void COutput::SetCGNS_Connectivity(CConfig *config, CGeometry *geometry, unsigned short iZone) {
#ifdef HAVE_CGNS
/*--- local CGNS variables ---*/
int cgns_file, element_dims, physical_dims, cgns_err;
int cgns_section;
unsigned long iExtIter = config->GetExtIter();
string base_file, buffer, elements_name;
stringstream name, results_file;
bool unsteady = config->GetUnsteady_Simulation();
cgsize_t isize[3][1], elem_start, elem_end;
/*--- Create CGNS base file name ---*/
base_file = config->GetFlow_FileName();
/*--- Add CGNS extension. ---*/
base_file = base_file.append(".cgns");
/*--- Create CGNS results file name ---*/
if (unsteady) {
buffer = config->GetFlow_FileName();
results_file.str(string()); results_file << buffer;
if (((int)iExtIter >= 0) && ((int)iExtIter < 10)) results_file << "_0000" << iExtIter;
if (((int)iExtIter >= 10) && ((int)iExtIter < 100)) results_file << "_000" << iExtIter;
if (((int)iExtIter >= 100) && ((int)iExtIter < 1000)) results_file << "_00" << iExtIter;
if (((int)iExtIter >= 1000) && ((int)iExtIter < 10000)) results_file << "_0" << iExtIter;
if ((int)iExtIter >= 10000) results_file << iExtIter;
results_file << ".cgns";
}
/*--- Write base file if not already done ---*/
if (!wrote_base_file) {
/*--- Write base file ---*/
cgns_err = cg_open((char *)base_file.c_str(), CG_MODE_WRITE, &cgns_file);
if (cgns_err) cg_error_print();
element_dims = geometry->GetnDim(); // Currently only all-2D or all-3D zones permitted
physical_dims = element_dims;
/*--- write CGNS base data (one base assumed currently) ---*/
cgns_err = cg_base_write(cgns_file,"SU2 Base", element_dims, physical_dims, &cgns_base);
if (cgns_err) cg_error_print();
/*--- write CGNS descriptor data ---*/
cgns_err = cg_goto(cgns_file, cgns_base,"end");
if (cgns_err) cg_error_print();
cgns_err = cg_equationset_write(physical_dims);
if (cgns_err) cg_error_print();
/*--- Write governing equations to CGNS file ---*/
cgns_err = cg_goto(cgns_file, cgns_base,"FlowEquationSet_t",1,"end");
if (cgns_err) cg_error_print();
switch (config->GetKind_Solver()) {
case EULER:
cgns_err = cg_governing_write(Euler); break;
case NAVIER_STOKES:
cgns_err = cg_governing_write(NSLaminar); break;
case RANS:
cgns_err = cg_governing_write(NSTurbulent); break;
default:
break; // cgns_err = cg_governing_write(CG_UserDefined);
}
if (cgns_err) cg_error_print();
if (unsteady) cgns_err = cg_simulation_type_write(cgns_file, cgns_base, TimeAccurate);
else cgns_err = cg_simulation_type_write(cgns_file, cgns_base, NonTimeAccurate);
if (cgns_err) cg_error_print();
cgns_err = cg_descriptor_write("Solver Information","SU2");
if (cgns_err) cg_error_print();
isize[0][0] = (cgsize_t)geometry->GetGlobal_nPointDomain(); //; // vertex size
isize[1][0] = (cgsize_t)nGlobal_Elem; // cell size
isize[2][0] = 0; // boundary vertex size (zero if elements not sorted)
/*--- write CGNS zone data ---*/
