->fp), &sbuf))
{
ms_log (2, "Cannot open file: %s (%s)\n", msfile, strerror (errno));
msr_free (ppmsr);
return MS_GENERROR;
}
msfp->filesize = sbuf.st_size;
}
}
}
/* Seek to a specified offset if requested */
if (fpos != NULL && *fpos < 0)
{
/* Only try to seek in real files, not stdin */
if (msfp->fp != stdin)
{
if (lmp_fseeko (msfp->fp, *fpos * -1, SEEK_SET))
{
ms_log (2, "Cannot seek in file: %s (%s)\n", msfile, strerror (errno));
return MS_GENERROR;
}
msfp->filepos = *fpos * -1;
msfp->readlen = 0;
msfp->readoffset = 0;
}
}
/* Zero the last record indicator */
if (last)
*last = 0;
/* Read data and search for records */
for (;;)
{
/* Read more data into buffer if not at EOF and buffer has less than MINRECLEN
* or more data is needed for the current record detected in buffer. */
if (!feof (msfp->fp) && (MSFPBUFLEN (msfp) < MINRECLEN || parseval > 0))
{
/* Reset offsets if no unprocessed data in buffer */
if (MSFPBUFLEN (msfp) <= 0)
{
msfp->readlen = 0;
msfp->readoffset = 0;
}
/* Otherwise shift existing data to beginning of buffer */
else if (msfp->readoffset > 0)
{
ms_shift_msfp (msfp, msfp->readoffset);
}
/* Determine read size */
readsize = (MAXRECLEN - msfp->readlen);
/* Read data into record buffer */
readcount = ms_fread (msfp->rawrec + msfp->readlen, 1, readsize, msfp->fp);
if (readcount != readsize)
{
if (!feof (msfp->fp))
{
ms_log (2, "Short read of %d bytes starting from %" PRId64 "\n",
readsize, msfp->filepos);
retcode = MS_GENERROR;
break;
}
}
/* Update read buffer length */
msfp->readlen += readcount;
/* File position corresponding to start of buffer; not strictly necessary */
if (msfp->fp != stdin)
msfp->filepos = lmp_ftello (msfp->fp) - msfp->readlen;
}
/* Test for packed file signature at the beginning of the file */
if (msfp->filepos == 0 && *(MSFPREADPTR (msfp)) == 'P' && MSFPBUFLEN (msfp) >= 48)
{
msfp->packtype = 0;
/* Determine pack type, the negative pack type indicates initial header */
if (!memcmp ("PED", MSFPREADPTR (msfp), 3))
msfp->packtype = -1;
else if (!memcmp ("PSD", MSFPREADPTR (msfp), 3))
msfp->packtype = -2;
else if (!memcmp ("PLC", MSFPREADPTR (msfp), 3))
msfp->packtype = -6;
else if (!memcmp ("PQI", MSFPREADPTR (msfp), 3))
msfp->packtype = -7;
else if (!memcmp ("PLS", MSFPREADPTR (msfp), 3))
msfp->packtype = -8;
if (verbose > 0)
ms_log (1, "Detected packed file (%3.3s: type %d)\n", MSFPREADPTR (msfp), -msfp->packtype);
}
/* Read pack headers, initial and subsequent headers including (ignored) chksum values */
if (msfp->packtype && (msfp->packtype < 0 || msfp->filepos == msfp->packhdroffset) && MSFPBUFLEN (msfp) >= 48)
{
char hdrstr[30];
int64_t datasize;
/* Determine bytes to skip before header: either initial ID block or type-specific chksum block */
packskipsize = (msfp->packtype < 0) ? 10 : packtypes[msfp->packtype][2];
if (msfp->packtype < 0)
msfp->packtype = -msfp->packtype;
/* Read pack length from pack header accounting for bytes that should be skipped */
memset (hdrstr, 0, sizeof (hdrstr));
memcpy (hdrstr, MSFPREADPTR (msfp) + (packtypes[msfp->packtype][0] + packskipsize - packtypes[msfp->packtype][1]),
packtypes[msfp->packtype][1]);
sscanf (hdrstr, " %" SCNd64, &datasize);
packdatasize = (off_t)datasize;
/* Next pack header = File position + skipsize + header size + data size
* This offset is actually to the data block chksum which is skipped by the logic above,
* the next pack header should directly follow the chksum. */
msfp->packhdroffset = msfp->filepos + packskipsize + packtypes[msfp->packtype][0] + packdatasize;
if (verbose > 1)
ms_log (1, "Read packed file header at offset %" PRId64 " (%d bytes follow), chksum offset: %" PRId64 "\n",
(msfp->filepos + packskipsize), packdatasize,
msfp->packhdroffset);
/* Shift buffer to new reading offset (aligns records in buffer) */
ms_shift_msfp (msfp, msfp->readoffset + (packskipsize + packtypes[msfp->packtype][0]));
} /* End of packed header processing */
/* Check for match if selections are supplied and pack header was read, */
/* only when enough data is in buffer and not reading from stdin pipe */
if (selections && msfp->packtype && packdatasize && MSFPBUFLEN (msfp) >= 48 && msfp->fp != stdin)
{
char srcname[100];
ms_recsrcname (MSFPREADPTR (msfp), srcname, 1);
if (!ms_matchselect (selections, srcname, HPTERROR, HPTERROR, NULL))
{
/* Update read position if next section is in buffer */
if (MSFPBUFLEN (msfp) >= (msfp->packhdroffset - msfp->filepos))
{
if (verbose > 1)
{
ms_log (1, "Skipping (jump) packed section for %s (%d bytes) starting at offset %" PRId64 "\n",
srcname, (msfp->packhdroffset - msfp->filepos), msfp->filepos);
}
msfp->readoffset += (msfp->packhdroffset - msfp->filepos);
msfp->filepos = msfp->packhdroffset;
packdatasize = 0;
}
/* Otherwise seek to next pack header and reset reading position */
else
{
if (verbose > 1)
{
ms_log (1, "Skipping (seek) packed section for %s (%d bytes) starting at offset %" PRId64 "\n",
srcname, (msfp->packhdroffset - msfp->filepos), msfp->filepos);
}
if (lmp_fseeko (msfp->fp, msfp->packhdroffset, SEEK_SET))
{
ms_log (2, "Cannot seek in file: %s (%s)\n", msfile, strerror (errno));
return MS_GENERROR;
break;
}
msfp->filepos = msfp->packhdroffset;
msfp->readlen = 0;
msfp->readoffset = 0;
packdatasize = 0;
}
/* Return to top of loop for proper pack header handling */
continue;
}
} /* End of selection processing */
/* Attempt to parse record from buffer */
if (MSFPBUFLEN (msfp) >= MINRECLEN)
{
int parselen = MSFPBUFLEN (msfp);
/* Limit the parse length to offset of pack header if present in the buffer */
if (msfp->packhdroffset && msfp->packhdroffset < (msfp->filepos + MSFPBUFLEN (msfp)))
parselen = msfp->packhdroffset - msfp->filepos;
parseval = msr_parse (MSFPREADPTR (msfp), parselen, ppmsr, reclen, dataflag, verbose);
/* Record detected and parsed */
if (parseval == 0)
{
if (verbose > 1)
ms_log (1, "Read record length of %d bytes\n", (*ppmsr)->reclen);
/* Test if this is the last record if file size is known (not pipe) */
if (last && msfp->filesize)
if ((msfp->filesize - (msfp->filepos + (*ppmsr)->reclen)) < MINRECLEN)
*last = 1;
/* Return file position for this record */
if (fpos)
*fpos = msfp->filepos;
/* Update reading offset, file position and record count */
msfp->readoffset += (*ppmsr)->reclen;
msfp->filepos += (*ppmsr)->reclen;
msfp->recordcount++;
retcode = MS_NOERROR;
break;
}
else if (parseval < 0)
{
/* Skip non-data if requested */
if (skipnotdata)
{
if (verbose > 1)
{
if (MS_ISVALIDBLANK ((char *)MSFPREADPTR (msfp)))
ms_log (1, "Skipped %d bytes of blank/noise record at byte offset %" PRId64 "\n",
MINRECLEN, msfp->filepos);
else
ms_log (1, "Skipped %d bytes of non-data record at byte offset %" PRId64 "\n",
MINRECLEN, msfp->filepos);
}
/* Skip MINRECLEN bytes, update reading offset and file position */
msfp->readoffset += MINRECLEN;
msfp->filepos += MINRECLEN;
}
/* Parsing errors */
else
{
ms_log (2, "Cannot detect record at byte offset %" PRId64 ": %s\n",
msfp->filepos, msfile);
/* Print common errors and raw details if verbose */
ms_parse_raw (MSFPREADPTR (msfp), MSFPBUFLEN (msfp), verbose, -1);
retcode = parseval;
break;
}
}
else /* parseval > 0 (found record but need more data) */
{
/* Determine implied record length if needed */
int32_t impreclen = reclen;
/* Check for parse hints that are larger than MAXRECLEN */
if ((MSFPBUFLEN (msfp) + parseval) > MAXRECLEN)
{
if (skipnotdata)
{
/* Skip MINRECLEN bytes, update reading offset and file position */
msfp->readoffset += MINRECLEN;
msfp->filepos += MINRECLEN;
}
else
{
retcode = MS_OUTOFRANGE;
break;
}
}
/* Pack header check, if pack header offset is within buffer */
else if (impreclen <= 0 && msfp->packhdroffset &&
msfp->packhdroffset < (msfp->filepos + MSFPBUFLEN (msfp)))
{
impreclen = msfp->packhdroffset - msfp->filepos;
/* Check that record length is within range and a power of 2.
* Power of two if (X & (X - 1)) == 0 */
if (impreclen >= MINRECLEN && impreclen <= MAXRECLEN &&
(impreclen & (impreclen - 1)) == 0)
{
/* Set the record length implied by the next pack header */
reclen = impreclen;
}
else
{
ms_log (1, "Implied record length (%d) is invalid\n", impreclen);
retcode = MS_NOTSEED;
break;
}
}
/* End of file check */
else if (impreclen <= 0 && feof (msfp->fp))
{
impreclen = msfp->filesize - msfp->filepos;
/* Check that record length is within range and a power of 2.
