Exemplo n.º 1
0
static bool read_poly(int dataset, VarInfo6& info)
{
    int complex = 0;
    int size = getDimsNode(dataset, &complex, info.pdims);
    info.size = 0;

    //open __refs__ node
    int refs = getDataSetIdFromName(dataset, "__refs__");

    for (int i = 0; i < size; ++i)
    {
        std::string polyname(std::to_string(i));
        int poly = getDataSetIdFromName(refs, polyname.data());

        //get dims
        complex = 0;
        int dims = 0;
        int ret = getDatasetInfo(poly, &complex, &dims, NULL);
        if (ret < 0)
        {
            return false;
        }

        std::vector<int> d(dims);
        int datasize = getDatasetInfo(poly, &complex, &dims, d.data());
        info.size += datasize * sizeof(double) * (complex + 1);
    }

    closeList6(refs);
    closeList6(dataset);

    generateInfo(info);
    return true;
}
Exemplo n.º 2
0
static types::InternalType* import_cell(int dataset)
{
    //get sparse dimensions
    int complex = 0;
    std::vector<int> pdims;
    int size = getDimsNode(dataset, &complex, pdims);

    if (size == 0)
    {
        closeList6(dataset);
        return new types::Cell();
    }

    //open __refs__ node
    int refs = getDataSetIdFromName(dataset, "__refs__");
    std::vector<types::InternalType*> data(size);
    for (int i = 0; i < size; ++i)
    {
        int ref = getDataSetIdFromName(refs, std::to_string(i).data());
        types::InternalType* val = import_data(ref);
        if (val == nullptr)
        {
            return nullptr;
        }

        data[i] = val;
    }

    types::Cell* cell = new types::Cell(static_cast<int>(pdims.size()), pdims.data(), data.data());

    closeList6(refs);
    closeList6(dataset);
    return cell;
}
Exemplo n.º 3
0
static types::InternalType* import_boolean_sparse(int dataset)
{
    //get sparse dimensions
    int complex = 0;
    std::vector<int> pdims;
    int size = getDimsNode(dataset, &complex, pdims);

    //get non zeros count
    int nnz = 0;
    int datannz = getDataSetIdFromName(dataset, "__nnz__");
    readInteger32Matrix(datannz, &nnz);

    if (nnz == 0)
    {
        closeList6(dataset);
        return new types::SparseBool(pdims[0], pdims[1]);
    }

    //get inner vector
    int datain = getDataSetIdFromName(dataset, "__inner__");
    int dimin = 0;
    int sizein = getDatasetInfo(datain, &complex, &dimin, NULL);
    std::vector<int> dimsin(dimin);
    sizein = getDatasetInfo(datain, &complex, &dimin, dimsin.data());

    std::vector<int> in(sizein);
    int ret = readInteger32Matrix(datain, in.data());
    if (ret < 0)
    {
        closeList6(dataset);
        return nullptr;
    }

    //get outer vector
    int dataout = getDataSetIdFromName(dataset, "__outer__");
    int dimout = 0;
    int sizeout = getDatasetInfo(dataout, &complex, &dimout, NULL);
    std::vector<int> dimsout(dimout);
    sizeout = getDatasetInfo(dataout, &complex, &dimout, dimsout.data());

    std::vector<int> out(sizeout);
    ret = readInteger32Matrix(dataout, out.data());
    if (ret < 0)
    {
        closeList6(dataset);
        return nullptr;
    }

    closeList6(dataset);

    return new types::SparseBool(pdims[0], pdims[1], nnz, in.data(), out.data());
}
Exemplo n.º 4
0
static int getDimsNode(int dataset, int* complex, std::vector<int>& dims)
{
    dims.clear();
    int id = getDataSetIdFromName(dataset, "__dims__");
    if (id < 0)
    {
        return 0;
    }

    //get dims dimension count
    int dim = 0;
    getDatasetInfo(id, complex, &dim, NULL);
    //get dims dimension
    std::vector<int> d(dim);
    int size = getDatasetInfo(id, complex, &dim, d.data());

