예제 #1
0
void Rec(TString file="raw.root")
{
  // Reconstruction of RAW data from the input file raw.root
  // Boris Polichtchouk, 13 Mar 2008

  //AliCDBManager::Instance()->SetDefaultStorage("local://$ALICE_ROOT/OCDB");
  //AliCDBManager::Instance()->SetSpecificStorage("PHOS/*","local://BadMap");

  AliReconstruction rec ;
  rec.SetRunTracking("") ;
  rec.SetRunVertexFinder(kFALSE) ; 
  rec.SetRunLocalReconstruction("PHOS") ;
  rec.SetFillESD("PHOS") ;

  //Set rec. parameters different from the default ones.
  AliPHOSRecoParam* recEmc = new AliPHOSRecoParamEmc();
  recEmc->SetSubtractPedestals(kTRUE);
  recEmc->SetMinE(0.01);                     //Minimal Digit energy
  recEmc->SetClusteringThreshold(0.02);      //Minimal cluster seed energy
  recEmc->SetDecoderVersion("v1");           //Comment out to choose Max-Ped version
  recEmc->SetOldRCUFormat(kTRUE);

  AliPHOSReconstructor::SetRecoParamEmc(recEmc);

  rec.SetInput(file.Data());  // read RAW data
  rec.SetNumberOfEventsPerFile(5000);	
  rec.Run();


}
예제 #2
0
파일: rec.C 프로젝트: JanFSchulte/monalisa
void rec() {

  AliReconstruction MuonRec;

  MuonRec.SetInput("raw.root");
  MuonRec.SetRunLocalReconstruction("MUON ITS VZERO");
  MuonRec.SetRunTracking("MUON ITS VZERO");
  MuonRec.SetRunVertexFinder(kTRUE);
  MuonRec.SetFillESD("MUON VZERO HLT");
  MuonRec.SetRunQA("MUON:ALL");
  
  MuonRec.SetDefaultStorage("alien://Folder=/alice/simulation/2008/v4-15-Release/Ideal/");

  // QA reference
  MuonRec.SetQARefDefaultStorage("local://$ALICE_ROOT/QAref") ;

  // HLT
  MuonRec.SetSpecificStorage("HLT/ConfigMUON/DecisionComponent","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb");
  MuonRec.SetSpecificStorage("HLT/ConfigMUON/HitReconstructor","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb");
  MuonRec.SetSpecificStorage("HLT/ConfigMUON/MansoTrackerFSM","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb");
  MuonRec.SetSpecificStorage("HLT/ConfigMUON/TriggerReconstructor","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb");
  
  // CTP
  MuonRec.SetSpecificStorage("GRP/CTP/Config","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb");
  
  // tracker masks
  MuonRec.SetSpecificStorage("MUON/Calib/Gains","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb/rec");
  MuonRec.SetSpecificStorage("MUON/Calib/Pedestals","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb/rec");

  // reconstruction parameters
  AliMUONRecoParam *muonRecoParam = AliMUONRecoParam::GetLowFluxParam();
  muonRecoParam->SaveFullClusterInESD(kTRUE,100.);
  for (Int_t i = 0; i < 10; i++) {
    muonRecoParam->SetDefaultNonBendingReso(i, 0.1524);
    muonRecoParam->SetDefaultBendingReso(i, 0.05099);
  }
  //muonRecoParam->Print("FULL");
  MuonRec.SetRecoParam("MUON",muonRecoParam);

  MuonRec.SetNumberOfEventsPerFile(500);

  TStopwatch timer;
  timer.Start();
  MuonRec.Run();
  timer.Stop();
  timer.Print();
  
}
예제 #3
0
파일: rec.C 프로젝트: JanFSchulte/monalisa
void rec() {

  AliReconstruction MuonRec;

  MuonRec.SetInput("raw.root");
  MuonRec.SetRunLocalReconstruction("MUON ITS VZERO");
  MuonRec.SetRunTracking("MUON ITS VZERO");
  MuonRec.SetRunVertexFinder(kTRUE);
  MuonRec.SetFillESD("MUON VZERO HLT");
  MuonRec.SetRunQA("MUON:ALL");
  
  MuonRec.SetDefaultStorage("alien://Folder=/alice/simulation/2008/v4-15-Release/Ideal/");

  // QA reference
  MuonRec.SetQARefDefaultStorage("local://$ALICE_ROOT/QAref") ;

