Exemplo n.º 1
0
/*!
* \return	Woolz error code.
* \ingroup	WlzValuesUtils
* \brief 	Transfers grey values from the 2D source object to the
*               2D destination object where both share the same domain.
*               The objects are assumed valid 2D domain objects from
*               WlzGreyTransfer().
* \param	dObj			Destination object.
* \param	sObj			Source object.
*/
static WlzErrorNum		WlzGreyTransfer2D(
				  WlzObject *dObj,
				  WlzObject *sObj)
{
  WlzGreyWSpace sGWSp,
  		dGWSp;
  WlzIntervalWSpace sIWSp,
  		    dIWSp;
  WlzErrorNum	errNum = WLZ_ERR_NONE;

  if(errNum == WLZ_ERR_NONE)
  {
    errNum = WlzInitGreyScan(sObj, &sIWSp, &sGWSp);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    errNum = WlzInitGreyScan(dObj, &dIWSp, &dGWSp);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    int		bub;

    bub = (sGWSp.pixeltype == dGWSp.pixeltype) &&
          (sGWSp.pixeltype == WLZ_GREY_UBYTE);
    while((errNum == WLZ_ERR_NONE) &&
	  ((errNum = WlzNextGreyInterval(&sIWSp)) == WLZ_ERR_NONE) &&
	  ((errNum = WlzNextGreyInterval(&dIWSp)) == WLZ_ERR_NONE))
    {
      if(bub)
      {
	/* Avoid switches and function calls for the most common case. */
	(void )memcpy(dGWSp.u_grintptr.ubp, sGWSp.u_grintptr.ubp,
		      sIWSp.colrmn * sizeof(WlzUByte));
      }
      else
      {
	WlzValueCopyGreyToGrey(dGWSp.u_grintptr, 0, dGWSp.pixeltype,
			       sGWSp.u_grintptr, 0, sGWSp.pixeltype,
			       sIWSp.colrmn);
      }
    }
  }
  if(errNum == WLZ_ERR_EOO)
  {
    (void )WlzEndGreyScan(&sIWSp, &sGWSp);
    (void )WlzEndGreyScan(&dIWSp, &dGWSp);
    errNum = WLZ_ERR_NONE;
  }
  return(errNum);
}
Exemplo n.º 2
0
/*!
* \return	New filtered object with new values or NULL on error.
* \ingroup	WlzValuesFilters
* \brief	Applies a seperable filter along the x axis (columns)
* 		to the given object using the given convolution kernel.
* \param	inObj			Input 2 or 3D spatial domain object
* 					to be filtered which must have scalar
* 					values.
* \param	dim			Object's dimension.
* \param	maxThr			Maximum number of threads to use.
* \param	iBuf			Working buffers large enough for any
* 				        line in the image with one for each
* 				        thread.
* \param	rBuf			Buffers as for iBuf. 			
* \param	cBufSz			Convolution kernel size.
* \param	cBuf			Convolution kernel buffer.
* \param	pad			Type of padding.
* \param	padVal			Padding value.
* \param	dstErr			Destination error pointer may be NULL.
*/
static WlzObject		*WlzSepFilterX(WlzObject *inObj,
				  int dim,
				  int maxThr,
				  double **iBuf,
				  double **rBuf,
				  int cBufSz,
				  double *cBuf,
				  AlgPadType pad,
				  double padVal,
				  WlzErrorNum *dstErr)
{
  int		idp,
		poff,
  		nPln;
  WlzObjectType	rGTT;
  WlzDomain	*domains;
  WlzValues	*iVal,
  		*rVal;
  WlzPixelV	zV;
  WlzObject	*rnObj = NULL;
  WlzErrorNum	errNum = WLZ_ERR_NONE;
  		
  zV.v.dbv = 0.0;
  zV.type = WLZ_GREY_DOUBLE;
  rGTT = WlzGreyTableType(WLZ_GREY_TAB_RAGR, WLZ_GREY_DOUBLE, NULL);
  if(dim == 3)
  {
    WlzPlaneDomain *pDom;
    WlzVoxelValues *vVal;

    pDom = inObj->domain.p;
    vVal = inObj->values.vox;
    nPln = pDom->lastpl - pDom->plane1 + 1;