cgns_err = cg_zone_write(cgns_file, cgns_base,"SU2 Zone", isize[0],Unstructured, &cgns_zone);
if (cgns_err) cg_error_print();
cgns_err = cg_goto(cgns_file, cgns_base,"Zone_t", cgns_zone,"end");
if (cgns_err) cg_error_print();
/*--- Reference Note: CGNS element type list:
NODE, BAR_2, BAR_3, TRI_3, TRI_6, QUAD_4, QUAD_8, QUAD_9, TETRA_4, TETRA_10, PYRA_5,
PYRA_14, PENTA_6, PENTA_15, PENTA_18, HEXA_8, HEXA_20, HEXA_27, MIXED, PYRA_13, NGON_n, NFACE_n ---*/
/*--- Write a CGNS section for each element type ---*/
// ier = cg_section_write(int fn, int B, int Z, char *ElementSectionName, ElementType_t type,
// cgsize_t start, cgsize_t end, int nbndry, cgsize_t *Elements, int *S);
if (nGlobal_Tria > 0) {
elem_start = 1; elem_end = (int)nGlobal_Tria;
cgns_err = cg_section_write(cgns_file, cgns_base, cgns_zone,
"Triangle Elements", TRI_3, elem_start, elem_end,
0,(cgsize_t *)Conn_Tria, &cgns_section);
}
if (nGlobal_Quad > 0) {
elem_start = 1; elem_end = (int)nGlobal_Quad;
cgns_err = cg_section_write(cgns_file, cgns_base, cgns_zone,"Quadrilateral Elements", QUAD_4,
elem_start, elem_end,0,(cgsize_t *)Conn_Quad, &cgns_section);
}
if (nGlobal_Tetr > 0) {
elem_start = 1; elem_end = (int)nGlobal_Tetr;
cgns_err = cg_section_write(cgns_file, cgns_base, cgns_zone,"Tetrahedral Elements", TETRA_4,
elem_start, elem_end,0,(cgsize_t *)Conn_Tetr, &cgns_section);
}
if (nGlobal_Hexa > 0) {
elem_start = 1; elem_end = (int)nGlobal_Hexa;
cgns_err = cg_section_write(cgns_file, cgns_base, cgns_zone,"Hexahedral Elements", HEXA_8,
elem_start, elem_end,0,(cgsize_t *)Conn_Hexa, &cgns_section);
}
if (nGlobal_Pyra > 0) {
elem_start = 1; elem_end = (int)nGlobal_Pyra;
cgns_err = cg_section_write(cgns_file, cgns_base, cgns_zone,"Pyramid Elements", PYRA_5,
elem_start, elem_end,0,(cgsize_t *)Conn_Pyra, &cgns_section);
}
if (nGlobal_Pris > 0) {
elem_start = 1; elem_end = (int)nGlobal_Pris;
cgns_err = cg_section_write(cgns_file, cgns_base, cgns_zone,"Prism Elements", PENTA_6,
elem_start, elem_end,0,(cgsize_t *)Conn_Pris, &cgns_section);
}
if (nGlobal_Line > 0) {
elem_start = 1; elem_end = (int)nGlobal_Line;
cgns_err = cg_section_write(cgns_file, cgns_base, cgns_zone,"Line Elements", BAR_2,
elem_start, elem_end,0,(cgsize_t *)Conn_Line, &cgns_section);
}
if (cgns_err) cg_error_print();
cgns_err = cg_close(cgns_file);
if (cgns_err) cg_error_print();
}
#else // Not built with CGNS support
cout << "CGNS file requested but SU2 was built without CGNS support. No file written" << "\n";
#endif
}
void COutput::SetCGNS_Connectivity(CConfig *config, CGeometry *geometry, unsigned short iZone) {
#ifndef NO_CGNS
/*--- local CGNS variables ---*/
int cgns_file,element_dims,physical_dims,cgns_err;
int cgns_section;
unsigned long iExtIter = config->GetExtIter();
string base_file, buffer, elements_name;
stringstream name, results_file;
bool unsteady = config->GetUnsteady_Simulation();
cgsize_t isize[3][1], elem_start, elem_end, N;
bool compressible = (config->GetKind_Regime() == COMPRESSIBLE);
