Exemplos de display_map_usage em C++ (Cpp)

Exemplo n.º 1

Arquivo: map.c Projeto: Bioinfo-Tools/PANGEA-plus

void initenv ( int argc, char ** argv )
{
	int copt;
	int inpseq, outseq;
	extern char * optarg;
	char temp[100];
	optind = 1;
	inpseq = outseq = 0;

	while ( ( copt = getopt ( argc, argv, "s:g:K:p:" ) ) != EOF )
	{
		//printf("get option\n");
		switch ( copt )
		{
			case 's':
				inpseq = 1;
				sscanf ( optarg, "%s", shortrdsfile );
				continue;
			case 'g':
				outseq = 1;
				sscanf ( optarg, "%s", graphfile ); //
				continue;
			case 'K':
				sscanf ( optarg, "%s", temp ); //
				overlaplen = atoi ( temp );
				continue;
			case 'p':
				sscanf ( optarg, "%s", temp ); //
				thrd_num = atoi ( temp );
				continue;
			default:

				if ( inpseq == 0 || outseq == 0 )       //
				{
					display_map_usage();
					exit ( 1 );
				}
		}
	}

	if ( inpseq == 0 || outseq == 0 )  //
	{
		//printf("need more\n");
		display_map_usage();
		exit ( 1 );
	}
}

Exemplo n.º 2

Arquivo: map.c Projeto: Buttonwood/SOAPdenovo2

void initenv ( int argc, char ** argv )
{
	int copt;
	int inpseq, outseq;
	extern char * optarg;
	char temp[100];
	optind = 1;
	inpseq = outseq = 0;
	fprintf ( stderr, "Parameters: map " );

	while ( ( copt = getopt ( argc, argv, "s:g:K:p:k:f" ) ) != EOF )
	{
		//printf("get option\n");
		switch ( copt )
		{
			case 's':
				fprintf ( stderr, "-s %s ", optarg );
				inpseq = 1;
				sscanf ( optarg, "%s", shortrdsfile );
				break;
			case 'g':
				fprintf ( stderr, "-g %s ", optarg );
				outseq = 1;
				sscanf ( optarg, "%s", graphfile );
				break;
			case 'K':
				fprintf ( stderr, "-K %s ", optarg );
				sscanf ( optarg, "%s", temp );
				overlaplen = atoi ( temp );
				break;
			case 'p':
				fprintf ( stderr, "-p %s ", optarg );
				sscanf ( optarg, "%s", temp );
				thrd_num = atoi ( temp );
				break;
			case 'k':
				fprintf ( stderr, "-k %s ", optarg );
				sscanf ( optarg, "%s", temp );
				smallKmer = atoi ( temp );
				break;
			case 'f':
				fill = 1;
				fprintf ( stderr, "-f " );
				break;
			default:

				if ( inpseq == 0 || outseq == 0 )
				{
					display_map_usage ();
					exit ( 1 );
				}
		}
	}

	fprintf ( stderr, "\n\n" );

	if ( inpseq == 0 || outseq == 0 )
	{
		display_map_usage ();
		exit ( 1 );
	}
}