void splitws(string inFolderName, double mass, string channel) {
cout << "Splitting workspace in " << channel << endl;
int flatInterpCode = 4;
int shapeInterpCode = 4;
bool do2011 = 0;
if (inFolderName.find("2011") != string::npos) do2011 = 1;
bool conditionalAsimov = 0;
bool doData = 1;
//if (inFolderName.find("_blind_") != string::npos) {
//conditionalAsimov = 0;
//}
//else {
//conditionalAsimov = 1;
//}
set<string> channelNames;
if (channel == "01j") {
channelNames.insert("em_signalLike1_0j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike2_0j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike1_0j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike2_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_AfrecSR_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_ASR_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_AfrecSR_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_ASR_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CfrecZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CfrecZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_0j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike1_1j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike2_1j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike1_1j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike2_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_AfrecSR_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_ASR_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_AfrecSR_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_ASR_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_topbox_1j"+string(!do2011?"_2012":""));
}
else if (channel == "0j") {
channelNames.insert("em_signalLike1_0j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike2_0j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike1_0j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike2_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_AfrecSR_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_ASR_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_AfrecSR_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_ASR_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CfrecZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CfrecZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_0j"+string(!do2011?"_2012":""));
}
else if (channel == "1j") {
channelNames.insert("em_signalLike1_1j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike2_1j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike1_1j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike2_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_AfrecSR_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_ASR_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_AfrecSR_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_ASR_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_topbox_1j"+string(!do2011?"_2012":""));
}
else if (channel == "OF01j") {
channelNames.insert("em_signalLike1_0j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike2_0j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike1_0j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike2_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_sscr_0j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike1_1j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike2_1j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike1_1j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike2_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_topbox_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_sscr_1j"+string(!do2011?"_2012":""));
}
else if (channel == "OF0j") {
channelNames.insert("em_signalLike1_0j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike2_0j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike1_0j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike2_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_sscr_0j"+string(!do2011?"_2012":""));
}
else if (channel == "OF1j") {
channelNames.insert("em_signalLike1_1j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike2_1j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike1_1j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike2_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_topbox_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_sscr_1j"+string(!do2011?"_2012":""));
}
else if (channel == "SF01j") {
channelNames.insert("SF_AfrecSR_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_ASR_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_AfrecSR_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_ASR_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CfrecZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CfrecZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_AfrecSR_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_ASR_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_AfrecSR_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_ASR_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_topbox_1j"+string(!do2011?"_2012":""));
}
else if (channel == "SF0j") {
channelNames.insert("SF_AfrecSR_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_ASR_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_AfrecSR_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_ASR_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CfrecZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CfrecZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_0j"+string(!do2011?"_2012":""));
}
else if (channel == "SF1j") {
channelNames.insert("SF_AfrecSR_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_ASR_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_AfrecSR_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_ASR_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_topbox_1j"+string(!do2011?"_2012":""));
}
else if (channel == "2j") {
channelNames.insert("em_signalLike1_2j"+string(!do2011?"_2012":""));
channelNames.insert("ee_signalLike1_2j"+string(!do2011?"_2012":""));
channelNames.insert("SF_topbox_2j"+string(!do2011?"_2012":""));
}
else if (channel == "OF2j") {
channelNames.insert("em_signalLike1_2j"+string(!do2011?"_2012":""));
channelNames.insert("SF_topbox_2j"+string(!do2011?"_2012":""));
}
else if (channel == "SF2j") {
channelNames.insert("ee_signalLike1_2j"+string(!do2011?"_2012":""));
channelNames.insert("SF_topbox_2j"+string(!do2011?"_2012":""));
}
else if (channel == "OF") {
channelNames.insert("em_signalLike1_0j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike2_0j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike1_0j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike2_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_0j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike1_1j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike2_1j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike1_1j"+string(!do2011?"_2012":""));
channelNames.insert("me_signalLike2_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_topbox_1j"+string(!do2011?"_2012":""));
channelNames.insert("em_signalLike1_2j"+string(!do2011?"_2012":""));
channelNames.insert("SF_topbox_2j"+string(!do2011?"_2012":""));
}
else if (channel == "SF") {
channelNames.insert("SF_AfrecSR_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_ASR_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_AfrecSR_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_ASR_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CfrecZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CfrecZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CZpeak_0j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_0j"+string(!do2011?"_2012":""));
channelNames.insert("SF_AfrecSR_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_ASR_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_AfrecSR_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_ASR_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("SF_CZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CfrecZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_CZpeak_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_mainControl_1j"+string(!do2011?"_2012":""));
channelNames.insert("OF_topbox_1j"+string(!do2011?"_2012":""));
channelNames.insert("ee_signalLike1_2j"+string(!do2011?"_2012":""));
channelNames.insert("SF_topbox_2j"+string(!do2011?"_2012":""));
}
else {
cout << "Channel " << channel << " not defined. Please check!" << endl;
exit(1);
}
// bool fix = 1;
stringstream inFileName;
inFileName << "workspaces/" << inFolderName << "/" << mass << ".root";
TFile f(inFileName.str().c_str());
RooWorkspace* w = (RooWorkspace*)f.Get("combWS");
if (!w) w = (RooWorkspace*)f.Get("combined");
RooDataSet* data = (RooDataSet*)w->data("combData");
if (!data) data = (RooDataSet*)w->data("obsData");
ModelConfig* mc = (ModelConfig*)w->obj("ModelConfig");
RooRealVar* weightVar = w->var("weightVar");
RooRealVar* mu = (RooRealVar*)mc->GetParametersOfInterest()->first();