    domains = pDom->domains;
    iVal = vVal->values;
    poff = pDom->plane1 - vVal->plane1;
    rnObj = WlzNewObjectValues(inObj, rGTT, zV, 1, zV, &errNum);
    if(errNum == WLZ_ERR_NONE)
    {
      rVal = rnObj->values.vox->values;
    }
  }
  else
  {
    nPln = 1;
    poff = 0;
    domains = &(inObj->domain);
    iVal = &(inObj->values);
    rnObj = WlzNewObjectValues(inObj, rGTT, zV, 1, zV, &errNum);
    if(errNum == WLZ_ERR_NONE)
    {
      rVal = &(rnObj->values);
    }
  }
  if(errNum == WLZ_ERR_NONE)
  {
#ifdef _OPENMP
#pragma omp parallel for num_threads(maxThr)
#endif
    for(idp = 0; idp < nPln; ++idp)
    {
      if(errNum == WLZ_ERR_NONE)
      {
	if(domains[idp].core != NULL)
	{
	  int		thrId = 0;
	  WlzObject 	*iObj = NULL,
			*rObj = NULL;
	  WlzIntervalWSpace iIWSp,
			    rIWSp;
	  WlzGreyWSpace	iGWSp,
			rGWSp;
          WlzErrorNum	errNum2 = WLZ_ERR_NONE;

#ifdef _OPENMP
          thrId = omp_get_thread_num();
#endif
	  iObj = WlzMakeMain(WLZ_2D_DOMAINOBJ, domains[idp], iVal[idp + poff],
			     NULL, NULL, &errNum2);
	  if(errNum2 == WLZ_ERR_NONE)
	  {
	    rObj = WlzMakeMain(WLZ_2D_DOMAINOBJ, domains[idp], rVal[idp],
			       NULL, NULL, &errNum2);
	  }
	  if((errNum2 == WLZ_ERR_NONE) &&
	     ((errNum2 = WlzInitGreyScan(iObj, &iIWSp,
	                                 &iGWSp)) == WLZ_ERR_NONE) &&
	     ((errNum2 = WlzInitGreyScan(rObj, &rIWSp,
	                                 &rGWSp)) == WLZ_ERR_NONE))
	  {
	    while(((errNum2 = WlzNextGreyInterval(&iIWSp)) == WLZ_ERR_NONE) &&
		  ((errNum2 = WlzNextGreyInterval(&rIWSp)) == WLZ_ERR_NONE))
	    {
	      size_t	len;
	      WlzGreyP	iBufGP;

	      
	      iBufGP.dbp = iBuf[thrId];
	      len = iIWSp.rgtpos - iIWSp.lftpos + 1;
	      WlzValueCopyGreyToGrey(iBufGP, 0, WLZ_GREY_DOUBLE,
				     iGWSp.u_grintptr, 0, iGWSp.pixeltype,
				     len);
	      AlgConvolveD(len, rBuf[thrId], cBufSz * 2 + 1, cBuf,
                           len, iBuf[thrId], pad, padVal);
	      WlzValueCopyDoubleToDouble(rGWSp.u_grintptr.dbp,
				         rBuf[thrId], len);
	    }
	    (void )WlzEndGreyScan(&iIWSp, &iGWSp);
	    (void )WlzEndGreyScan(&rIWSp, &rGWSp);
	    if(errNum2 == WLZ_ERR_EOO)
	    {
	      errNum2 = WLZ_ERR_NONE;
	    }
	  }
	  (void )WlzFreeObj(iObj);
	  (void )WlzFreeObj(rObj);
	  if(errNum2 != WLZ_ERR_NONE)
	  {
#ifdef _OPENMP
#pragma omp critical
	    {
#endif
	      if(errNum == WLZ_ERR_NONE)
	      {
		errNum = errNum2;
	      }
#ifdef _OPENMP
	    }
#endif
	  }
	}
      }
    }
  }
  if(errNum != WLZ_ERR_NONE)
  {
    (void )WlzFreeObj(rnObj);
    rnObj = NULL;
  }
  if(dstErr)
  {
    *dstErr = errNum;
  }
  return(rnObj);
}
Exemplo n.º 3
0
/*!
* \return	New Woolz domain object with maximal domain and grey
*		values which encode the gradient's direction or NULL
*		on error.
* \ingroup	WlzFeatures
* \brief	Computes the maximal domain and gradient direction of
*               given Woolz 2D domain object.
* \note         All the objects domains are known to be the same.
* \param	grdM			Gradient magnitude.
* \param	grdY			Gradient (partial derivative)
*                                       through lines.
