Exemplo n.º 1
0
/*************************************************************************
* This function is the entry point of refinement
**************************************************************************/
void Refine2Way(CtrlType *ctrl, GraphType *orggraph, GraphType *graph, int *tpwgts, float ubfactor)
{

  IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->UncoarsenTmr));

  /* Compute the parameters of the coarsest graph */
  Compute2WayPartitionParams(ctrl, graph);

  for (;;) {
    ASSERT(CheckBnd(graph));

    IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->RefTmr));
    switch (ctrl->RType) {
      case 1:
        Balance2Way(ctrl, graph, tpwgts, ubfactor);
        FM_2WayEdgeRefine(ctrl, graph, tpwgts, 8); 
        break;
      default:
        errexit("Unknown refinement type: %d\n", ctrl->RType);
    }
    IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->RefTmr));

    if (graph == orggraph)
      break;

    graph = graph->finer;
    IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->ProjectTmr));
    Project2WayPartition(ctrl, graph);
    IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->ProjectTmr));
  }

  IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->UncoarsenTmr));
}
Exemplo n.º 2
0
void Refine2Way(ctrl_t *ctrl, graph_t *orggraph, graph_t *graph, real_t *tpwgts)
{

  IFSET(ctrl->dbglvl, METIS_DBG_TIME, gk_startcputimer(ctrl->UncoarsenTmr));

  /* Compute the parameters of the coarsest graph */
  Compute2WayPartitionParams(ctrl, graph);

  for (;;) {
    ASSERT(CheckBnd(graph));

    IFSET(ctrl->dbglvl, METIS_DBG_TIME, gk_startcputimer(ctrl->RefTmr));

    Balance2Way(ctrl, graph, tpwgts);

    FM_2WayRefine(ctrl, graph, tpwgts, ctrl->niter); 

    IFSET(ctrl->dbglvl, METIS_DBG_TIME, gk_stopcputimer(ctrl->RefTmr));

    if (graph == orggraph)
      break;

    graph = graph->finer;
    IFSET(ctrl->dbglvl, METIS_DBG_TIME, gk_startcputimer(ctrl->ProjectTmr));
    Project2WayPartition(ctrl, graph);
    IFSET(ctrl->dbglvl, METIS_DBG_TIME, gk_stopcputimer(ctrl->ProjectTmr));
  }

  IFSET(ctrl->dbglvl, METIS_DBG_TIME, gk_stopcputimer(ctrl->UncoarsenTmr));
}
Exemplo n.º 3
0
/*************************************************************************
* This function performs multilevel bisection
**************************************************************************/
void MlevelNodeBisection(CtrlType *ctrl, GraphType *graph, int *tpwgts, float ubfactor)
{
  GraphType *cgraph;

  ctrl->CoarsenTo = graph->nvtxs/8;
  if (ctrl->CoarsenTo > 100)
    ctrl->CoarsenTo = 100;
  else if (ctrl->CoarsenTo < 40)
    ctrl->CoarsenTo = 40;
  ctrl->maxvwgt = 1.5*((tpwgts[0]+tpwgts[1])/ctrl->CoarsenTo);

  cgraph = Coarsen2Way(ctrl, graph);

  switch (ctrl->IType) {
    case IPART_GGPKL:
      Init2WayPartition(ctrl, cgraph, tpwgts, ubfactor);

      IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->SepTmr));

      Compute2WayPartitionParams(ctrl, cgraph);
      ConstructSeparator(ctrl, cgraph, ubfactor);

      IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->SepTmr));
      break;
    case IPART_GGPKLNODE:
      InitSeparator(ctrl, cgraph, ubfactor);
      break;
  }

  Refine2WayNode(ctrl, graph, cgraph, ubfactor);

}
void GrowBisectionNode2(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts, 
         idx_t niparts)
{
  idx_t i, j, k, nvtxs, bestcut=0, mincut, inbfs;
  idx_t *xadj, *where, *bndind, *bestwhere;

  WCOREPUSH;

  nvtxs  = graph->nvtxs;
  xadj   = graph->xadj;