    //get dims value
    dims.resize(size);
    readInteger32Matrix(id, dims.data());

    size = dims[0];
    for (int i = 1; i < dims.size(); ++i)
    {
        size *= dims[i];
    }
    return size;
}
Exemplo n.º 5
0
static bool import_variable(int file, std::string& name)
{
    int dataset = getDataSetIdFromName(file, name.data());
    if (dataset <= 0)
    {
        return false;
    }

    types::InternalType* data = import_data(dataset);
    if (data != nullptr)
    {
        wchar_t* var = to_wide_string(name.data());
        //update macro name
        if (data->isMacro())
        {
            types::Macro* macro = data->getAs<types::Macro>();
            macro->setName(var);
            symbol::Context::getInstance()->addMacro(macro);
        }
        else
        {
            //add to context
            symbol::Context::getInstance()->put(symbol::Symbol(var), data);
        }
        FREE(var);
        return true;
    }

    return false;
}
Exemplo n.º 6
0
static bool import_variable(int* pvCtx, int _iFile, char* _pstVarName)
{
    int iDataSetId = getDataSetIdFromName(_iFile, _pstVarName);
    if (iDataSetId <= 0)
    {
        return false;
    }

    return import_data(pvCtx, iDataSetId, 0, NULL, _pstVarName);
}
Exemplo n.º 7
0
static bool read_cell(int dataset, VarInfo6& info)
{
    //get cell dimensions
    int complex = 0;
    int size = getDimsNode(dataset, &complex, info.pdims);
    info.dims = static_cast<int>(info.pdims.size());

    if (size == 0)
    {
        info.size = 0;
        generateInfo(info);
        closeList6(dataset);
        return true;
    }

    //open __refs__ node
    int refs = getDataSetIdFromName(dataset, "__refs__");
    for (int i = 0; i < size; ++i)
    {
        int ref = getDataSetIdFromName(refs, std::to_string(i).data());
        VarInfo6 info2;
        if (read_data(ref, info2) == false)
        {
            closeList6(refs);
            closeList6(dataset);
            return false;
        }

        info.size += info2.size;
    }

    closeList6(refs);
    closeList6(dataset);

    generateInfo(info);
    return true;
}
Exemplo n.º 8
0
static types::InternalType* import_list(int dataset, types::List* lst)
{
    int count = 0;
    int ret  = getListDims6(dataset, &count);
    if (ret)
    {
        closeList6(dataset);
        delete lst;
        return nullptr;
    }

    if (count == 0)
    {
        closeList6(dataset);
        return lst;
    }

    //get children

    for (int i = 0; i < count; ++i)
    {
        int data = getDataSetIdFromName(dataset, std::to_string(i).data());
        if (data <= 0)
        {
            closeList6(dataset);
            delete lst;
            return nullptr;
        }

        types::InternalType* child = import_data(data);
        if (child == nullptr)
        {
            closeList6(dataset);
            delete lst;
            return nullptr;
        }

        lst->append(child);
        if (child->isList())
        {
            child->killMe();
        }
    }

    closeList6(dataset);
    return lst;
}
Exemplo n.º 9
0
static bool read_boolean_sparse(int dataset, VarInfo6& info)
{
    int complex = 0;
    std::vector<int> pdims;
    int size = getDimsNode(dataset, &complex, pdims);

    //get non zeros count
    int nnz = 0;
    int datannz = getDataSetIdFromName(dataset, "__nnz__");
    readInteger32Matrix(datannz, &nnz);

    info.dims = 2;
    info.pdims[0] = pdims[0];
    info.pdims[1] = pdims[1];
    //rows(int) + nnz(int)
    info.size = info.pdims[0] * sizeof(int) + nnz * sizeof(int);

    generateInfo(info);
    closeList6(dataset);
    return true;
}
Exemplo n.º 10
0
static bool read_list(int dataset, VarInfo6& info, std::string type)
{
    int ret = 0;
    int items = 0;

    ret = getListDims6(dataset, &items);
    if (ret)
    {
        return false;
    }

    info.dims = 1;
    info.pdims.resize(1);
    info.pdims[0] = items;
    info.size = 0;

    for (int i = 0; i < items; i++)
    {
        int data = getDataSetIdFromName(dataset, std::to_string(i).data());
        if (data <= 0)
        {
            closeList6(dataset);
            return false;
        }


        VarInfo6 info2;
        bool bRet = read_data(data, info2);
        if (bRet == false)
        {
            return false;
        }

        info.size += info2.size;
    }

    closeList6(dataset);
    generateInfo(info);
    return true;
}
Exemplo n.º 11
0
int sci_hdf5_listvar_v2(char *fname, int* pvApiCtx)
{
    SciErr sciErr;
    int *piAddr     = NULL;
    char* pstFile   = NULL;
    int iFile       = 0;
    int iNbItem     = 0;
    VarInfo* pInfo  = NULL;
    const int nbIn = nbInputArgument(pvApiCtx);

