Exemplo n.º 1
0
int Coll_scatter_mvapich2_two_level_binomial::scatter(void *sendbuf,
                                        int sendcnt,
                                        MPI_Datatype sendtype,
                                        void *recvbuf,
                                        int recvcnt,
                                        MPI_Datatype recvtype,
                                        int root, MPI_Comm comm)
{
    int comm_size, rank;
    int local_rank, local_size;
    int leader_comm_rank = -1, leader_comm_size = -1;
    int mpi_errno = MPI_SUCCESS;
    int recvtype_size, sendtype_size, nbytes;
    void *tmp_buf = NULL;
    void *leader_scatter_buf = NULL;
    MPI_Status status;
    int leader_root = -1, leader_of_root = -1;
    MPI_Comm shmem_comm, leader_comm;


    //if not set (use of the algo directly, without mvapich2 selector)
    if(MV2_Scatter_intra_function==NULL)
      MV2_Scatter_intra_function=Coll_scatter_mpich::scatter;

    if(comm->get_leaders_comm()==MPI_COMM_NULL){
      comm->init_smp();
    }
    comm_size = comm->size();
    rank = comm->rank();

    if (((rank == root) && (recvcnt == 0))
        || ((rank != root) && (sendcnt == 0))) {
        return MPI_SUCCESS;
    }

    /* extract the rank,size information for the intra-node
     * communicator */
    shmem_comm = comm->get_intra_comm();
    local_rank = shmem_comm->rank();
    local_size = shmem_comm->size();

    if (local_rank == 0) {
        /* Node leader. Extract the rank, size information for the leader
         * communicator */
        leader_comm = comm->get_leaders_comm();
        leader_comm_size = leader_comm->size();
        leader_comm_rank = leader_comm->rank();
    }

    if (local_size == comm_size) {
        /* purely intra-node scatter. Just use the direct algorithm and we are done */
        mpi_errno = MPIR_Scatter_MV2_Direct(sendbuf, sendcnt, sendtype,
                                            recvbuf, recvcnt, recvtype,
                                            root, comm);

    } else {
        recvtype_size=recvtype->size();
        sendtype_size=sendtype->size();

        if (rank == root) {
            nbytes = sendcnt * sendtype_size;
        } else {
            nbytes = recvcnt * recvtype_size;
        }

        if (local_rank == 0) {
            /* Node leader, allocate tmp_buffer */
            tmp_buf = smpi_get_tmp_sendbuffer(nbytes * local_size);
        }
        leader_comm = comm->get_leaders_comm();
        int* leaders_map = comm->get_leaders_map();
        leader_of_root = comm->group()->rank(leaders_map[root]);
        leader_root = leader_comm->group()->rank(leaders_map[root]);
        /* leader_root is the rank of the leader of the root in leader_comm.
         * leader_root is to be used as the root of the inter-leader gather ops
         */

        if ((local_rank == 0) && (root != rank)
            && (leader_of_root == rank)) {
            /* The root of the scatter operation is not the node leader. Recv
             * data from the node leader */
            leader_scatter_buf = smpi_get_tmp_sendbuffer(nbytes * comm_size);
            Request::recv(leader_scatter_buf, nbytes * comm_size, MPI_BYTE,
                             root, COLL_TAG_SCATTER, comm, &status);
        }

        if (rank == root && local_rank != 0) {
            /* The root of the scatter operation is not the node leader. Send
             * data to the node leader */
            Request::send(sendbuf, sendcnt * comm_size, sendtype,
                                     leader_of_root, COLL_TAG_SCATTER, comm);
        }

        if (leader_comm_size > 1 && local_rank == 0) {
          if (not comm->is_uniform()) {
            int* displs   = NULL;
            int* sendcnts = NULL;
            int* node_sizes;
            int i      = 0;
            node_sizes = comm->get_non_uniform_map();

            if (root != leader_of_root) {
              if (leader_comm_rank == leader_root) {
                displs      = static_cast<int*>(xbt_malloc(sizeof(int) * leader_comm_size));
                sendcnts    = static_cast<int*>(xbt_malloc(sizeof(int) * leader_comm_size));
                sendcnts[0] = node_sizes[0] * nbytes;
                displs[0]   = 0;

