ImportPrimerFromObjectTask::ImportPrimerFromObjectTask(GObject *object) :
Task(tr("Import primer from the shared database object: %1").arg(NULL == object ? "N/A" : object->getGObjectName()),
TaskFlags(TaskFlag_ReportingIsEnabled | TaskFlag_ReportingIsSupported)), validator(this)
{
SAFE_POINT_EXT(NULL != object, setError(L10N::nullPointerError("an input object")), );
SAFE_POINT_EXT(GObjectTypes::SEQUENCE == object->getGObjectType(), setError(tr("A non-sequence object was provided")), );
sequenceObject = qobject_cast<U2SequenceObject *>(object);
SAFE_POINT_EXT(NULL != sequenceObject, setError(L10N::nullPointerError("sequence object")), );
SAFE_POINT_EXT(sequenceObject->getAlphabet(), setError(L10N::nullPointerError("sequence alphabet")), );
CHECK_EXT(sequenceObject->getAlphabet()->isDNA(), setError(tr("The sequence has an unsupported alphabet: only nucleotide alphabet is supported")), );
CHECK_EXT(sequenceObject->getSequenceLength() < Primer::MAX_LEN, setError(tr("Can't convert a sequence to primer: the sequence is too long")), );
}
SamtoolsMpileupTask::SamtoolsMpileupTask(const CallVariantsTaskSettings &_settings)
:ExternalToolSupportTask(tr("Samtool mpileup for %1 ").arg(_settings.refSeqUrl), TaskFlags(TaskFlag_None)),settings(_settings)
{
}