  // GRP
  MuonRec.SetSpecificStorage("GRP/GRP/Data",Form("local://%s",gSystem->pwd()));
  
  // HLT
  MuonRec.SetSpecificStorage("HLT/ConfigMUON/DecisionComponent","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb");
  MuonRec.SetSpecificStorage("HLT/ConfigMUON/HitReconstructor","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb");
  MuonRec.SetSpecificStorage("HLT/ConfigMUON/MansoTrackerFSM","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb");
  MuonRec.SetSpecificStorage("HLT/ConfigMUON/TriggerReconstructor","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb");
  
  // CTP
  MuonRec.SetSpecificStorage("GRP/CTP/Config","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb");
  
  // alignment
  MuonRec.SetSpecificStorage("MUON/Align/Data","alien://Folder=/alice/cern.ch/user/b/bogdan/prod2009/cdb/ideal");
  
  // reconstruction parameters
  AliMUONRecoParam *muonRecoParam = AliMUONRecoParam::GetLowFluxParam();
  muonRecoParam->SaveFullClusterInESD(kTRUE,100.);
  //muonRecoParam->Print("FULL");
  MuonRec.SetRecoParam("MUON",muonRecoParam);

  MuonRec.SetNumberOfEventsPerFile(500);

  TStopwatch timer;
  timer.Start();
  MuonRec.Run();
  timer.Stop();
  timer.Print();
  
}
예제 #4
0
파일: recTPC.C 프로젝트: alisw/AliRoot
void recTracking(Int_t type, const char *filename="data.root")
{
  /// Set path to calibration data

  AliCDBManager * man = AliCDBManager::Instance();
  man->SetDefaultStorage("local://$ALICE_ROOT/OCDB");
  man->SetRun(0);
  man->SetSpecificStorage("TPC/*/*","local:///afs/cern.ch/user/m/mivanov/public/Calib");
  //
  // Set reconstruction parameters
  //
  AliLog::SetClassDebugLevel("AliTPCclusterer",2);

  AliTPCRecoParam * tpcRecoParam = 0;
  if (type==0)  tpcRecoParam = AliTPCRecoParam::GetCosmicTestParam(kTRUE);
  if (type>0)  tpcRecoParam = AliTPCRecoParam::GetLaserTestParam(kTRUE);

  AliTPCReconstructor::SetRecoParam(tpcRecoParam);
  AliTPCReconstructor::SetStreamLevel(1);

  //
  //
  //
  AliReconstruction rec;
  rec.SetSpecificStorage("TPC/*/*","local:///afs/cern.ch/user/m/mivanov/public/Calib");
  rec.SetLoadAlignData("");
  rec.SetWriteESDfriend(kTRUE);
  rec.SetInput(filename);
  rec.SetEquipmentIdMap("EquipmentIdMap.data");
  //rec.SetRunReconstruction("TPC");
  rec.SetOption("TPC","PedestalSubtraction");
  rec.SetRunLocalReconstruction("");
  rec.SetRunTracking("TPC");
  rec.SetFillESD("TPC");
  rec.SetFillTriggerESD(kFALSE);
  rec.SetRunVertexFinder(kFALSE);
  rec.SetWriteAlignmentData(kTRUE);
  rec.Run(0);
}
예제 #5
0
void histogramHandlerTest(const char* input="./"){
  
  if (!input) {
    cerr << "please specify input or run without arguments" << endl;
    return;
  }
  
  
  /////////////////////////////////////////////////////////////////////////////////////////////////
  // 
  // init the HLT system in order to define the analysis chain below
  //
  AliHLTSystem* gHLT=AliHLTPluginBase::GetInstance();

  ///////////////////////////////////////////////////////////////////////////////////////////////////
  //
  // define the analysis chain to be run
  //
    
  int iMinSlice=0; 
  int iMaxSlice=35;
  int iMinPart=0;
  int iMaxPart=5;

