void InstrumentWindowPickTab::updatePlot(int detid)
{
if (m_instrWindow->blocked())
{
m_plot->clearCurve();
return;
}
if (m_plotPanel->isCollapsed()) return;
InstrumentActor* instrActor = m_instrWindow->getInstrumentActor();
Mantid::API::MatrixWorkspace_const_sptr ws = instrActor->getWorkspace();
if (detid >= 0)
{
if (m_one->isChecked() || m_peak->isChecked())
{// plot spectrum of a single detector
plotSingle(detid);
}
else if (m_tube->isChecked())
{// plot integrals
plotTube(detid);
}
}
else
{
m_plot->clearCurve();
}
m_plot->recalcAxisDivs();
m_plot->replot();
}
/**
* Update the miniplot for a selected detector.
* @param detid :: ID of detector to use to update the plot.
*/
void InstrumentWindowPickTab::updatePlot(int detid)
{
if (m_instrWindow->blocked())
{
m_plot->clearCurve();
return;
}
if (m_plotPanel->isCollapsed()) return;
if (detid >= 0)
{
if (m_one->isChecked() || m_peak->isChecked())
{ // plot spectrum of a single detector
plotSingle(detid);
}
else if (m_tube->isChecked())
{ // plot integrals
plotTube(detid);
}
}
else
{
m_plot->clearCurve();
}
m_plot->recalcAxisDivs();
m_plot->replot();
}
// processSingle - finish up including a single spectrum
void SpectraSTReplicates::processSingle(SpectraSTLibEntry* single, bool isRaw) {
if (m_numUsed == 1) {
single->setOneComment("Spec", "Single");
}
single->setStatus("Normal"); // reset
string dummy("");
if (!isRaw && !(single->getOneComment("Probcorr", dummy))) {
// enforce the peak quorum -- for this only entry (note that this is necessary
// in the case where the entry is previously created with a lower quorum)
// hack - don't do this for NIST spectra, which have this Probcorr field, since the
// quorum specification has different format
int minNumRepWithPeak = (int)((double)m_numUsed * m_params.peakQuorum - 0.00001) + 1;
if (minNumRepWithPeak < 1) minNumRepWithPeak = 1;
single->getPeakList()->removeInquoratePeaks(minNumRepWithPeak);
}
if (isRaw && m_denoiser && m_denoiser->isFilterReady()) {
m_denoiser->filter(single->getPeakList(), m_params.maximumNumPeaksKept, m_params.denoiserMinimumSignalProb);
}
if (m_params.maximumNumPeaksKept > 0) {
double retained = 1.0;
retained = single->getPeakList()->simplify(m_params.maximumNumPeaksKept, 99999.0);
}
single->annotatePeaks();
// single->getPeakList()->flattenAllPeaks();
// single->getPeakList()->removeNoncanonicalPeaks();
string specType("");
if (m_params.plotSpectra == "ALL" || m_params.plotSpectra == single->getStatus() ||
(single->getOneComment("Spec", specType) && !m_params.plotSpectra.empty() && m_params.plotSpectra == specType)) {
plotSingle(single);
}
}
