void funcInputData()
{
/* Example of Input files :
* numberofInputs (not existing now)
* NameofRNA
* ProteinSequence
* ... * numberofInputs
*
* CDSforA
* 455 1000
* (string of sequences~)
* ... * numberofInputs
*/
pFONTElementRef->ToElement()->SetAttribute("face", "consolas");
structRna xRna[4]; // Assume there is only 4 input.
int iNumberofInput ; // Fix variable for now, but made for If there are more inputs
//Deal with Proteins
std::ifstream fileToRead("data.txt");
fileToRead >> iNumberofInput;
{
std::string tmpFlush;
getline(fileToRead, tmpFlush);
}
for(int xIterator = 0 ; xIterator < iNumberofInput ; ++xIterator )
{
getline( fileToRead, xRna[xIterator].sName );
getline( fileToRead, xRna[xIterator].sProteinSequence );
}
funcCompare(xRna, iNumberofInput);
//Deal with Sequences
for(int xIterator = 0 ; xIterator < iNumberofInput ; ++xIterator )
{
int tmpCDSstarts;
int tmpCDSends;
std::string tmpString;
fileToRead >> tmpCDSstarts >> tmpCDSends;
fileToRead >> tmpString;
for(int xCurrentPos = tmpCDSstarts-1 ; xCurrentPos < tmpCDSends ; ++xCurrentPos){
xRna[xIterator].sSequenceBetweenCDS.push_back(tmpString[xCurrentPos]);
} // inner for
} // outer for
funcSequenceCompare(xRna, iNumberofInput);
}
/**
* Merge left and right lists into a new list.
*/
static listnode_t *mergeLists(listnode_t *left, listnode_t *right,
comparefunc funcCompare)
{
listnode_t tmp, *np;
np = &tmp;
tmp.next = np;
while(left != NULL && right != NULL)
{
if(funcCompare(left->data, right->data) <= 0)
{
np->next = left;
np = left;
left = left->next;
}
else
{
np->next = right;
np = right;
right = right->next;
}
}
// At least one of these lists is now empty.
if(left)
np->next = left;
if(right)
np->next = right;
// Is the list empty?
if(tmp.next == &tmp)
return NULL;
return tmp.next;
}