  TString histogramHandlerInput1;
  TString histogramHandlerInput2;
  TString histogramHandlerOutput1;
  TString histogramHandlerOutput2;
  TString rootFileWriterInput1;
  TString rootFileWriterInput2;

  for (int slice=iMinSlice; slice<=iMaxSlice; slice++) {
    for (int part=iMinPart; part<=iMaxPart; part++) {
      TString clusterFinderOutput1;
      TString clusterFinderOutput2;
      TString clusterHistoInput1;
      TString clusterHistoInput2;
      TString clusterHistoOutput1;
      TString clusterHistoOutput2;
      TString arg, publisher;
      // digit publisher components
      int ddlno=768;
      if (part>1) ddlno+=72+4*slice+(part-2);
      else ddlno+=2*slice+part;
      arg.Form("-minid %d -datatype 'DDL_RAW ' 'TPC '  -dataspec 0x%02x%02x%02x%02x", ddlno, slice, slice, part, part);

      publisher.Form("DP_%02d_%d", slice, part);
      AliHLTConfiguration pubconf(publisher.Data(), "AliRawReaderPublisher", NULL , arg.Data());

      // first clusterfinder
      clusterFinderOutput1.Form("CF1_%02d_%d", slice, part);
      AliHLTConfiguration cfconf(clusterFinderOutput1.Data(), "TPCClusterFinderDecoder", publisher.Data(), "-timebins 446");//-timebins set to simulated data
      if (clusterHistoInput1.Length()>0) clusterHistoInput1+=" ";
      clusterHistoInput1+=clusterFinderOutput1;

      // second clusterfinder
      clusterFinderOutput2.Form("CF2_%02d_%d", slice, part);
      AliHLTConfiguration cfconf(clusterFinderOutput2.Data(), "TPCClusterFinderDecoder", publisher.Data(), "-timebins 446");//-timebins set to simulated data
      if (clusterHistoInput2.Length()>0) clusterHistoInput2+=" ";
      clusterHistoInput2+=clusterFinderOutput2;
    

      // first cluster histo component
      clusterHistoOutput1.Form("CH1_%02d_%d", slice, part);
      AliHLTConfiguration cfconf(clusterHistoOutput1.Data(), "TPCClusterHisto", clusterHistoInput1.Data(), "");
      if (histogramHandlerInput1.Length()>0) histogramHandlerInput1+=" ";
      histogramHandlerInput1+=clusterHistoOutput1;

      //second cluster histo component
      clusterHistoOutput2.Form("CH2_%02d_%d", slice, part);
      AliHLTConfiguration cfconf(clusterHistoOutput2.Data(), "TPCClusterHisto", clusterHistoInput2.Data(), "");
      if (histogramHandlerInput1.Length()>0) histogramHandlerInput1+=" ";
      histogramHandlerInput1+=clusterHistoOutput2;
      if (histogramHandlerInput2.Length()>0) histogramHandlerInput2+=" ";
      histogramHandlerInput2+=clusterHistoOutput2;

    }
  }
  
  // first histogram handler component
  histogramHandlerOutput1.Form("HH1_%02d_%d", slice, part);
  AliHLTConfiguration cfconf(histogramHandlerOutput1.Data(), "TPCHistogramHandler", histogramHandlerInput1.Data(), "-use-general");
  if (rootFileWriterInput1.Length()>0) rootFileWriterInput1+=" ";
  rootFileWriterInput1+=histogramHandlerOutput1;
  
  // second histogram handler component
  histogramHandlerOutput2.Form("HH2_%02d_%d", slice, part);
  AliHLTConfiguration cfconf(histogramHandlerOutput2.Data(), "TPCHistogramHandler", histogramHandlerInput2.Data(), "-use-general");
  if (rootFileWriterInput2.Length()>0) rootFileWriterInput2+=" ";
  rootFileWriterInput2+=histogramHandlerOutput2;
  
  AliHLTConfiguration rootFileWriter1("RootFileWriter1", "ROOTFileWriter", rootFileWriterInput1.Data() , "-datafile histogramHandlerFile1");

  AliHLTConfiguration rootFileWriter2("RootFileWriter2", "ROOTFileWriter", rootFileWriterInput2.Data() , "-datafile histogramHandlerFile2");


