Exemplo n.º 1
0
void SamFile::init(const char* filename, OpenType mode, SamFileHeader* header)
{
    init();
        
    resetFile();

    bool openStatus = true;
    if(mode == READ)
    {
        // open the file for read.
        openStatus = OpenForRead(filename, header);
    }
    else
    {
        // open the file for write.
        openStatus = OpenForWrite(filename, header);
    }
    if(!openStatus)
    {
        // Failed to open the file - print error and abort.
        fprintf(stderr, "%s\n", GetStatusMessage());
        std::cerr << "FAILURE - EXITING!!!" << std::endl;
        exit(-1);
    }
}
Exemplo n.º 2
0
  bool Create(const std::string &suffix)
  {
    std::error_code ec;
    m_ptempFilePath = fs::temp_file_path(suffix, ec);
    if (ec)
      return false;

    if (m_ptempFilePath.empty())
      return false;

    OpenForWrite(m_ptempFilePath.c_str(), true);
    return true;
  }
Exemplo n.º 3
0
    //*************************************************************************
    //
    // TheBard is a sample application that configures a BitFunnel index based
    // on a small corpus of 154 Shakespeare sonnets. This standalone example
    // performs an end-to-end configuration, including corpus statistics
    // analysis and TermTable construction.
    //
    // The sonnets are incorporated into the codebase as cstrings, allowing the
    // example to run without touching the filesystem.
    //
    //*************************************************************************
    void Run(bool verbose)
    {
        //
        // This example uses the RAM filesystem.
        //
        auto fileSystem = BitFunnel::Factories::CreateRAMFileSystem();
        auto fileManager =
            BitFunnel::Factories::CreateFileManager(
                "config",
                "statistics",
                "index",
                *fileSystem);

        //
        // Initialize RAM filesystem with input files.
        //
        {
            std::cout << "Initializing RAM filesystem." << std::endl;

            // Open the manifest file.
            auto manifest = fileSystem->OpenForWrite("manifest.txt");

            // Iterate over sequence of Shakespeare sonnet chunk data.
            for (size_t i = 0; i < Sonnets::chunks.size(); ++i)
            {
                // Create chunk file name, and write chunk data.
                std::stringstream name;
                name << "sonnet" << i;
                auto out = fileSystem->OpenForWrite(name.str().c_str());
                // TODO: consider checking for cast overflow?
                out->write(Sonnets::chunks[i].second,
                           static_cast<std::streamsize>(Sonnets::chunks[i].first));

                // Add chunk file to manifest.
                *manifest << name.str() << std::endl;
            }
        }

        //
        // Create the BitFunnelTool based on the RAM filesystem.
        //
        BitFunnel::BitFunnelTool tool(*fileSystem);

        //
        // Use the tool to run the statistics builder.
        //
        {
            std::cout << "Gathering corpus statistics." << std::endl;

            std::vector<char const *> argv = {
                "BitFunnel",
                "statistics",
                "manifest.txt",
                "config",
                "-text"
            };

            std::stringstream ignore;
            std::ostream& out = (verbose) ? std::cout : ignore;

            tool.Main(std::cin,
                      out,
                      static_cast<int>(argv.size()),
                      argv.data());
        }


        //
        // Use the tool to run the TermTable builder.
        //
        {
            std::cout << "Building the TermTable." << std::endl;

            std::vector<char const *> argv = {
                "BitFunnel",
                "termtable",
                "config",
                "0.1",
                "PrivateSharedRank0ToN"
            };

            std::stringstream ignore;
            std::ostream& out = (verbose) ? std::cout : ignore;

            auto result = tool.Main(std::cin,
                                    out,
                                    static_cast<int>(argv.size()),
                                    argv.data());

            CHECK_EQ(result, 0) << "TermTableBuilder failed.";

            std::cout
                << "Index is now configured."
                << std::endl
                << std::endl;
        }


        //
        // Use the tool to run the REPL.
        //
        {
            std::vector<char const *> argv = {
                "BitFunnel",
                "repl",
                "config"
            };

            tool.Main(std::cin,
                      std::cout,
                      static_cast<int>(argv.size()),
                      argv.data());
        }
    }