if (!mu) mu = w->var("SigXsecOverSM");
const RooArgSet* mc_obs = mc->GetObservables();
const RooArgSet* mc_nuis = mc->GetNuisanceParameters();
const RooArgSet* mc_globs = mc->GetGlobalObservables();
const RooArgSet* mc_poi = mc->GetParametersOfInterest();
RooArgSet nuis = *mc_nuis;
RooArgSet antiNuis = *mc_nuis;
RooArgSet globs = *mc_globs;
RooArgSet antiGlobs = *mc_globs;
RooArgSet allParams;
RooSimultaneous* simPdf = (RooSimultaneous*)mc->GetPdf();
RooCategory* cat = (RooCategory*)&simPdf->indexCat();
RooArgSet nuis_tmp = nuis;
RooArgSet fullConstraints = *simPdf->getAllConstraints(*mc_obs,nuis_tmp,false);
vector<string> foundChannels;
vector<string> skippedChannels;
cout << "Getting constraints" << endl;
map<string, RooDataSet*> data_map;
map<string, RooAbsPdf*> pdf_map;
RooCategory* decCat = new RooCategory("dec_channel","dec_channel");
// int i = 0;
TIterator* catItr = cat->typeIterator();
RooCatType* type;
RooArgSet allConstraints;
while ((type = (RooCatType*)catItr->Next())) {
RooAbsPdf* pdf = simPdf->getPdf(type->GetName());
string typeName(type->GetName());
if (channelNames.size() && channelNames.find(typeName) == channelNames.end()) {
skippedChannels.push_back(typeName);
continue;
}
cout << "On channel " << type->GetName() << endl;
foundChannels.push_back(typeName);
decCat->defineType(type->GetName());
// pdf->getParameters(*data)->Print("v");
RooArgSet nuis_tmp1 = nuis;
RooArgSet nuis_tmp2 = nuis;
RooArgSet* constraints = pdf->getAllConstraints(*mc_obs, nuis_tmp1, true);
constraints->Print();
allConstraints.add(*constraints);
}
catItr->Reset();
while ((type = (RooCatType*)catItr->Next())) {
RooAbsPdf* pdf = simPdf->getPdf(type->GetName());
string typeName(type->GetName());
cout << "Considering type " << typeName << endl;
if (channelNames.size() && channelNames.find(typeName) == channelNames.end()) continue;
cout << "On channel " << type->GetName() << endl;
RooArgSet nuis_tmp1 = nuis;
RooArgSet nuis_tmp2 = nuis;
RooArgSet* constraints = pdf->getAllConstraints(*mc_obs, nuis_tmp1, true);
cout << "Adding pdf to map: " << typeName << " = " << pdf->GetName() << endl;
pdf_map[typeName] = pdf;
RooProdPdf prod("prod","prod",*constraints);
RooArgSet* params = pdf->getParameters(*data);
antiNuis.remove(*params);
antiGlobs.remove(*params);
allParams.add(*params);
// cout << type->GetName() << endl;
}
// return;
RooArgSet decNuis;
TIterator* nuiItr = mc_nuis->createIterator();
TIterator* parItr = allParams.createIterator();
RooAbsArg* nui, *par;
while ((par = (RooAbsArg*)parItr->Next())) {
nuiItr->Reset();
while ((nui = (RooAbsArg*)nuiItr->Next())) {
if (par == nui) decNuis.add(*nui);
}
}
RooArgSet decGlobs;
TIterator* globItr = mc_globs->createIterator();
parItr->Reset();
RooAbsArg* glob;
while ((par = (RooAbsArg*)parItr->Next())) {
globItr->Reset();
while ((glob = (RooAbsArg*)globItr->Next())) {
if (par == glob) decGlobs.add(*glob);
}
}
// antiNuis.Print();
// nuis.Print();
// globs.Print();
// i = 0;
TList* datalist = data->split(*cat, true);
TIterator* dataItr = datalist->MakeIterator();
RooAbsData* ds;
while ((ds = (RooAbsData*)dataItr->Next())) {
string typeName(ds->GetName());
if (channelNames.size() && channelNames.find(typeName) == channelNames.end()) continue;
cout << "Adding dataset to map: " << ds->GetName() << endl;
data_map[string(ds->GetName())] = (RooDataSet*)ds;
cout << ds->GetName() << endl;
}
RooSimultaneous* decPdf = new RooSimultaneous("decPdf","decPdf",pdf_map,*decCat);
RooArgSet decObs = *decPdf->getObservables(data);
// decObs.add(*(RooAbsArg*)weightVar);
decObs.add(*(RooAbsArg*)decCat);
decObs.Print();
nuis.remove(antiNuis);
globs.remove(antiGlobs);
// nuis.Print("v");
RooDataSet* decData = new RooDataSet("obsData","obsData",RooArgSet(decObs,*(RooAbsArg*)weightVar),Index(*decCat),Import(data_map),WeightVar(*weightVar));
decData->Print();
RooArgSet poi(*(RooAbsArg*)mu);
RooWorkspace decWS("combined");
ModelConfig decMC("ModelConfig",&decWS);
decMC.SetPdf(*decPdf);
decMC.SetObservables(decObs);
decMC.SetNuisanceParameters(decNuis);
decMC.SetGlobalObservables(decGlobs);
decMC.SetParametersOfInterest(poi);
decMC.Print();
decWS.import(*decPdf);
decWS.import(decMC);
decWS.import(*decData);
// decWS.Print();
ModelConfig* mcInWs = (ModelConfig*)decWS.obj("ModelConfig");
decPdf = (RooSimultaneous*)mcInWs->GetPdf();
// setup(mcInWs);
// return;
mcInWs->GetNuisanceParameters()->Print("v");
mcInWs->GetGlobalObservables()->Print("v");
// decData->tree()->Scan("*");
// Make asimov data
RooArgSet funcs = decWS.allFunctions();
TIterator* it = funcs.createIterator();
TObject* tempObj = 0;
while((tempObj=it->Next()))
{
FlexibleInterpVar* flex = dynamic_cast<FlexibleInterpVar*>(tempObj);
if(flex) {
flex->setAllInterpCodes(flatInterpCode);
}
PiecewiseInterpolation* piece = dynamic_cast<PiecewiseInterpolation*>(tempObj);
if(piece) {
piece->setAllInterpCodes(shapeInterpCode);
}
}
RooDataSet* dataInWs = (RooDataSet*)decWS.data("obsData");
makeAsimovData(mcInWs, conditionalAsimov && doData, &decWS, mcInWs->GetPdf(), dataInWs, 0);
makeAsimovData(mcInWs, conditionalAsimov && doData, &decWS, mcInWs->GetPdf(), dataInWs, 1);
makeAsimovData(mcInWs, conditionalAsimov && doData, &decWS, mcInWs->GetPdf(), dataInWs, 2);
system(("mkdir -vp workspaces/"+inFolderName+"_"+channel).c_str());
stringstream outFileName;
outFileName << "workspaces/" << inFolderName << "_" << channel << "/" << mass << ".root";
cout << "Exporting" << endl;
decWS.writeToFile(outFileName.str().c_str());
cout << "\nIncluded the following channels: " << endl;
for (int i=0;i<(int)foundChannels.size();i++) {
cout << "-> " << foundChannels[i] << endl;
}
cout << "\nSkipping the following channels: " << endl;
for (int i=0;i<(int)skippedChannels.size();i++) {
cout << "-> " << skippedChannels[i] << endl;
}
cout << "Done" << endl;
// decPdf->fitTo(*decData, Hesse(0), Minos(0), PrintLevel(0));
}
void OneSidedFrequentistUpperLimitWithBands(const char* infile = "",
const char* workspaceName = "combined",
const char* modelConfigName = "ModelConfig",
const char* dataName = "obsData") {
double confidenceLevel=0.95;
int nPointsToScan = 20;
int nToyMC = 200;
// -------------------------------------------------------
// First part is just to access a user-defined file
// or create the standard example file if it doesn't exist
const char* filename = "";
if (!strcmp(infile,"")) {
filename = "results/example_combined_GaussExample_model.root";
bool fileExist = !gSystem->AccessPathName(filename); // note opposite return code
// if file does not exists generate with histfactory
if (!fileExist) {
#ifdef _WIN32
cout << "HistFactory file cannot be generated on Windows - exit" << endl;
return;
#endif
// Normally this would be run on the command line
cout <<"will run standard hist2workspace example"<<endl;
gROOT->ProcessLine(".! prepareHistFactory .");
gROOT->ProcessLine(".! hist2workspace config/example.xml");
cout <<"\n\n---------------------"<<endl;
cout <<"Done creating example input"<<endl;
cout <<"---------------------\n\n"<<endl;
}
}
else
filename = infile;
// Try to open the file
TFile *file = TFile::Open(filename);
// if input file was specified byt not found, quit
if(!file ){
cout <<"StandardRooStatsDemoMacro: Input file " << filename << " is not found" << endl;
return;
}
// -------------------------------------------------------
// Now get the data and workspace
// get the workspace out of the file
RooWorkspace* w = (RooWorkspace*) file->Get(workspaceName);
if(!w){
cout <<"workspace not found" << endl;
return;
}
// get the modelConfig out of the file
ModelConfig* mc = (ModelConfig*) w->obj(modelConfigName);
// get the modelConfig out of the file
RooAbsData* data = w->data(dataName);
// make sure ingredients are found
if(!data || !mc){
w->Print();
cout << "data or ModelConfig was not found" <<endl;
return;
}
// -------------------------------------------------------
// Now get the POI for convenience
// you may want to adjust the range of your POI
RooRealVar* firstPOI = (RooRealVar*) mc->GetParametersOfInterest()->first();
/* firstPOI->setMin(0);*/
/* firstPOI->setMax(10);*/
// --------------------------------------------
// Create and use the FeldmanCousins tool
// to find and plot the 95% confidence interval
// on the parameter of interest as specified
// in the model config
// REMEMBER, we will change the test statistic
// so this is NOT a Feldman-Cousins interval
FeldmanCousins fc(*data,*mc);
fc.SetConfidenceLevel(confidenceLevel);
/* fc.AdditionalNToysFactor(0.25); // degrade/improve sampling that defines confidence belt*/
/* fc.UseAdaptiveSampling(true); // speed it up a bit, don't use for expected limits*/
fc.SetNBins(nPointsToScan); // set how many points per parameter of interest to scan
fc.CreateConfBelt(true); // save the information in the belt for plotting
// -------------------------------------------------------
// Feldman-Cousins is a unified limit by definition
// but the tool takes care of a few things for us like which values
// of the nuisance parameters should be used to generate toys.