* \param	grdX			Gradient (partial derivative)
*                                       through columns.
* \param	minThrV			Minimum gradient value to
*                                       consider.
* \param	dstErr			Destination error pointer, may
*                                       be null.
*/
static WlzObject *WlzNMSuppress2D(WlzObject *grdM,
				  WlzObject *grdY, WlzObject *grdX,
				  WlzPixelV minThrV, WlzErrorNum *dstErr)
{
  int		idN,
		inLen,
		outLen,
  		inLnIdx = 0;
  WlzGreyType	gType,
  		bufType;
  WlzIVertex2	bufSz,
  		inPos,
		outPos,
		orgPos;
  WlzValues	tmpVal;
  WlzDomain	dstDom,
  		grdDom;
  WlzIntervalWSpace tmpIWSp = {0},
  		grdMIWSp = {0},
  		grdYIWSp = {0},
		grdXIWSp = {0};
  WlzGreyWSpace tmpGWSp,
  		grdMGWSp,
  		grdYGWSp,
		grdXGWSp;
  WlzPixelV	zeroV;
  WlzGreyP	grdMBufGP,
  		grdYBufGP,
		grdXBufGP;
  WlzDynItvPool pool;
  WlzObject	*dstObj = NULL,
  		*tmpObj = NULL;
  void 		*grdYBuf = NULL,
		*grdXBuf = NULL;
  void		**grdMBuf = NULL;
  WlzErrorNum	errNum = WLZ_ERR_NONE;

  tmpVal.core = NULL;
  pool.itvBlock = NULL;
  dstDom.core = NULL;
  if((grdM->type != WLZ_2D_DOMAINOBJ) ||
     (grdY->type != WLZ_2D_DOMAINOBJ) ||
     (grdX->type != WLZ_2D_DOMAINOBJ))
  {
    errNum = WLZ_ERR_OBJECT_NULL;
  }
  else if((grdM->domain.core == NULL) ||
          (grdY->domain.core == NULL) ||
          (grdX->domain.core == NULL))
  {
    errNum = WLZ_ERR_DOMAIN_NULL;
  }
  else if((grdM->values.core == NULL) ||
  	  (grdY->values.core == NULL) ||
	  (grdX->values.core == NULL))
  {
    errNum = WLZ_ERR_VALUES_NULL;
  }
  else
  {
    /* Find required buffer type (WLZ_GREY_DOUBLE or WLZ_GREY_INT). */
    bufType = WLZ_GREY_INT;
    gType = WlzGreyTableTypeToGreyType(grdM->values.core->type, &errNum);
    if(errNum == WLZ_ERR_NONE)
    {
      if((gType == WLZ_GREY_FLOAT) || (gType == WLZ_GREY_DOUBLE))
      {
	bufType = WLZ_GREY_DOUBLE;
      }
      else
      {
	gType = WlzGreyTableTypeToGreyType(grdY->values.core->type, &errNum);
	if(errNum == WLZ_ERR_NONE)
	{
	  if((gType == WLZ_GREY_FLOAT) || (gType == WLZ_GREY_DOUBLE))
	  {
	    bufType = WLZ_GREY_DOUBLE;
	  }
	  else
	  {
	    gType = WlzGreyTableTypeToGreyType(grdX->values.core->type,
	    				       &errNum);
	    if(errNum == WLZ_ERR_NONE)
	    {
	      if((gType == WLZ_GREY_FLOAT) || (gType == WLZ_GREY_DOUBLE))
	      {
		bufType = WLZ_GREY_DOUBLE;
	      }
	    }
	  }
	}
      }
    }
  }
  /* Convert minimum gradient threshold value. */
  if(errNum == WLZ_ERR_NONE)
  {
    if(bufType == WLZ_GREY_INT)
    {
      errNum = WlzValueConvertPixel(&minThrV, minThrV, WLZ_GREY_INT);
    }
    else /* bufType == WLZ_GREY_DOUBLE */
    {
      errNum = WlzValueConvertPixel(&minThrV, minThrV, WLZ_GREY_DOUBLE);
    }
  }
  if(errNum == WLZ_ERR_NONE)
  {
    grdDom = grdM->domain;
    /* Make destination object with WLZ_GREY_UBYTE greys. */
    zeroV.type = WLZ_GREY_UBYTE;
    zeroV.v.inv = 0;
    tmpVal.v = WlzNewValueTb(grdM, WlzGreyTableType(WLZ_GREY_TAB_RAGR,
						    WLZ_GREY_UBYTE, NULL),
			     zeroV, &errNum);
    if(errNum == WLZ_ERR_NONE)
    {