  ///////////////////////////////////////////////////////////////////////////////////////////////////
  //
  // Init and run the reconstruction
  // All but HLT reconstruction is switched off
  //
  AliReconstruction rec;
  rec.SetInput(input);
  rec.SetRunVertexFinder(kFALSE);
  rec.SetRunLocalReconstruction("HLT");
  rec.SetRunTracking("");
  rec.SetLoadAlignFromCDB(0);
  rec.SetRunQA(":");
  //rec.SetFillESD("HLT");
  rec.SetFillESD("");
  rec.SetFillTriggerESD(false);
  rec.SetOption("HLT", "libAliHLTUtil.so libAliHLTRCU.so libAliHLTTPC.so loglevel=0x7c chains=RootFileWriter1,RootFileWriter2");
  rec.Run();
}
예제 #6
0
void recCPass0(const char *filename="raw.root",Int_t nevents=-1, const char *ocdb="raw://", const char* options="?Trigger=kCalibBarrel")
{

  if (gSystem->Getenv("ALIROOT_FORCE_COREDUMP"))
  {
    printf("ALIROOT_FORCE_COREDUMP set\n");
    gSystem->ResetSignal(kSigFloatingException);
    gSystem->ResetSignal(kSigSegmentationViolation);
  }
  // addopt errors to account for calibration imprefection before cpass0
  // 1) For TPC
  Double_t tpcSystematicErrors[5]={1,1.5,1./100.,1./100.,0.1};
  Double_t tpcSystematicErrorClusters[2]={1.5,1.5};
  Double_t tpcExtendedRoads[2]={2.5,2.5};
  Double_t tpcPrimDCACuts[2] = {10.,30.}; // Y,Z
  TVectorD *vectpcSystematicErrors=new TVectorD(5, tpcSystematicErrors);
  TVectorD *vectpcSystematicErrorClusters=new TVectorD(2, tpcSystematicErrorClusters);
  TVectorD *vectpcExtendedRoads= new TVectorD(2, tpcExtendedRoads);
  TVectorD *vectpcPrimDCACuts = new TVectorD(2, tpcPrimDCACuts);
  const double kZOutSectorCut = 3.; // cut on clusters on wrong side of CE (added to extendedRoadZ)
  const double kPrimaryZ2XCut = 1.2; // cut on clusters Z/X (large eta)
  AliTPCReconstructor::SetSystematicError(vectpcSystematicErrors);
  AliTPCReconstructor::SetSystematicErrorCluster(vectpcSystematicErrorClusters);
  AliTPCReconstructor::SetExtendedRoads(vectpcExtendedRoads);
  AliTPCReconstructor::SetPrimaryDCACut(vectpcPrimDCACuts);
  AliTPCReconstructor::SetZOutSectorCut(kZOutSectorCut);
  AliTPCReconstructor::SetPrimaryZ2XCut(kPrimaryZ2XCut);
  //
  if (gSystem->Getenv("streamLevel")){
    SetStreamLevel( AliTPCtracker::kStreamErrParam| AliTPCtracker::kStreamTransform);
  }
  // 2) For ITS
  AliITSReconstructor::SetCheckInvariant(kFALSE); // no invariant check with extended TPC errors
  // 3) For TOF
  // extra tolerance on top of default from recoparam
  AliTOFReconstructor::SetExtraTolerance(5.0);
  // 4) For TRD
  AliTRDReconstructor::SetExtraMaxClPerLayer(3); // to allow >6 cluster candidates per layer
  AliTRDReconstructor::SetExtraBoundaryTolerance(3); // relax boundary check
  AliTRDReconstructor::SetExtraRoadY(4); // extra road in Y
  AliTRDReconstructor::SetExtraRoadZ(6); // extra road in Z
  AliTRDReconstructor::SetExtraChi2Out(25); // extra chi2 tolerance on backpropagation
  //
  // Load some system libs for Grid and monitoring
  // Set the CDB storage location
  AliCDBManager * man = AliCDBManager::Instance();
  man->SetDefaultStorage(ocdb);
  // Reconstruction settings
  AliReconstruction rec;
  //
  // do we extract the TPC recpoints in advance
  Int_t preclustTPC = TString(gSystem->Getenv("preclusterizeTPC")).Atoi();
  Bool_t noTPCLocalRec = preclustTPC==1;
  if (noTPCLocalRec) printf("preclustTPC = %d: TPC local reconstruction assumed to be already done\n", preclustTPC);
  else printf("preclustTPC = %d: TPC local reconstruction assumed to NOT be already done\n", preclustTPC);
  //
  if (gSystem->Getenv("disableOuter")!=NULL){
    TString disOuter = gSystem->Getenv("disableOuter");
    TString disOuterLoc = disOuter;
    if (noTPCLocalRec) {
      disOuterLoc.ReplaceAll("TPC","");
      disOuterLoc.ReplaceAll("HLT","");
    }
    rec.SetRunReconstruction(disOuter.Data());
    rec.SetRunLocalReconstruction(disOuterLoc.Data());
  } 
  else if (noTPCLocalRec) {
    rec.SetRunReconstruction("ALL -HLT");
    rec.SetRunLocalReconstruction("ALL -TPC -HLT");
  }
  else {
    rec.SetRunLocalReconstruction("ALL");
  }