// so let's just change the test statistic and realize this is
// no longer "Feldman-Cousins" but is a fully frequentist Neyman-Construction.
/* ProfileLikelihoodTestStatModified onesided(*mc->GetPdf());*/
/* fc.GetTestStatSampler()->SetTestStatistic(&onesided);*/
/* ((ToyMCSampler*) fc.GetTestStatSampler())->SetGenerateBinned(true); */
ToyMCSampler* toymcsampler = (ToyMCSampler*) fc.GetTestStatSampler();
ProfileLikelihoodTestStat* testStat = dynamic_cast<ProfileLikelihoodTestStat*>(toymcsampler->GetTestStatistic());
testStat->SetOneSided(true);
// Since this tool needs to throw toy MC the PDF needs to be
// extended or the tool needs to know how many entries in a dataset
// per pseudo experiment.
// In the 'number counting form' where the entries in the dataset
// are counts, and not values of discriminating variables, the
// datasets typically only have one entry and the PDF is not
// extended.
if(!mc->GetPdf()->canBeExtended()){
if(data->numEntries()==1)
fc.FluctuateNumDataEntries(false);
else
cout <<"Not sure what to do about this model" <<endl;
}
// We can use PROOF to speed things along in parallel
// However, the test statistic has to be installed on the workers
// so either turn off PROOF or include the modified test statistic
// in your `$ROOTSYS/roofit/roostats/inc` directory,
// add the additional line to the LinkDef.h file,
// and recompile root.
if (useProof) {
ProofConfig pc(*w, nworkers, "", false);
toymcsampler->SetProofConfig(&pc); // enable proof
}
if(mc->GetGlobalObservables()){
cout << "will use global observables for unconditional ensemble"<<endl;
mc->GetGlobalObservables()->Print();
toymcsampler->SetGlobalObservables(*mc->GetGlobalObservables());
}
// Now get the interval
PointSetInterval* interval = fc.GetInterval();
ConfidenceBelt* belt = fc.GetConfidenceBelt();
// print out the interval on the first Parameter of Interest
cout << "\n95% interval on " <<firstPOI->GetName()<<" is : ["<<
interval->LowerLimit(*firstPOI) << ", "<<
interval->UpperLimit(*firstPOI) <<"] "<<endl;
// get observed UL and value of test statistic evaluated there
RooArgSet tmpPOI(*firstPOI);
double observedUL = interval->UpperLimit(*firstPOI);
firstPOI->setVal(observedUL);
double obsTSatObsUL = fc.GetTestStatSampler()->EvaluateTestStatistic(*data,tmpPOI);
// Ask the calculator which points were scanned
RooDataSet* parameterScan = (RooDataSet*) fc.GetPointsToScan();
RooArgSet* tmpPoint;
// make a histogram of parameter vs. threshold
TH1F* histOfThresholds = new TH1F("histOfThresholds","",
parameterScan->numEntries(),
firstPOI->getMin(),
firstPOI->getMax());
histOfThresholds->GetXaxis()->SetTitle(firstPOI->GetName());
histOfThresholds->GetYaxis()->SetTitle("Threshold");
// loop through the points that were tested and ask confidence belt
// what the upper/lower thresholds were.
// For FeldmanCousins, the lower cut off is always 0
for(Int_t i=0; i<parameterScan->numEntries(); ++i){
tmpPoint = (RooArgSet*) parameterScan->get(i)->clone("temp");
//cout <<"get threshold"<<endl;
double arMax = belt->GetAcceptanceRegionMax(*tmpPoint);
double poiVal = tmpPoint->getRealValue(firstPOI->GetName()) ;
histOfThresholds->Fill(poiVal,arMax);
}
TCanvas* c1 = new TCanvas();
c1->Divide(2);
c1->cd(1);
histOfThresholds->SetMinimum(0);
histOfThresholds->Draw();
c1->cd(2);
// -------------------------------------------------------
// Now we generate the expected bands and power-constraint
// First: find parameter point for mu=0, with conditional MLEs for nuisance parameters
RooAbsReal* nll = mc->GetPdf()->createNLL(*data);
RooAbsReal* profile = nll->createProfile(*mc->GetParametersOfInterest());
firstPOI->setVal(0.);
profile->getVal(); // this will do fit and set nuisance parameters to profiled values
RooArgSet* poiAndNuisance = new RooArgSet();
if(mc->GetNuisanceParameters())
poiAndNuisance->add(*mc->GetNuisanceParameters());
poiAndNuisance->add(*mc->GetParametersOfInterest());
w->saveSnapshot("paramsToGenerateData",*poiAndNuisance);
RooArgSet* paramsToGenerateData = (RooArgSet*) poiAndNuisance->snapshot();
cout << "\nWill use these parameter points to generate pseudo data for bkg only" << endl;
paramsToGenerateData->Print("v");
RooArgSet unconditionalObs;
unconditionalObs.add(*mc->GetObservables());
unconditionalObs.add(*mc->GetGlobalObservables()); // comment this out for the original conditional ensemble
double CLb=0;
double CLbinclusive=0;
// Now we generate background only and find distribution of upper limits
TH1F* histOfUL = new TH1F("histOfUL","",100,0,firstPOI->getMax());
histOfUL->GetXaxis()->SetTitle("Upper Limit (background only)");
histOfUL->GetYaxis()->SetTitle("Entries");
for(int imc=0; imc<nToyMC; ++imc){
// set parameters back to values for generating pseudo data
// cout << "\n get current nuis, set vals, print again" << endl;
w->loadSnapshot("paramsToGenerateData");
// poiAndNuisance->Print("v");
RooDataSet* toyData = 0;
// now generate a toy dataset
if(!mc->GetPdf()->canBeExtended()){
if(data->numEntries()==1)
toyData = mc->GetPdf()->generate(*mc->GetObservables(),1);
else
cout <<"Not sure what to do about this model" <<endl;
} else{
// cout << "generating extended dataset"<<endl;
toyData = mc->GetPdf()->generate(*mc->GetObservables(),Extended());
}
// generate global observables
// need to be careful for simpdf
// RooDataSet* globalData = mc->GetPdf()->generate(*mc->GetGlobalObservables(),1);
RooSimultaneous* simPdf = dynamic_cast<RooSimultaneous*>(mc->GetPdf());
if(!simPdf){
RooDataSet *one = mc->GetPdf()->generate(*mc->GetGlobalObservables(), 1);
