Vec2d Algebra::linesIntersection(const Settings& vars, const Vec2d &p11, const Vec2d &p12,
const Vec2d &p21, const Vec2d &p22 )
{
Line l1 = points2line(p11, p12);
Line l2 = points2line(p21, p22);
double den = l1.A * l2.B - l2.A * l1.B;
if (absolute(den) < vars.routines.Algebra_IntersectionEps)
{
Vec2d res;
res.add(p11);
res.add(p21);
res.scale(0.5); // average
return res;
}
else
{
return linesIntersection(vars, l1, l2);
}
}
Vec2d Algebra::linesIntersection( const Vec2d &p11, const Vec2d &p12,
const Vec2d &p21, const Vec2d &p22 )
{
Line l1 = points2line(p11, p12);
Line l2 = points2line(p21, p22);
double den = l1.A * l2.B - l2.A * l1.B;
//Nonstandart behaviour
if (absolute(den) < 0.01) //"Constants" ?
{
Vec2d res;
res.add(p11);
res.add(p21);
res.scale(0.5);
return res;
}
else
{
return linesIntersection(l1, l2);
}
}
void Molecule::mapLabels(const Settings& vars, std::deque<Label> &unmapped_labels )
{
double space, space2;
double bl = bondLength();
if (bl > vars.molecule.LengthValue_long)
space = vars.molecule.LengthFactor_long;
else if (bl > vars.molecule.LengthValue_medium)
space = vars.molecule.LengthFactor_medium;
else
space = vars.molecule.LengthFactor_default;
// printf("****: %lf %lf\n", bl, space);
std::vector<Skeleton::Vertex> nearest;
labels.assign(_labels.begin(), _labels.end());
for (size_t i = 0; i < labels.size(); ++i)
{
Label &l = labels[i];
#ifdef DEBUG
printf("LABELS: %d %d\n", l.rect.x, l.rect.y);
#endif
nearest.clear();
space = l.MaxSymbolWidth() * vars.molecule.SpaceMultiply;
space2 = l.rect.width < l.rect.height ? l.rect.width : l.rect.height;
for (SkeletonGraph::edge_iterator begin = _g.edgeBegin(), end = _g.edgeEnd(); begin != end; ++begin)
{
SkeletonGraph::edge_descriptor e = *begin;
if (vars.checkTimeLimit())
throw ImagoException("Timelimit exceeded");
double d1, d2;
d1 = d2 = DIST_INF;
if(_g.getDegree(e.m_source) > 1 &&
_g.getDegree(e.m_target) > 1)
continue;
if (_g.getDegree(e.m_source) == 1)
d1 = Algebra::distance2rect(_g.getVertexPosition(e.m_source), l.rect);
if (_g.getDegree(e.m_target) == 1)
d2 = Algebra::distance2rect(_g.getVertexPosition(e.m_target), l.rect);
auto v_m_target = _g.getVertexPosition(e.m_target);
auto v_m_source = _g.getVertexPosition(e.m_source);
if (d1 <= d2 && ((testCollision(v_m_target, v_m_source, l.rect) &&
testNear(v_m_source, l.rect, space)) ||
testNear(v_m_source, l.rect, space2/2)))
nearest.push_back(e.m_source);
else if (d2 < d1 && ((testCollision(v_m_source, v_m_target, l.rect) &&
testNear(v_m_target, l.rect, space)) ||
testNear(v_m_target, l.rect, space2/2)))
nearest.push_back(e.m_target);
}
for (SkeletonGraph::vertex_iterator begin = _g.vertexBegin(), end = _g.vertexEnd(); begin != end; ++begin)
{
SkeletonGraph::vertex_descriptor v = *begin;
auto v_position = _g.getVertexPosition( v);
if(_g.getDegree(v) != 2)
continue;
if(!testNear(v_position, l.rect, space2/2))
continue;
std::deque<Skeleton::Vertex> neighbors;
Skeleton::SkeletonGraph::adjacency_iterator b_e, e_e;
b_e = _g.adjacencyBegin(v);
e_e = _g.adjacencyEnd(v);
neighbors.assign(b_e, e_e);
Skeleton::Edge edge1 = _g.getEdge(neighbors[0], v).first;
Skeleton::Edge edge2 = _g.getEdge(neighbors[1], v).first;
BondType t1 = getBondType(edge1);
BondType t2 = getBondType(edge2);
if( t1 != BT_SINGLE || t2 != BT_SINGLE)
continue;
Vec2d p_v = _g.getVertexPosition(v);
Vec2d p1 = _g.getVertexPosition(neighbors[0]);
Vec2d p2 = _g.getVertexPosition(neighbors[1]);
Vec2d ap1, ap2;
ap1.diff(p1, p_v);
ap2.diff(p2, p_v);
if( testCollision(p1, p_v, l.rect) &&
testCollision(p2, p_v, l.rect) &&
testNear(p_v, l.rect, space) &&
!testNear( p1, l.rect, space) &&
!testNear( p2, l.rect, space) )
{
removeBond(edge1);
Vertex v_d = addVertex(p_v);
addBond(neighbors[0], v_d, BT_SINGLE, true);
nearest.push_back(v_d);
nearest.push_back(v);
}
}
size_t s = nearest.size();
if (s == 0)
{
unmapped_labels.push_back(l);
continue;
}
if (s == 1)
{
_mapping[nearest[0]] = &l;
continue;
}
Vec2d middle;
for (int j = 0; j < s; j++)
{
for (int k = j + 1; k < s; k++)
{
if (vars.checkTimeLimit())
throw ImagoException("Timelimit exceeded");
Skeleton::Vertex a, b;
Skeleton::Vertex c, d;
a = nearest[j];
b = nearest[k];
c = *_g.adjacencyBegin(a);
d = *_g.adjacencyBegin(b);
Vec2d n1, n2;
Vec2d v_a, v_b, v_c, v_d;
v_a = _g.getVertexPosition(a);
v_b = _g.getVertexPosition(b);
v_c = _g.getVertexPosition(c);
v_d = _g.getVertexPosition(d);
n1.diff(v_a, v_c);
n2.diff(v_b, v_d);
Vec2d m;
double ang = Vec2d::angle(n1, n2);
if (fabs(ang) < vars.molecule.AngleTreshold ||
fabs(ang - PI) < vars.molecule.AngleTreshold )
{
m.middle(v_a, v_b);
}
else
{
m.copy(Algebra::linesIntersection(vars, v_a, v_c, v_b, v_d));
}
middle.add(m);
}
}
middle.scale(2.0 / (s * (s - 1)));
Vertex newVertex = addVertex(middle);
for (int j = 0; j < s; j++)
{
Vertex e = nearest[j];
Vertex b = *_g.adjacencyBegin(e);
Edge bond = _g.getEdge(e, b).first;
BondType t = _g.getEdgeBond(bond).type;
_g.removeEdge(bond);
_g.removeVertex(e);
addBond(b, newVertex, t);
}
_mapping[newVertex] = &l;
}
std::deque<Skeleton::Vertex> deck;
//Removing dots without labels
for (SkeletonGraph::vertex_iterator begin = _g.vertexBegin(), end = _g.vertexEnd(); begin != end; ++begin)
{
SkeletonGraph::vertex_descriptor v = *begin;
if (_g.getDegree(v) == 0 && _mapping.find(v) == _mapping.end())
deck.push_back(v);
}
for (Skeleton::Vertex v : deck)
_g.removeVertex(v);
}