bool incompressible = (config->GetKind_Regime() == INCOMPRESSIBLE);
bool freesurface = (config->GetKind_Regime() == FREESURFACE);
/*--- Create CGNS base file name ---*/
base_file = config->GetFlow_FileName();
#ifndef NO_MPI
/*--- Remove the domain number from the CGNS filename ---*/
int nProcessor;
#ifdef WINDOWS
MPI_Comm_size(MPI_COMM_WORLD,&nProcessor);
#else
nProcessor = MPI::COMM_WORLD.Get_size();
#endif
if (nProcessor > 1) base_file.erase (base_file.end()-2, base_file.end());
#endif
/*--- Add CGNS extension. ---*/
base_file = base_file.append(".cgns");
/*--- Create CGNS results file name ---*/
if (unsteady) {
buffer = config->GetFlow_FileName();
#ifndef NO_MPI
/*--- Remove the domain number from the CGNS filename ---*/
if (nProcessor > 1) buffer.erase (buffer.end()-2, buffer.end());
#endif
results_file.str(string()); results_file << buffer;
if (((int)iExtIter >= 0) && ((int)iExtIter < 10)) results_file << "_0000" << iExtIter;
if (((int)iExtIter >= 10) && ((int)iExtIter < 100)) results_file << "_000" << iExtIter;
if (((int)iExtIter >= 100) && ((int)iExtIter < 1000)) results_file << "_00" << iExtIter;
if (((int)iExtIter >= 1000) && ((int)iExtIter < 10000)) results_file << "_0" << iExtIter;
if ((int)iExtIter >= 10000) results_file << iExtIter;
results_file << ".cgns";
}
/*--- Write base file if not already done ---*/
if (!wrote_base_file) {
/*--- Write base file ---*/
cgns_err = cg_open((char *)base_file.c_str(),CG_MODE_WRITE,&cgns_file);
if (cgns_err) cg_error_print();
element_dims = geometry->GetnDim(); // Currently (release 2.0) only all-2D or all-3D zones permitted
physical_dims = element_dims;
/*--- write CGNS base data (one base assumed as of version 3.1.0 "eagle") ---*/
cgns_err = cg_base_write(cgns_file,"SU^2 Base",element_dims,physical_dims,&cgns_base);
if (cgns_err) cg_error_print();
/*--- write CGNS descriptor data ---*/
cgns_err = cg_goto(cgns_file,cgns_base,"end");
if (cgns_err) cg_error_print();
cgns_err = cg_equationset_write(physical_dims);
if (cgns_err) cg_error_print();
/*--- Write governing equations to CGNS file ---*/
cgns_err = cg_goto(cgns_file,cgns_base,"FlowEquationSet_t",1,"end");
if (cgns_err) cg_error_print();
if (compressible) {
switch (config->GetKind_Solver()) {
case EULER:
cgns_err = cg_governing_write(Euler); break;
case NAVIER_STOKES:
cgns_err = cg_governing_write(NSLaminar); break;
case RANS:
cgns_err = cg_governing_write(NSTurbulent); break;
default:
break; // cgns_err = cg_governing_write(CG_UserDefined);
}
if (cgns_err) cg_error_print();
}
if (unsteady) cgns_err = cg_simulation_type_write(cgns_file,cgns_base,TimeAccurate);
else cgns_err = cg_simulation_type_write(cgns_file,cgns_base,NonTimeAccurate);
if (cgns_err) cg_error_print();
cgns_err = cg_descriptor_write("Solver Information","SU^2 version 3.1.0 \"eagle\", Stanford University Aerospace Design Lab");
if (cgns_err) cg_error_print();
