void getOffsetAndCount(const Tag &tag, const DataArray &array, NDSize &offset, NDSize &count) {
vector<double> position = tag.position();
vector<double> extent = tag.extent();
vector<string> units = tag.units();
NDSize temp_offset(position.size());
NDSize temp_count(position.size(), 1);
if (array.dimensionCount() != position.size() || (extent.size() > 0 && extent.size() != array.dimensionCount())) {
throw std::runtime_error("Dimensionality of position or extent vector does not match dimensionality of data!");
}
for (size_t i = 0; i < position.size(); ++i) {
Dimension dim = array.getDimension(i+1);
temp_offset[i] = positionToIndex(position[i], i >= units.size() ? "none" : units[i], dim);
if (i < extent.size()) {
ndsize_t c = positionToIndex(position[i] + extent[i], i >= units.size() ? "none" : units[i], dim) - temp_offset[i];
temp_count[i] = (c > 1) ? c : 1;
}
}
offset = temp_offset;
count = temp_count;
}
void getOffsetAndCount(const MultiTag &tag, const DataArray &array, size_t index, NDSize &offsets, NDSize &counts) {
DataArray positions = tag.positions();
DataArray extents = tag.extents();
NDSize position_size, extent_size;
size_t dimension_count = array.dimensionCount();
if (positions) {
position_size = positions.dataExtent();
}
if (extents) {
extent_size = extents.dataExtent();
}
if (!positions || index >= position_size[0]) {
throw nix::OutOfBounds("Index out of bounds of positions!", 0);
}
if (extents && index >= extent_size[0]) {
throw nix::OutOfBounds("Index out of bounds of positions or extents!", 0);
}
if (position_size.size() == 1 && dimension_count != 1) {
throw nix::IncompatibleDimensions("Number of dimensions in positions does not match dimensionality of data",
"util::getOffsetAndCount");
}
if (position_size.size() > 1 && position_size[1] > dimension_count) {
throw nix::IncompatibleDimensions("Number of dimensions in positions does not match dimensionality of data",
"util::getOffsetAndCount");
}
if (extents && extent_size.size() > 1 && extent_size[1] > dimension_count) {
throw nix::IncompatibleDimensions("Number of dimensions in extents does not match dimensionality of data",
"util::getOffsetAndCount");
}
NDSize temp_offset = NDSize{static_cast<NDSize::value_type>(index), static_cast<NDSize::value_type>(0)};
NDSize temp_count{static_cast<NDSize::value_type>(1), static_cast<NDSize::value_type>(dimension_count)};
vector<double> offset;
positions.getData(offset, temp_count, temp_offset);
NDSize data_offset(dimension_count, static_cast<size_t>(0));
NDSize data_count(dimension_count, static_cast<size_t>(1));
vector<string> units = tag.units();
for (size_t i = 0; i < offset.size(); ++i) {
Dimension dimension = array.getDimension(i+1);
string unit = "none";
if (i <= units.size() && units.size() > 0) {
unit = units[i];
}
data_offset[i] = positionToIndex(offset[i], unit, dimension);
}
if (extents) {
vector<double> extent;
extents.getData(extent, temp_count, temp_offset);
for (size_t i = 0; i < extent.size(); ++i) {
Dimension dimension = array.getDimension(i+1);
string unit = "none";
if (i <= units.size() && units.size() > 0) {
unit = units[i];
}
ndsize_t c = positionToIndex(offset[i] + extent[i], unit, dimension) - data_offset[i];
data_count[i] = (c > 1) ? c : 1;
}
}
offsets = data_offset;
counts = data_count;
}