* Power of two if (X & (X - 1)) == 0 */
if (impreclen >= MINRECLEN && impreclen <= MAXRECLEN &&
(impreclen & (impreclen - 1)) == 0)
{
/* Set the record length implied by the end of the file */
reclen = impreclen;
}
/* Otherwise a trucated record */
else
{
if (verbose)
{
if (msfp->filesize)
ms_log (1, "Truncated record at byte offset %" PRId64 ", filesize %d: %s\n",
msfp->filepos, msfp->filesize, msfile);
else
ms_log (1, "Truncated record at byte offset %" PRId64 "\n",
msfp->filepos);
}
retcode = MS_ENDOFFILE;
break;
}
}
}
} /* End of record detection */
/* Finished when within MINRECLEN from EOF and buffer less than MINRECLEN */
if ((msfp->filesize - msfp->filepos) < MINRECLEN && MSFPBUFLEN (msfp) < MINRECLEN)
{
if (msfp->recordcount == 0 && msfp->packtype == 0)
{
if (verbose > 0)
ms_log (2, "%s: No data records read, not SEED?\n", msfile);
retcode = MS_NOTSEED;
}
else
{
retcode = MS_ENDOFFILE;
}
break;
}
} /* End of reading, record detection and parsing loop */
/* Cleanup target MSRecord if returning an error */
if (retcode != MS_NOERROR)
{
msr_free (ppmsr);
}
return retcode;
} /* End of ms_readmsr_main() */
/************************************************************************
* msr_unpack_data:
*
* Unpack Mini-SEED data samples for a given MSRecord. The packed
* data is accessed in the record indicated by MSRecord->record and
* the unpacked samples are placed in MSRecord->datasamples. The
* resulting data samples are either 32-bit integers, 32-bit floats
* or 64-bit floats in host byte order.
*
* Return number of samples unpacked or negative libmseed error code.
************************************************************************/
static int
msr_unpack_data ( MSRecord *msr, int swapflag, int verbose )
{
int datasize; /* byte size of data samples in record */
int nsamples; /* number of samples unpacked */
int unpacksize; /* byte size of unpacked samples */
int samplesize = 0; /* size of the data samples in bytes */
const char *dbuf;
int32_t *diffbuff;
int32_t x0, xn;
/* Sanity record length */
if ( msr->reclen == -1 )
{
ms_log (2, "msr_unpack_data(%s): Record size unknown\n",
UNPACK_SRCNAME_2);
return MS_NOTSEED;
}
switch (msr->encoding)
{
case DE_ASCII:
samplesize = 1; break;
case DE_INT16:
case DE_INT32:
case DE_FLOAT32:
case DE_STEIM1:
case DE_STEIM2:
case DE_GEOSCOPE24:
case DE_GEOSCOPE163:
case DE_GEOSCOPE164:
case DE_CDSN:
case DE_SRO:
case DE_DWWSSN:
samplesize = 4; break;
case DE_FLOAT64:
samplesize = 8; break;
default:
samplesize = 0; break;
}
/* Calculate buffer size needed for unpacked samples */
unpacksize = msr->samplecnt * samplesize;
/* (Re)Allocate space for the unpacked data */
if ( unpacksize > 0 )
{
msr->datasamples = realloc (msr->datasamples, unpacksize);
if ( msr->datasamples == NULL )
{
ms_log (2, "msr_unpack_data(%s): Cannot (re)allocate memory\n",
UNPACK_SRCNAME_2);
return MS_GENERROR;
}
}
else
{
if ( msr->datasamples )
free (msr->datasamples);
msr->datasamples = 0;
msr->numsamples = 0;
}
datasize = msr->reclen - msr->fsdh->data_offset;
dbuf = msr->record + msr->fsdh->data_offset;
if ( verbose > 2 )
ms_log (1, "%s: Unpacking %d samples\n",
UNPACK_SRCNAME_2, msr->samplecnt);
/* Decide if this is a encoding that we can decode */
switch (msr->encoding)
{
case DE_ASCII:
if ( verbose > 1 )
ms_log (1, "%s: Found ASCII data\n", UNPACK_SRCNAME_2);
nsamples = msr->samplecnt;
memcpy (msr->datasamples, dbuf, nsamples);
msr->sampletype = 'a';
break;
case DE_INT16:
if ( verbose > 1 )
ms_log (1, "%s: Unpacking INT-16 data samples\n", UNPACK_SRCNAME_2);
nsamples = msr_unpack_int_16 ((int16_t *)dbuf, msr->samplecnt,
msr->samplecnt, msr->datasamples,
swapflag);
msr->sampletype = 'i';
break;
case DE_INT32:
if ( verbose > 1 )
ms_log (1, "%s: Unpacking INT-32 data samples\n", UNPACK_SRCNAME_2);
nsamples = msr_unpack_int_32 ((int32_t *)dbuf, msr->samplecnt,
msr->samplecnt, msr->datasamples,
swapflag);
msr->sampletype = 'i';
break;
case DE_FLOAT32:
if ( verbose > 1 )
ms_log (1, "%s: Unpacking FLOAT-32 data samples\n", UNPACK_SRCNAME_2);
nsamples = msr_unpack_float_32 ((float *)dbuf, msr->samplecnt,
msr->samplecnt, msr->datasamples,
swapflag);
msr->sampletype = 'f';
break;
case DE_FLOAT64:
if ( verbose > 1 )
ms_log (1, "%s: Unpacking FLOAT-64 data samples\n", UNPACK_SRCNAME_2);
nsamples = msr_unpack_float_64 ((double *)dbuf, msr->samplecnt,
msr->samplecnt, msr->datasamples,
swapflag);
msr->sampletype = 'd';
break;
case DE_STEIM1:
diffbuff = (int32_t *) malloc(unpacksize);
if ( diffbuff == NULL )
{
ms_log (2, "msr_unpack_data(%s): Cannot allocate diff buffer\n",
UNPACK_SRCNAME_2);
return MS_GENERROR;
}
if ( verbose > 1 )
ms_log (1, "%s: Unpacking Steim-1 data frames\n", UNPACK_SRCNAME_2);
nsamples = msr_unpack_steim1 ((FRAME *)dbuf, datasize, msr->samplecnt,
msr->samplecnt, msr->datasamples, diffbuff,
&x0, &xn, swapflag, verbose);
msr->sampletype = 'i';
free (diffbuff);
break;
case DE_STEIM2:
diffbuff = (int32_t *) malloc(unpacksize);
if ( diffbuff == NULL )
{
ms_log (2, "msr_unpack_data(%s): Cannot allocate diff buffer\n",
UNPACK_SRCNAME_2);
return MS_GENERROR;
}
if ( verbose > 1 )
ms_log (1, "%s: Unpacking Steim-2 data frames\n", UNPACK_SRCNAME_2);
nsamples = msr_unpack_steim2 ((FRAME *)dbuf, datasize, msr->samplecnt,
msr->samplecnt, msr->datasamples, diffbuff,
&x0, &xn, swapflag, verbose);
msr->sampletype = 'i';
free (diffbuff);
break;
case DE_GEOSCOPE24:
case DE_GEOSCOPE163:
case DE_GEOSCOPE164:
if ( verbose > 1 )
{
if ( msr->encoding == DE_GEOSCOPE24 )
ms_log (1, "%s: Unpacking GEOSCOPE 24bit integer data samples\n",
UNPACK_SRCNAME_2);
if ( msr->encoding == DE_GEOSCOPE163 )
ms_log (1, "%s: Unpacking GEOSCOPE 16bit gain ranged/3bit exponent data samples\n",
UNPACK_SRCNAME_2);
if ( msr->encoding == DE_GEOSCOPE164 )
ms_log (1, "%s: Unpacking GEOSCOPE 16bit gain ranged/4bit exponent data samples\n",
UNPACK_SRCNAME_2);
}
nsamples = msr_unpack_geoscope (dbuf, msr->samplecnt, msr->samplecnt,
msr->datasamples, msr->encoding, swapflag);
msr->sampletype = 'f';
break;
case DE_CDSN:
if ( verbose > 1 )
ms_log (1, "%s: Unpacking CDSN encoded data samples\n", UNPACK_SRCNAME_2);
nsamples = msr_unpack_cdsn ((int16_t *)dbuf, msr->samplecnt, msr->samplecnt,
msr->datasamples, swapflag);
msr->sampletype = 'i';
break;
case DE_SRO:
if ( verbose > 1 )
ms_log (1, "%s: Unpacking SRO encoded data samples\n", UNPACK_SRCNAME_2);
nsamples = msr_unpack_sro ((int16_t *)dbuf, msr->samplecnt, msr->samplecnt,
msr->datasamples, swapflag);
msr->sampletype = 'i';
break;
case DE_DWWSSN:
if ( verbose > 1 )
ms_log (1, "%s: Unpacking DWWSSN encoded data samples\n", UNPACK_SRCNAME_2);
nsamples = msr_unpack_dwwssn ((int16_t *)dbuf, msr->samplecnt, msr->samplecnt,
msr->datasamples, swapflag);
msr->sampletype = 'i';
break;
default:
ms_log (2, "%s: Unsupported encoding format %d (%s)\n",
UNPACK_SRCNAME_2, msr->encoding, (char *) ms_encodingstr(msr->encoding));
return MS_UNKNOWNFORMAT;
}
return nsamples;
} /* End of msr_unpack_data() */
/***************************************************************************
* readregexfile:
*
* Read a list of regular expressions from a file and combine them
* into a single, compound expression which is returned in *pppattern.
* The return buffer is reallocated as need to hold the growing
* pattern. When called *pppattern should not point to any associated
* memory.
*
* Returns the number of regexes parsed from the file or -1 on error.
***************************************************************************/
static int
readregexfile (char *regexfile, char **pppattern)
{
FILE *fp;
char line[1024];
char linepattern[1024];
int regexcnt = 0;
int lengthbase;
int lengthadd;
if ( ! regexfile )
{
ms_log (2, "readregexfile: regex file not supplied\n");
return -1;
}
if ( ! pppattern )
{
ms_log (2, "readregexfile: pattern string buffer not supplied\n");
return -1;
}
/* Open the regex list file */
if ( (fp = fopen (regexfile, "rb")) == NULL )
{
ms_log (2, "Cannot open regex list file %s: %s\n",
regexfile, strerror (errno));
return -1;
}
if ( verbose )
ms_log (1, "Reading regex list from %s\n", regexfile);
*pppattern = NULL;
while ( (fgets (line, sizeof(line), fp)) != NULL)
{
/* Trim spaces and skip if empty lines */
if ( sscanf (line, " %s ", linepattern) != 1 )
continue;
/* Skip comment lines */
if ( *linepattern == '#' )
continue;
regexcnt++;
/* Add regex to compound regex */
if ( *pppattern )
{
lengthbase = strlen(*pppattern);
lengthadd = strlen(linepattern) + 4; /* Length of addition plus 4 characters: |()\0 */
*pppattern = realloc (*pppattern, lengthbase + lengthadd);
if ( *pppattern )
{
snprintf ((*pppattern)+lengthbase, lengthadd, "|(%s)", linepattern);
}
else
{
ms_log (2, "Cannot allocate memory for regex string\n");
return -1;
}
}
else
{
lengthadd = strlen(linepattern) + 3; /* Length of addition plus 3 characters: ()\0 */
*pppattern = malloc (lengthadd);
if ( *pppattern )
{
snprintf (*pppattern, lengthadd, "(%s)", linepattern);
}
else
{
ms_log (2, "Cannot allocate memory for regex string\n");
return -1;
}
}
}
fclose (fp);
return regexcnt;
} /* End of readregexfile() */
// Function that reads from a MiniSEED binary file from a char buffer and
// returns a LinkedIDList.