  // Upload CDB entries from the snapshot (local root file) if snapshot exist
  if (gSystem->AccessPathName("OCDB.root", kFileExists)==0) {        
    rec.SetDefaultStorage("local://");
    rec.SetCDBSnapshotMode("OCDB.root");
  }
  else {
    // setup ocdb by custom (if any) or default settings
    if (gSystem->AccessPathName("localOCDBaccessConfig.C", kFileExists)==0) {        
      gROOT->LoadMacro("localOCDBaccessConfig.C");
      localOCDBaccessConfig();
    }else { // default settings
      AliCDBManager* man = AliCDBManager::Instance();
      man->SetRaw(kTRUE);
    }
    TString cdbMode = gSystem->Getenv("OCDB_SNAPSHOT_CREATE");
    if (cdbMode == "kTRUE") {
      gROOT->LoadMacro("$ALIDPG_ROOT/MC/CreateSnapshot.C");
      CreateSnapshot("OCDB.root",filename);
      return;
    }
  }

  // All friends
  rec.SetFractionFriends(2.0);

 // AliReconstruction settings - hardwired MB trigger for calibration

  TString newfilename = filename;
  newfilename += options;
  rec.SetInput(newfilename.Data());

  // Set protection against too many events in a chunk (should not happen)
  if (nevents>0) rec.SetEventRange(0,nevents);

  // Remove recpoints after each event
  TString delRecPoints="TPC TRD ITS";
  if (noTPCLocalRec) delRecPoints.ReplaceAll("TPC","");
  rec.SetDeleteRecPoints(delRecPoints.Data()); 
  //


  // Switch off the V0 finder - saves time!
  //  rec.SetRunMultFinder(kFALSE);
  rec.SetRunV0Finder(kFALSE); 

  //
  // QA options - all QA is off
  //
  rec.SetRunQA(":");
  rec.SetRunGlobalQA(kFALSE);

  // AliReconstruction settings
  rec.SetWriteESDfriend(kTRUE);
  rec.SetWriteAlignmentData();
  rec.SetUseTrackingErrorsForAlignment("ITS");
  rec.SetCleanESD(kFALSE);

  // ITS options (see ALIROOT-7179)
  float itsErrY2[6]={0., 0., 0.1*0.1, 0.1*.1, 0.,0.};
  TVectorF *vecITSErrY2 = new TVectorF(6, itsErrY2);
  AliITSReconstructor::SetExtraErrorY2(vecITSErrY2);
  
  //Ignore SetStopOnError
  rec.SetStopOnError(kFALSE);

  AliLog::Flush();
  rec.Run();
}
예제 #7
0
파일: rec.C 프로젝트: preghenella/AliDPG
void rec(const char *filename="raw.root", const char* options="")
{
  /////////////////////////////////////////////////////////////////////////////////////////
  //
  // Reconstruction script for RAW data
  //
  /////////////////////////////////////////////////////////////////////////////////////////

  
  AliReconstruction rec;
  // Set reconstruction flags (skip detectors here if neded with -<detector name>

  // do we extract the TPC recpoints in advance
  Int_t preclustTPC = TString(gSystem->Getenv("preclusterizeTPC")).Atoi();
  Bool_t noTPCLocalRec = preclustTPC==1;
  if (noTPCLocalRec) printf("preclustTPC = %d: TPC local reconstruction assumed to be already done\n", preclustTPC);
  else printf("preclustTPC = %d: TPC local reconstruction assumed to NOT be already done\n", preclustTPC);
  //
  if (noTPCLocalRec) {
    rec.SetRunReconstruction("ALL -HLT");
    rec.SetRunLocalReconstruction("ALL -TPC -HLT");
  }
  else {
    rec.SetRunLocalReconstruction("ALL");
  } 