                for (i = 1; i < leader_comm_size; i++) {
                  displs[i]   = displs[i - 1] + node_sizes[i - 1] * nbytes;
                  sendcnts[i] = node_sizes[i] * nbytes;
                }
              }
              Colls::scatterv(leader_scatter_buf, sendcnts, displs, MPI_BYTE, tmp_buf, nbytes * local_size, MPI_BYTE,
                              leader_root, leader_comm);
            } else {
              if (leader_comm_rank == leader_root) {
                displs      = static_cast<int*>(xbt_malloc(sizeof(int) * leader_comm_size));
                sendcnts    = static_cast<int*>(xbt_malloc(sizeof(int) * leader_comm_size));
                sendcnts[0] = node_sizes[0] * sendcnt;
                displs[0]   = 0;

                for (i = 1; i < leader_comm_size; i++) {
                  displs[i]   = displs[i - 1] + node_sizes[i - 1] * sendcnt;
                  sendcnts[i] = node_sizes[i] * sendcnt;
                }
              }
              Colls::scatterv(sendbuf, sendcnts, displs, sendtype, tmp_buf, nbytes * local_size, MPI_BYTE, leader_root,
                              leader_comm);
            }
            if (leader_comm_rank == leader_root) {
              xbt_free(displs);
              xbt_free(sendcnts);
            }
            } else {
                if (leader_of_root != root) {
                    mpi_errno =
                        MPIR_Scatter_MV2_Binomial(leader_scatter_buf,
                                                  nbytes * local_size, MPI_BYTE,
                                                  tmp_buf, nbytes * local_size,
                                                  MPI_BYTE, leader_root,
                                                  leader_comm);
                } else {
                    mpi_errno =
                        MPIR_Scatter_MV2_Binomial(sendbuf, sendcnt * local_size,
                                                  sendtype, tmp_buf,
                                                  nbytes * local_size, MPI_BYTE,
                                                  leader_root, leader_comm);

                }
            }
        }
        /* The leaders are now done with the inter-leader part. Scatter the data within the nodes */

        if (rank == root && recvbuf == MPI_IN_PLACE) {
            mpi_errno = MV2_Scatter_intra_function(tmp_buf, nbytes, MPI_BYTE,
                                                (void *)sendbuf, sendcnt, sendtype,
                                                0, shmem_comm);
        } else {
            mpi_errno = MV2_Scatter_intra_function(tmp_buf, nbytes, MPI_BYTE,
                                                recvbuf, recvcnt, recvtype,
                                                0, shmem_comm);
        }

    }


    /* check if multiple threads are calling this collective function */
    if (comm_size != local_size && local_rank == 0) {
        smpi_free_tmp_buffer(tmp_buf);
        if (leader_of_root == rank && root != rank) {
            smpi_free_tmp_buffer(leader_scatter_buf);
        }
    }

    return (mpi_errno);
}
Exemplo n.º 2
0
int Coll_scatter_mvapich2::scatter(const void *sendbuf,
    int sendcnt,
    MPI_Datatype sendtype,
    void *recvbuf,
    int recvcnt,
    MPI_Datatype recvtype,
    int root, MPI_Comm comm)
{
  int range = 0, range_threshold = 0, range_threshold_intra = 0;
  int mpi_errno = MPI_SUCCESS;
  //   int mpi_errno_ret = MPI_SUCCESS;
  int rank, nbytes, comm_size;
  int partial_sub_ok = 0;
  int conf_index = 0;
     MPI_Comm shmem_comm;
  //    MPID_Comm *shmem_commptr=NULL;
  if(mv2_scatter_thresholds_table==NULL)
    init_mv2_scatter_tables_stampede();

  if(comm->get_leaders_comm()==MPI_COMM_NULL){
    comm->init_smp();
  }

  comm_size = comm->size();

  rank = comm->rank();

  if (rank == root) {
    int sendtype_size = sendtype->size();
    nbytes            = sendcnt * sendtype_size;
  } else {
    int recvtype_size = recvtype->size();
    nbytes            = recvcnt * recvtype_size;
  }