LinkedIDList *
readMSEEDBuffer (char *mseed, int buflen, Selections *selections, flag
unpack_data, int reclen, flag verbose, flag details,
int header_byteorder, long long (*allocData) (int, char),
void (*diag_print) (char*), void (*log_print) (char*))
{
int retcode = 0;
int retval = 0;
flag swapflag = 0;
flag bigendianhost = ms_bigendianhost();
// current offset of mseed char pointer
int offset = 0;
// Unpack without reading the data first
flag dataflag = 0;
// the timing_qual of BLK 1001
uint8_t timing_qual = 0xFF;
// the calibration type, availability of BLK 300, 310, 320, 390, 395
int8_t calibration_type = -1;
// Init all the pointers to NULL. Most compilers should do this anyway.
LinkedIDList * idListHead = NULL;
LinkedIDList * idListCurrent = NULL;
LinkedIDList * idListLast = NULL;
MSRecord *msr = NULL;
ContinuousSegment * segmentCurrent = NULL;
hptime_t lastgap = 0;
hptime_t hptimetol = 0;
hptime_t nhptimetol = 0;
long long data_offset;
LinkedRecordList *recordHead = NULL;
LinkedRecordList *recordPrevious = NULL;
LinkedRecordList *recordCurrent = NULL;
int datasize;
int record_count = 0;
// A negative verbosity suppresses as much as possible.
if (verbose < 0) {
ms_loginit(&empty_print, NULL, &empty_print, NULL);
}
else {
ms_loginit(log_print, "INFO: ", diag_print, "ERROR: ");
}
if (header_byteorder >= 0) {
// Enforce little endian.
if (header_byteorder == 0) {
MS_UNPACKHEADERBYTEORDER(0);
}
// Enforce big endian.
else {
MS_UNPACKHEADERBYTEORDER(1);
}
}
else {
MS_UNPACKHEADERBYTEORDER(-1);
}
// Read all records and save them in a linked list.
while (offset < buflen) {
msr = msr_init(NULL);
if ( msr == NULL ) {
ms_log (2, "readMSEEDBuffer(): Error initializing msr\n");
return NULL;
}
if (verbose > 1) {
ms_log(0, "readMSEEDBuffer(): calling msr_parse with "
"mseed+offset=%d+%d, buflen=%d, reclen=%d, dataflag=%d, verbose=%d\n",
mseed, offset, buflen, reclen, dataflag, verbose);
}
// If the record length is given, make sure at least that amount of data is available.
if (reclen != -1) {
if (offset + reclen > buflen) {
ms_log(1, "readMSEEDBuffer(): Last reclen exceeds buflen, skipping.\n");
msr_free(&msr);
break;
}
}
// Otherwise assume the smallest possible record length and assure that enough
// data is present.
else {
if (offset + MINRECLEN > buflen) {
ms_log(1, "readMSEEDBuffer(): Last record only has %i byte(s) which "
"is not enough to constitute a full SEED record. Corrupt data? "
"Record will be skipped.\n", buflen - offset);
msr_free(&msr);
break;
}
}
// Skip empty or noise records.
if (OBSPY_ISVALIDBLANK(mseed + offset)) {
offset += MINRECLEN;
continue;
}
// Pass (buflen - offset) because msr_parse() expects only a single record. This
// way libmseed can take care to not overstep bounds.
// Return values:
// 0 : Success, populates the supplied MSRecord.
// >0 : Data record detected but not enough data is present, the
// return value is a hint of how many more bytes are needed.
// <0 : libmseed error code (listed in libmseed.h) is returned.
retcode = msr_parse ((mseed+offset), buflen - offset, &msr, reclen, dataflag, verbose);
// Handle error.
if (retcode < 0) {
log_error(retcode, offset);
msr_free(&msr);
break;
}
// msr_parse() returns > 0 if a data record has been detected but the buffer either has not enough
// data (this cannot happen with ObsPy's logic) or the last record has no Blockette 1000 and it cannot
// determine the record length because there is no next record (this can happen in ObsPy) - handle that
// case by just calling msr_parse() with an explicit record length set.
else if ( retcode > 0 && retcode < (buflen - offset)) {
// Check if the remaining bytes can exactly make up a record length.
int r_bytes = buflen - offset;
float exp = log10((float)r_bytes) / log10(2.0);
if ((fmodf(exp, 1.0) < 0.0000001) && ((int)roundf_(exp) >= 7) && ((int)roundf_(exp) <= 256)) {
retcode = msr_parse((mseed + offset), buflen - offset, &msr, r_bytes, dataflag, verbose);
if ( retcode != 0 ) {
log_error(retcode, offset);
msr_free(&msr);
break;
}
}
else {
msr_free(&msr);
break;
}
}
if (offset + msr->reclen > buflen) {
ms_log(1, "readMSEEDBuffer(): Last msr->reclen exceeds buflen, skipping.\n");
msr_free(&msr);
break;
}
// Test against selections if supplied
if ( selections ) {
char srcname[50];
hptime_t endtime;
msr_srcname (msr, srcname, 1);
endtime = msr_endtime (msr);
if ( ms_matchselect (selections, srcname, msr->starttime, endtime, NULL) == NULL ) {
// Add the record length for the next iteration
offset += msr->reclen;
// Free record.
msr_free(&msr);
continue;
}
}
record_count += 1;
recordCurrent = lrl_init ();
// Append to linked record list if one exists.
if ( recordHead != NULL ) {
recordPrevious->next = recordCurrent;
recordCurrent->previous = recordPrevious;
recordCurrent->next = NULL;
recordPrevious = recordCurrent;
}
// Otherwise create a new one.
else {
recordHead = recordCurrent;
recordCurrent->previous = NULL;
recordPrevious = recordCurrent;
}
recordCurrent->record = msr;
// Figure out if the byte-order of the data has to be swapped.
swapflag = 0;
// If blockette 1000 is present, use it.
if ( msr->Blkt1000 != 0) {
/* If BE host and LE data need swapping */
if ( bigendianhost && msr->byteorder == 0 ) {
swapflag = 1;
}
/* If LE host and BE data (or bad byte order value) need swapping */
if ( !bigendianhost && msr->byteorder > 0 ) {
swapflag = 1;
}
}
// Otherwise assume the data has the same byte order as the header.
// This needs to be done on the raw header bytes as libmseed only returns
// header fields in the native byte order.
else {
unsigned char* _t = (unsigned char*)mseed + offset + 20;
unsigned int year = _t[0] | _t[1] << 8;
unsigned int day = _t[2] | _t[3] << 8;
// Swap data if header needs to be swapped.
if (!MS_ISVALIDYEARDAY(year, day)) {
swapflag = 1;
}
}
// Actually unpack the data if the flag is not set and if the data
// offset is valid.
if ((unpack_data != 0) && (msr->fsdh->data_offset >= 48) &&
(msr->fsdh->data_offset < msr->reclen) &&
(msr->samplecnt > 0)) {
retval = msr_unpack_data (msr, swapflag, verbose);
}
if ( retval > 0 ) {
msr->numsamples = retval;
}
if ( msr->fsdh->start_time.fract > 9999 ) {
ms_log(1, "readMSEEDBuffer(): Record with offset=%d has a "
"fractional second (.0001 seconds) of %d. This is not "
"strictly valid but will be interpreted as one or more "
"additional seconds.",
offset, msr->fsdh->start_time.fract);
}
// Add the record length for the next iteration
offset += msr->reclen;
}
// Return empty id list if no records could be found.
if (record_count == 0) {
idListHead = lil_init();
return idListHead;
}
// All records that match the selection are now stored in a LinkedRecordList
// that starts at recordHead. The next step is to sort them by matching ids
// and then by time.
recordCurrent = recordHead;
while (recordCurrent != NULL) {
// Check if the ID of the record is already available and if not create a
// new one.
// Start with the last id as it is most likely to be the correct one.
idListCurrent = idListLast;
while (idListCurrent != NULL) {
if (strcmp(idListCurrent->network, recordCurrent->record->network) == 0 &&
strcmp(idListCurrent->station, recordCurrent->record->station) == 0 &&
strcmp(idListCurrent->location, recordCurrent->record->location) == 0 &&
strcmp(idListCurrent->channel, recordCurrent->record->channel) == 0 &&
idListCurrent->dataquality == recordCurrent->record->dataquality) {
break;
}
else {
idListCurrent = idListCurrent->previous;
}
}
// Create a new id list if one is needed.
if (idListCurrent == NULL) {
idListCurrent = lil_init();
idListCurrent->previous = idListLast;
if (idListLast != NULL) {
idListLast->next = idListCurrent;
}
idListLast = idListCurrent;
if (idListHead == NULL) {
idListHead = idListCurrent;
}
// Set the IdList attributes.
strcpy(idListCurrent->network, recordCurrent->record->network);
strcpy(idListCurrent->station, recordCurrent->record->station);
strcpy(idListCurrent->location, recordCurrent->record->location);
strcpy(idListCurrent->channel, recordCurrent->record->channel);
idListCurrent->dataquality = recordCurrent->record->dataquality;
}
// Now check if the current record fits exactly to the end of the last
// segment of the current id. If not create a new segment. Therefore
// if records with the same id are in wrong order a new segment will be
// created. This is on purpose.