  /* Allocate refinement memory. Allocate sufficient memory for both edge and node */
  graph->pwgts  = imalloc(3, "GrowBisectionNode: pwgts");
  graph->where  = imalloc(nvtxs, "GrowBisectionNode: where");
  graph->bndptr = imalloc(nvtxs, "GrowBisectionNode: bndptr");
  graph->bndind = imalloc(nvtxs, "GrowBisectionNode: bndind");
  graph->id     = imalloc(nvtxs, "GrowBisectionNode: id");
  graph->ed     = imalloc(nvtxs, "GrowBisectionNode: ed");
  graph->nrinfo = (nrinfo_t *)gk_malloc(nvtxs*sizeof(nrinfo_t), "GrowBisectionNode: nrinfo");
  
  bestwhere = iwspacemalloc(ctrl, nvtxs);

  where  = graph->where;
  bndind = graph->bndind;

  for (inbfs=0; inbfs<niparts; inbfs++) {
    iset(nvtxs, 1, where);
    if (inbfs > 0)
      where[irandInRange(nvtxs)] = 0;

    Compute2WayPartitionParams(ctrl, graph);
    General2WayBalance(ctrl, graph, ntpwgts);
    FM_2WayRefine(ctrl, graph, ntpwgts, ctrl->niter);

    /* Construct and refine the vertex separator */
    for (i=0; i<graph->nbnd; i++) {
      j = bndind[i];
      if (xadj[j+1]-xadj[j] > 0) /* ignore islands */
        where[j] = 2;
    }

    Compute2WayNodePartitionParams(ctrl, graph); 
    FM_2WayNodeRefine2Sided(ctrl, graph, 4);

    /*
    printf("ISep: [%"PRIDX" %"PRIDX" %"PRIDX" %"PRIDX"] %"PRIDX"\n", 
        inbfs, graph->pwgts[0], graph->pwgts[1], graph->pwgts[2], bestcut); 
    */

    if (inbfs == 0 || bestcut > graph->mincut) {
      bestcut = graph->mincut;
      icopy(nvtxs, where, bestwhere);
    }
  }

  graph->mincut = bestcut;
  icopy(nvtxs, bestwhere, where);

  WCOREPOP;
}
void McRandomBisection(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts, 
         idx_t niparts)
{
  idx_t i, ii, j, k, nvtxs, ncon, from, bestcut=0, mincut, inbfs, qnum;
  idx_t *bestwhere, *where, *perm, *counts;
  idx_t *vwgt;

  WCOREPUSH;

  nvtxs = graph->nvtxs;
  ncon  = graph->ncon;
  vwgt  = graph->vwgt;

  Allocate2WayPartitionMemory(ctrl, graph);
  where = graph->where;

  bestwhere = iwspacemalloc(ctrl, nvtxs);
  perm      = iwspacemalloc(ctrl, nvtxs);
  counts    = iwspacemalloc(ctrl, ncon);

  for (inbfs=0; inbfs<2*niparts; inbfs++) {
    irandArrayPermute(nvtxs, perm, nvtxs/2, 1);
    iset(ncon, 0, counts);

    /* partition by spliting the queues randomly */
    for (ii=0; ii<nvtxs; ii++) {
      i        = perm[ii];
      qnum     = iargmax(ncon, vwgt+i*ncon);
      where[i] = (counts[qnum]++)%2;
    }

    Compute2WayPartitionParams(ctrl, graph);

    FM_2WayRefine(ctrl, graph, ntpwgts, ctrl->niter);
    Balance2Way(ctrl, graph, ntpwgts);
    FM_2WayRefine(ctrl, graph, ntpwgts, ctrl->niter);
    Balance2Way(ctrl, graph, ntpwgts);
    FM_2WayRefine(ctrl, graph, ntpwgts, ctrl->niter);

    if (inbfs == 0 || bestcut >= graph->mincut) {
      bestcut = graph->mincut;
      icopy(nvtxs, where, bestwhere);
      if (bestcut == 0)
        break;
    }
  }

  graph->mincut = bestcut;
  icopy(nvtxs, bestwhere, where);

  WCOREPOP;
}
void InitSeparator(ctrl_t *ctrl, graph_t *graph, idx_t niparts) 
{
  real_t ntpwgts[2] = {0.5, 0.5};
  mdbglvl_et dbglvl;

  dbglvl = ctrl->dbglvl;
  IFSET(ctrl->dbglvl, METIS_DBG_REFINE, ctrl->dbglvl -= METIS_DBG_REFINE);
  IFSET(ctrl->dbglvl, METIS_DBG_MOVEINFO, ctrl->dbglvl -= METIS_DBG_MOVEINFO);

  IFSET(ctrl->dbglvl, METIS_DBG_TIME, gk_startcputimer(ctrl->InitPartTmr));