const RooArgSet *values = one->get();
RooArgSet *allVars = mc->GetPdf()->getVariables();
*allVars = *values;
delete allVars;
delete values;
delete one;
} else {
//try fix for sim pdf
TIterator* iter = simPdf->indexCat().typeIterator() ;
RooCatType* tt = NULL;
while((tt=(RooCatType*) iter->Next())) {
// Get pdf associated with state from simpdf
RooAbsPdf* pdftmp = simPdf->getPdf(tt->GetName()) ;
// Generate only global variables defined by the pdf associated with this state
RooArgSet* globtmp = pdftmp->getObservables(*mc->GetGlobalObservables()) ;
RooDataSet* tmp = pdftmp->generate(*globtmp,1) ;
// Transfer values to output placeholder
*globtmp = *tmp->get(0) ;
// Cleanup
delete globtmp ;
delete tmp ;
}
}
// globalData->Print("v");
// unconditionalObs = *globalData->get();
// mc->GetGlobalObservables()->Print("v");
// delete globalData;
// cout << "toy data = " << endl;
// toyData->get()->Print("v");
// get test stat at observed UL in observed data
firstPOI->setVal(observedUL);
double toyTSatObsUL = fc.GetTestStatSampler()->EvaluateTestStatistic(*toyData,tmpPOI);
// toyData->get()->Print("v");
// cout <<"obsTSatObsUL " <<obsTSatObsUL << "toyTS " << toyTSatObsUL << endl;
if(obsTSatObsUL < toyTSatObsUL) // not sure about <= part yet
CLb+= (1.)/nToyMC;
if(obsTSatObsUL <= toyTSatObsUL) // not sure about <= part yet
CLbinclusive+= (1.)/nToyMC;
// loop over points in belt to find upper limit for this toy data
double thisUL = 0;
for(Int_t i=0; i<parameterScan->numEntries(); ++i){
tmpPoint = (RooArgSet*) parameterScan->get(i)->clone("temp");
double arMax = belt->GetAcceptanceRegionMax(*tmpPoint);
firstPOI->setVal( tmpPoint->getRealValue(firstPOI->GetName()) );
// double thisTS = profile->getVal();
double thisTS = fc.GetTestStatSampler()->EvaluateTestStatistic(*toyData,tmpPOI);
// cout << "poi = " << firstPOI->getVal()
// << " max is " << arMax << " this profile = " << thisTS << endl;
// cout << "thisTS = " << thisTS<<endl;
if(thisTS<=arMax){
thisUL = firstPOI->getVal();
} else{
break;
}
}
/*
// loop over points in belt to find upper limit for this toy data
double thisUL = 0;
for(Int_t i=0; i<histOfThresholds->GetNbinsX(); ++i){
tmpPoint = (RooArgSet*) parameterScan->get(i)->clone("temp");
cout <<"---------------- "<<i<<endl;
tmpPoint->Print("v");
cout << "from hist " << histOfThresholds->GetBinCenter(i+1) <<endl;
double arMax = histOfThresholds->GetBinContent(i+1);
// cout << " threhold from Hist = aMax " << arMax<<endl;
// double arMax2 = belt->GetAcceptanceRegionMax(*tmpPoint);
// cout << "from scan arMax2 = "<< arMax2 << endl; // not the same due to TH1F not TH1D
// cout << "scan - hist" << arMax2-arMax << endl;
firstPOI->setVal( histOfThresholds->GetBinCenter(i+1));
// double thisTS = profile->getVal();
double thisTS = fc.GetTestStatSampler()->EvaluateTestStatistic(*toyData,tmpPOI);
// cout << "poi = " << firstPOI->getVal()
// << " max is " << arMax << " this profile = " << thisTS << endl;
// cout << "thisTS = " << thisTS<<endl;
// NOTE: need to add a small epsilon term for single precision vs. double precision
if(thisTS<=arMax + 1e-7){
thisUL = firstPOI->getVal();
} else{
break;
}
}
*/
histOfUL->Fill(thisUL);
// for few events, data is often the same, and UL is often the same
// cout << "thisUL = " << thisUL<<endl;
delete toyData;
}
histOfUL->Draw();
c1->SaveAs("one-sided_upper_limit_output.pdf");
// if you want to see a plot of the sampling distribution for a particular scan point:
/*
SamplingDistPlot sampPlot;
int indexInScan = 0;
tmpPoint = (RooArgSet*) parameterScan->get(indexInScan)->clone("temp");
firstPOI->setVal( tmpPoint->getRealValue(firstPOI->GetName()) );
toymcsampler->SetParametersForTestStat(tmpPOI);
SamplingDistribution* samp = toymcsampler->GetSamplingDistribution(*tmpPoint);
sampPlot.AddSamplingDistribution(samp);
sampPlot.Draw();
*/
// Now find bands and power constraint
Double_t* bins = histOfUL->GetIntegral();
TH1F* cumulative = (TH1F*) histOfUL->Clone("cumulative");
cumulative->SetContent(bins);
double band2sigDown, band1sigDown, bandMedian, band1sigUp,band2sigUp;
for(int i=1; i<=cumulative->GetNbinsX(); ++i){
if(bins[i]<RooStats::SignificanceToPValue(2))
band2sigDown=cumulative->GetBinCenter(i);
if(bins[i]<RooStats::SignificanceToPValue(1))
band1sigDown=cumulative->GetBinCenter(i);
if(bins[i]<0.5)
bandMedian=cumulative->GetBinCenter(i);
if(bins[i]<RooStats::SignificanceToPValue(-1))
band1sigUp=cumulative->GetBinCenter(i);
if(bins[i]<RooStats::SignificanceToPValue(-2))
band2sigUp=cumulative->GetBinCenter(i);
}
cout << "-2 sigma band " << band2sigDown << endl;
cout << "-1 sigma band " << band1sigDown << " [Power Constraint)]" << endl;
cout << "median of band " << bandMedian << endl;
cout << "+1 sigma band " << band1sigUp << endl;
cout << "+2 sigma band " << band2sigUp << endl;
// print out the interval on the first Parameter of Interest
cout << "\nobserved 95% upper-limit "<< interval->UpperLimit(*firstPOI) <<endl;
cout << "CLb strict [P(toy>obs|0)] for observed 95% upper-limit "<< CLb <<endl;
cout << "CLb inclusive [P(toy>=obs|0)] for observed 95% upper-limit "<< CLbinclusive <<endl;
delete profile;
delete nll;
}
void PlotAll(TString wsname)
{
char* binLabels[19] = {"60","70","80","90","100","110","120","130","140","150","160","170","180","190","200","250","300","400","1000"};
//get the stuff from the workspace:
TFile* file=TFile::Open(wsname);
RooWorkspace* ws = (RooWorkspace*)file->Get("combined");
ModelConfig *mc = (ModelConfig*)ws->obj("ModelConfig");
RooAbsData *data = ws->data("obsData");