segmentCurrent = idListCurrent->lastSegment;
if (segmentCurrent != NULL) {
hptimetol = (hptime_t) (0.5 * segmentCurrent->hpdelta);
nhptimetol = ( hptimetol ) ? -hptimetol : 0;
lastgap = recordCurrent->record->starttime - segmentCurrent->endtime - segmentCurrent->hpdelta;
}
if (details == 1) {
/* extract information on calibration BLKs */
calibration_type = -1;
if (recordCurrent->record->blkts) {
BlktLink *cur_blkt = recordCurrent->record->blkts;
while (cur_blkt) {
switch (cur_blkt->blkt_type) {
case 300:
calibration_type = 1;
break;
case 310:
calibration_type = 2;
break;
case 320:
calibration_type = 3;
break;
case 390:
calibration_type = 4;
break;
case 395:
calibration_type = -2;
break;
default:
break;
}
cur_blkt = cur_blkt->next;
}
}
/* extract information based on timing quality */
timing_qual = 0xFF;
if (recordCurrent->record->Blkt1001 != 0) {
timing_qual = recordCurrent->record->Blkt1001->timing_qual;
}
}
if ( segmentCurrent != NULL &&
// This is important for zero data record coupled with not unpacking
// the data. It needs to be split in two places: Before the zero data
// record and after it.
recordCurrent->record->samplecnt > 0 && segmentCurrent->samplecnt > 0 &&
segmentCurrent->sampletype == recordCurrent->record->sampletype &&
// Test the default sample rate tolerance: abs(1-sr1/sr2) < 0.0001
MS_ISRATETOLERABLE (segmentCurrent->samprate, recordCurrent->record->samprate) &&
// Check if the times are within the time tolerance
lastgap <= hptimetol && lastgap >= nhptimetol &&
segmentCurrent->timing_qual == timing_qual &&
segmentCurrent->calibration_type == calibration_type) {
recordCurrent->previous = segmentCurrent->lastRecord;
segmentCurrent->lastRecord = segmentCurrent->lastRecord->next = recordCurrent;
segmentCurrent->samplecnt += recordCurrent->record->samplecnt;
segmentCurrent->endtime = msr_endtime(recordCurrent->record);
}
// Otherwise create a new segment and add the current record.
else {
segmentCurrent = seg_init();
segmentCurrent->previous = idListCurrent->lastSegment;
if (idListCurrent->lastSegment != NULL) {
idListCurrent->lastSegment->next = segmentCurrent;
}
else {
idListCurrent->firstSegment = segmentCurrent;
}
idListCurrent->lastSegment = segmentCurrent;
segmentCurrent->starttime = recordCurrent->record->starttime;
segmentCurrent->endtime = msr_endtime(recordCurrent->record);
segmentCurrent->samprate = recordCurrent->record->samprate;
segmentCurrent->sampletype = recordCurrent->record->sampletype;
segmentCurrent->samplecnt = recordCurrent->record->samplecnt;
// Calculate high-precision sample period
segmentCurrent->hpdelta = (hptime_t) (( recordCurrent->record->samprate ) ?
(HPTMODULUS / recordCurrent->record->samprate) : 0.0);
segmentCurrent->timing_qual = timing_qual;
segmentCurrent->calibration_type = calibration_type;
segmentCurrent->firstRecord = segmentCurrent->lastRecord = recordCurrent;
recordCurrent->previous = NULL;
}
recordPrevious = recordCurrent->next;
recordCurrent->next = NULL;
recordCurrent = recordPrevious;
}
// Now loop over all segments, combine the records and free the msr
// structures.
idListCurrent = idListHead;
while (idListCurrent != NULL)
{
segmentCurrent = idListCurrent->firstSegment;
while (segmentCurrent != NULL) {
if (segmentCurrent->datasamples) {
free(segmentCurrent->datasamples);
}
// Allocate data via a callback function.
if (unpack_data != 0) {
segmentCurrent->datasamples = (void *) allocData(segmentCurrent->samplecnt, segmentCurrent->sampletype);
}
// Loop over all records, write the data to the buffer and free the msr structures.
recordCurrent = segmentCurrent->firstRecord;
data_offset = (long long)(segmentCurrent->datasamples);
while (recordCurrent != NULL) {
datasize = recordCurrent->record->samplecnt * ms_samplesize(recordCurrent->record->sampletype);
memcpy((void *)data_offset, recordCurrent->record->datasamples, datasize);
// Free the record.
msr_free(&(recordCurrent->record));
// Increase the data_offset and the record.
data_offset += (long long)datasize;
recordCurrent = recordCurrent->next;
}
segmentCurrent = segmentCurrent->next;
}
idListCurrent = idListCurrent->next;
}
return idListHead;
}
// Function that reads from a MiniSEED binary file from a char buffer and
// returns a LinkedIDList.
LinkedIDList *
readMSEEDBuffer (char *mseed, int buflen, Selections *selections, flag
unpack_data, int reclen, flag verbose, flag details,
int header_byteorder, long (*allocData) (int, char),
void (*diag_print) (char*), void (*log_print) (char*))
{
int retcode = 0;
int retval = 0;
flag swapflag = 0;
// current offset of mseed char pointer
int offset = 0;
// Unpack without reading the data first
flag dataflag = 0;
// the timing_qual of BLK 1001
uint8_t timing_qual = 0xFF;
// the calibration type, availability of BLK 300, 310, 320, 390, 395
int8_t calibration_type = -1;
// Init all the pointers to NULL. Most compilers should do this anyway.
LinkedIDList * idListHead = NULL;
LinkedIDList * idListCurrent = NULL;
LinkedIDList * idListLast = NULL;
MSRecord *msr = NULL;
ContinuousSegment * segmentCurrent = NULL;
hptime_t lastgap = 0;
hptime_t hptimetol = 0;
hptime_t nhptimetol = 0;
long data_offset;
LinkedRecordList *recordHead = NULL;
LinkedRecordList *recordPrevious = NULL;
LinkedRecordList *recordCurrent = NULL;
int datasize;
int record_count = 0;
// A negative verbosity suppressed as much as possible.
if (verbose < 0) {
ms_loginit(&empty_print, NULL, &empty_print, NULL);
}
else {
ms_loginit(log_print, "INFO: ", diag_print, "ERROR: ");
}
if (header_byteorder >= 0) {
// Enforce little endian.
if (header_byteorder == 0) {
MS_UNPACKHEADERBYTEORDER(0);
}
// Enforce big endian.
else {
MS_UNPACKHEADERBYTEORDER(1);
}
}
else {
MS_UNPACKHEADERBYTEORDER(-1);
}
//
// Read all records and save them in a linked list.
//
while (offset < buflen) {
msr = msr_init(NULL);
if ( msr == NULL ) {
ms_log (2, "readMSEEDBuffer(): Error initializing msr\n");
return NULL;
}
if (verbose > 1) {
ms_log(0, "readMSEEDBuffer(): calling msr_parse with "
"mseed+offset=%d+%d, buflen=%d, reclen=%d, dataflag=%d, verbose=%d\n",
mseed, offset, buflen, reclen, dataflag, verbose);
}
// If the record length is given, make sure at least that amount of data is available.
if (reclen != -1) {
if (offset + reclen > buflen) {
ms_log(1, "readMSEEDBuffer(): Last reclen exceeds buflen, skipping.\n");
msr_free(&msr);
break;
}
}
// Otherwise assume the smallest possible record length and assure that enough
// data is present.
else {
if (offset + 256 > buflen) {
ms_log(1, "readMSEEDBuffer(): Last record only has %i byte(s) which "
"is not enough to constitute a full SEED record. Corrupt data? "
"Record will be skipped.\n", buflen - offset);
msr_free(&msr);
break;
}
}
// Pass (buflen - offset) because msr_parse() expects only a single record. This
// way libmseed can take care to not overstep bounds.
retcode = msr_parse ( (mseed+offset), buflen - offset, &msr, reclen, dataflag, verbose);
if (retcode != MS_NOERROR) {
switch ( retcode ) {
case MS_ENDOFFILE:
ms_log(1, "readMSEEDBuffer(): Unexpected end of file when "
"parsing record starting at offset %d. The rest "
"of the file will not be read.\n", offset);
break;
case MS_GENERROR:
ms_log(1, "readMSEEDBuffer(): Generic error when parsing "
"record starting at offset %d. The rest of the "
"file will not be read.\n", offset);
break;
case MS_NOTSEED:
ms_log(1, "readMSEEDBuffer(): Record starting at offset "
"%d is not valid SEED. The rest of the file "
"will not be read.\n", offset);
break;
case MS_WRONGLENGTH:
ms_log(1, "readMSEEDBuffer(): Length of data read was not "
"correct when parsing record starting at "
"offset %d. The rest of the file will not be "
"read.\n", offset);
break;
case MS_OUTOFRANGE:
ms_log(1, "readMSEEDBuffer(): SEED record length out of "
"range for record starting at offset %d. The "
"rest of the file will not be read.\n", offset);
break;
case MS_UNKNOWNFORMAT:
ms_log(1, "readMSEEDBuffer(): Unknown data encoding "
"format for record starting at offset %d. The "
"rest of the file will not be read.\n", offset);
break;
case MS_STBADCOMPFLAG:
ms_log(1, "readMSEEDBuffer(): Invalid STEIM compression "
"flag(s) in record starting at offset %d. The "
"rest of the file will not be read.\n", offset);
break;
default:
ms_log(1, "readMSEEDBuffer(): Unknown error '%d' in "
"record starting at offset %d. The rest of the "
"file will not be read.\n", retcode, offset);
break;
}
msr_free(&msr);
break;
}
if (offset + msr->reclen > buflen) {
ms_log(1, "readMSEEDBuffer(): Last msr->reclen exceeds buflen, skipping.\n");
msr_free(&msr);
break;
}
// Test against selections if supplied
if ( selections ) {
char srcname[50];
hptime_t endtime;
msr_srcname (msr, srcname, 1);
endtime = msr_endtime (msr);
if ( ms_matchselect (selections, srcname, msr->starttime, endtime, NULL) == NULL ) {
// Add the record length for the next iteration
offset += msr->reclen;
// Free record.
msr_free(&msr);
continue;
}
}
record_count += 1;
recordCurrent = lrl_init ();
// Append to linked record list if one exists.
if ( recordHead != NULL ) {
recordPrevious->next = recordCurrent;
recordCurrent->previous = recordPrevious;
recordCurrent->next = NULL;
recordPrevious = recordCurrent;
}
// Otherwise create a new one.
else {
recordHead = recordCurrent;
recordCurrent->previous = NULL;
recordPrevious = recordCurrent;
}
recordCurrent->record = msr;
// Determine the byte order swapflag only for the very first record.
// The byte order should not change within the file.