isize[0][0] = geometry->GetGlobal_nPointDomain(); //; // vertex size
isize[1][0] = nGlobal_Elem; // cell size
isize[2][0] = 0; // boundary vertex size (zero if elements not sorted)
/*--- write CGNS zone data ---*/
cgns_err = cg_zone_write(cgns_file,cgns_base,"SU^2 Zone",isize[0],Unstructured,&cgns_zone);
if (cgns_err) cg_error_print();
cgns_err = cg_goto(cgns_file,cgns_base,"Zone_t",cgns_zone,"end");
if (cgns_err) cg_error_print();
/*--- Reference Note: CGNS element type list:
NODE, BAR_2, BAR_3, TRI_3, TRI_6, QUAD_4, QUAD_8, QUAD_9, TETRA_4, TETRA_10, PYRA_5,
PYRA_14, PENTA_6, PENTA_15, PENTA_18, HEXA_8, HEXA_20, HEXA_27, MIXED, PYRA_13, NGON_n, NFACE_n ---*/
/*--- Write a CGNS section for each element type ---*/
// ier = cg_section_write(int fn, int B, int Z, char *ElementSectionName, ElementType_t type,
// cgsize_t start, cgsize_t end, int nbndry, cgsize_t *Elements, int *S);
if (nGlobal_Tria > 0) {
elem_start = 1; elem_end = (int)nGlobal_Tria;
N = (int)nGlobal_Tria*N_POINTS_TRIANGLE;
cgns_err = cg_section_write(cgns_file,cgns_base,cgns_zone,
"Triangle Elements",TRI_3,elem_start,elem_end,
0,(cgsize_t *)Conn_Tria,&cgns_section);
}
if (nGlobal_Quad > 0) {
elem_start = 1; elem_end = (int)nGlobal_Quad; N = (int)nGlobal_Quad*N_POINTS_QUADRILATERAL;
cgns_err = cg_section_write(cgns_file,cgns_base,cgns_zone,"Quadrilateral Elements",QUAD_4,
elem_start,elem_end,0,(cgsize_t *)Conn_Quad,&cgns_section);
}
if (nGlobal_Tetr > 0) {
elem_start = 1; elem_end = (int)nGlobal_Tetr; N = (int)nGlobal_Tetr*N_POINTS_TETRAHEDRON;
cgns_err = cg_section_write(cgns_file,cgns_base,cgns_zone,"Tetrahedral Elements",TETRA_4,
elem_start,elem_end,0,(cgsize_t *)Conn_Tetr,&cgns_section);
}
if (nGlobal_Hexa > 0) {
elem_start = 1; elem_end = (int)nGlobal_Hexa; N = (int)nGlobal_Hexa*N_POINTS_HEXAHEDRON;
cgns_err = cg_section_write(cgns_file,cgns_base,cgns_zone,"Hexahedral Elements",HEXA_8,
elem_start,elem_end,0,(cgsize_t *)Conn_Hexa,&cgns_section);
}
if (nGlobal_Pyra > 0) {
elem_start = 1; elem_end = (int)nGlobal_Pyra; N = (int)nGlobal_Pyra*N_POINTS_PYRAMID;
cgns_err = cg_section_write(cgns_file,cgns_base,cgns_zone,"Pyramid Elements",PYRA_5,
elem_start,elem_end,0,(cgsize_t *)Conn_Pyra,&cgns_section);
}
if (nGlobal_Wedg > 0) {
elem_start = 1; elem_end = (int)nGlobal_Wedg; N = (int)nGlobal_Wedg*N_POINTS_WEDGE;
cgns_err = cg_section_write(cgns_file,cgns_base,cgns_zone,"Wedge Elements",PENTA_6,
elem_start,elem_end,0,(cgsize_t *)Conn_Wedg,&cgns_section);
}
if (nGlobal_Line > 0) {
elem_start = 1; elem_end = (int)nGlobal_Line; N = (int)nGlobal_Line*N_POINTS_LINE;
cgns_err = cg_section_write(cgns_file,cgns_base,cgns_zone,"Line Elements",BAR_2,
elem_start,elem_end,0,(cgsize_t *)Conn_Line,&cgns_section);
}
if (cgns_err) cg_error_print();
cgns_err = cg_close(cgns_file);
if (cgns_err) cg_error_print();
}
#else // Not built with CGNS support
cout << "CGNS file requested but SU^2 was built without CGNS support. No file written" << "\n";
#endif
}