RooSimultaneous* simPdf=(RooSimultaneous*)(mc->GetPdf());
RooAbsReal* nll=simPdf->createNLL(*data);
// FPT 0 **************************************
// EM channel
RooCategory* chanCat = (RooCategory*) (&simPdf->indexCat());
TIterator* iterat = chanCat->typeIterator() ;
RooCatType* ttype = (RooCatType*)iterat->Next();
RooAbsPdf *pdf_stateEM = simPdf->getPdf(ttype->GetName()) ;
RooArgSet *obstmpEM = pdf_stateEM->getObservables( *mc->GetObservables() ) ;
// get EM data
RooAbsData *dataEM = data->reduce(Form("%s==%s::%s",chanCat->GetName(),chanCat->GetName(),ttype->GetName()));
RooRealVar *obsEM = ((RooRealVar*) obstmpEM->first());
TString chanName1(ttype->GetName());
// create data histogram
TH1* hdataEM = dataEM->createHistogram("Data "+chanName1,*obsEM);
// set errors to gaussian
for (int ib=0 ; ib<hdataEM->GetNbinsX()+1 ; ib++) hdataEM->SetBinError(ib, sqrt(hdataEM->GetBinContent(ib)));
double EMnorm = pdf_stateEM->expectedEvents(*obsEM);
//****************************
// ME channel
ttype = (RooCatType*)iterat->Next();
RooAbsPdf* pdf_stateME = simPdf->getPdf(ttype->GetName()) ;
RooArgSet* obstmpME = pdf_stateME->getObservables( *mc->GetObservables() ) ;
// get ME data
RooAbsData *dataME = data->reduce(Form("%s==%s::%s",chanCat->GetName(),chanCat->GetName(),ttype->GetName()));
RooRealVar* obsME = ((RooRealVar*) obstmpME->first());
TString chanName2(ttype->GetName());
// create data histogram
TH1* hdataME = dataME->createHistogram("Data "+chanName2,*obsME);
// set errors to gaussian
for (int ib=0 ; ib<hdataME->GetNbinsX()+1 ; ib++) hdataME->SetBinError(ib, sqrt(hdataME->GetBinContent(ib)));
// get initial BG histogram
//TH1* h_initial_BG_EM = pdf_stateEM->createHistogram("initial_BG_EM",*obsEM);
//TH1* h_initial_BG_ME = pdf_stateME->createHistogram("initial_BG_ME",*obsME);
double MEnorm = pdf_stateME->expectedEvents(*obsME);
cout << "EM expected events = " << EMnorm << ", ME expected events = " << MEnorm << "." << endl;
//h_initial_BG_EM->Scale(EMnorm);
//h_initial_BG_ME->Scale(MEnorm);
// get initial gammas
int nbins = hdataEM->GetNbinsX();
double InitGamma[nbins];
for (int i=0; i<nbins; i++)
{
TString varname = "gamma_B0_l1pt0_bin_"+NumberToString(i);
InitGamma[i] = ws->var(varname)->getVal();
cout << "initial gamma"+NumberToString(i)+" = " << InitGamma[i] << endl;
}
double InitFpt = ws->var("fl1pt_l1pt0")->getVal();
cout << "initial fpt_l1pt0 = " << InitFpt << endl;
// DO THE GLOBAL FIT
minimize(nll);
// get final BG histograms
TH1* h_final_BG_EM = pdf_stateEM->createHistogram("final_BG_EM",*obsEM);
TH1* h_final_BG_ME = pdf_stateME->createHistogram("final_BG_ME",*obsME);
h_final_BG_EM->Scale(EMnorm);
h_final_BG_ME->Scale(MEnorm);
// uncertainty bands
TH1D* BuncertaintyEM = new TH1D("BuncertaintyEM","BuncertaintyEM",nbins,0,nbins);
TH1D* BuncertaintyME = new TH1D("BuncertaintyME","BuncertaintyME",nbins,0,nbins);
for (int i=1; i<=nbins; i++){
double sigbEM = h_final_BG_EM->GetBinError(i);
double bEM = h_final_BG_EM->GetBinContent(i);
BuncertaintyEM->SetBinError(i,sigbEM); BuncertaintyEM->SetBinContent(i,bEM);
double sigbME = h_final_BG_ME->GetBinError(i);
double bME = h_final_BG_ME->GetBinContent(i);
BuncertaintyME->SetBinError(i,sigbME); BuncertaintyME->SetBinContent(i,bME);
}
//BuncertaintyEM->SetFillStyle(3004);
BuncertaintyEM->SetFillColor(kGreen-9);
BuncertaintyEM->SetLineColor(kBlack); BuncertaintyEM->SetLineStyle(2);
//BuncertaintyME->SetFillStyle(3004);
BuncertaintyME->SetFillColor(kBlue-9);
BuncertaintyME->SetLineColor(kBlack); BuncertaintyME->SetLineStyle(2);
// get gammas after fit
double FinalGamma[nbins];
//TH1* h_initBG_times_gamma = (TH1*)h_initial_BG_EM->Clone("initBGEM_times_gamma");
for (int i=0; i<nbins; i++)
{
TString varname = "gamma_B0_l1pt0_bin_"+NumberToString(i);
FinalGamma[i] = ws->var(varname)->getVal();
cout << "Final gamma in bin "+NumberToString(i)+" = " << FinalGamma[i] << endl;
// h_initBG_times_gamma->SetBinContent(i+1,h_initial_BG_EM->GetBinContent(i+1)*FinalGamma[i]);
}
//double FinalFpt = ws->var("fl1pt_l1pt0")->getVal();
// get final alpha (pull)
RooRealVar* alphaVar = ws->var("alpha_l1ptsys_l1pt0");
double alpha, alphaErr;
if (alphaVar != NULL) {
alpha = ws->var("alpha_l1ptsys_l1pt0")->getVal();
alphaErr = ws->var("alpha_l1ptsys_l1pt0")->getError();
}
//FOR UNCONSTRAINED FPT - get final fpts
double FinalFpt[5];
double FinalFptErr[5];
for (int k=0; k<5; k++){
TString varname = "fl1pt_l1pt"+NumberToString(k);
FinalFpt[k] = ws->var(varname)->getVal();
FinalFptErr[k] = ws->var(varname)->getError();
cout << varname << " = " << FinalFpt[k] << " +- " << FinalFptErr[k] << endl;
}
// get POI value
double mu = ws->var("mu_BR_htm")->getVal();
double muErr = ws->var("mu_BR_htm")->getError();
// Draw
TCanvas* c1 = new TCanvas("BG and Data "+chanName1+" "+chanName2,"BG and Data "+chanName1+" "+chanName2,600,600);
BuncertaintyEM->Draw("E3 sames"); BuncertaintyME->Draw("E3 sames");
//h_initial_BG_EM->SetLineColor(kGreen+2); h_initial_BG_EM->SetLineStyle(2); h_initial_BG_EM->Draw("sames");
hdataEM->SetLineColor(kGreen+2); hdataEM->SetMarkerStyle(20); hdataEM->SetMarkerColor(kGreen+2);
hdataEM->Draw("e1 sames");
//h_initial_BG_ME->SetLineColor(kBlue); h_initial_BG_ME->SetLineStyle(2); h_initial_BG_ME->Draw("sames");
hdataME->SetLineColor(kBlue); hdataME->SetMarkerStyle(20); hdataME->SetMarkerColor(kBlue);
hdataME->Draw("e1 sames");
h_final_BG_EM->SetLineColor(kGreen+2); h_final_BG_EM->SetLineWidth(2); h_final_BG_EM->Draw("sames");
h_final_BG_ME->SetLineColor(kBlue); h_final_BG_ME->SetLineWidth(2); h_final_BG_ME->Draw("sames");