// XXX: Maybe check for every record?
if (swapflag <= 0) {
// Returns 0 if the host is little endian, otherwise 1.
flag bigendianhost = ms_bigendianhost();
// Set the swapbyteflag if it is needed.
if ( msr->Blkt1000 != 0) {
/* If BE host and LE data need swapping */
if ( bigendianhost && msr->byteorder == 0 ) {
swapflag = 1;
}
/* If LE host and BE data (or bad byte order value) need swapping */
if ( !bigendianhost && msr->byteorder > 0 ) {
swapflag = 1;
}
}
}
// Actually unpack the data if the flag is not set.
if (unpack_data != 0) {
retval = msr_unpack_data (msr, swapflag, verbose);
}
if ( retval > 0 ) {
msr->numsamples = retval;
}
// Add the record length for the next iteration
offset += msr->reclen;
}
// Return empty id list if no records could be found.
if (record_count == 0) {
idListHead = lil_init();
return idListHead;
}
// All records that match the selection are now stored in a LinkedRecordList
// that starts at recordHead. The next step is to sort them by matching ids
// and then by time.
recordCurrent = recordHead;
while (recordCurrent != NULL) {
// Check if the ID of the record is already available and if not create a
// new one.
// Start with the last id as it is most likely to be the correct one.
idListCurrent = idListLast;
while (idListCurrent != NULL) {
if (strcmp(idListCurrent->network, recordCurrent->record->network) == 0 &&
strcmp(idListCurrent->station, recordCurrent->record->station) == 0 &&
strcmp(idListCurrent->location, recordCurrent->record->location) == 0 &&
strcmp(idListCurrent->channel, recordCurrent->record->channel) == 0 &&
idListCurrent->dataquality == recordCurrent->record->dataquality) {
break;
}
else {
idListCurrent = idListCurrent->previous;
}
}
// Create a new id list if one is needed.
if (idListCurrent == NULL) {
idListCurrent = lil_init();
idListCurrent->previous = idListLast;
if (idListLast != NULL) {
idListLast->next = idListCurrent;
}
idListLast = idListCurrent;
if (idListHead == NULL) {
idListHead = idListCurrent;
}
// Set the IdList attributes.
strcpy(idListCurrent->network, recordCurrent->record->network);
strcpy(idListCurrent->station, recordCurrent->record->station);
strcpy(idListCurrent->location, recordCurrent->record->location);
strcpy(idListCurrent->channel, recordCurrent->record->channel);
idListCurrent->dataquality = recordCurrent->record->dataquality;
}
// Now check if the current record fits exactly to the end of the last
// segment of the current id. If not create a new segment. Therefore
// if records with the same id are in wrong order a new segment will be
// created. This is on purpose.
segmentCurrent = idListCurrent->lastSegment;
if (segmentCurrent != NULL) {
hptimetol = (hptime_t) (0.5 * segmentCurrent->hpdelta);
nhptimetol = ( hptimetol ) ? -hptimetol : 0;
lastgap = recordCurrent->record->starttime - segmentCurrent->endtime - segmentCurrent->hpdelta;
}
if (details == 1) {
/* extract information on calibration BLKs */
calibration_type = -1;
if (recordCurrent->record->blkts) {
BlktLink *cur_blkt = recordCurrent->record->blkts;
while (cur_blkt) {
switch (cur_blkt->blkt_type) {
case 300:
calibration_type = 1;
break;
case 310:
calibration_type = 2;
break;
case 320:
calibration_type = 3;
break;
case 390:
calibration_type = 4;
break;
case 395:
calibration_type = -2;
break;
default:
break;
}
cur_blkt = cur_blkt->next;
}
}
/* extract information based on timing quality */
timing_qual = 0xFF;
if (recordCurrent->record->Blkt1001 != 0) {
timing_qual = recordCurrent->record->Blkt1001->timing_qual;
}
}
if ( segmentCurrent != NULL &&
segmentCurrent->sampletype == recordCurrent->record->sampletype &&
// Test the default sample rate tolerance: abs(1-sr1/sr2) < 0.0001
MS_ISRATETOLERABLE (segmentCurrent->samprate, recordCurrent->record->samprate) &&
// Check if the times are within the time tolerance
lastgap <= hptimetol && lastgap >= nhptimetol &&
segmentCurrent->timing_qual == timing_qual &&
segmentCurrent->calibration_type == calibration_type) {
recordCurrent->previous = segmentCurrent->lastRecord;
segmentCurrent->lastRecord = segmentCurrent->lastRecord->next = recordCurrent;
segmentCurrent->samplecnt += recordCurrent->record->samplecnt;
segmentCurrent->endtime = msr_endtime(recordCurrent->record);
}
// Otherwise create a new segment and add the current record.
else {
segmentCurrent = seg_init();
segmentCurrent->previous = idListCurrent->lastSegment;
if (idListCurrent->lastSegment != NULL) {
idListCurrent->lastSegment->next = segmentCurrent;
}
else {
idListCurrent->firstSegment = segmentCurrent;
}
idListCurrent->lastSegment = segmentCurrent;
segmentCurrent->starttime = recordCurrent->record->starttime;
segmentCurrent->endtime = msr_endtime(recordCurrent->record);
segmentCurrent->samprate = recordCurrent->record->samprate;
segmentCurrent->sampletype = recordCurrent->record->sampletype;
segmentCurrent->samplecnt = recordCurrent->record->samplecnt;
// Calculate high-precision sample period
segmentCurrent->hpdelta = (hptime_t) (( recordCurrent->record->samprate ) ?
(HPTMODULUS / recordCurrent->record->samprate) : 0.0);
segmentCurrent->timing_qual = timing_qual;
segmentCurrent->calibration_type = calibration_type;
segmentCurrent->firstRecord = segmentCurrent->lastRecord = recordCurrent;
recordCurrent->previous = NULL;
}
recordPrevious = recordCurrent->next;
recordCurrent->next = NULL;
recordCurrent = recordPrevious;
}
// Now loop over all segments, combine the records and free the msr
// structures.
idListCurrent = idListHead;
while (idListCurrent != NULL)
{
segmentCurrent = idListCurrent->firstSegment;
while (segmentCurrent != NULL) {
if (segmentCurrent->datasamples) {
free(segmentCurrent->datasamples);
}
// Allocate data via a callback function.
if (unpack_data != 0) {
segmentCurrent->datasamples = (void *) allocData(segmentCurrent->samplecnt, segmentCurrent->sampletype);
}
// Loop over all records, write the data to the buffer and free the msr structures.
recordCurrent = segmentCurrent->firstRecord;
data_offset = (long)(segmentCurrent->datasamples);
while (recordCurrent != NULL) {
datasize = recordCurrent->record->samplecnt * ms_samplesize(recordCurrent->record->sampletype);
memcpy((void *)data_offset, recordCurrent->record->datasamples, datasize);
// Free the record.
msr_free(&(recordCurrent->record));
// Increase the data_offset and the record.
data_offset += (long)datasize;
recordCurrent = recordCurrent->next;
}
segmentCurrent = segmentCurrent->next;
}
idListCurrent = idListCurrent->next;
}
return idListHead;
}
/***************************************************************************
* convertsamples:
*
* Convert samples to type needed for the specified pack encoding.
*
* Returns 0 on success, and -1 on failure
***************************************************************************/
static int
convertsamples (MSRecord *msr, int packencoding)
{
char encodingtype;
int32_t *idata;
float *fdata;
double *ddata;
int idx;
if ( ! msr )
{
ms_log (2, "convertsamples: Error, no MSRecord specified!\n");
return -1;
}
/* Determine sample type needed for pack encoding */
switch (packencoding)
{
case DE_ASCII:
encodingtype = 'a';
break;
case DE_INT16:
case DE_INT32:
case DE_STEIM1:
case DE_STEIM2:
encodingtype = 'i';
break;
case DE_FLOAT32:
encodingtype = 'f';
break;
case DE_FLOAT64:
encodingtype = 'd';
break;
default:
encodingtype = msr->encoding;
break;
}
idata = (int32_t *) msr->datasamples;
fdata = (float *) msr->datasamples;
ddata = (double *) msr->datasamples;
/* Convert sample type if needed */
if ( msr->sampletype != encodingtype )
{
if ( msr->sampletype == 'a' || encodingtype == 'a' )
{
ms_log (2, "Error, cannot convert ASCII samples to/from numeric type\n");
return -1;
}
/* Convert to integers */
else if ( encodingtype == 'i' )
{
if ( msr->sampletype == 'f' ) /* Convert floats to integers with simple rounding */
{
for (idx = 0; idx < msr->numsamples; idx++)
{
/* Check for loss of sub-integer */
if ( (fdata[idx] - (int32_t)fdata[idx]) > 0.000001 )
{
ms_log (2, "Warning, Loss of precision when converting floats to integers, loss: %g\n",
(fdata[idx] - (int32_t)fdata[idx]));
return -1;
}
idata[idx] = (int32_t) (fdata[idx] + 0.5);
}
}
else if ( msr->sampletype == 'd' ) /* Convert doubles to integers with simple rounding */
{
for (idx = 0; idx < msr->numsamples; idx++)
{
/* Check for loss of sub-integer */
if ( (ddata[idx] - (int32_t)ddata[idx]) > 0.000001 )
{
ms_log (2, "Warning, Loss of precision when converting doubles to integers, loss: %g\n",
(ddata[idx] - (int32_t)ddata[idx]));
return -1;
}
idata[idx] = (int32_t) (ddata[idx] + 0.5);
}
/* Reallocate buffer for reduced size needed */
if ( ! (msr->datasamples = realloc (msr->datasamples,(size_t)(msr->numsamples * sizeof(int32_t)))) )
{
ms_log (2, "Error, cannot re-allocate buffer for sample conversion\n");
return -1;
}
}
msr->sampletype = 'i';
}
/* Convert to floats */
else if ( encodingtype == 'f' )
{
if ( msr->sampletype == 'i' ) /* Convert integers to floats */
{
for (idx = 0; idx < msr->numsamples; idx++)
fdata[idx] = (float) idata[idx];
}
else if ( msr->sampletype == 'd' ) /* Convert doubles to floats */
{
for (idx = 0; idx < msr->numsamples; idx++)
fdata[idx] = (float) ddata[idx];
/* Reallocate buffer for reduced size needed */
if ( ! (msr->datasamples = realloc (msr->datasamples, (size_t)(msr->numsamples * sizeof(float)))) )
{
ms_log (2, "Error, cannot re-allocate buffer for sample conversion\n");
return -1;
}
}
msr->sampletype = 'f';
}
/* Convert to doubles */
else if ( encodingtype == 'd' )
{
if ( ! (ddata = (double *) malloc ((size_t)(msr->numsamples * sizeof(double)))) )
{
ms_log (2, "Error, cannot allocate buffer for sample conversion to doubles\n");
return -1;
}
if ( msr->sampletype == 'i' ) /* Convert integers to doubles */
{
for (idx = 0; idx < msr->numsamples; idx++)
ddata[idx] = (double) idata[idx];
free (idata);
}
else if ( msr->sampletype == 'f' ) /* Convert floats to doubles */
{
for (idx = 0; idx < msr->numsamples; idx++)
ddata[idx] = (double) fdata[idx];
free (fdata);
}
msr->datasamples = ddata;
msr->sampletype = 'd';
}
}
return 0;
} /* End of convertsamples() */
/***************************************************************************
* msr_pack_header:
*
* Pack data header/blockettes into the SEED record at
* MSRecord->record. Unlike msr_pack no default values are applied,
* the header structures are expected to be self describing and no
* Blockette 1000 will be added. This routine is only useful for
* re-packing a record header.