  /* this is required for the cut-based part of the refinement */
  Setup2WayBalMultipliers(ctrl, graph, ntpwgts);

  switch (ctrl->iptype) {
    case METIS_IPTYPE_EDGE:
      if (graph->nedges == 0)
        RandomBisection(ctrl, graph, ntpwgts, niparts);
      else
        GrowBisection(ctrl, graph, ntpwgts, niparts);

      Compute2WayPartitionParams(ctrl, graph);
      ConstructSeparator(ctrl, graph);
      break;

    case METIS_IPTYPE_NODE:
      GrowBisectionNode(ctrl, graph, ntpwgts, niparts);
      break;

    default:
      gk_errexit(SIGERR, "Unkown iptype of %"PRIDX"\n", ctrl->iptype);
  }

  IFSET(ctrl->dbglvl, METIS_DBG_IPART, printf("Initial Sep: %"PRIDX"\n", graph->mincut));
  IFSET(ctrl->dbglvl, METIS_DBG_TIME, gk_stopcputimer(ctrl->InitPartTmr));

  ctrl->dbglvl = dbglvl;

}
void McGrowBisection(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts, 
         idx_t niparts)
{
  idx_t i, j, k, nvtxs, ncon, from, bestcut=0, mincut, inbfs;
  idx_t *bestwhere, *where;

  WCOREPUSH;

  nvtxs = graph->nvtxs;

  Allocate2WayPartitionMemory(ctrl, graph);
  where = graph->where;

  bestwhere = iwspacemalloc(ctrl, nvtxs);

  for (inbfs=0; inbfs<2*niparts; inbfs++) {
    iset(nvtxs, 1, where);
    where[irandInRange(nvtxs)] = 0;

    Compute2WayPartitionParams(ctrl, graph);

    Balance2Way(ctrl, graph, ntpwgts);
    FM_2WayRefine(ctrl, graph, ntpwgts, ctrl->niter);
    Balance2Way(ctrl, graph, ntpwgts);
    FM_2WayRefine(ctrl, graph, ntpwgts, ctrl->niter);

    if (inbfs == 0 || bestcut >= graph->mincut) {
      bestcut = graph->mincut;
      icopy(nvtxs, where, bestwhere);
      if (bestcut == 0)
        break;
    }
  }

  graph->mincut = bestcut;
  icopy(nvtxs, bestwhere, where);

  WCOREPOP;
}
Exemplo n.º 8
0
/*************************************************************************
* This function takes a graph and produces a bisection by using a region
* growing algorithm. The resulting partition is returned in
* graph->where
**************************************************************************/
void GrowBisection(CtrlType *ctrl, GraphType *graph, int *tpwgts, float ubfactor)
{
  int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs;
  idxtype *xadj, *vwgt, *adjncy, *adjwgt, *where;
  idxtype *queue, *touched, *gain, *bestwhere;


  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  vwgt = graph->vwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;

  Allocate2WayPartitionMemory(ctrl, graph);
  where = graph->where;

  bestwhere = idxmalloc(nvtxs, "BisectGraph: bestwhere");
  queue = idxmalloc(nvtxs, "BisectGraph: queue");
  touched = idxmalloc(nvtxs, "BisectGraph: touched");

  ASSERTP(tpwgts[0]+tpwgts[1] == idxsum(nvtxs, vwgt), ("%d %d\n", tpwgts[0]+tpwgts[1], idxsum(nvtxs, vwgt)));

  maxpwgt[0] = ubfactor*tpwgts[0];
  maxpwgt[1] = ubfactor*tpwgts[1];
  minpwgt[0] = (1.0/ubfactor)*tpwgts[0];
  minpwgt[1] = (1.0/ubfactor)*tpwgts[1];

  nbfs = (nvtxs <= ctrl->CoarsenTo ? SMALLNIPARTS : LARGENIPARTS);
  bestcut = idxsum(nvtxs, graph->adjwgtsum)+1;  /* The +1 is for the 0 edges case */
  for (; nbfs>0; nbfs--) {
    idxset(nvtxs, 0, touched);

    pwgts[1] = tpwgts[0]+tpwgts[1];
    pwgts[0] = 0;

    idxset(nvtxs, 1, where);

    queue[0] = RandomInRange(nvtxs);
    touched[queue[0]] = 1;
    first = 0; last = 1;
    nleft = nvtxs-1;
    drain = 0;

