MantidQt::SliceViewer::PeakBoundingBox getPeakBoundingBoxForEllipsoid(
    const std::vector<Mantid::Kernel::V3D> &directions,
    const std::vector<double> &radii,
    const Mantid::Kernel::V3D &originEllipsoid) {
  // Get the length of largest projection onto x,y,z
  auto projectionLengths = getProjectionLengths(directions, radii);

  using namespace MantidQt::SliceViewer;

  // Corners
  EllipsoidPlaneSliceCalculator calc;
  auto zoomOutFactor = calc.getZoomOutFactor();
  const double leftValue =
      originEllipsoid.X() - zoomOutFactor * projectionLengths[0];
  const double rightValue =
      originEllipsoid.X() + zoomOutFactor * projectionLengths[0];
  const double bottomValue =
      originEllipsoid.Y() - zoomOutFactor * projectionLengths[1];
  const double topValue =
      originEllipsoid.Y() + zoomOutFactor * projectionLengths[1];

  Left left(leftValue);
  Right right(rightValue);
  Bottom bottom(bottomValue);
  Top top(topValue);
  SlicePoint slicePoint(originEllipsoid.Z());

  return PeakBoundingBox(left, right, top, bottom, slicePoint);
}
SliceEllipseInfo EllipsoidPlaneSliceCalculator::getSolutionForEllipsoid(
    const Kernel::Matrix<double> &m, double zPlane,
    Mantid::Kernel::V3D originEllipsoid) const {
  // Shift the z value into a suitable frame
  const double z = zPlane - originEllipsoid.Z();

  // Setup the A matrix
  Mantid::Kernel::DblMatrix A;
  A.setMem(2, 2);
  const std::vector<double> ARow0 = {m[0][0], m[0][1]};
  const std::vector<double> ARow1 = {m[0][1], m[1][1]};
  A.setRow(0, ARow0);
  A.setRow(1, ARow1);

  // Setup the inverse Matrix of A
  Mantid::Kernel::DblMatrix AInverse;
  const double detA = A.determinant();
  AInverse.setMem(2, 2);
  const std::vector<double> AInverseRow0 = {m[1][1] / detA, -m[0][1] / detA};
  const std::vector<double> AInverseRow1 = {-m[0][1] / detA, m[0][0] / detA};
  AInverse.setRow(0, AInverseRow0);
  AInverse.setRow(1, AInverseRow1);

  // Setup the B vector
  Mantid::Kernel::DblMatrix B;
  std::vector<double> BColumn = {m[0][2], m[1][2]};
  B.setMem(2, 1);
  B.setColumn(0, BColumn);
  B *= 2 * z;

  // Setip the Transpose B vector
  Mantid::Kernel::DblMatrix BT;
  std::vector<double> BTRow = {m[0][2], m[1][2]};
  BT.setMem(1, 2);
  BT.setRow(0, BTRow);
  BT *= 2 * z;

  // Setup the C factor
  const double c = m[2][2] * std::pow(z, 2);

  // Get the origin
  const auto origin = getOrigin(AInverse, B, originEllipsoid, z);

  // Get the radii + directions
  const auto eigenSystem = getAxesInformation(A, AInverse, B, BT, c);

  // Get angle. If we have a circle then the angle is 0 (we want to avoid a
  // divergence here)
  const auto isCircle = checkIfIsCircle(m);
  const double angle = isCircle ? 0.0 : getAngle(eigenSystem.majorAxis);

  return SliceEllipseInfo(origin, eigenSystem.majorRadius,
                          eigenSystem.minorRadius, angle);
}
예제 #3
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/**
* Implementation of rendering Sample.
*/
void SampleActor::draw(bool picking) const {
  if (!picking && isVisible()) {
    OpenGLError::check("SampleActor::draw()");
    glPushAttrib(GL_ENABLE_BIT);
    GLboolean hasLight0;
    glGetBooleanv(GL_LIGHT0, &hasLight0);
    if (hasLight0) {
      glEnable(GL_LIGHTING);
    }
    glPushMatrix();
    m_color.paint();
    Mantid::Kernel::V3D pos = m_samplePos->getPos();
    glTranslated(pos.X(), pos.Y(), pos.Z());
    m_sample.getShape().draw();
    glPopMatrix();
    glPopAttrib();
    OpenGLError::check("SampleActor::draw()");
  }
}
/**
 * Check if a cut with the ellipsoid is possible at all
 * @param directions: the three ellipsoid directions
 * @param radii: the ellipsoid radii
 * @param originEllipsoid: the origin of the ellipsoid
 * @param zPlane: the z plane value
 * @return true if the a cut exists, else false
 */
bool checkIfCutExists(const std::vector<Mantid::Kernel::V3D> &directions,
                      const std::vector<double> &radii,
                      const Mantid::Kernel::V3D &originEllipsoid,
                      double zPlane) {
  // Translate into ellipsoid
  const double z = zPlane - originEllipsoid.Z();