      /* Use the input domain while calculating the new maximal domain. */
      tmpObj = WlzMakeMain(WLZ_2D_DOMAINOBJ, grdM->domain, tmpVal,
			   NULL, NULL, &errNum);
    }
  }
  /* Initialize the memory pool with some size of block. Any +ve number
   * greater than the maximum number of intervals in any destination line
   * would work but the fewer allocations then the more efficient the code,
   * hence this attempt to guess the required number of intervals in the
   * destination domain. */
  if(errNum == WLZ_ERR_NONE)
  {
    pool.itvsInBlock = (((grdDom.i->lastkl - grdDom.i->kol1 + 1) *
			(grdDom.i->lastln - grdDom.i->line1 + 1)) / 64) +
		       grdDom.i->lastkl - grdDom.i->kol1 + 1024;
  }
  /* Make gradient buffers. */
  if(errNum == WLZ_ERR_NONE)
  {
    bufSz.vtY = 3;
    bufSz.vtX = grdDom.i->lastkl - grdDom.i->kol1 + 1;
    if(bufType == WLZ_GREY_INT)
    {
      if((AlcInt2Malloc((int ***)&grdMBuf,
			bufSz.vtY, bufSz.vtX) != ALC_ER_NONE) ||
	 ((grdYBuf = AlcMalloc(sizeof(int) * bufSz.vtX)) == NULL) ||
	 ((grdXBuf = AlcMalloc(sizeof(int) * bufSz.vtX)) == NULL))
      {
	errNum = WLZ_ERR_MEM_ALLOC;
      }
      else
      {
	grdYBufGP.inp = (int *)grdYBuf;
	grdXBufGP.inp = (int *)grdXBuf;
      }
    }
    else /* bufType == WLZ_GREY_DOUBLE */
    {
      if((AlcDouble2Malloc((double ***)&grdMBuf,
			   bufSz.vtY, bufSz.vtX) != ALC_ER_NONE) ||
	 ((grdYBuf = AlcMalloc(sizeof(double) * bufSz.vtX)) == NULL) ||
	 ((grdXBuf = AlcMalloc(sizeof(double) * bufSz.vtX)) == NULL))
      {
	errNum = WLZ_ERR_MEM_ALLOC;
      }
      else
      {
	grdYBufGP.dbp = (double *)grdYBuf;
	grdXBufGP.dbp = (double *)grdXBuf;
      }
    }
  }
  /* Make destination interval domain with interval lines but not intervals. */
  if(errNum == WLZ_ERR_NONE)
  {
    dstDom.i = WlzMakeIntervalDomain(WLZ_INTERVALDOMAIN_INTVL,
    				     grdDom.i->line1, grdDom.i->lastln,
				     grdDom.i->kol1, grdDom.i->lastkl,
				     &errNum);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    /* Scan down through the gradient objects. */
    if(((errNum = WlzInitGreyScan(tmpObj,
    				  &tmpIWSp, &tmpGWSp)) == WLZ_ERR_NONE) &&
       ((errNum = WlzInitGreyScan(grdM,
    				  &grdMIWSp, &grdMGWSp)) == WLZ_ERR_NONE) &&
       ((errNum = WlzInitGreyScan(grdY,
    				  &grdYIWSp, &grdYGWSp)) == WLZ_ERR_NONE) &&
       ((errNum = WlzInitGreyScan(grdX,
    				  &grdXIWSp, &grdXGWSp)) == WLZ_ERR_NONE))
    {
      orgPos.vtX = grdDom.i->kol1;
      orgPos.vtY = grdDom.i->line1;
      while((errNum == WLZ_ERR_NONE) &&
            ((errNum = WlzNextGreyInterval(&grdMIWSp)) == WLZ_ERR_NONE))
      {
        inLen = grdMIWSp.rgtpos - grdMIWSp.lftpos + 1;
	inPos.vtX = grdMIWSp.lftpos - orgPos.vtX;
	/* Process any lines between this and the last by clearing the
	 * gradient magnitude buffer . */
	if(grdMIWSp.nwlpos > 0)
	{
	  idN = (grdMIWSp.nwlpos >= 3)? 3: grdMIWSp.nwlpos;
	  while(--idN >= 0)
	  {
	    inPos.vtY = grdMIWSp.linpos - orgPos.vtY - idN;
	    inLnIdx = (3 + inPos.vtY) % 3;
	    if(bufType == WLZ_GREY_INT)
	    {
	      WlzValueSetInt(*((int **)grdMBuf + inLnIdx), 0,
	      		     bufSz.vtX);
	    }