    /* Start the BFS from queue to get a partition */
    for (;;) {
      if (first == last) { /* Empty. Disconnected graph! */
        if (nleft == 0 || drain)
          break;

        k = RandomInRange(nleft);
        for (i=0; i<nvtxs; i++) {
          if (touched[i] == 0) {
            if (k == 0)
              break;
            else
              k--;
          }
        }

        queue[0] = i;
        touched[i] = 1;
        first = 0; last = 1;;
        nleft--;
      }

      i = queue[first++];
      if (pwgts[0] > 0 && pwgts[1]-vwgt[i] < minpwgt[1]) {
        drain = 1;
        continue;
      }

      where[i] = 0;
      INC_DEC(pwgts[0], pwgts[1], vwgt[i]);
      if (pwgts[1] <= maxpwgt[1])
        break;

      drain = 0;
      for (j=xadj[i]; j<xadj[i+1]; j++) {
        k = adjncy[j];
        if (touched[k] == 0) {
          queue[last++] = k;
          touched[k] = 1;
          nleft--;
        }
      }
    }

    /* Check to see if we hit any bad limiting cases */
    if (pwgts[1] == 0) { 
      i = RandomInRange(nvtxs);
      where[i] = 1;
      INC_DEC(pwgts[1], pwgts[0], vwgt[i]);
    }

    /*************************************************************
    * Do some partition refinement 
    **************************************************************/
    Compute2WayPartitionParams(ctrl, graph);
    /*printf("IPART: %3d [%5d %5d] [%5d %5d] %5d\n", graph->nvtxs, pwgts[0], pwgts[1], graph->pwgts[0], graph->pwgts[1], graph->mincut); */

    Balance2Way(ctrl, graph, tpwgts, ubfactor);
    /*printf("BPART: [%5d %5d] %5d\n", graph->pwgts[0], graph->pwgts[1], graph->mincut);*/

    FM_2WayEdgeRefine(ctrl, graph, tpwgts, 4);
    /*printf("RPART: [%5d %5d] %5d\n", graph->pwgts[0], graph->pwgts[1], graph->mincut);*/

    if (bestcut > graph->mincut) {
      bestcut = graph->mincut;
      idxcopy(nvtxs, where, bestwhere);
      if (bestcut == 0)
        break;
    }
  }

  graph->mincut = bestcut;
  idxcopy(nvtxs, bestwhere, where);

  GKfree(&bestwhere, &queue, &touched, LTERM);
}
Exemplo n.º 9
0
/*************************************************************************
* This function takes a graph and produces a bisection by using a region
* growing algorithm. The resulting partition is returned in
* graph->where
**************************************************************************/
void RandomBisection(CtrlType *ctrl, GraphType *graph, int *tpwgts, float ubfactor)
{
  int i, ii, j, k, nvtxs, pwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs;
  idxtype *xadj, *vwgt, *adjncy, *adjwgt, *where;
  idxtype *perm, *bestwhere;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  vwgt = graph->vwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;

  Allocate2WayPartitionMemory(ctrl, graph);
  where = graph->where;

  bestwhere = idxmalloc(nvtxs, "BisectGraph: bestwhere");
  perm = idxmalloc(nvtxs, "BisectGraph: queue");

  ASSERTP(tpwgts[0]+tpwgts[1] == idxsum(nvtxs, vwgt), ("%d %d\n", tpwgts[0]+tpwgts[1], idxsum(nvtxs, vwgt)));

  maxpwgt[0] = ubfactor*tpwgts[0];
  maxpwgt[1] = ubfactor*tpwgts[1];
  minpwgt[0] = (1.0/ubfactor)*tpwgts[0];
  minpwgt[1] = (1.0/ubfactor)*tpwgts[1];

  nbfs = (nvtxs <= ctrl->CoarsenTo ? SMALLNIPARTS : LARGENIPARTS);
  bestcut = idxsum(nvtxs, graph->adjwgtsum)+1;  /* The +1 is for the 0 edges case */
  for (; nbfs>0; nbfs--) {
    RandomPermute(nvtxs, perm, 1);

    idxset(nvtxs, 1, where);
    pwgts[1] = tpwgts[0]+tpwgts[1];
    pwgts[0] = 0;


    if (nbfs != 1) {
      for (ii=0; ii<nvtxs; ii++) {
        i = perm[ii];
        if (pwgts[0]+vwgt[i] < maxpwgt[0]) {
          where[i] = 0;
          pwgts[0] += vwgt[i];
          pwgts[1] -= vwgt[i];
          if (pwgts[0] > minpwgt[0])
            break;
        }
      }
    }