  bool hasCut = false;
  // For each axis check if the z point is between the z values of the
  // axis endpoints
  int counter = 0;
  for (const auto &direction : directions) {
    const auto endpoint1 = direction[2] * radii[counter];
    const auto endpoint2 = -1 * direction[2] * radii[counter];

    if (isBetweenEndpoints(endpoint1, endpoint2, z)) {
      hasCut = true;
      break;
    }
    ++counter;
  }

  return hasCut;
}
    void QPeaksTableModel::updateDataCache(const Mantid::Geometry::IPeak& peak, const int row) const
    {
      // if the index is what is already cached just return
      if (row == m_dataCachePeakIndex)
        return;

      // generate the cache
      m_dataCache.clear();
      m_dataCache.push_back(QString::number(peak.getRunNumber()));
      m_dataCache.push_back(QString::number(peak.getDetectorID()));
      m_dataCache.push_back(QString::number(peak.getH(), 'f', m_hklPrec));
      m_dataCache.push_back(QString::number(peak.getK(), 'f', m_hklPrec));
      m_dataCache.push_back(QString::number(peak.getL(), 'f', m_hklPrec));
      m_dataCache.push_back(QString::number(peak.getWavelength(), 'f', 4));
      double eI = peak.getInitialEnergy();
      double eF = peak.getFinalEnergy();
      m_dataCache.push_back(QString::number(eI, 'f', 4));
      m_dataCache.push_back(QString::number(eF, 'f', 4));
      m_dataCache.push_back(QString::number(eI - eF, 'f', 4));
      m_dataCache.push_back(QString::number(peak.getTOF(), 'f', 1));
      m_dataCache.push_back(QString::number(peak.getDSpacing(), 'f', 4));
      double intensity = peak.getIntensity();
      double sigma = peak.getSigmaIntensity();
      m_dataCache.push_back(QString::number(intensity, 'f', 1));
      m_dataCache.push_back(QString::number(sigma, 'f', 1));
      m_dataCache.push_back(QString::number(intensity/sigma, 'f', 2));
      m_dataCache.push_back(QString::number(peak.getBinCount(), 'g', 2));
      m_dataCache.push_back(QString(peak.getBankName().c_str()));
      m_dataCache.push_back(QString::number(peak.getRow()));
      m_dataCache.push_back(QString::number(peak.getCol()));

      const QString COMMA(",");

      const Mantid::Kernel::V3D qlab = peak.getQLabFrame();
      m_dataCache.push_back(QString::number(qlab.X(), 'f', 4) + COMMA + QString::number(qlab.Y(), 'f', 4) + COMMA + QString::number(qlab.Z(), 'f', 4));