  // Upload CDB entries from the snapshot (local root file) if snapshot exist
  if (gSystem->AccessPathName("OCDB.root", kFileExists)==0) {        
    rec.SetDefaultStorage("local://");
    rec.SetCDBSnapshotMode("OCDB.root");
  }
  else {
    // setup ocdb by custom (if any) or default settings
    if (gSystem->AccessPathName("OCDBconfig.C", kFileExists)==0) {
      gROOT->Macro("OCDBconfig.C");
    }
    else { // default settings
      AliCDBManager* man = AliCDBManager::Instance();
      man->SetRaw(kTRUE);
    }
    //
    TString cdbMode = gSystem->Getenv("OCDB_SNAPSHOT_CREATE");
    if (cdbMode == "kTRUE") {
      gROOT->LoadMacro("$ALIDPG_ROOT/MC/CreateSnapshot.C");
      CreateSnapshot("OCDB.root",filename);
      return;
    }
  }



  // removing apparently pile-up clusters to speadup reconstruction
  const double kZOutSectorCut = 3.; // cut on clusters on wrong side of CE (added to extendedRoadZ)
  AliTPCReconstructor::SetZOutSectorCut(kZOutSectorCut);


  // QA options
  //  rec.SetRunQA("Global:ESDs") ;
  //  rec.SetRunQA(":") ;
  //  rec.SetRunQA("ALL:ALL") ;
  rec.SetRunQA("Global MUON:ALL") ;
  rec.SetQARefDefaultStorage("local://$ALICE_ROOT/QAref") ;

  // AD stuff (see ALIROOT-6663)

  // rec.SetOption("AD", "+SaturationCorrection"); // --> not needed anymore, see https://alice.its.cern.ch/jira/browse/ALIROOT-6778

  // AliReconstruction settings
  rec.SetWriteESDfriend(kTRUE);
  rec.SetWriteAlignmentData();
  TString filenamewithopt = filename;
  filenamewithopt += options;
  rec.SetInput(filenamewithopt.Data());
  rec.SetUseTrackingErrorsForAlignment("ITS");

  // Specific AD storage, see https://alice.its.cern.ch/jira/browse/ALIROOT-6056
  //  rec.SetSpecificStorage("AD/Calib/TimeSlewing", "alien://Folder=/alice/simulation/2008/v4-15-Release/Ideal");

  // switch off cleanESD
  rec.SetCleanESD(kFALSE);

  //Ignore SetStopOnError
  rec.SetStopOnError(kFALSE);

  // Delete recpoints
  // Remove recpoints after each event
  TString delRecPoints="TPC TRD";
  if (noTPCLocalRec) delRecPoints.ReplaceAll("TPC","");
  rec.SetDeleteRecPoints(delRecPoints.Data()); 
  //

  // Set 0.7% as fraction of friends (Ruben, 2017-08-22)
  rec.SetFractionFriends(0.007);

  AliLog::Flush();
  rec.Run();

}
예제 #8
0
/**
 * @file cal-hlt-tpc-offline.C
 * @brief Test macro for the HLT TPC offline calibration.
 *
 * The macro runs an HLT chain of TPC analysis, using the offline
 * algorithms and appropriate wrappers. The final output is
 * processed by the TPCOfflineCalibration component.
 *
 * Usage:
 * <pre>
 *   aliroot -b -q cal-hlt-tpc-offline.C | tee cal-hlt-tpc-offline.log
 * </pre>
 *
 * The chain to be run is defined by the macro given to the parameter
 * 'config='
 *
 * The macro asumes raw data to be available in the rawx folders, either
 * simulated or real data. A different input can be specified as parameter
 * <pre>
 *   aliroot -b -q cal-hlt-tpc-offline.C'("input.root")'
 * </pre>
 *
 * In the first section, an analysis chain is defined. The scale of the
 * chain can be defined by choosing the range of sectors and partitions.
 *
 * The reconstruction is steered by the AliReconstruction object in the
 * usual way.
 *
 * @ingroup alihlt_tpc
 * @author Jacek Otwinowski <*****@*****.**>, [email protected]
 */
void cal_hlt_tpc_offline(const char* input="./")
{
  if (!input) {
    cerr << "please specify input or run without arguments" << endl;
    return;
  }

  ///////////////////////////////////////////////////////////////////////////////////////////////////
  //
  // init the HLT system in order to define the analysis chain below
  //
  AliHLTSystem* gHLT=AliHLTPluginBase::GetInstance();