    /*************************************************************
    * Do some partition refinement 
    **************************************************************/
    Compute2WayPartitionParams(ctrl, graph);
    /* printf("IPART: %3d [%5d %5d] [%5d %5d] %5d\n", graph->nvtxs, pwgts[0], pwgts[1], graph->pwgts[0], graph->pwgts[1], graph->mincut); */

    Balance2Way(ctrl, graph, tpwgts, ubfactor);
    /* printf("BPART: [%5d %5d] %5d\n", graph->pwgts[0], graph->pwgts[1], graph->mincut); */

    FM_2WayEdgeRefine(ctrl, graph, tpwgts, 4);
    /* printf("RPART: [%5d %5d] %5d\n", graph->pwgts[0], graph->pwgts[1], graph->mincut); */

    if (bestcut > graph->mincut) {
      bestcut = graph->mincut;
      idxcopy(nvtxs, where, bestwhere);
      if (bestcut == 0)
        break;
    }
  }

  graph->mincut = bestcut;
  idxcopy(nvtxs, bestwhere, where);

  GKfree(&bestwhere, &perm, LTERM);
}
Exemplo n.º 10
0
/*************************************************************************
* This function takes a graph and produces a bisection by using a region
* growing algorithm. The resulting partition is returned in
* graph->where
**************************************************************************/
void GrowBisectionNode(CtrlType *ctrl, GraphType *graph, float ubfactor)
{
  int i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], tpwgts[2], minpwgt[2], maxpwgt[2], from, bestcut, icut, mincut, me, pass, nbfs;
  idxtype *xadj, *vwgt, *adjncy, *adjwgt, *where, *bndind;
  idxtype *queue, *touched, *gain, *bestwhere;

  nvtxs = graph->nvtxs;
  xadj = graph->xadj;
  vwgt = graph->vwgt;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;

  bestwhere = idxmalloc(nvtxs, "BisectGraph: bestwhere");
  queue = idxmalloc(nvtxs, "BisectGraph: queue");
  touched = idxmalloc(nvtxs, "BisectGraph: touched");

  tpwgts[0] = idxsum(nvtxs, vwgt);
  tpwgts[1] = tpwgts[0]/2;
  tpwgts[0] -= tpwgts[1];

  maxpwgt[0] = ubfactor*tpwgts[0];
  maxpwgt[1] = ubfactor*tpwgts[1];
  minpwgt[0] = (1.0/ubfactor)*tpwgts[0];
  minpwgt[1] = (1.0/ubfactor)*tpwgts[1];

  /* Allocate memory for graph->rdata. Allocate sufficient memory for both edge and node */
  graph->rdata = idxmalloc(5*nvtxs+3, "GrowBisectionNode: graph->rdata");
  graph->pwgts    = graph->rdata;
  graph->where    = graph->rdata + 3;
  graph->bndptr   = graph->rdata + nvtxs + 3;
  graph->bndind   = graph->rdata + 2*nvtxs + 3;
  graph->nrinfo   = (NRInfoType *)(graph->rdata + 3*nvtxs + 3);
  graph->id       = graph->rdata + 3*nvtxs + 3;
  graph->ed       = graph->rdata + 4*nvtxs + 3;
  
  where = graph->where;
  bndind = graph->bndind;

  nbfs = (nvtxs <= ctrl->CoarsenTo ? SMALLNIPARTS : LARGENIPARTS);
  bestcut = tpwgts[0]+tpwgts[1];
  for (nbfs++; nbfs>0; nbfs--) {
    idxset(nvtxs, 0, touched);

    pwgts[1] = tpwgts[0]+tpwgts[1];
    pwgts[0] = 0;

    idxset(nvtxs, 1, where);

    queue[0] = RandomInRange(nvtxs);
    touched[queue[0]] = 1;
    first = 0; last = 1;
    nleft = nvtxs-1;
    drain = 0;

    /* Start the BFS from queue to get a partition */
    if (nbfs >= 1) {
      for (;;) {
        if (first == last) { /* Empty. Disconnected graph! */
          if (nleft == 0 || drain)
            break;
  
          k = RandomInRange(nleft);
          for (i=0; i<nvtxs; i++) {
            if (touched[i] == 0) {
              if (k == 0)
                break;
              else
                k--;
            }
          }

          queue[0] = i;
          touched[i] = 1;
          first = 0; last = 1;;
          nleft--;
        }

        i = queue[first++];
        if (pwgts[1]-vwgt[i] < minpwgt[1]) {
          drain = 1;
          continue;
        }

        where[i] = 0;
        INC_DEC(pwgts[0], pwgts[1], vwgt[i]);
        if (pwgts[1] <= maxpwgt[1])
          break;

        drain = 0;
        for (j=xadj[i]; j<xadj[i+1]; j++) {
          k = adjncy[j];
          if (touched[k] == 0) {
            queue[last++] = k;
            touched[k] = 1;
            nleft--;
          }
        }
      }
    }