      const Mantid::Kernel::V3D qsample = peak.getQSampleFrame();
      m_dataCache.push_back(QString::number(qsample.X(), 'f', 4) + COMMA + QString::number(qsample.Y(), 'f', 4) + COMMA + QString::number(qsample.Z(), 'f', 4));
    }
예제 #6
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void InstrumentWindowPickTab::updateSelectionInfo(int detid)
{
  if (m_instrWindow->blocked()) 
  {
    m_selectionInfoDisplay->clear();
    return;
  }
  if (detid >= 0)
  {
    InstrumentActor* instrActor = m_instrWindow->getInstrumentActor();
    Mantid::Geometry::IDetector_const_sptr det = instrActor->getInstrument()->getDetector(detid);
    QString text = "Selected detector: " + QString::fromStdString(det->getName()) + "\n";
    text += "Detector ID: " + QString::number(detid) + '\n';
    QString wsIndex;
    try {
      wsIndex = QString::number(instrActor->getWorkspaceIndex(detid));
      updatePlot(detid); // Update the plot if the detector links to some data
    } catch (Mantid::Kernel::Exception::NotFoundError) {
      // Detector doesn't have a workspace index relating to it
      wsIndex = "None";
      m_plot->clearCurve(); // Clear the plot window
      m_plot->replot();
    }
    text += "Workspace index: " + wsIndex + '\n';
    Mantid::Kernel::V3D pos = det->getPos();
    text += "xyz: " + QString::number(pos.X()) + "," + QString::number(pos.Y()) + "," + QString::number(pos.Z())  + '\n';
    double r,t,p;
    pos.getSpherical(r,t,p);
    text += "rtp: " + QString::number(r) + "," + QString::number(t) + "," + QString::number(p)  + '\n';
    Mantid::Geometry::ICompAssembly_const_sptr parent = boost::dynamic_pointer_cast<const Mantid::Geometry::ICompAssembly>(det->getParent());
    if (parent)
    {
      QString textpath;
      while (parent)
      {
        textpath="/"+QString::fromStdString(parent->getName())+textpath;
        parent=boost::dynamic_pointer_cast<const Mantid::Geometry::ICompAssembly>(parent->getParent());
      }
      text += "Component path:" +textpath+"/"+ QString::fromStdString(det->getName()) +'\n';
    }
    const double integrated = instrActor->getIntegratedCounts(detid);
    const QString counts = integrated == -1.0 ? "N/A" : QString::number(integrated);
    text += "Counts: " + counts + '\n';
    m_selectionInfoDisplay->setText(text);
  }
  else
  {
    m_selectionInfoDisplay->clear();
    m_plot->clearCurve(); // Clear the plot window
    m_plot->replot();
  }
}
예제 #7
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/**
 * Update the info window with information for a selected detector.
 * @param detid :: ID of the selected detector.
 */
void InstrumentWindowPickTab::updateSelectionInfo(int detid)
{
    if (m_freezePlot)
    {   // freeze the plot for one update
        m_freezePlot = false;
        return;
    }
    if (m_instrWindow->blocked())
    {
        m_selectionInfoDisplay->clear();
        return;
    }
    if (detid >= 0)
    {
        InstrumentActor* instrActor = m_instrWindow->getInstrumentActor();
        Mantid::Geometry::IDetector_const_sptr det = instrActor->getInstrument()->getDetector(detid);
        QString text = "Selected detector: " + QString::fromStdString(det->getName()) + "\n";
        text += "Detector ID: " + QString::number(detid) + '\n';
        QString wsIndex;
        try {
            wsIndex = QString::number(instrActor->getWorkspaceIndex(detid));
            updatePlot(detid); // Update the plot if the detector links to some data
        } catch (Mantid::Kernel::Exception::NotFoundError &) {
            // Detector doesn't have a workspace index relating to it
            wsIndex = "None";
            m_plot->clearCurve(); // Clear the plot window
            m_plot->replot();
        }
        text += "Workspace index: " + wsIndex + '\n';
        Mantid::Kernel::V3D pos = det->getPos();
        text += "xyz: " + QString::number(pos.X()) + "," + QString::number(pos.Y()) + "," + QString::number(pos.Z())  + '\n';
        double r,t,p;
        pos.getSpherical(r,t,p);
        text += "rtp: " + QString::number(r) + "," + QString::number(t) + "," + QString::number(p)  + '\n';
        Mantid::Geometry::ICompAssembly_const_sptr parent = boost::dynamic_pointer_cast<const Mantid::Geometry::ICompAssembly>(det->getParent());
        if (parent)
        {
            QString textpath;
            while (parent)
            {
                textpath="/"+QString::fromStdString(parent->getName())+textpath;
                parent=boost::dynamic_pointer_cast<const Mantid::Geometry::ICompAssembly>(parent->getParent());
            }
            text += "Component path:" +textpath+"/"+ QString::fromStdString(det->getName()) +'\n';
        }
        const double integrated = instrActor->getIntegratedCounts(detid);
        const QString counts = integrated == -1.0 ? "N/A" : QString::number(integrated);
        text += "Counts: " + counts + '\n';
        QString xUnits;
        if (m_selectionType > SingleDetectorSelection && !m_plotSum)
        {
            switch(m_tubeXUnits)
            {
            case DETECTOR_ID:
                xUnits = "Detector ID";
                break;
            case LENGTH:
                xUnits = "Length";
                break;
            case PHI:
                xUnits = "Phi";
                break;
            default:
                xUnits = "Detector ID";
            }
        }
        else
        {
            xUnits = QString::fromStdString(instrActor->getWorkspace()->getAxis(0)->unit()->caption());
            //xUnits = "Time of flight";
        }
        text += "X units: " + xUnits + '\n';
        m_selectionInfoDisplay->setText(text);
    }
    else
    {
        m_selectionInfoDisplay->clear();
        m_plot->clearCurve(); // Clear the plot window
        m_plot->replot();
    }
}