  //gHLT.SwitchAliLog(0);

  ///////////////////////////////////////////////////////////////////////////////////////////////////
  //
  // define the analysis chain to be run
  //

  bool sectorClusterer=true; // run clusterer on sector or DDL level
  // check if the AliRawReaderMemory supports multiple buffers
  TClass* info=TClass::GetClass("AliRawReaderMemory");
  TList* methods=info->GetListOfAllPublicMethods();
  if (sectorClusterer && !methods->FindObject("AddBuffer")) {
    cerr << "warning: AliRawReaderMemory does not support multiple buffers, falling back to run clusterer on DDL level" << endl;
    sectorClusterer=false;
  }
 
  int iMinSlice=0;
  int iMaxSlice=35;
  int iMinPart=0;
  int iMaxPart=5;

  int DDLNoFromSlicePatch(int, int);

  TString writerInput;
  TString trackerInput;
  TString calibratorInput;

  for (int slice=iMinSlice; slice<=iMaxSlice; slice++) {
    TString arg, clustererInput;
    for (int part=iMinPart; part<=iMaxPart; part++) {
      TString publisher, cf;

      // raw data publisher components
      int ddlno=DDLNoFromSlicePatch(slice, part);
      arg.Form("-minid %d -datatype 'DDL_RAW ' 'TPC '  -dataspec 0x%02x%02x%02x%02x -verbose", ddlno, slice, slice, part, part);
      publisher.Form("DP_%02d_%d", slice, part);
      AliHLTConfiguration pubconf(publisher.Data(), "AliRawReaderPublisher", NULL , arg.Data());

      if (!sectorClusterer) {
      // cluster finder components
      cf.Form("CF_%02d_%d", slice, part);
      AliHLTConfiguration cfconf(cf.Data(), "TPCOfflineClusterer", publisher.Data(), "");

      if (trackerInput.Length()>0) trackerInput+=" ";
      trackerInput+=cf;
      //if (writerInput.Length()>0) writerInput+=" ";
      //writerInput+=cf;
      } else {
	if (clustererInput.Length()>0) clustererInput+=" ";
	clustererInput+=publisher;
      }
    }
    if (sectorClusterer) {
      // cluster finder components
      cf.Form("CF_%02d", slice);
      AliHLTConfiguration cfconf(cf.Data(), "TPCOfflineClusterer", clustererInput.Data(), "");

      if (trackerInput.Length()>0) trackerInput+=" ";
      trackerInput+=cf;
    }
  }

  // one global tracker component
  TString tracker;
  tracker.Form("Global_TR");
  AliHLTConfiguration trackerconf(tracker.Data(), "TPCOfflineTrackerCalib", trackerInput.Data(), "");
  if (writerInput.Length()>0) writerInput+=" ";
  calibratorInput+=tracker;

  // one global calibration component
  TString calibrator;
  calibrator.Form("Global_Calib");
  AliHLTConfiguration calibconf(calibrator.Data(), "TPCOfflineCalibration", calibratorInput.Data(), "");
  if (writerInput.Length()>0) writerInput+=" ";
  writerInput+=calibrator;

  // the writer configuration
  AliHLTConfiguration rootfwconf("sink1", "ROOTFileWriter", writerInput.Data(), "-specfmt=_%d -subdir=out_%d -idfmt=_0x%08x");
  //AliHLTConfiguration esdwconf("sink1", "EsdCollector"   , writerInput.Data(), "-directory hlt-tpc-offline");

  ///////////////////////////////////////////////////////////////////////////////////////////////////
  //
  // Init and run the reconstruction
  // All but HLT reconstructio is switched off
  //
  AliReconstruction rec;
  rec.SetInput(input);
  rec.SetRunVertexFinder(kFALSE);
  rec.SetRunLocalReconstruction("HLT");
  rec.SetRunTracking("");
  rec.SetLoadAlignFromCDB(0);
  rec.SetFillESD("");
  rec.SetRunQA(":");
  rec.SetRunGlobalQA(kFALSE);
  rec.SetFillTriggerESD(kFALSE);
  rec.SetOption("HLT", "libAliHLTUtil.so libAliHLTRCU.so libANALYSIS.so libANALYSISalice.so libTPCcalib.so libAliHLTTPC.so loglevel=0x7c chains=sink1");
  rec.Run();
}