	    else /* bufType == WLZ_GREY_DOUBLE */
	    {
	      WlzValueSetDouble(*((double **)grdMBuf + inLnIdx), 0,
	      			bufSz.vtX);
	    }
	  }
	}
	/* Copy intervals to values buffers. */
	if(bufType == WLZ_GREY_INT)
	{
	  grdMBufGP.inp = *((int **)grdMBuf + inLnIdx);
	}
	else /* bufType == WLZ_GREY_DOUBLE */
	{
	  grdMBufGP.dbp = *((double **)grdMBuf + inLnIdx);
	}
	WlzValueCopyGreyToGrey(grdMBufGP, inPos.vtX, bufType,
			       grdMGWSp.u_grintptr, 0, grdMGWSp.pixeltype,
			       inLen);
	if(grdMIWSp.intrmn == 0)
	{
	  while((errNum == WLZ_ERR_NONE) &&
	        (tmpIWSp.linpos < grdMIWSp.linpos))
	  {
	    outPos.vtY = tmpIWSp.linpos - orgPos.vtY;
	    if(outPos.vtY >= 0)
	    {
	      outLen = tmpIWSp.rgtpos - tmpIWSp.lftpos + 1;
	      outPos.vtX = tmpIWSp.lftpos - orgPos.vtX;
	      WlzValueCopyGreyToGrey(grdYBufGP, 0, bufType,
				     grdYGWSp.u_grintptr, 0,
				     grdYGWSp.pixeltype, outLen);
	      WlzValueCopyGreyToGrey(grdXBufGP, 0, bufType,
				     grdXGWSp.u_grintptr, 0,
				     grdXGWSp.pixeltype, outLen);
	      if(bufType == WLZ_GREY_INT)
	      {
		errNum = WlzNMSuppress2DBufI(dstDom.i,
					     (int **)grdMBuf,
					     (int *)grdYBuf,
					     (int *)grdXBuf,
					     &pool,
					     tmpGWSp.u_grintptr.ubp,
					     outLen, outPos, orgPos,
					     minThrV.v.inv);
	      }
	      else /* bufType == WLZ_GREY_DOUBLE */
	      {
		errNum = WlzNMSuppress2DBufD(dstDom.i,
				    	     (double **)grdMBuf,
				    	     (double *)grdYBuf,
					     (double *)grdXBuf,
					     &pool,
					     tmpGWSp.u_grintptr.ubp,
					     outLen, outPos, orgPos,
					     minThrV.v.dbv);
	      }
	    }
	    if(errNum == WLZ_ERR_NONE)
	    {
	      errNum = WlzNextGreyInterval(&tmpIWSp);
	    }
	    if(errNum == WLZ_ERR_NONE)
	    {
	      errNum = WlzNextGreyInterval(&grdYIWSp);
	    }
	    if(errNum == WLZ_ERR_NONE)
	    {
	      errNum = WlzNextGreyInterval(&grdXIWSp);
	    }
	  }
        }
      }
      if(errNum == WLZ_ERR_EOO)
      {
        errNum = WLZ_ERR_NONE;
      }
    }
    if(tmpIWSp.gryptr == &tmpGWSp)
    {
      (void )WlzEndGreyScan(&tmpIWSp, &tmpGWSp);
    }
    if(grdMIWSp.gryptr == &grdMGWSp)
    {
      (void )WlzEndGreyScan(&grdMIWSp, &grdMGWSp);
    }
    if(grdYIWSp.gryptr == &grdYGWSp)
    {
      (void )WlzEndGreyScan(&grdYIWSp, &grdYGWSp);
    }
    if(grdXIWSp.gryptr == &grdXGWSp)
    {
      (void )WlzEndGreyScan(&grdXIWSp, &grdXGWSp);
    }
  }
  if(errNum == WLZ_ERR_NONE)
  {
    if((errNum = WlzStandardIntervalDomain(dstDom.i)) == WLZ_ERR_NONE)
    {
      dstObj = WlzMakeMain(WLZ_2D_DOMAINOBJ, dstDom, tmpVal,
			   NULL, NULL, &errNum);
    }
  }
  if(tmpObj)
  {
    WlzFreeObj(tmpObj);
  }
  if(errNum != WLZ_ERR_NONE)
  {
    if(tmpObj == NULL)
    {
      if(dstDom.core)
      {
        (void )WlzFreeDomain(dstDom);
      }
      if(tmpVal.core)
      {
        (void )WlzFreeValues(tmpVal);
      }
    }
  }
  if(grdMBuf)
  {
    Alc2Free(grdMBuf);
  }
  if(grdYBuf)
  {
    AlcFree(grdYBuf);
  }
  if(grdXBuf)
  {
    AlcFree(grdXBuf);
  }
  if(dstErr)
  {
    *dstErr = errNum;
  }
  return(dstObj);
}
Exemplo n.º 4
0
/*!