TLegend* leg = new TLegend(0.5,0.45,0.85,0.65);
leg->SetFillColor(kWhite); leg->SetBorderSize(1); leg->SetLineColor(0); //leg->SetTextFont(14);
leg->SetTextSize(.03);
leg->AddEntry(hdataME,"DATA #mue","lep");
leg->AddEntry(hdataEM,"DATA e#mu","lep");
//leg->AddEntry(h_initial_BG_ME,"Initial #mue PDF","l");
//leg->AddEntry(h_initial_BG_EM,"Initial e#mu PDF","l");
leg->AddEntry(h_final_BG_ME,"#mue PDF = #gamma_{i}B_{i} + #muS_{i}","l");
leg->AddEntry(h_final_BG_EM,"e#mu PDF = f(1+#alpha#sigma)(#gamma_{i}B_{i}+#muW_{i})","l");
leg->Draw();
cout << " ********************* Fit Values **************************** " << endl;
if (alphaVar != NULL){cout << "alpha = " << alpha << " +- " << alphaErr << endl;}
cout << "mu = " << mu << " +- " << muErr << endl;
TString WriteDownAlphaValue;
TString WriteDownMuValue;
WriteDownAlphaValue = "Fpt0 = ";
WriteDownMuValue = "#mu = ";
WriteDownAlphaValue += Form("%4.4f",FinalFpt[0]);
WriteDownAlphaValue += "#pm";
WriteDownAlphaValue += Form("%4.4f",FinalFptErr[0]);
WriteDownMuValue += Form("%4.4f",mu);
WriteDownMuValue += "#pm";
WriteDownMuValue += Form("%4.4f",muErr);
TLatex *texl = new TLatex(12,25,WriteDownAlphaValue);
texl->SetTextAlign(22); texl->SetTextSize(0.03);
TLatex *texl2 = new TLatex(12,23,WriteDownMuValue);
texl2->SetTextAlign(22); texl2->SetTextSize(0.03);
texl->Draw();
texl2->Draw();
//FPT 1 ***********************************
ttype = (RooCatType*)iterat->Next();
RooAbsPdf *pdf_stateEM1 = simPdf->getPdf(ttype->GetName()) ;
RooArgSet *obstmpEM1 = pdf_stateEM1->getObservables( *mc->GetObservables() ) ;
RooAbsData *dataEM1 = data->reduce(Form("%s==%s::%s",chanCat->GetName(),chanCat->GetName(),ttype->GetName()));
RooRealVar *obsEM1 = ((RooRealVar*) obstmpEM1->first());
TString chanName11(ttype->GetName());
TH1* hdataEM1 = dataEM1->createHistogram("Data "+chanName11,*obsEM1);
for (int ib=0 ; ib<hdataEM1->GetNbinsX()+1 ; ib++) hdataEM1->SetBinError(ib, sqrt(hdataEM1->GetBinContent(ib)));
double EMnorm1 = pdf_stateEM1->expectedEvents(*obsEM1);
ttype = (RooCatType*)iterat->Next();
RooAbsPdf* pdf_stateME1 = simPdf->getPdf(ttype->GetName()) ;
RooArgSet* obstmpME1 = pdf_stateME1->getObservables( *mc->GetObservables() ) ;
RooAbsData *dataME1 = data->reduce(Form("%s==%s::%s",chanCat->GetName(),chanCat->GetName(),ttype->GetName()));
RooRealVar* obsME1 = ((RooRealVar*) obstmpME1->first());
TString chanName21(ttype->GetName());
TH1* hdataME1 = dataME1->createHistogram("Data "+chanName21,*obsME1);
for (int ib=0 ; ib<hdataME1->GetNbinsX()+1 ; ib++) hdataME1->SetBinError(ib, sqrt(hdataME1->GetBinContent(ib)));
double MEnorm1 = pdf_stateME1->expectedEvents(*obsME1);
TH1* h_final_BG_EM1 = pdf_stateEM1->createHistogram("final_BG_EM1",*obsEM1);
TH1* h_final_BG_ME1 = pdf_stateME1->createHistogram("final_BG_ME1",*obsME1);
h_final_BG_EM1->Scale(EMnorm1);
h_final_BG_ME1->Scale(MEnorm1);
TH1D* BuncertaintyEM1 = new TH1D("BuncertaintyEM1","BuncertaintyEM1",nbins,0,nbins);
TH1D* BuncertaintyME1 = new TH1D("BuncertaintyME1","BuncertaintyME1",nbins,0,nbins);
for (int i=1; i<=nbins; i++){
double sigbEM = h_final_BG_EM1->GetBinError(i);
double bEM = h_final_BG_EM1->GetBinContent(i);
BuncertaintyEM1->SetBinError(i,sigbEM); BuncertaintyEM1->SetBinContent(i,bEM);
double sigbME = h_final_BG_ME1->GetBinError(i);
double bME = h_final_BG_ME1->GetBinContent(i);
BuncertaintyME1->SetBinError(i,sigbME); BuncertaintyME1->SetBinContent(i,bME);
}
BuncertaintyEM1->SetFillColor(kGreen-9);
BuncertaintyEM1->SetLineColor(kBlack); BuncertaintyEM1->SetLineStyle(2);
BuncertaintyME1->SetFillColor(kBlue-9);
BuncertaintyME1->SetLineColor(kBlack); BuncertaintyME1->SetLineStyle(2);
double FinalGamma1[nbins];
for (int i=0; i<nbins; i++)
{
TString varname = "gamma_B0_l1pt1_bin_"+NumberToString(i);
FinalGamma1[i] = ws->var(varname)->getVal();
cout << "Final gamma in bin "+NumberToString(i)+" = " << FinalGamma1[i] << endl;
}
TCanvas* c2 = new TCanvas("BG and Data "+chanName11+" "+chanName21,"BG and Data "+chanName11+" "+chanName21,600,600);
BuncertaintyEM1->Draw("E3 sames"); BuncertaintyME1->Draw("E3 sames");
hdataEM1->SetLineColor(kGreen+2); hdataEM1->SetMarkerStyle(20); hdataEM1->SetMarkerColor(kGreen+2);
hdataEM1->Draw("e1 sames");
hdataME1->SetLineColor(kBlue); hdataME1->SetMarkerStyle(20); hdataME1->SetMarkerColor(kBlue);
hdataME1->Draw("e1 sames");
h_final_BG_EM1->SetLineColor(kGreen+2); h_final_BG_EM1->SetLineWidth(2); h_final_BG_EM1->Draw("sames");
h_final_BG_ME1->SetLineColor(kBlue); h_final_BG_ME1->SetLineWidth(2); h_final_BG_ME1->Draw("sames");
leg->Draw();
cout << " ********************* Fit Values **************************** " << endl;
cout << "mu = " << mu << " +- " << muErr << endl;
TString WriteDownAlphaValue1;
WriteDownAlphaValue1 = "Fpt1 = ";
WriteDownAlphaValue1 += Form("%4.4f",FinalFpt[1]);
WriteDownAlphaValue1 += "#pm";
WriteDownAlphaValue1 += Form("%4.4f",FinalFptErr[1]);
TLatex *texl11 = new TLatex(12,25,WriteDownAlphaValue1);
texl11->SetTextAlign(22); texl11->SetTextSize(0.03);
texl11->Draw();
texl2->Draw();
}
void Plot_BG(TString wsname)
{
//get the stuff from the workspace:
TFile* file=TFile::Open(wsname);
RooWorkspace* ws = (RooWorkspace*)file->Get("combined");
mc = (ModelConfig*)ws->obj("ModelConfig");
data = ws->data("obsData");
RooSimultaneous* simPdf=(RooSimultaneous*)(mc->GetPdf());
RooAbsReal* nll=simPdf->createNLL(*data);
//run on channels
RooCategory* chanCat = (RooCategory*) (&simPdf->indexCat());
TIterator* iterat = chanCat->typeIterator() ;
RooCatType* ttype;
bool stop = kFALSE;
