PrimerLibraryModel::PrimerLibraryModel(QObject *parent)
: QAbstractItemModel(parent)
{
U2OpStatus2Log os;
PrimerLibrary *primerLibrary = PrimerLibrary::getInstance(os);
SAFE_POINT_OP(os, );
primers = primerLibrary->getPrimers(os);
}
void ImportPrimerFromObjectTask::run() {
primer.name = sequenceObject->getGObjectName();
primer.sequence = sequenceObject->getWholeSequenceData(stateInfo);
CHECK_OP(stateInfo, );
int pos = 0;
if (validator.validate(primer.sequence, pos) == QValidator::Invalid) {
setError(tr("The primer sequence contains non-ACGT symbols"));
return;
}
PrimerLibrary *library = PrimerLibrary::getInstance(stateInfo);
CHECK_OP(stateInfo, );
library->addRawPrimer(primer, stateInfo);
}
void ImportPrimerFromObjectTask::run() {
primer.name = sequenceObject->getGObjectName();
primer.sequence = sequenceObject->getWholeSequenceData(stateInfo);
CHECK_OP(stateInfo, );
QRegExp regExp("[^ACGT]");
if (primer.sequence.contains(regExp)) {
setError(tr("The primer sequence contains non-ACGT symbols"));
return;
}
PrimerLibrary *library = PrimerLibrary::getInstance(stateInfo);
CHECK_OP(stateInfo, );
library->addRawPrimer(primer, stateInfo);
}