    /*************************************************************
    * Do some partition refinement 
    **************************************************************/
    Compute2WayPartitionParams(ctrl, graph);
    Balance2Way(ctrl, graph, tpwgts, ubfactor);
    FM_2WayEdgeRefine(ctrl, graph, tpwgts, 4);

    /* Construct and refine the vertex separator */
    for (i=0; i<graph->nbnd; i++) 
      where[bndind[i]] = 2;

    Compute2WayNodePartitionParams(ctrl, graph); 
    FM_2WayNodeRefine(ctrl, graph, ubfactor, 6);

    /* printf("ISep: [%d %d %d] %d\n", graph->pwgts[0], graph->pwgts[1], graph->pwgts[2], bestcut); */

    if (bestcut > graph->mincut) {
      bestcut = graph->mincut;
      idxcopy(nvtxs, where, bestwhere);
    }
  }

  graph->mincut = bestcut;
  idxcopy(nvtxs, bestwhere, where);

  Compute2WayNodePartitionParams(ctrl, graph); 

  GKfree(&bestwhere, &queue, &touched, LTERM);
}
Exemplo n.º 11
0
void GrowBisectionNode(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts, 
         idx_t niparts)
{
  idx_t i, j, k, nvtxs, drain, nleft, first, last, pwgts[2], oneminpwgt, 
        onemaxpwgt, from, me, bestcut=0, icut, mincut, inbfs;
  idx_t *xadj, *vwgt, *adjncy, *where, *bndind;
  idx_t *queue, *touched, *gain, *bestwhere;

  WCOREPUSH;

  nvtxs  = graph->nvtxs;
  xadj   = graph->xadj;
  vwgt   = graph->vwgt;
  adjncy = graph->adjncy;
  //  adjwgt = graph->adjwgt;

  bestwhere = iwspacemalloc(ctrl, nvtxs);
  queue     = iwspacemalloc(ctrl, nvtxs);
  touched   = iwspacemalloc(ctrl, nvtxs);

  onemaxpwgt = ctrl->ubfactors[0]*graph->tvwgt[0]*0.5;
  oneminpwgt = (1.0/ctrl->ubfactors[0])*graph->tvwgt[0]*0.5;


  /* Allocate refinement memory. Allocate sufficient memory for both edge and node */
  graph->pwgts  = imalloc(3, "GrowBisectionNode: pwgts");
  graph->where  = imalloc(nvtxs, "GrowBisectionNode: where");
  graph->bndptr = imalloc(nvtxs, "GrowBisectionNode: bndptr");
  graph->bndind = imalloc(nvtxs, "GrowBisectionNode: bndind");
  graph->id     = imalloc(nvtxs, "GrowBisectionNode: id");
  graph->ed     = imalloc(nvtxs, "GrowBisectionNode: ed");
  graph->nrinfo = (nrinfo_t *)gk_malloc(nvtxs*sizeof(nrinfo_t), "GrowBisectionNode: nrinfo");
  
  where  = graph->where;
  bndind = graph->bndind;

  for (inbfs=0; inbfs<niparts; inbfs++) {
    iset(nvtxs, 1, where);
    iset(nvtxs, 0, touched);

    pwgts[1] = graph->tvwgt[0];
    pwgts[0] = 0;

    queue[0] = irandInRange(nvtxs);
    touched[queue[0]] = 1;
    first = 0; last = 1;
    nleft = nvtxs-1;
    drain = 0;

    /* Start the BFS from queue to get a partition */
    for (;;) {
      if (first == last) { /* Empty. Disconnected graph! */
        if (nleft == 0 || drain)
          break;
  
        k = irandInRange(nleft);
        for (i=0; i<nvtxs; i++) { /* select the kth untouched vertex */
          if (touched[i] == 0) {
            if (k == 0)
              break;
            else
              k--;
          }
        }

        queue[0]   = i;
        touched[i] = 1;
        first      = 0; 
        last       = 1;
        nleft--;
      }

      i = queue[first++];
      if (pwgts[1]-vwgt[i] < oneminpwgt) {
        drain = 1;
        continue;
      }

      where[i] = 0;
      INC_DEC(pwgts[0], pwgts[1], vwgt[i]);
      if (pwgts[1] <= onemaxpwgt)
        break;

      drain = 0;
      for (j=xadj[i]; j<xadj[i+1]; j++) {
        k = adjncy[j];
        if (touched[k] == 0) {
          queue[last++] = k;
          touched[k] = 1;
          nleft--;
        }
      }
    }