*
* Returns the header length in bytes on success and -1 on error.
***************************************************************************/
int
msr_pack_header ( MSRecord *msr, flag normalize, flag verbose )
{
char srcname[50];
char *envvariable;
flag headerswapflag = 0;
int headerlen;
int maxheaderlen;
if ( ! msr )
return -1;
/* Generate source name for MSRecord */
if ( msr_srcname (msr, srcname, 1) == NULL )
{
ms_log (2, "msr_unpack_data(): Cannot generate srcname\n");
return MS_GENERROR;
}
/* Set shared srcname pointer to source name */
PACK_SRCNAME = &srcname[0];
/* Read possible environmental variables that force byteorder */
if ( packheaderbyteorder == -2 )
{
if ( (envvariable = getenv("PACK_HEADER_BYTEORDER")) )
{
if ( *envvariable != '0' && *envvariable != '1' )
{
ms_log (2, "Environment variable PACK_HEADER_BYTEORDER must be set to '0' or '1'\n");
return -1;
}
else if ( *envvariable == '0' )
{
packheaderbyteorder = 0;
if ( verbose > 2 )
ms_log (1, "PACK_HEADER_BYTEORDER=0, packing little-endian header\n");
}
else
{
packheaderbyteorder = 1;
if ( verbose > 2 )
ms_log (1, "PACK_HEADER_BYTEORDER=1, packing big-endian header\n");
}
}
else
{
packheaderbyteorder = -1;
}
}
if ( msr->reclen < MINRECLEN || msr->reclen > MAXRECLEN )
{
ms_log (2, "msr_pack_header(%s): record length is out of range: %d\n",
PACK_SRCNAME, msr->reclen);
return -1;
}
if ( msr->byteorder != 0 && msr->byteorder != 1 )
{
ms_log (2, "msr_pack_header(%s): byte order is not defined correctly: %d\n",
PACK_SRCNAME, msr->byteorder);
return -1;
}
if ( msr->fsdh )
{
maxheaderlen = (msr->fsdh->data_offset > 0) ?
msr->fsdh->data_offset :
msr->reclen;
}
else
{
maxheaderlen = msr->reclen;
}
/* Check to see if byte swapping is needed */
if ( msr->byteorder != ms_bigendianhost() )
headerswapflag = 1;
/* Check if byte order is forced */
if ( packheaderbyteorder >= 0 )
{
headerswapflag = ( msr->byteorder != packheaderbyteorder ) ? 1: 0;
}
if ( verbose > 2 )
{
if ( headerswapflag )
ms_log (1, "%s: Byte swapping needed for packing of header\n", PACK_SRCNAME);
else
ms_log (1, "%s: Byte swapping NOT needed for packing of header\n", PACK_SRCNAME);
}
headerlen = msr_pack_header_raw (msr, msr->record, maxheaderlen,
headerswapflag, normalize, NULL, verbose);
return headerlen;
} /* End of msr_pack_header() */
int
main (int argc, char **argv)
{
MSRecord *msr = 0;
MSTraceGroup *mstg = 0;
MSTrace *mst;
int retcode;
int64_t packedsamples;
int64_t packedrecords;
int lastrecord;
int iseqnum = 1;
#ifndef WIN32
/* Signal handling, use POSIX calls with standardized semantics */
struct sigaction sa;
sa.sa_flags = SA_RESTART;
sigemptyset (&sa.sa_mask);
sa.sa_handler = term_handler;
sigaction (SIGINT, &sa, NULL);
sigaction (SIGQUIT, &sa, NULL);
sigaction (SIGTERM, &sa, NULL);
sa.sa_handler = SIG_IGN;
sigaction (SIGHUP, &sa, NULL);
sigaction (SIGPIPE, &sa, NULL);
#endif
/* Process given parameters (command line and parameter file) */
if (parameter_proc (argc, argv) < 0)
return -1;
/* Setup input encoding format if specified */
if ( encodingstr )
{
int inputencoding = strtoul (encodingstr, NULL, 10);
if ( inputencoding == 0 && errno == EINVAL )
{
ms_log (2, "Error parsing input encoding format: %s\n", encodingstr);
return -1;
}
MS_UNPACKENCODINGFORMAT (inputencoding);
}
/* Init MSTraceGroup */
mstg = mst_initgroup (mstg);
/* Loop over the input file */
while ( (retcode = ms_readmsr (&msr, inputfile, reclen, NULL, &lastrecord,
1, 1, verbose)) == MS_NOERROR )
{
msr_print (msr, ppackets);
/* Convert sample type as needed for packencoding */
if ( packencoding >= 0 && packencoding != msr->encoding )
{
if ( convertsamples (msr, packencoding) )
{
ms_log (2, "Error converting samples for encoding %d\n", packencoding);
break;
}
}
if ( packreclen >= 0 )
msr->reclen = packreclen;
else
packreclen = msr->reclen;
if ( packencoding >= 0 )
msr->encoding = packencoding;
else
packencoding = msr->encoding;
if ( byteorder >= 0 )
msr->byteorder = byteorder;
else
byteorder = msr->byteorder;
/* After unpacking the record, the start time in msr->starttime
is a potentially corrected start time, if correction has been
applied make sure the correction bit flag is set as it will
be used as a packing template. */
if ( msr->fsdh->time_correct && ! (msr->fsdh->act_flags & 0x02) )
{
ms_log (1, "Setting time correction applied flag for %s_%s_%s_%s\n",
msr->network, msr->station, msr->location, msr->channel);
msr->fsdh->act_flags |= 0x02;
}
/* Replace network code */
if ( netcode )
strncpy (msr->network, netcode, sizeof(msr->network));
/* If no samples in the record just pack the header */
if ( outfile && msr->numsamples == 0 )
{
msr_pack_header (msr, 1, verbose);
record_handler (msr->record, msr->reclen, NULL);
}
/* Pack each record individually */
else if ( outfile && ! tracepack )
{
msr->sequence_number = iseqnum;
packedrecords = msr_pack (msr, &record_handler, NULL, &packedsamples, 1, verbose);
if ( packedrecords == -1 )
ms_log (2, "Cannot pack records\n");
else
ms_log (1, "Packed %d records\n", packedrecords);
iseqnum = msr->sequence_number;
}
/* Pack records from a MSTraceGroup */
else if ( outfile && tracepack )
{
mst = mst_addmsrtogroup (mstg, msr, 0, -1.0, -1.0);
if ( ! mst )
{
ms_log (2, "Error adding MSRecord to MStrace!\n");
break;
}
/* Reset sequence number and free previous template */
if ( mst->prvtptr )
{
MSRecord *tmsr = (MSRecord *) mst->prvtptr;
/* Retain sequence number from previous template */
msr->sequence_number = tmsr->sequence_number;
msr_free (&tmsr);
}
else
{
msr->sequence_number = 1;
}
/* Copy MSRecord and store as template */
mst->prvtptr = msr_duplicate (msr, 0);
if ( ! mst->prvtptr )
{
ms_log (2, "Error duplicating MSRecord for template!\n");
break;
}
/* Pack traces based on selected method */
packedrecords = 0;
if ( tracepack == 1 )
{
mst = mstg->traces;
while ( mst )
{
packedrecords += mst_pack (mst, &record_handler, NULL, packreclen,
packencoding, byteorder, &packedsamples,
0, verbose, (MSRecord *)mst->prvtptr);
mst = mst->next;
}
ms_log (1, "Packed %d records\n", packedrecords);
}
if ( tracepack == 2 && lastrecord )
{
mst = mstg->traces;
while ( mst )
{
packedrecords += mst_pack (mst, &record_handler, NULL, packreclen,
packencoding, byteorder, &packedsamples,
1, verbose, (MSRecord *)mst->prvtptr);
mst = mst->next;
}
ms_log (1, "Packed %d records\n", packedrecords);
}
}
}
/* Make sure buffer of input data is flushed */
packedrecords = 0;
if ( tracepack )
{
mst = mstg->traces;
while ( mst )
{
packedrecords += mst_pack (mst, &record_handler, NULL, packreclen,
packencoding, byteorder, &packedsamples,
1, verbose, (MSRecord *)mst->prvtptr);
mst = mst->next;
}
if ( packedrecords )
ms_log (1, "Packed %d records\n", packedrecords);
}
if ( retcode != MS_ENDOFFILE )
ms_log (2, "Error reading %s: %s\n", inputfile, ms_errorstr(retcode));
/* Make sure everything is cleaned up */
ms_readmsr (&msr, NULL, 0, NULL, NULL, 0, 0, 0);
mst_freegroup (&mstg);
if ( outfile )
fclose (outfile);
return 0;
} /* End of main() */
/***************************************************************************
* msr_pack:
*
* Pack data into SEED data records. Using the record header values
* in the MSRecord as a template the common header fields are packed
* into the record header, blockettes in the blockettes chain are
* packed and data samples are packed in the encoding format indicated
* by the MSRecord->encoding field. A Blockette 1000 will be added if
* one is not present.
*
* The MSRecord->datasamples array and MSRecord->numsamples value will
* not be changed by this routine. It is the responsibility of the
* calling routine to adjust the data buffer if desired.
*
* As each record is filled and finished they are passed to
* record_handler which expects 1) a char * to the record, 2) the
* length of the record and 3) a pointer supplied by the original
* caller containing optional private data (handlerdata). It is the
* responsibility of record_handler to process the record, the memory
* will be re-used or freed when record_handler returns.
*
* If the flush flag != 0 all of the data will be packed into data
* records even though the last one will probably not be filled.
*
* Default values are: data record & quality indicator = 'D', record
* length = 4096, encoding = 11 (Steim2) and byteorder = 1 (MSBF).
* The defaults are triggered when the the msr->dataquality is 0 or
* msr->reclen, msr->encoding and msr->byteorder are -1 respectively.
*
* Returns the number of records created on success and -1 on error.