* \return	New 2D domain object.
* \ingroup	WlzArithmetic
* \brief	Computes a new 2D object which shares the domain of the given
*		object, but which has grey values that are the result of
*		applying the given function to the grey values of the
*		given object.
* \param	sObj			Given source domain object with values.
* \param	fn			Scalar function to be applied.
* \param	dstErr			Destination error pointer, may be NULL.
*/
static WlzObject *WlzScalarFn2D(WlzObject *sObj, WlzFnType fn,
			        WlzErrorNum *dstErr)
{
  WlzGreyType	sGType,
  		dGType;
  WlzPixelV	sBgd,
  		dBgd;
  WlzObjectType	dVType;
  WlzObject     *dObj = NULL;
  WlzValues	dVal;
  WlzIntervalWSpace sIWSp,
  		dIWSp;
  WlzGreyWSpace	sGWSp,
  		dGWSp;
  WlzErrorNum   errNum = WLZ_ERR_NONE;

  sGType = WlzGreyTypeFromObj(sObj, &errNum);
  if(errNum == WLZ_ERR_NONE)
  {
    dGType = WlzScalarFnPromoteGType(fn, sGType, &errNum);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    dVType = WlzGreyTableType(WLZ_GREY_TAB_RAGR, dGType, &errNum);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    sBgd = WlzGetBackground(sObj, &errNum);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    dBgd = WlzScalarFnPixel(sBgd, fn, &errNum);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    dVal.v = WlzNewValueTb(sObj, dVType, dBgd, &errNum);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    dObj = WlzMakeMain(WLZ_2D_DOMAINOBJ,
    		       sObj->domain, dVal, NULL, NULL, &errNum);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    errNum = WlzInitGreyScan(sObj, &sIWSp, &sGWSp);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    errNum = WlzInitGreyScan(dObj, &dIWSp, &dGWSp);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    while((errNum == WLZ_ERR_NONE) &&
          ((errNum = WlzNextGreyInterval(&sIWSp)) == WLZ_ERR_NONE) &&
          ((errNum = WlzNextGreyInterval(&dIWSp)) == WLZ_ERR_NONE))
    {
      int	len;
      WlzGreyP	dGP,
      		sGP;

      len = sIWSp.rgtpos - sIWSp.lftpos + 1;
      dGP = dGWSp.u_grintptr;
      sGP = sGWSp.u_grintptr;
      WlzValueCopyGreyToGrey(dGP, 0, dGType, sGP, 0, sGType, len);
      WlzScalarFnItv(dGP, dGType, len, fn);
    }
    if(errNum == WLZ_ERR_EOO)
    {
      errNum = WLZ_ERR_NONE;
    }
  }
  if(dstErr)
  {
    *dstErr = errNum;
  }
  return(dObj);
}
Exemplo n.º 5
0
/*!
* \return	New Woolz domain object with gradient grey values or NULL on
*		error.
* \ingroup      WlzValuesFilters
* \brief	Computes the magnitude of the gray values in the
*               3 given Woolz 2D domain objects.
* \param	srcObj0			First object.
* \param	srcObj1			Second object.
* \param	srcObj2			Third object.
* \param	dstErr			Destination error pointer, may be null.