    /*************************************************************
    * Do some partition refinement 
    **************************************************************/
    Compute2WayPartitionParams(ctrl, graph);
    Balance2Way(ctrl, graph, ntpwgts);
    FM_2WayRefine(ctrl, graph, ntpwgts, 4);

    /* Construct and refine the vertex separator */
    for (i=0; i<graph->nbnd; i++) {
      j = bndind[i];
      if (xadj[j+1]-xadj[j] > 0) /* ignore islands */
        where[j] = 2;
    }

    Compute2WayNodePartitionParams(ctrl, graph); 
    FM_2WayNodeRefine2Sided(ctrl, graph, 1);
    FM_2WayNodeRefine1Sided(ctrl, graph, 4);

    /*
    printf("ISep: [%"PRIDX" %"PRIDX" %"PRIDX" %"PRIDX"] %"PRIDX"\n", 
        inbfs, graph->pwgts[0], graph->pwgts[1], graph->pwgts[2], bestcut); 
    */
    
    if (inbfs == 0 || bestcut > graph->mincut) {
      bestcut = graph->mincut;
      icopy(nvtxs, where, bestwhere);
    }
  }

  graph->mincut = bestcut;
  icopy(nvtxs, bestwhere, where);

  WCOREPOP;
}
Exemplo n.º 12
0
void GrowBisection(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts, 
         idx_t niparts)
{
  idx_t i, j, k, nvtxs, drain, nleft, first, last, 
        pwgts[2], oneminpwgt, onemaxpwgt, 
        from, me, bestcut=0, icut, mincut, inbfs;
  idx_t *xadj, *vwgt, *adjncy, *where;
  idx_t *queue, *touched, *gain, *bestwhere;

  WCOREPUSH;

  nvtxs  = graph->nvtxs;
  xadj   = graph->xadj;
  vwgt   = graph->vwgt;
  adjncy = graph->adjncy;
  //  adjwgt = graph->adjwgt;

  Allocate2WayPartitionMemory(ctrl, graph);
  where = graph->where;

  bestwhere = iwspacemalloc(ctrl, nvtxs);
  queue     = iwspacemalloc(ctrl, nvtxs);
  touched   = iwspacemalloc(ctrl, nvtxs);

  onemaxpwgt = ctrl->ubfactors[0]*graph->tvwgt[0]*ntpwgts[1];
  oneminpwgt = (1.0/ctrl->ubfactors[0])*graph->tvwgt[0]*ntpwgts[1];

  for (inbfs=0; inbfs<niparts; inbfs++) {
    iset(nvtxs, 1, where);

    iset(nvtxs, 0, touched);

    pwgts[1] = graph->tvwgt[0];
    pwgts[0] = 0;


    queue[0] = irandInRange(nvtxs);
    touched[queue[0]] = 1;
    first = 0; 
    last  = 1;
    nleft = nvtxs-1;
    drain = 0;

    /* Start the BFS from queue to get a partition */
    for (;;) {
      if (first == last) { /* Empty. Disconnected graph! */
        if (nleft == 0 || drain)
          break;

        k = irandInRange(nleft);
        for (i=0; i<nvtxs; i++) {
          if (touched[i] == 0) {
            if (k == 0)
              break;
            else
              k--;
          }
        }

        queue[0]   = i;
        touched[i] = 1;
        first      = 0; 
        last       = 1;
        nleft--;
      }

      i = queue[first++];
      if (pwgts[0] > 0 && pwgts[1]-vwgt[i] < oneminpwgt) {
        drain = 1;
        continue;
      }

      where[i] = 0;
      INC_DEC(pwgts[0], pwgts[1], vwgt[i]);
      if (pwgts[1] <= onemaxpwgt)
        break;

      drain = 0;
      for (j=xadj[i]; j<xadj[i+1]; j++) {
        k = adjncy[j];
        if (touched[k] == 0) {
          queue[last++] = k;
          touched[k] = 1;
          nleft--;
        }
      }
    }

