int CellMLModelDefinition::setVariableAsKnown(const char* name)
{
std::vector<iface::cellml_services::VariableEvaluationType> vets;
// initially, only allow parameters to be controlled by OpenCMISS(cm)
vets.push_back(iface::cellml_services::CONSTANT);
//vets.push_back(iface::cellml_services::VARIABLE_OF_INTEGRATION);
//vets.push_back(iface::cellml_services::FLOATING);
int code = flagVariable(this,name,L"KNOWN",vets,mNumberOfKnownVariables,mParameterCounter);
return code;
}
int CellMLModelDefinition::setVariableAsWanted(const char* name)
{
std::vector<iface::cellml_services::VariableEvaluationType> vets;
// can't flag state variables
//vets.push_back(iface::cellml_services::STATE_VARIABLE);
vets.push_back(iface::cellml_services::PSEUDOSTATE_VARIABLE);
vets.push_back(iface::cellml_services::ALGEBRAIC);
//vets.push_back(iface::cellml_services::LOCALLY_BOUND);
// we need to allow constant variables to be flagged as wanted since if it is a model with no
// differential equations then all algebraic variables will be constant - i.e., constitutive laws
vets.push_back(iface::cellml_services::CONSTANT);
int code = flagVariable(this,name,L"WANTED",vets,mNumberOfWantedVariables,mIntermediateCounter);
return code;
}
int CellmlModelDefinition::setVariableAsInput(const std::string &variableId)
{
std::cout << "CellmlModelDefinition::setVariableAsInput: flagging variable: " << variableId
<< "; as a INPUT variable." << std::endl;
std::vector<iface::cellml_services::VariableEvaluationType> vets;
// initially, only allow "constant" variables to be defined externally
vets.push_back(iface::cellml_services::CONSTANT);
//vets.push_back(iface::cellml_services::VARIABLE_OF_INTEGRATION);
//vets.push_back(iface::cellml_services::FLOATING);
int index = flagVariable(variableId, csim::InputType, vets,
mNumberOfInputVariables, mCapi,
mVariableTypes, mVariableIndices);
return index;
}
int CellmlModelDefinition::setVariableAsOutput(const std::string &variableId)
{
std::cout << "CellmlModelDefinition::setVariableAsOutput: flagging variable: " << variableId
<< "; as a OUTPUT variable." << std::endl;
std::vector<iface::cellml_services::VariableEvaluationType> vets;
// state variables should be flagged if they need to be copied into the wanted array
vets.push_back(iface::cellml_services::STATE_VARIABLE);
vets.push_back(iface::cellml_services::PSEUDOSTATE_VARIABLE);
vets.push_back(iface::cellml_services::ALGEBRAIC);
//vets.push_back(iface::cellml_services::LOCALLY_BOUND);
// we need to allow constant variables to be flagged as wanted since if it is a model with no
// differential equations then all algebraic variables will be constant - i.e., constitutive laws
vets.push_back(iface::cellml_services::CONSTANT);
vets.push_back(iface::cellml_services::VARIABLE_OF_INTEGRATION);
int index = flagVariable(variableId, csim::OutputType, vets,
mNumberOfOutputVariables, mCapi, mVariableTypes,
mVariableIndices);
return index;
}