***************************************************************************/
int
msr_pack ( MSRecord * msr, void (*record_handler) (char *, int, void *),
void *handlerdata, int64_t *packedsamples, flag flush, flag verbose )
{
uint16_t *HPnumsamples;
uint16_t *HPdataoffset;
struct blkt_1001_s *HPblkt1001 = NULL;
char *rawrec;
char *envvariable;
char srcname[50];
flag headerswapflag = 0;
flag dataswapflag = 0;
flag packret;
int samplesize;
int headerlen;
int dataoffset;
int maxdatabytes;
int maxsamples;
int recordcnt = 0;
int packsamples, packoffset;
int64_t totalpackedsamples;
hptime_t segstarttime;
if ( ! msr )
return -1;
if ( ! record_handler )
{
ms_log (2, "msr_pack(): record_handler() function pointer not set!\n");
return -1;
}
/* Allocate stream processing state space if needed */
if ( ! msr->ststate )
{
msr->ststate = (StreamState *) malloc (sizeof(StreamState));
if ( ! msr->ststate )
{
ms_log (2, "msr_pack(): Could not allocate memory for StreamState\n");
return -1;
}
memset (msr->ststate, 0, sizeof(StreamState));
}
/* Generate source name for MSRecord */
if ( msr_srcname (msr, srcname, 1) == NULL )
{
ms_log (2, "msr_unpack_data(): Cannot generate srcname\n");
return MS_GENERROR;
}
/* Set shared srcname pointer to source name */
PACK_SRCNAME = &srcname[0];
/* Track original segment start time for new start time calculation */
segstarttime = msr->starttime;
/* Read possible environmental variables that force byteorder */
if ( packheaderbyteorder == -2 )
{
if ( (envvariable = getenv("PACK_HEADER_BYTEORDER")) )
{
if ( *envvariable != '0' && *envvariable != '1' )
{
ms_log (2, "Environment variable PACK_HEADER_BYTEORDER must be set to '0' or '1'\n");
return -1;
}
else if ( *envvariable == '0' )
{
packheaderbyteorder = 0;
if ( verbose > 2 )
ms_log (1, "PACK_HEADER_BYTEORDER=0, packing little-endian header\n");
}
else
{
packheaderbyteorder = 1;
if ( verbose > 2 )
ms_log (1, "PACK_HEADER_BYTEORDER=1, packing big-endian header\n");
}
}
else
{
packheaderbyteorder = -1;
}
}
if ( packdatabyteorder == -2 )
{
if ( (envvariable = getenv("PACK_DATA_BYTEORDER")) )
{
if ( *envvariable != '0' && *envvariable != '1' )
{
ms_log (2, "Environment variable PACK_DATA_BYTEORDER must be set to '0' or '1'\n");
return -1;
}
else if ( *envvariable == '0' )
{
packdatabyteorder = 0;
if ( verbose > 2 )
ms_log (1, "PACK_DATA_BYTEORDER=0, packing little-endian data samples\n");
}
else
{
packdatabyteorder = 1;
if ( verbose > 2 )
ms_log (1, "PACK_DATA_BYTEORDER=1, packing big-endian data samples\n");
}
}
else
{
packdatabyteorder = -1;
}
}
/* Set default indicator, record length, byte order and encoding if needed */
if ( msr->dataquality == 0 ) msr->dataquality = 'D';
if ( msr->reclen == -1 ) msr->reclen = 4096;
if ( msr->byteorder == -1 ) msr->byteorder = 1;
if ( msr->encoding == -1 ) msr->encoding = DE_STEIM2;
/* Cleanup/reset sequence number */
if ( msr->sequence_number <= 0 || msr->sequence_number > 999999)
msr->sequence_number = 1;
if ( msr->reclen < MINRECLEN || msr->reclen > MAXRECLEN )
{
ms_log (2, "msr_pack(%s): Record length is out of range: %d\n",
PACK_SRCNAME, msr->reclen);
return -1;
}
if ( msr->numsamples <= 0 )
{
ms_log (2, "msr_pack(%s): No samples to pack\n", PACK_SRCNAME);
return -1;
}
samplesize = ms_samplesize (msr->sampletype);
if ( ! samplesize )
{
ms_log (2, "msr_pack(%s): Unknown sample type '%c'\n",
PACK_SRCNAME, msr->sampletype);
return -1;
}
/* Sanity check for msr/quality indicator */
if ( ! MS_ISDATAINDICATOR(msr->dataquality) )
{
ms_log (2, "msr_pack(%s): Record header & quality indicator unrecognized: '%c'\n",
PACK_SRCNAME, msr->dataquality);
ms_log (2, "msr_pack(%s): Packing failed.\n", PACK_SRCNAME);
return -1;
}
/* Allocate space for data record */
rawrec = (char *) malloc (msr->reclen);
if ( rawrec == NULL )
{
ms_log (2, "msr_pack(%s): Cannot allocate memory\n", PACK_SRCNAME);
return -1;
}
/* Set header pointers to known offsets into FSDH */
HPnumsamples = (uint16_t *) (rawrec + 30);
HPdataoffset = (uint16_t *) (rawrec + 44);
/* Check to see if byte swapping is needed */
if ( msr->byteorder != ms_bigendianhost() )
headerswapflag = dataswapflag = 1;
/* Check if byte order is forced */
if ( packheaderbyteorder >= 0 )
{
headerswapflag = ( msr->byteorder != packheaderbyteorder ) ? 1 : 0;
}
if ( packdatabyteorder >= 0 )
{
dataswapflag = ( msr->byteorder != packdatabyteorder ) ? 1 : 0;
}
if ( verbose > 2 )
{
if ( headerswapflag && dataswapflag )
ms_log (1, "%s: Byte swapping needed for packing of header and data samples\n", PACK_SRCNAME);
else if ( headerswapflag )
ms_log (1, "%s: Byte swapping needed for packing of header\n", PACK_SRCNAME);
else if ( dataswapflag )
ms_log (1, "%s: Byte swapping needed for packing of data samples\n", PACK_SRCNAME);
else
ms_log (1, "%s: Byte swapping NOT needed for packing\n", PACK_SRCNAME);
}
/* Add a blank 1000 Blockette if one is not present, the blockette values
will be populated in msr_pack_header_raw()/msr_normalize_header() */
if ( ! msr->Blkt1000 )
{
struct blkt_1000_s blkt1000;
memset (&blkt1000, 0, sizeof (struct blkt_1000_s));
if ( verbose > 2 )
ms_log (1, "%s: Adding 1000 Blockette\n", PACK_SRCNAME);
if ( ! msr_addblockette (msr, (char *) &blkt1000, sizeof(struct blkt_1000_s), 1000, 0) )
{
ms_log (2, "msr_pack(%s): Error adding 1000 Blockette\n", PACK_SRCNAME);
return -1;
}
}
headerlen = msr_pack_header_raw (msr, rawrec, msr->reclen, headerswapflag, 1, &HPblkt1001, verbose);
if ( headerlen == -1 )
{
ms_log (2, "msr_pack(%s): Error packing header\n", PACK_SRCNAME);
return -1;
}
/* Determine offset to encoded data */
if ( msr->encoding == DE_STEIM1 || msr->encoding == DE_STEIM2 )
{
dataoffset = 64;
while ( dataoffset < headerlen )
dataoffset += 64;
/* Zero memory between blockettes and data if any */
memset (rawrec + headerlen, 0, dataoffset - headerlen);
}
else
{
dataoffset = headerlen;
}
*HPdataoffset = (uint16_t) dataoffset;
if ( headerswapflag ) ms_gswap2 (HPdataoffset);
/* Determine the max data bytes and sample count */
maxdatabytes = msr->reclen - dataoffset;
if ( msr->encoding == DE_STEIM1 )
{
maxsamples = (int) (maxdatabytes/64) * STEIM1_FRAME_MAX_SAMPLES;
}
else if ( msr->encoding == DE_STEIM2 )
{
maxsamples = (int) (maxdatabytes/64) * STEIM2_FRAME_MAX_SAMPLES;
}
else
{
maxsamples = maxdatabytes / samplesize;
}
/* Pack samples into records */
*HPnumsamples = 0;
totalpackedsamples = 0;
if ( packedsamples ) *packedsamples = 0;
packoffset = 0;
while ( (msr->numsamples - totalpackedsamples) > maxsamples || flush )
{
packret = msr_pack_data (rawrec + dataoffset,
(char *) msr->datasamples + packoffset,
(int)(msr->numsamples - totalpackedsamples), maxdatabytes,
&packsamples, &msr->ststate->lastintsample, msr->ststate->comphistory,
msr->sampletype, msr->encoding, dataswapflag, verbose);
if ( packret )
{
ms_log (2, "msr_pack(%s): Error packing record\n", PACK_SRCNAME);
return -1;
}
packoffset += packsamples * samplesize;
/* Update number of samples */
*HPnumsamples = (uint16_t) packsamples;
if ( headerswapflag ) ms_gswap2 (HPnumsamples);
if ( verbose > 0 )
ms_log (1, "%s: Packed %d samples\n", PACK_SRCNAME, packsamples);
/* Send record to handler */
record_handler (rawrec, msr->reclen, handlerdata);
totalpackedsamples += packsamples;
if ( packedsamples ) *packedsamples = totalpackedsamples;
msr->ststate->packedsamples += packsamples;
/* Update record header for next record */
msr->sequence_number = ( msr->sequence_number >= 999999 ) ? 1 : msr->sequence_number + 1;
if ( msr->samprate > 0 )
msr->starttime = segstarttime + (hptime_t)(totalpackedsamples / msr->samprate * HPTMODULUS + 0.5);
msr_update_header (msr, rawrec, headerswapflag, HPblkt1001, verbose);
recordcnt++;
msr->ststate->packedrecords++;
/* Set compression history flag for subsequent records (Steim encodings) */
if ( ! msr->ststate->comphistory )
msr->ststate->comphistory = 1;
if ( totalpackedsamples >= msr->numsamples )
break;
}
if ( verbose > 2 )
ms_log (1, "%s: Packed %d total samples\n", PACK_SRCNAME, totalpackedsamples);
free (rawrec);
return recordcnt;
} /* End of msr_pack() */
/************************************************************************
* msr_decode_steim1:
*
* Decode Steim1 encoded miniSEED data and place in supplied buffer
* as 32-bit integers.
*
* Return number of samples in output buffer on success, -1 on error.