    /* Check to see if we hit any bad limiting cases */
    if (pwgts[1] == 0) 
      where[irandInRange(nvtxs)] = 1;
    if (pwgts[0] == 0) 
      where[irandInRange(nvtxs)] = 0;

    /*************************************************************
    * Do some partition refinement 
    **************************************************************/
    Compute2WayPartitionParams(ctrl, graph);
    /*
    printf("IPART: %3"PRIDX" [%5"PRIDX" %5"PRIDX"] [%5"PRIDX" %5"PRIDX"] %5"PRIDX"\n", 
        graph->nvtxs, pwgts[0], pwgts[1], graph->pwgts[0], graph->pwgts[1], graph->mincut); 
    */

    Balance2Way(ctrl, graph, ntpwgts);
    /*
    printf("BPART: [%5"PRIDX" %5"PRIDX"] %5"PRIDX"\n", graph->pwgts[0],
        graph->pwgts[1], graph->mincut); 
    */

    FM_2WayRefine(ctrl, graph, ntpwgts, ctrl->niter);
    /*
    printf("RPART: [%5"PRIDX" %5"PRIDX"] %5"PRIDX"\n", graph->pwgts[0], 
        graph->pwgts[1], graph->mincut);
    */

    if (inbfs == 0 || bestcut > graph->mincut) {
      bestcut = graph->mincut;
      icopy(nvtxs, where, bestwhere);
      if (bestcut == 0)
        break;
    }
  }

  graph->mincut = bestcut;
  icopy(nvtxs, bestwhere, where);

  WCOREPOP;
}
Exemplo n.º 13
0
void RandomBisection(ctrl_t *ctrl, graph_t *graph, real_t *ntpwgts, 
         idx_t niparts)
{
  idx_t i, ii, j, k, nvtxs, pwgts[2], zeromaxpwgt, from, me, 
        bestcut=0, icut, mincut, inbfs;
  idx_t  *vwgt,  *where;
  idx_t *perm, *bestwhere;

  WCOREPUSH;

  nvtxs  = graph->nvtxs;
  //  xadj   = graph->xadj;
  vwgt   = graph->vwgt;
  //  adjncy = graph->adjncy;
  //  adjwgt = graph->adjwgt;

  Allocate2WayPartitionMemory(ctrl, graph);
  where = graph->where;

  bestwhere = iwspacemalloc(ctrl, nvtxs);
  perm      = iwspacemalloc(ctrl, nvtxs);

  zeromaxpwgt = ctrl->ubfactors[0]*graph->tvwgt[0]*ntpwgts[0];

  for (inbfs=0; inbfs<niparts; inbfs++) {
    iset(nvtxs, 1, where);

    if (inbfs > 0) {
      irandArrayPermute(nvtxs, perm, nvtxs/2, 1);
      pwgts[1] = graph->tvwgt[0];
      pwgts[0] = 0;

      for (ii=0; ii<nvtxs; ii++) {
        i = perm[ii];
        if (pwgts[0]+vwgt[i] < zeromaxpwgt) {
          where[i] = 0;
          pwgts[0] += vwgt[i];
          pwgts[1] -= vwgt[i];
          if (pwgts[0] > zeromaxpwgt)
            break;
        }
      }
    }

    /* Do some partition refinement  */
    Compute2WayPartitionParams(ctrl, graph);
    /* printf("IPART: %3"PRIDX" [%5"PRIDX" %5"PRIDX"] [%5"PRIDX" %5"PRIDX"] %5"PRIDX"\n", graph->nvtxs, pwgts[0], pwgts[1], graph->pwgts[0], graph->pwgts[1], graph->mincut); */

    Balance2Way(ctrl, graph, ntpwgts);
    /* printf("BPART: [%5"PRIDX" %5"PRIDX"] %5"PRIDX"\n", graph->pwgts[0], graph->pwgts[1], graph->mincut); */

    FM_2WayRefine(ctrl, graph, ntpwgts, 4);
    /* printf("RPART: [%5"PRIDX" %5"PRIDX"] %5"PRIDX"\n", graph->pwgts[0], graph->pwgts[1], graph->mincut); */

    if (inbfs==0 || bestcut > graph->mincut) {
      bestcut = graph->mincut;
      icopy(nvtxs, where, bestwhere);
      if (bestcut == 0)
        break;
    }
  }

  graph->mincut = bestcut;
  icopy(nvtxs, bestwhere, where);

  WCOREPOP;
}