while ((ttype = (RooCatType*) iterat->Next())&&!stop)
{
// bool toggle to run on one channel or all
stop = kTRUE;
RooAbsPdf *pdf_state = simPdf->getPdf(ttype->GetName()) ;
RooArgSet *obstmp = pdf_state->getObservables( *mc->GetObservables() ) ;
RooAbsData *datatmp = data->reduce(Form("%s==%s::%s",chanCat->GetName(),chanCat->GetName(),ttype->GetName()));
RooRealVar *obs = ((RooRealVar*) obstmp->first());
TString chanName(ttype->GetName());
// get data
TH1* hdata = datatmp->createHistogram("Data "+chanName,*obs);
// set errors to gaussian
for (int ib=0 ; ib<hdata->GetNbinsX()+1 ; ib++) hdata->SetBinError(ib, sqrt(hdata->GetBinContent(ib)));
// get initial BG
TH1* h_initial_BG = pdf_state->createHistogram("initial_BG_"+chanName,*obs);
// get initial gammas
int nbins = h_initial_BG->GetNbinsX();
double InitGamma[nbins];
for (int i=0; i<nbins; i++)
{
TString varname = "gamma_B0_0j_l1pt0_bin_"+NumberToString(i);
InitGamma[i] = ws->var(varname)->getVal();
cout << "initial gamma"+NumberToString(i)+" = " << InitGamma[i] << endl;
}
double InitFpt = ws->var("fl1pt_l1pt0")->getVal();
cout << "initial fpt_l1pt0 = " << InitFpt << endl;
TCanvas* c1 = new TCanvas("BG and Data "+chanName,"BG and Data "+chanName,600,600);
h_initial_BG->Draw();
//hdata->DrawNormalized("sames E1");
// DO THE GLOBAL FIT
RooMinimizer minim(*nll);
//set some options:
minim.setPrintLevel(0);
minim.optimizeConst(1);
minim.setOffsetting(true);
minim.setMinimizerType("Minuit2");
minim.minimize("Minuit2");
minim.setStrategy(3); //0-3 where 0 is the fastest
minim.migrad();
// get gammas after fit
double FinalGamma[nbins];
TH1* h_initBG_times_gamma = (TH1*)h_initial_BG->Clone("initBG_times_gamma");
for (int i=0; i<nbins; i++)
{
TString varname = "gamma_B0_0j_l1pt0_bin_"+NumberToString(i);
FinalGamma[i] = ws->var(varname)->getVal();
cout << "Final gamma in bin "+NumberToString(i)+" = " << FinalGamma[i] << endl;
h_initBG_times_gamma->SetBinContent(i+1,h_initial_BG->GetBinContent(i+1)*FinalGamma[i]);
}
double FinalFpt = ws->var("fl1pt_l1pt0")->getVal();
cout << "initial fpt_l1pt0 = " << InitFpt << endl;
cout << "final fpt_l1pt0 = " << FinalFpt << endl;
TH1* h_final_BG = pdf_state->createHistogram("final_BG_"+chanName,*obs);
//TCanvas* cf = new TCanvas("final BG","final BG",600,600);
h_final_BG->Draw("sames");
h_initBG_times_gamma->Draw("sames");
TH1* h_ratio = (TH1*)h_initial_BG->Clone("h_ratio");
h_ratio->Divide(h_final_BG);
//h_ratio->Draw();
cout << "channel name = " << chanName << endl;
for ( int j=1; j<=nbins; j++)
{
double init = h_initial_BG->GetBinContent(j);
double fina = h_final_BG->GetBinContent(j);
double r = (fina)/init;
cout << "in bin " << j << ", initial B = " << init << ", final B = " << fina << ", ratio = " << r << ", Gamma = " << FinalGamma[j-1] << endl;
}
}
}
void StandardHistFactoryPlotsWithCategories(const char* infile = "",
const char* workspaceName = "combined",
const char* modelConfigName = "ModelConfig",
const char* dataName = "obsData"){
double nSigmaToVary=5.;
double muVal=0;
bool doFit=false;
// -------------------------------------------------------
// First part is just to access a user-defined file
// or create the standard example file if it doesn't exist
const char* filename = "";
if (!strcmp(infile,"")) {
filename = "results/example_combined_GaussExample_model.root";
bool fileExist = !gSystem->AccessPathName(filename); // note opposite return code
// if file does not exists generate with histfactory
if (!fileExist) {
#ifdef _WIN32
cout << "HistFactory file cannot be generated on Windows - exit" << endl;
return;
#endif
// Normally this would be run on the command line
cout <<"will run standard hist2workspace example"<<endl;
gROOT->ProcessLine(".! prepareHistFactory .");
gROOT->ProcessLine(".! hist2workspace config/example.xml");
cout <<"\n\n---------------------"<<endl;
cout <<"Done creating example input"<<endl;
cout <<"---------------------\n\n"<<endl;
}
}
else
filename = infile;
// Try to open the file
TFile *file = TFile::Open(filename);
// if input file was specified byt not found, quit
if(!file ){
cout <<"StandardRooStatsDemoMacro: Input file " << filename << " is not found" << endl;
return;
}
// -------------------------------------------------------
// Tutorial starts here
// -------------------------------------------------------
// get the workspace out of the file
RooWorkspace* w = (RooWorkspace*) file->Get(workspaceName);
if(!w){
cout <<"workspace not found" << endl;
return;
}
// get the modelConfig out of the file
ModelConfig* mc = (ModelConfig*) w->obj(modelConfigName);
// get the modelConfig out of the file
RooAbsData* data = w->data(dataName);
// make sure ingredients are found
if(!data || !mc){
w->Print();
cout << "data or ModelConfig was not found" <<endl;
return;
}
// -------------------------------------------------------
// now use the profile inspector
RooRealVar* obs = (RooRealVar*)mc->GetObservables()->first();
TList* list = new TList();
RooRealVar * firstPOI = dynamic_cast<RooRealVar*>(mc->GetParametersOfInterest()->first());
firstPOI->setVal(muVal);
// firstPOI->setConstant();
if(doFit){
mc->GetPdf()->fitTo(*data);
}
// -------------------------------------------------------
mc->GetNuisanceParameters()->Print("v");
int nPlotsMax = 1000;
cout <<" check expectedData by category"<<endl;
RooDataSet* simData=NULL;
RooSimultaneous* simPdf = NULL;
if(strcmp(mc->GetPdf()->ClassName(),"RooSimultaneous")==0){
cout <<"Is a simultaneous PDF"<<endl;
simPdf = (RooSimultaneous *)(mc->GetPdf());
} else {
cout <<"Is not a simultaneous PDF"<<endl;
