DEFINE_PLUGIN_PROTOTYPE
PLUGIN_interface * PLUGIN_init( int ncall )
{
int ii ;
PLUGIN_interface * plint ; /* will be the output of this routine */
if( ncall > 0 ) return NULL ;
CHECK_IF_ALLOWED("L1FIT","L1_Fit & Dtr") ; /* 30 Sep 2016 */
/*---------------- set titles and call point ----------------*/
plint = PLUTO_new_interface( "L1_Fit & Dtr" ,
"Control L1_Fit and L1_Dtr Functions" ,
helpstring ,
PLUGIN_CALL_VIA_MENU , L1F_main ) ;
global_plint = plint ; /* make global copy */
PLUTO_set_sequence( plint , "A:funcs:fitting" ) ;
PLUTO_add_hint( plint , "Control L1_Fit and L1_Dtr Functions" ) ;
PLUTO_set_runlabels( plint , "Set+Keep" , "Set+Close" ) ; /* 04 Nov 2003 */
/*----- Parameters -----*/
PLUTO_add_option( plint , "Parameters" , "Parameters" , TRUE ) ;
PLUTO_add_string( plint , "Baseline" , NBASE , baseline_strings , 1 ) ;
PLUTO_add_number( plint , "Ignore" , 0,20,0,3 , FALSE ) ;
/*----- Sinusoid -----*/
for( ii=0 ; ii < NRMAX_SIN ; ii++ ){
PLUTO_add_option( plint , "Sinusoid" , "Sinusoid" , FALSE ) ;
PLUTO_add_number( plint , "Period" , 0,99999,0,20, TRUE ) ;
PLUTO_add_number( plint , "Harmonics" , 1,HARM_MAX,0,1 , FALSE ) ;
}
/*----- Timeseries -----*/
for( ii=0 ; ii < NRMAX_TS ; ii++ ){
PLUTO_add_option( plint , "Timeseries" , "Timeseries" , FALSE ) ;
PLUTO_add_timeseries( plint , "File" ) ;
}
/*--------- done with interface setup ---------*/
PLUTO_register_1D_funcstr( "L1_Fit" , L1F_fitter ) ;
PLUTO_register_1D_funcstr( "L1_Dtr" , L1F_detrend ) ;
return plint ;
}
DEFINE_PLUGIN_PROTOTYPE
PLUGIN_interface * PLUGIN_init( int ncall )
{
PLUGIN_interface * plint ; /* will be the output of this routine */
if( ncall > 0 ) return NULL ; /* one interfaces */
/*---------------- set titles and call point ----------------*/
plint = PLUTO_new_interface( "SingleTrial Avg" ,
"Averaging of epochs in Single Trial data" ,
helpstring ,
PLUGIN_CALL_VIA_MENU , STAVG_main ) ;
PLUTO_add_hint( plint , "Averaging of epochs in Single Trial data" ) ;
global_plint = plint ; /* make global copy */
PLUTO_set_sequence( plint , "z:Birn" ) ;
/*--------- 1st line ---------*/
PLUTO_add_option( plint ,
"Datasets" , /* label at left of input line */
"Datasets" , /* tag to return to plugin */
TRUE /* is this mandatory? */
) ;
PLUTO_add_dataset( plint ,
"Input" , /* label next to button */
ANAT_ALL_MASK , /* take any anat datasets */
FUNC_FIM_MASK , /* only allow fim funcs */
DIMEN_4D_MASK | /* need 3D+time datasets */
BRICK_ALLREAL_MASK /* need real-valued datasets */
) ;
PLUTO_add_hint( plint , "Input 3d+t dataset" ) ;
PLUTO_add_string( plint ,
"Output" , /* label next to textfield */
0,NULL , /* no fixed strings to choose among */
19 /* 19 spaces for typing in value */
) ;
PLUTO_add_hint( plint , "Name of output dataset" ) ;
/*---------- 2nd line --------*/
PLUTO_add_option( plint ,
"Timing" ,
"Timing" ,
TRUE
) ;
PLUTO_add_timeseries(plint, "Stim. Timing");
PLUTO_add_hint( plint , "Stimulus Timing (0 = no task, 1 = task)" ) ;
PLUTO_add_number( plint ,
"delta" ,
-1000 ,
1000 ,
0 ,
0 ,
TRUE
) ;
PLUTO_add_hint( plint , "Shift data timecourse by delta before splitting and averaging" ) ;
/*---------- 3rd line: computation ----------*/
PLUTO_add_option( plint ,
"Compute" , /* label at left of input line */
"Compute" , /* tag to return to plugin */
TRUE /* is this mandatory? */
) ;
PLUTO_add_string( plint ,
"Method" , /* label next to chooser button */
_STAVG_NUM_METHODS, /* number of strings in list */
method_strings , /* list of strings to choose among */
_STAVG_METH_MEAN /* index of default string */
) ;
PLUTO_add_hint( plint , "Choose statistic to compute" ) ;
/*---------- 4th line --------*/
PLUTO_add_option( plint ,
"Parameters" , /* label at left of input line */
"Parameters" , /* tag to return to plugin */
FALSE /* is this mandatory? */
) ;
PLUTO_add_number( plint ,
"maxlength" , /* label next to chooser */
0 , /* smallest possible value */
1000 , /* largest possible value */
0 , /* decimal shift (none in this case) */
15 , /* default value */
TRUE /* allow user to edit value? */
) ;
PLUTO_add_hint( plint , "maximum # of timepoints of output dataset" ) ;
PLUTO_add_string( plint ,
"no1?" , /* label next to chooser button */
2 , /* number of strings to choose among */
yes_no_strings , /* list of strings to choose among */
1 /* index of default string */
) ;
PLUTO_add_hint( plint , "ignore timepoints where only one image is in average" ) ;
/*--------- done with interface setup ---------*/
return plint ;
}
DEFINE_PLUGIN_PROTOTYPE
