Exemplo n.º 1
0
/* Random partitioning. Sequence partitioning with vertices in random order. */
static int coarse_part_random (
  ZZ *zz,
  HGraph *hg,
  int p,
  float *part_sizes,
  Partition part,
  PHGPartParams *hgp
)
{
    int i, err=0, *order=NULL;
    char *yo = "coarse_part_random";

    if (!(order  = (int*) ZOLTAN_MALLOC (hg->nVtx*sizeof(int)))) {
        ZOLTAN_FREE (&order);
        ZOLTAN_PRINT_ERROR (zz->Proc, yo, "Insufficient memory.");
        return ZOLTAN_MEMERR;
    }
    for (i=0; i<hg->nVtx; i++) {
        order[i] = i;
    }

    /* Randomly permute order array */
    Zoltan_Rand_Perm_Int (order, hg->nVtx, NULL);
        
    /* Call sequence partitioning with random order array. */
    err = seq_part (zz, hg, order, p, part_sizes, part, hgp);

    ZOLTAN_FREE (&order);
    return err;
}
Exemplo n.º 2
0
int Zoltan_PHG_Vertex_Visit_Order(
  ZZ *zz, 
  HGraph *hg, 
  PHGPartParams *hgp, 
  int *order)
{
  int i, j, edge;
  int *ldegree=NULL, *gdegree=NULL; /* local/global degree */
  int *lpins=NULL, *gpins=NULL; /* local/global sum of pins */
  char *yo= "Zoltan_PHG_Vertex_Visit_Order";

  /* Start with linear order. */
  for (i=0; i<hg->nVtx; i++)
    order[i] = i;

  /* Permute order array according to chosen strategy. */
  switch (hgp->visit_order){
    case 0: 
      /* random node visit order (recommended)  */
      /* Synchronize so each proc in column visits in same order */
      Zoltan_Srand_Sync(Zoltan_Rand(NULL), &(hg->comm->RNGState_col),
                        hg->comm->col_comm);
      Zoltan_Rand_Perm_Int (order, hg->nVtx, &(hg->comm->RNGState_col));
      break;

    case 1: 
      /* linear (natural) vertex visit order */
      break;

    case 2:
    {
      /* increasing vertex weight */
      float *tmpvwgt;

      if (hg->VtxWeightDim == 1)
        tmpvwgt = hg->vwgt;
      else {
        /* Sort based on first component of multidimensional weight */
        tmpvwgt = (float *) ZOLTAN_MALLOC(hg->nVtx * sizeof(float));
        for (i = 0; i < hg->nVtx; i++)
          tmpvwgt[i] = hg->vwgt[i*hg->VtxWeightDim];
      } 
      
      Zoltan_quicksort_pointer_inc_float (order, tmpvwgt, 0, hg->nVtx-1);
      if (tmpvwgt != hg->vwgt) ZOLTAN_FREE(&tmpvwgt);
      break;
    }

    case 3: 
      /* increasing vertex degree */
      /* intentionally fall through into next case */
    case 4: 
      /* increasing vertex degree, weighted by # pins */

      /* allocate 4 arrays of size hg->nVtx with a single malloc */
      if (!(ldegree = (int *) ZOLTAN_MALLOC (4*sizeof(int) * hg->nVtx))){
        ZOLTAN_PRINT_WARN(zz->Proc, yo, "Out of memory");
        ZOLTAN_FREE (&ldegree);
        return ZOLTAN_MEMERR;
      }
      /* first local data, then global data */
      lpins = ldegree + hg->nVtx;
      gdegree = lpins + hg->nVtx;
      gpins = gdegree + hg->nVtx;

      /* loop over vertices */
      for (i=0; i<hg->nVtx; i++){
         ldegree[i] = hg->vindex[i+1] - hg->vindex[i]; /* local degree */
         lpins[i] = 0;
         /* loop over edges, sum up #pins */
         for (j= hg->vindex[i]; j < hg->vindex[i+1]; j++) {
           edge = hg->vedge[j];
           lpins[i] += hg->hindex[edge+1] - hg->hindex[edge];
         }
      }

      /* sum up local degrees in each column to get global degrees */
      /* also sum up #pins in same communication */
      MPI_Allreduce(ldegree, gdegree, 2*hg->nVtx, MPI_INT, MPI_SUM, 
         hg->comm->col_comm);

      /* sort by global values. same on every processor. */
      if (hgp->visit_order == 3)
        Zoltan_quicksort_pointer_inc_int_int (order, gdegree, gpins,
          0, hg->nVtx-1);
      else /* hgp->visit_order == 4 */
        Zoltan_quicksort_pointer_inc_int_int (order, gpins, gdegree,
          0, hg->nVtx-1);

      ZOLTAN_FREE (&ldegree);
      break;

    /* add more cases here */
  }

  return ZOLTAN_OK;
}