}
if(doFit) {
RooCategory* channelCat = (RooCategory*) (&simPdf->indexCat());
TIterator* iter = channelCat->typeIterator() ;
RooCatType* tt = NULL;
tt=(RooCatType*) iter->Next();
RooAbsPdf* pdftmp = ((RooSimultaneous*)mc->GetPdf())->getPdf(tt->GetName()) ;
RooArgSet* obstmp = pdftmp->getObservables(*mc->GetObservables()) ;
obs = ((RooRealVar*)obstmp->first());
RooPlot* frame = obs->frame();
cout <<Form("%s==%s::%s",channelCat->GetName(),channelCat->GetName(),tt->GetName())<<endl;
cout << tt->GetName() << " " << channelCat->getLabel() <<endl;
data->plotOn(frame,MarkerSize(1),Cut(Form("%s==%s::%s",channelCat->GetName(),channelCat->GetName(),tt->GetName())),DataError(RooAbsData::None));
Double_t normCount = data->sumEntries(Form("%s==%s::%s",channelCat->GetName(),channelCat->GetName(),tt->GetName())) ;
pdftmp->plotOn(frame,LineWidth(2.),Normalization(normCount,RooAbsReal::NumEvent)) ;
frame->Draw();
cout <<"expected events = " << mc->GetPdf()->expectedEvents(*data->get()) <<endl;
return;
}
int nPlots=0;
if(!simPdf){
TIterator* it = mc->GetNuisanceParameters()->createIterator();
RooRealVar* var = NULL;
while( (var = (RooRealVar*) it->Next()) != NULL){
RooPlot* frame = obs->frame();
frame->SetYTitle(var->GetName());
data->plotOn(frame,MarkerSize(1));
var->setVal(0);
mc->GetPdf()->plotOn(frame,LineWidth(1.));
var->setVal(1);
mc->GetPdf()->plotOn(frame,LineColor(kRed),LineStyle(kDashed),LineWidth(1));
var->setVal(-1);
mc->GetPdf()->plotOn(frame,LineColor(kGreen),LineStyle(kDashed),LineWidth(1));
list->Add(frame);
var->setVal(0);
}
} else {
RooCategory* channelCat = (RooCategory*) (&simPdf->indexCat());
// TIterator* iter = simPdf->indexCat().typeIterator() ;
TIterator* iter = channelCat->typeIterator() ;
RooCatType* tt = NULL;
while(nPlots<nPlotsMax && (tt=(RooCatType*) iter->Next())) {
cout << "on type " << tt->GetName() << " " << endl;
// Get pdf associated with state from simpdf
RooAbsPdf* pdftmp = simPdf->getPdf(tt->GetName()) ;
// Generate observables defined by the pdf associated with this state
RooArgSet* obstmp = pdftmp->getObservables(*mc->GetObservables()) ;
// obstmp->Print();
obs = ((RooRealVar*)obstmp->first());
TIterator* it = mc->GetNuisanceParameters()->createIterator();
RooRealVar* var = NULL;
while(nPlots<nPlotsMax && (var = (RooRealVar*) it->Next())){
TCanvas* c2 = new TCanvas("c2");
RooPlot* frame = obs->frame();
frame->SetName(Form("frame%d",nPlots));
frame->SetYTitle(var->GetName());
cout <<Form("%s==%s::%s",channelCat->GetName(),channelCat->GetName(),tt->GetName())<<endl;
cout << tt->GetName() << " " << channelCat->getLabel() <<endl;
data->plotOn(frame,MarkerSize(1),Cut(Form("%s==%s::%s",channelCat->GetName(),channelCat->GetName(),tt->GetName())),DataError(RooAbsData::None));
Double_t normCount = data->sumEntries(Form("%s==%s::%s",channelCat->GetName(),channelCat->GetName(),tt->GetName())) ;
if(strcmp(var->GetName(),"Lumi")==0){
cout <<"working on lumi"<<endl;
var->setVal(w->var("nominalLumi")->getVal());
var->Print();
} else{
var->setVal(0);
}
// w->allVars().Print("v");
// mc->GetNuisanceParameters()->Print("v");
// pdftmp->plotOn(frame,LineWidth(2.));
// mc->GetPdf()->plotOn(frame,LineWidth(2.),Slice(*channelCat,tt->GetName()),ProjWData(*data));
//pdftmp->plotOn(frame,LineWidth(2.),Slice(*channelCat,tt->GetName()),ProjWData(*data));
normCount = pdftmp->expectedEvents(*obs);
pdftmp->plotOn(frame,LineWidth(2.),Normalization(normCount,RooAbsReal::NumEvent)) ;
if(strcmp(var->GetName(),"Lumi")==0){
cout <<"working on lumi"<<endl;
var->setVal(w->var("nominalLumi")->getVal()+0.05);
var->Print();
} else{
var->setVal(nSigmaToVary);
}
// pdftmp->plotOn(frame,LineColor(kRed),LineStyle(kDashed),LineWidth(2));
// mc->GetPdf()->plotOn(frame,LineColor(kRed),LineStyle(kDashed),LineWidth(2.),Slice(*channelCat,tt->GetName()),ProjWData(*data));
//pdftmp->plotOn(frame,LineColor(kRed),LineStyle(kDashed),LineWidth(2.),Slice(*channelCat,tt->GetName()),ProjWData(*data));
normCount = pdftmp->expectedEvents(*obs);
pdftmp->plotOn(frame,LineWidth(2.),LineColor(kRed),LineStyle(kDashed),Normalization(normCount,RooAbsReal::NumEvent)) ;
if(strcmp(var->GetName(),"Lumi")==0){
cout <<"working on lumi"<<endl;
var->setVal(w->var("nominalLumi")->getVal()-0.05);
var->Print();
} else{
var->setVal(-nSigmaToVary);
}
// pdftmp->plotOn(frame,LineColor(kGreen),LineStyle(kDashed),LineWidth(2));
// mc->GetPdf()->plotOn(frame,LineColor(kGreen),LineStyle(kDashed),LineWidth(2),Slice(*channelCat,tt->GetName()),ProjWData(*data));
//pdftmp->plotOn(frame,LineColor(kGreen),LineStyle(kDashed),LineWidth(2),Slice(*channelCat,tt->GetName()),ProjWData(*data));
normCount = pdftmp->expectedEvents(*obs);
pdftmp->plotOn(frame,LineWidth(2.),LineColor(kGreen),LineStyle(kDashed),Normalization(normCount,RooAbsReal::NumEvent)) ;
// set them back to normal
if(strcmp(var->GetName(),"Lumi")==0){
cout <<"working on lumi"<<endl;
var->setVal(w->var("nominalLumi")->getVal());
var->Print();
} else{
var->setVal(0);
}
list->Add(frame);
// quit making plots
++nPlots;
frame->Draw();
c2->SaveAs(Form("%s_%s_%s.pdf",tt->GetName(),obs->GetName(),var->GetName()));
delete c2;
}
}
}
// -------------------------------------------------------
// now make plots
TCanvas* c1 = new TCanvas("c1","ProfileInspectorDemo",800,200);
if(list->GetSize()>4){
double n = list->GetSize();
int nx = (int)sqrt(n) ;
int ny = TMath::CeilNint(n/nx);
nx = TMath::CeilNint( sqrt(n) );
c1->Divide(ny,nx);
} else
c1->Divide(list->GetSize());
for(int i=0; i<list->GetSize(); ++i){
c1->cd(i+1);
list->At(i)->Draw();
}
}