PLUGIN_interface * PLUGIN_init( int ncall )
{
PLUGIN_interface * plint ; /* will be the output of this routine */
if( ncall > 0 ) return NULL ; /* only one interface */
/*---------------- set titles and call point ----------------*/
plint = PLUTO_new_interface( "Hilbert Delay98" ,
"Time delay between FMRI and reference time series" ,
helpstring ,
PLUGIN_CALL_VIA_MENU , DELAY_main ) ;
global_plint = plint ; /* make global copy */
/*--------- 1st line: Input dataset ---------*/
PLUTO_add_option( plint ,
"Data" , /* label at left of input line */
"Data" , /* tag to return to plugin */
TRUE /* is this mandatory? */
) ;
PLUTO_add_dataset( plint ,
"3D+time" , /* label next to button */
ANAT_ALL_MASK , /* take only EPI datasets */
FUNC_ALL_MASK , /* No fim funcs */
DIMEN_4D_MASK | /* need 3D+time datasets */
BRICK_ALLREAL_MASK /* need real-valued datasets */
) ;
PLUTO_add_number( plint ,
"Nort" , /* label next to chooser */
1 , /* smallest possible value */
100 , /* largest possible value (inactivated for now)*/
0 , /* decimal shift (none in this case) */
2 , /* default value */
FALSE /* allow user to edit value? */
) ;
/*---------- 2nd line: Input time series ----------*/
PLUTO_add_option( plint ,
"Ref." , /* label at left of input line */
"Ref." , /* tag to return to plugin */
TRUE /* is this mandatory? */
) ;
PLUTO_add_timeseries(plint,"Ref. Vect.");
PLUTO_add_number( plint ,
"Ignore" , /* label next to chooser */
0 , /* smallest possible value */
50 , /* largest possible value (inactivated for now)*/
0 , /* decimal shift (none in this case) */
0 , /* default value */
FALSE /* allow user to edit value? */
) ;
PLUTO_add_string( plint ,
"Dsamp" , /*label next to textfield */
2,yn_strings, /* strings to choose among */
1 /* Default option */
) ;
/*---------- 3rd line: sampling frequency ----------*/
PLUTO_add_option( plint ,
"Sig." , /* label at left of input line */
"Sig." , /* tag to return to plugin */
TRUE /* is this mandatory? */
) ;
PLUTO_add_number( plint ,
"fs in Hz" , /* label next to chooser */
0 , /* smallest possible value */
2000 , /* largest possible value */
1 , /* decimal shift (none in this case) */
5 , /* default value */
TRUE /* allow user to edit value? */
) ;
PLUTO_add_number( plint ,
"Tstim sec" , /* label next to chooser */
0.0 , /* smallest possible value */
500 , /* largest possible value */
0 , /* decimal shift (none in this case) */
40 , /* default value */
TRUE /* allow user to edit value? */
) ;
PLUTO_add_number( plint ,
"C-Off" , /* label next to chooser */
-10 , /* smallest possible value */
10 , /* largest possible value */
1 , /* decimal shift */
5 , /* default value */
TRUE /* allow user to edit value? */
) ;
PLUTO_add_string( plint ,
"No-bias" , /*label next to textfield */
2,yn_strings, /* strings to choose among */
1 /* Default option */
) ;
/*---------- 4th line: Delay Units ----------*/
PLUTO_add_option( plint ,
"Alg." , /* label at left of input line */
"Alg." , /* tag to return to plugin */
TRUE /* is this mandatory? */
) ;
PLUTO_add_number( plint ,
"N seg." , /* label next to chooser */
1 , /* smallest possible value */
1 , /* largest possible value (turned Off for the moment, supporting code is present)*/
0 , /* decimal shift (none in this case) */
1 , /* default value */
FALSE /* allow user to edit value? */
) ;
PLUTO_add_number( plint ,
"% ovrlp" , /* label next to chooser */
0 , /* smallest possible value */
0 , /* largest possible value (not implemented)*/
0 , /* decimal shift (none in this case) */
0 , /* default value */
FALSE /* allow user to edit value? */
) ;
PLUTO_add_string( plint ,
"Units" , /* label next to textfield */
3,method_strings, /* strings to choose among */
0 /* Default option */
) ;
PLUTO_add_string( plint ,
"Phz Wrp" , /* label next to textfield */
2,yn_strings, /* strings to choose among */
0 /* Default option */
) ;
/*---------- 5th line: Output dataset ----------*/
PLUTO_add_option( plint ,
"Output" , /* label at left of input line */
"Output" , /* tag to return to plugin */
TRUE /* is this mandatory? */
) ;
PLUTO_add_string( plint ,
"AFNI Prfx" , /* label next to textfield */
0,NULL , /* no fixed strings to choose among */
19 /* 19 spaces for typing in value */
) ;
PLUTO_add_string( plint ,
"Write" , /* label next to textfield */
2,yn_strings ,
1
) ;
PLUTO_add_string( plint , "Filename" , 0 , NULL , 19 ) ;
PLUTO_add_string( plint ,
"Write ts" , /* label next to textfield */
2,yn_strings ,
1
) ;
/*--------- done with interface setup ---------*/
return plint ;
}