    // check if safe to use partial subscription mode
    if (comm->is_uniform()) {

        shmem_comm = comm->get_intra_comm();
        if (mv2_scatter_table_ppn_conf[0] == -1) {
            // Indicating user defined tuning
            conf_index = 0;
        }else{
          int local_size = shmem_comm->size();
          int i          = 0;
            do {
                if (local_size == mv2_scatter_table_ppn_conf[i]) {
                    conf_index = i;
                    partial_sub_ok = 1;
                    break;
                }
                i++;
            } while(i < mv2_scatter_num_ppn_conf);
        }
    }

  if (partial_sub_ok != 1) {
      conf_index = 0;
  }

  /* Search for the corresponding system size inside the tuning table */
  while ((range < (mv2_size_scatter_tuning_table[conf_index] - 1)) &&
      (comm_size > mv2_scatter_thresholds_table[conf_index][range].numproc)) {
      range++;
  }
  /* Search for corresponding inter-leader function */
  while ((range_threshold < (mv2_scatter_thresholds_table[conf_index][range].size_inter_table - 1))
      && (nbytes >
  mv2_scatter_thresholds_table[conf_index][range].inter_leader[range_threshold].max)
  && (mv2_scatter_thresholds_table[conf_index][range].inter_leader[range_threshold].max != -1)) {
      range_threshold++;
  }

  /* Search for corresponding intra-node function */
  while ((range_threshold_intra <
      (mv2_scatter_thresholds_table[conf_index][range].size_intra_table - 1))
      && (nbytes >
  mv2_scatter_thresholds_table[conf_index][range].intra_node[range_threshold_intra].max)
  && (mv2_scatter_thresholds_table[conf_index][range].intra_node[range_threshold_intra].max !=
      -1)) {
      range_threshold_intra++;
  }

  MV2_Scatter_function = mv2_scatter_thresholds_table[conf_index][range].inter_leader[range_threshold]
                                                                                      .MV2_pt_Scatter_function;

  if(MV2_Scatter_function == &MPIR_Scatter_mcst_wrap_MV2) {
#if defined(_MCST_SUPPORT_)
      if(comm->ch.is_mcast_ok == 1
          && mv2_use_mcast_scatter == 1
          && comm->ch.shmem_coll_ok == 1) {
          MV2_Scatter_function = &MPIR_Scatter_mcst_MV2;
      } else
#endif /*#if defined(_MCST_SUPPORT_) */
        {
          if(mv2_scatter_thresholds_table[conf_index][range].inter_leader[range_threshold + 1].
              MV2_pt_Scatter_function != NULL) {
              MV2_Scatter_function = mv2_scatter_thresholds_table[conf_index][range].inter_leader[range_threshold + 1]
                                                                                                  .MV2_pt_Scatter_function;
          } else {
              /* Fallback! */
              MV2_Scatter_function = &MPIR_Scatter_MV2_Binomial;
          }
        }
  }

  if( (MV2_Scatter_function == &MPIR_Scatter_MV2_two_level_Direct) ||
      (MV2_Scatter_function == &MPIR_Scatter_MV2_two_level_Binomial)) {
       if( comm->is_blocked()) {
             MV2_Scatter_intra_function = mv2_scatter_thresholds_table[conf_index][range].intra_node[range_threshold_intra]
                                .MV2_pt_Scatter_function;

             mpi_errno =
                   MV2_Scatter_function(sendbuf, sendcnt, sendtype,
                                        recvbuf, recvcnt, recvtype, root,
                                        comm);
         } else {
      mpi_errno = MPIR_Scatter_MV2_Binomial(sendbuf, sendcnt, sendtype,
          recvbuf, recvcnt, recvtype, root,
          comm);

      }
  } else {
      mpi_errno = MV2_Scatter_function(sendbuf, sendcnt, sendtype,
          recvbuf, recvcnt, recvtype, root,
          comm);
  }
  return (mpi_errno);
}