void block_setRootInstance(Block *block, Segment *segment) {
block = block_getPositiveOrientation(block);
segment = segment_getPositiveOrientation(segment);
assert(block_getInstance(block, segment_getName(segment)) == segment);
end_setRootInstance(block_get5End(block), segment_get5Cap(segment));
end_setRootInstance(block_get3End(block), segment_get3Cap(segment));
}
void testBlock_serialisation(CuTest* testCase) {
cactusBlockTestSetup();
Name rootInstanceName = segment_getName(rootSegment);
Name leaf1InstanceName = segment_getName(leaf1Segment);
Name leaf2InstanceName = segment_getName(leaf2Segment);
int64_t i;
void
*vA =
binaryRepresentation_makeBinaryRepresentation(block,
(void(*)(void *, void(*)(const void *, size_t,
size_t))) block_writeBinaryRepresentation,
&i);
CuAssertTrue(testCase, i > 0);
block_destruct(block);
void *vA2 = vA;
block = block_loadFromBinaryRepresentation(&vA2, flower);
rootSegment
= segment_getReverse(block_getInstance(block, rootInstanceName));
leaf1Segment = block_getInstance(block, leaf1InstanceName);
leaf2Segment = segment_getReverse(block_getInstance(block,
leaf2InstanceName));
free(vA);
nestedTest = 1;
testBlock_getName(testCase);
testBlock_getOrientation(testCase);
testBlock_getReverse(testCase);
testBlock_getLength(testCase);
testBlock_getFlower(testCase);
testBlock_getLeftEnd(testCase);
testBlock_getRightEnd(testCase);
testBlock_getSetRootInstance(testCase);
testBlock_getInstanceNumber(testCase);
testBlock_getInstance(testCase);
testBlock_getFirst(testCase);
testBlock_instanceIterator(testCase);
testBlock_makeNewickString(testCase);
testBlock_getChain(testCase);
testBlock_getSegmentForEvent(testCase);
nestedTest = 0;
cactusBlockTestTeardown();
}
void testBlock_getInstance(CuTest* testCase) {
cactusBlockTestSetup();
CuAssertTrue(testCase, block_getInstance(block, segment_getName(rootSegment)) == segment_getReverse(rootSegment));
CuAssertTrue(testCase, block_getInstance(block, segment_getName(leaf1Segment)) == leaf1Segment);
CuAssertTrue(testCase, block_getInstance(block, segment_getName(leaf2Segment)) == segment_getReverse(leaf2Segment));
CuAssertTrue(testCase, block_getInstance(block_getReverse(block), segment_getName(rootSegment)) == rootSegment);
CuAssertTrue(testCase, block_getInstance(block_getReverse(block), segment_getName(leaf1Segment)) == segment_getReverse(leaf1Segment));
CuAssertTrue(testCase, block_getInstance(block_getReverse(block), segment_getName(leaf2Segment)) == leaf2Segment);
cactusBlockTestTeardown();
}