*/
static WlzObject *WlzGreyMagnitude2D3(WlzObject *srcObj0, WlzObject *srcObj1,
				      WlzObject *srcObj2,
				      WlzErrorNum *dstErr)
{
  int		idN,
		itvLen,
  		bufSz;
  double	**iBufA = NULL;
  WlzObject     *tObj0,
		*istObj = NULL,
                *dstObj = NULL;
  WlzObject	*iObjA[3],
  		*tObjA[3];
  WlzGreyP	tGP0;
  WlzGreyType	dstGType = WLZ_GREY_ERROR;
  WlzGreyType	gTypeA[3];
  WlzPixelV	dstBgd;
  WlzPixelV	bgdA[3];
  WlzValues	dstVal;
  WlzIntervalWSpace dstIWSp;
  WlzGreyWSpace	dstGWSp;
  WlzIntervalWSpace iIWSpA[3];
  WlzGreyWSpace	iGWSpA[3];
  WlzErrorNum   errNum = WLZ_ERR_NONE;

  *(iObjA + 0) = *(iObjA + 1) = *(iObjA + 2) = NULL;
  /* Check source objects. */
  if((srcObj0 == NULL) || (srcObj1 == NULL) ||(srcObj2 == NULL))
  {
    errNum = WLZ_ERR_OBJECT_NULL;;
  }
  else if((srcObj0->type != WLZ_2D_DOMAINOBJ) ||
          (srcObj1->type != WLZ_2D_DOMAINOBJ) ||
          (srcObj2->type != WLZ_2D_DOMAINOBJ))
  {
    errNum = WLZ_ERR_OBJECT_TYPE;
  }
  else if((srcObj0->domain.core == NULL) ||
          (srcObj1->domain.core == NULL) ||
          (srcObj2->domain.core == NULL))
  {
    errNum = WLZ_ERR_DOMAIN_NULL;
  }
  else if((srcObj0->values.core == NULL) ||
          (srcObj1->values.core == NULL) ||
          (srcObj2->values.core == NULL))
  {
    errNum = WLZ_ERR_VALUES_NULL;
  }
  /* Compute the intersection of the source objects. */
  if(errNum == WLZ_ERR_NONE)
  {
    *(tObjA + 0) = srcObj0;
    *(tObjA + 1) = srcObj1;
    *(tObjA + 2) = srcObj2;
    istObj = WlzIntersectN(3, tObjA, 0, &errNum);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    *(iObjA + 0) = WlzMakeMain(WLZ_2D_DOMAINOBJ,
    			       istObj->domain, srcObj0->values,
    			       NULL, NULL, &errNum);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    *(iObjA + 1) = WlzMakeMain(WLZ_2D_DOMAINOBJ,
    			       istObj->domain, srcObj1->values,
    			       NULL, NULL, &errNum);
  }
  if(errNum == WLZ_ERR_NONE)
  {
    *(iObjA + 2) = WlzMakeMain(WLZ_2D_DOMAINOBJ,
    			       istObj->domain, srcObj2->values,
    			       NULL, NULL, &errNum);
  }
  /* Get background value and grey types */
  idN = 0;
  while((errNum == WLZ_ERR_NONE) && (idN < 3))
  {
    tObj0 = *(iObjA + idN);
    *(gTypeA + idN) = WlzGreyTableTypeToGreyType(tObj0->values.core->type,
				                 &errNum);
    if(errNum == WLZ_ERR_NONE)
    {
      *(bgdA + idN) = WlzGetBackground(tObj0, &errNum);
    }
    ++idN;
  }
  /* Promote grey types. */
  if(errNum == WLZ_ERR_NONE)
  {
    if((*(gTypeA + 0) == WLZ_GREY_DOUBLE) ||
       (*(gTypeA + 1) == WLZ_GREY_DOUBLE) ||
       (*(gTypeA + 2) == WLZ_GREY_DOUBLE))
    {
      dstGType = WLZ_GREY_DOUBLE;
    }
    else if((*(gTypeA + 0) == WLZ_GREY_FLOAT) ||
	    (*(gTypeA + 1) == WLZ_GREY_FLOAT) ||
	    (*(gTypeA + 2) == WLZ_GREY_FLOAT))
    {
      dstGType = WLZ_GREY_FLOAT;
    }
    else if((*(gTypeA + 0) == WLZ_GREY_INT) ||
	    (*(gTypeA + 1) == WLZ_GREY_INT) ||
	    (*(gTypeA + 2) == WLZ_GREY_INT))
    {
      dstGType = WLZ_GREY_INT;