************************************************************************/
int
msr_decode_steim1 (int32_t *input, int inputlength, int samplecount,
int32_t *output, int outputlength, char *srcname,
int swapflag)
{
int32_t *outputptr = output; /* Pointer to next output sample location */
uint32_t frame[16]; /* Frame, 16 x 32-bit quantities = 64 bytes */
int32_t X0 = 0; /* Forward integration constant, aka first sample */
int32_t Xn = 0; /* Reverse integration constant, aka last sample */
int maxframes = inputlength / 64;
int frameidx;
int startnibble;
int nibble;
int widx;
int diffcount;
int idx;
union dword {
int8_t d8[4];
int16_t d16[2];
int32_t d32;
} * word;
if (inputlength <= 0)
return 0;
if (!input || !output || outputlength <= 0 || maxframes <= 0)
return -1;
if (decodedebug)
ms_log (1, "Decoding %d Steim1 frames, swapflag: %d, srcname: %s\n",
maxframes, swapflag, (srcname) ? srcname : "");
for (frameidx = 0; frameidx < maxframes && samplecount > 0; frameidx++)
{
/* Copy frame, each is 16x32-bit quantities = 64 bytes */
memcpy (frame, input + (16 * frameidx), 64);
/* Save forward integration constant (X0) and reverse integration constant (Xn)
and set the starting nibble index depending on frame. */
if (frameidx == 0)
{
if (swapflag)
{
ms_gswap4a (&frame[1]);
ms_gswap4a (&frame[2]);
}
X0 = frame[1];
Xn = frame[2];
startnibble = 3; /* First frame: skip nibbles, X0, and Xn */
if (decodedebug)
ms_log (1, "Frame %d: X0=%d Xn=%d\n", frameidx, X0, Xn);
}
else
{
startnibble = 1; /* Subsequent frames: skip nibbles */
if (decodedebug)
ms_log (1, "Frame %d\n", frameidx);
}
/* Swap 32-bit word containing the nibbles */
if (swapflag)
ms_gswap4a (&frame[0]);
/* Decode each 32-bit word according to nibble */
for (widx = startnibble; widx < 16 && samplecount > 0; widx++)
{
/* W0: the first 32-bit contains 16 x 2-bit nibbles for each word */
nibble = EXTRACTBITRANGE (frame[0], (30 - (2 * widx)), 2);
word = (union dword *)&frame[widx];
diffcount = 0;
switch (nibble)
{
case 0: /* 00: Special flag, no differences */
if (decodedebug)
ms_log (1, " W%02d: 00=special\n", widx);
break;
case 1: /* 01: Four 1-byte differences */
diffcount = 4;
if (decodedebug)
ms_log (1, " W%02d: 01=4x8b %d %d %d %d\n",
widx, word->d8[0], word->d8[1], word->d8[2], word->d8[3]);
break;
case 2: /* 10: Two 2-byte differences */
diffcount = 2;
if (swapflag)
{
ms_gswap2a (&word->d16[0]);
ms_gswap2a (&word->d16[1]);
}
if (decodedebug)
ms_log (1, " W%02d: 10=2x16b %d %d\n", widx, word->d16[0], word->d16[1]);
break;
case 3: /* 11: One 4-byte difference */
diffcount = 1;
if (swapflag)
ms_gswap4a (&word->d32);
if (decodedebug)
ms_log (1, " W%02d: 11=1x32b %d\n", widx, word->d32);
break;
} /* Done with decoding 32-bit word based on nibble */
/* Apply accumulated differences to calculate output samples */
if (diffcount > 0)
{
for (idx = 0; idx < diffcount && samplecount > 0; idx++, outputptr++)
{
if (outputptr == output) /* Ignore first difference, instead store X0 */
*outputptr = X0;
else if (diffcount == 4) /* Otherwise store difference from previous sample */
*outputptr = *(outputptr - 1) + word->d8[idx];
else if (diffcount == 2)
*outputptr = *(outputptr - 1) + word->d16[idx];
else if (diffcount == 1)
*outputptr = *(outputptr - 1) + word->d32;
samplecount--;
}
}
} /* Done looping over nibbles and 32-bit words */
} /* Done looping over frames */
/* Check data integrity by comparing last sample to Xn (reverse integration constant) */
if (outputptr != output && *(outputptr - 1) != Xn)
{
ms_log (1, "%s: Warning: Data integrity check for Steim1 failed, Last sample=%d, Xn=%d\n",
srcname, *(outputptr - 1), Xn);
}
return (outputptr - output);
} /* End of msr_decode_steim1() */
/***************************************************************************
* parameter_proc:
*
* Process the command line parameters.
*
* Returns 0 on success, and -1 on failure
***************************************************************************/
static int
parameter_proc (int argcount, char **argvec)
{
int optind;
/* Process all command line arguments */
for (optind = 1; optind < argcount; optind++)
{
if (strcmp (argvec[optind], "-V") == 0)
{
ms_log (1, "%s version: %s\n", PACKAGE, VERSION);
exit (0);
}
else if (strcmp (argvec[optind], "-h") == 0)
{
usage();
exit (0);
}
else if (strncmp (argvec[optind], "-v", 2) == 0)
{
verbose += strspn (&argvec[optind][1], "v");
}
else if (strncmp (argvec[optind], "-p", 2) == 0)
{
ppackets += strspn (&argvec[optind][1], "p");
}
else if (strcmp (argvec[optind], "-a") == 0)
{
reclen = -1;
}
else if (strcmp (argvec[optind], "-i") == 0)
{
tracepack = 0;
}
else if (strcmp (argvec[optind], "-t") == 0)
{
tracepack = 2;
}
else if (strcmp (argvec[optind], "-r") == 0)
{
reclen = strtol (argvec[++optind], NULL, 10);
}
else if (strcmp (argvec[optind], "-e") == 0)
{
encodingstr = argvec[++optind];
}
else if (strcmp (argvec[optind], "-R") == 0)
{
packreclen = strtol (argvec[++optind], NULL, 10);
}
else if (strcmp (argvec[optind], "-E") == 0)
{
packencoding = strtol (argvec[++optind], NULL, 10);
}
else if (strcmp (argvec[optind], "-b") == 0)
{
byteorder = strtol (argvec[++optind], NULL, 10);
}
else if (strcmp (argvec[optind], "-o") == 0)
{
if ( (outfile = fopen(argvec[++optind], "wb")) == NULL )
{
ms_log (2, "Error opening output file: %s\n",
argvec[++optind]);
exit (0);
}
}
else if (strncmp (argvec[optind], "-", 1) == 0 &&
strlen (argvec[optind]) > 1 )
{
ms_log (2, "Unknown option: %s\n", argvec[optind]);
exit (1);
}
else if ( ! inputfile )
{
inputfile = argvec[optind];
}
else
{
ms_log (2, "Unknown option: %s\n", argvec[optind]);
exit (1);
}
}
/* Make sure an inputfile was specified */
if ( ! inputfile )
{
ms_log (2, "No input file was specified\n\n");
ms_log (1, "%s version %s\n\n", PACKAGE, VERSION);
ms_log (1, "Try %s -h for usage\n", PACKAGE);
exit (1);
}
/* Make sure an outputfile was specified */
if ( ! outfile )
{
ms_log (2, "No output file was specified\n\n");
ms_log (1, "Try %s -h for usage\n", PACKAGE);
exit (1);
}
/* Report the program version */
if ( verbose )
ms_log (1, "%s version: %s\n", PACKAGE, VERSION);
return 0;
} /* End of parameter_proc() */
/********************************************************************
* ms_detect:
*
* Determine SEED data record length with the following steps:
*
* 1) determine that the buffer contains a SEED data record by
* verifying known signatures (fields with known limited values)
*
* 2) search the record up to recbuflen bytes for a 1000 blockette.
*
* 3) If no blockette 1000 is found search at 256-byte offsets for the
* fixed section of the next header or blank/noise record, thereby
* implying the record length.
*
* Returns:
* -1 : data record not detected or error
* 0 : data record detected but could not determine length
* >0 : size of the record in bytes
*********************************************************************/
int
ms_detect ( const char *record, int recbuflen )
{
uint16_t blkt_offset; /* Byte offset for next blockette */
uint8_t swapflag = 0; /* Byte swapping flag */
uint8_t foundlen = 0; /* Found record length */
int32_t reclen = -1; /* Size of record in bytes */
uint16_t blkt_type;
uint16_t next_blkt;
struct fsdh_s *fsdh;
struct blkt_1000_s *blkt_1000;
const char *nextfsdh;
/* Buffer must be at least 48 bytes (the fixed section) */
if ( recbuflen < 48 )
return -1;
/* Check for valid fixed section of header */
if ( ! MS_ISVALIDHEADER(record) )
return -1;
fsdh = (struct fsdh_s *) record;
/* Check to see if byte swapping is needed by checking for sane year */
if ( (fsdh->start_time.year < 1900) ||
(fsdh->start_time.year > 2050) )
swapflag = 1;
blkt_offset = fsdh->blockette_offset;
/* Swap order of blkt_offset if needed */
if ( swapflag ) ms_gswap2 (&blkt_offset);
/* Loop through blockettes as long as number is non-zero and viable */
while ( blkt_offset != 0 &&
blkt_offset <= recbuflen )
{
memcpy (&blkt_type, record + blkt_offset, 2);
memcpy (&next_blkt, record + blkt_offset + 2, 2);
if ( swapflag )
{
ms_gswap2 (&blkt_type);
ms_gswap2 (&next_blkt);
}
/* Found a 1000 blockette, not truncated */
if ( blkt_type == 1000 &&
(int)(blkt_offset + 4 + sizeof(struct blkt_1000_s)) <= recbuflen )
{
blkt_1000 = (struct blkt_1000_s *) (record + blkt_offset + 4);
foundlen = 1;
/* Calculate record size in bytes as 2^(blkt_1000->reclen) */
reclen = (unsigned int) 1 << blkt_1000->reclen;
break;
}
/* Saftey check for invalid offset */
if ( next_blkt != 0 && next_blkt < blkt_offset )
{
ms_log (2, "Invalid blockette offset (%d) less than current offset (%d)\n",
next_blkt, blkt_offset);
return -1;
}
blkt_offset = next_blkt;
}
/* If record length was not determined by a 1000 blockette scan the buffer
* and search for the next record */
if ( reclen == -1 )
{
nextfsdh = record + 256;
/* Check for record header or blank/noise record at 256 byte offsets */
while ( ((nextfsdh - record) + 48) < recbuflen )
{
if ( MS_ISVALIDHEADER(nextfsdh) || MS_ISVALIDBLANK(nextfsdh) )
{
foundlen = 1;
reclen = nextfsdh - record;
break;
}
nextfsdh += 256;
}
}
if ( ! foundlen )
return 0;
else
return reclen;
} /* End of ms_detect() */