    }
    else if((*(gTypeA + 0) == WLZ_GREY_SHORT) ||
	    (*(gTypeA + 1) == WLZ_GREY_SHORT) ||
	    (*(gTypeA + 2) == WLZ_GREY_SHORT))
    {
      dstGType = WLZ_GREY_SHORT;
    }
    else if((*(gTypeA + 0) == WLZ_GREY_UBYTE) ||
	    (*(gTypeA + 1) == WLZ_GREY_UBYTE) ||
	    (*(gTypeA + 2) == WLZ_GREY_UBYTE))
    {
      dstGType = WLZ_GREY_SHORT;
    }
    else
    {
      /* RGBA to be done RAB */
      errNum = WLZ_ERR_GREY_TYPE;
    }
  }
  /* Make destination object with intersection domain and new values. */
  if(errNum == WLZ_ERR_NONE)
  {
    (void )WlzValueConvertPixel(&dstBgd, *(bgdA + 0), dstGType);
    dstVal.v = WlzNewValueTb(*(iObjA + 0),
    			     WlzGreyValueTableType(0, WLZ_GREY_TAB_RAGR,
			     dstGType, NULL),
			     dstBgd, &errNum);
    if(errNum == WLZ_ERR_NONE)
    {
      dstObj = WlzMakeMain(WLZ_2D_DOMAINOBJ, istObj->domain, dstVal,
      			   NULL, NULL, &errNum);
    }
  }
  if(istObj)
  {
    WlzFreeObj(istObj);
  }
  /* Make buffers. */
  if(errNum == WLZ_ERR_NONE)
  {
    bufSz = dstObj->domain.i->lastkl - dstObj->domain.i->kol1 + 1;
    if(AlcDouble2Malloc(&iBufA, 3, bufSz) != ALC_ER_NONE)
    {
      errNum = WLZ_ERR_MEM_ALLOC;
    }
  }
  /* Scan through the objects computing the magnitude. */
  if(errNum == WLZ_ERR_NONE)
  {
    idN = 0;
    while((errNum == WLZ_ERR_NONE) && (idN < 3))
    {
      errNum = WlzInitGreyScan(*(iObjA + idN), iIWSpA + idN, iGWSpA + idN);
      ++idN;
    }
    if(errNum == WLZ_ERR_NONE)
    {
      errNum = WlzInitGreyScan(dstObj, &dstIWSp, &dstGWSp);
    }
    while((errNum == WLZ_ERR_NONE) &&
    	  ((errNum = WlzNextGreyInterval(iIWSpA + 0)) == WLZ_ERR_NONE) &&
	  ((errNum = WlzNextGreyInterval(iIWSpA + 1)) == WLZ_ERR_NONE) &&
	  ((errNum = WlzNextGreyInterval(iIWSpA + 2)) == WLZ_ERR_NONE) &&
	  ((errNum = WlzNextGreyInterval(&dstIWSp)) == WLZ_ERR_NONE))
    {
      itvLen = dstIWSp.rgtpos - dstIWSp.lftpos + 1;
      /* Copy intervals to double buffers. */
      idN = 0;
      while(idN < 3)
      {
	tGP0.dbp = *(iBufA + idN);
        WlzValueCopyGreyToGrey(tGP0, 0,
			       WLZ_GREY_DOUBLE,
			       (iGWSpA + idN)->u_grintptr, 0,
			       (iGWSpA + idN)->pixeltype,
			       itvLen);
        ++idN;
      }
      /* Compute magnitude. */
      WlzBufMagD3(*(iBufA + 0), *(iBufA + 1), *(iBufA + 2), itvLen);
      /* Clamp into destination interval. */
      tGP0.dbp = *(iBufA + 0);
      WlzValueClampGreyIntoGrey(dstGWSp.u_grintptr, 0, dstGWSp.pixeltype,
				tGP0, 0, WLZ_GREY_DOUBLE,
				itvLen);
    }
    if(errNum == WLZ_ERR_EOO)
    {
      errNum = WLZ_ERR_NONE;
    }
  }
  /* Free intersection objects. */
  idN = 0;
  while(idN < 3)
  {
    if(iObjA[idN])
    {
      WlzFreeObj(iObjA[idN]);
    }
    ++idN;
  }
  /* Free buffers. */
  if(iBufA)
  {
    Alc2Free((void **)iBufA);
  }
  /* Tidy up on error. */
  if(dstObj && (errNum != WLZ_ERR_NONE))
  {
    WlzFreeObj(dstObj);
    dstObj = NULL;
  }
  /* Pass back error status. */
  if(dstErr)
  {
    *dstErr = errNum;
  }
  return(dstObj);
}