    CheckInputArgument(pvApiCtx, 1, 1);
    CheckOutputArgument(pvApiCtx, 1, 4);

    sciErr = getVarAddressFromPosition(pvApiCtx, 1, &piAddr);
    if (sciErr.iErr)
    {
        printError(&sciErr, 0);
        return 1;
    }

    if (getAllocatedSingleString(pvApiCtx, piAddr, &pstFile))
    {
        if (pstFile)
        {
            FREE(pstFile);
        }

        Scierror(999, _("%s: Wrong size for input argument #%d: A string expected.\n"), fname, 1);
        return 1;
    }

    char* pstFileName = expandPathVariable(pstFile);
    iFile = openHDF5File(pstFileName, 0);
    if (iFile < 0)
    {
        Scierror(999, _("%s: Unable to open file: %s\n"), fname, pstFile);
        FREE(pstFileName);
        FREE(pstFile);
        return 1;
    }

    FREE(pstFileName);
    FREE(pstFile);

    //manage version information
    int iVersion = getSODFormatAttribute(iFile);
    if (iVersion != SOD_FILE_VERSION)
    {
        if (iVersion > SOD_FILE_VERSION)
        {
            //can't read file with version newer that me !
            closeHDF5File(iFile);
            Scierror(999, _("%s: Wrong SOD file format version. Max Expected: %d Found: %d\n"), fname, SOD_FILE_VERSION, iVersion);
            return 1;
        }
        else
        {
            //call older import functions and exit or ... EXIT !
            if (iVersion == 1 || iVersion == -1)
            {
                //sciprint("old sci_listvar_in_hdf5_v1\n");
                return sci_listvar_in_hdf5_v1(fname, pvApiCtx);
            }
        }
    }

    iNbItem = getVariableNames(iFile, NULL);
    if (iNbItem != 0)
    {
        char** pstVarNameList = (char**)MALLOC(sizeof(char*) * iNbItem);
        pInfo = (VarInfo*)MALLOC(iNbItem * sizeof(VarInfo));
        int b;

        if (Lhs == 1)
        {
            sciprint("Name                     Type           Size            Bytes\n");
            sciprint("---------------------------------------------------------------\n");
        }

        iNbItem = getVariableNames(iFile, pstVarNameList);
        for (int i = 0; i < iNbItem; i++)
        {
            int iDataSetId = getDataSetIdFromName(iFile, pstVarNameList[i]);
            if (iDataSetId == 0)
            {
                break;
            }

            strncpy(pInfo[i].varName, pstVarNameList[i], sizeof(pInfo[i].varName) - 1);
            pInfo[i].iSize = 0;
            b = read_data(iDataSetId, 0, NULL, &pInfo[i]) == false;
            if (b)
            {
                break;
            }

            if (Lhs == 1)
            {
                sciprint("%s\n", pInfo[i].pstInfo);
            }
        }

        freeArrayOfString(pstVarNameList, iNbItem);
    }
    else
    {
        //no variable returms [] for each Lhs
        for (int i = 0 ; i < Lhs ; i++)
        {
            createEmptyMatrix(pvApiCtx, nbIn + i + 1);
            AssignOutputVariable(pvApiCtx, i + 1) = nbIn + i + 1;
        }

        ReturnArguments(pvApiCtx);
        return 0;
    }

    closeHDF5File(iFile);

    //1st Lhs
    char** pstVarName = (char**)MALLOC(sizeof(char*) * iNbItem);
    for (int i = 0 ; i < iNbItem ; i++)
    {
        pstVarName[i] = pInfo[i].varName;
    }

    sciErr = createMatrixOfString(pvApiCtx, nbIn + 1, iNbItem, 1, pstVarName);
    FREE(pstVarName);
    if (sciErr.iErr)
    {
        FREE(pInfo);
        printError(&sciErr, 0);
        return 1;
    }

    AssignOutputVariable(pvApiCtx, 1) = nbIn + 1;

    if (Lhs > 1)
    {
        //2nd Lhs
        double* pdblType;
        sciErr = allocMatrixOfDouble(pvApiCtx, nbIn + 2, iNbItem, 1, &pdblType);
        if (sciErr.iErr)
        {
            printError(&sciErr, 0);
            FREE(pInfo);
            return 1;
        }

        for (int i = 0 ; i < iNbItem ; i++)
        {
            pdblType[i] = pInfo[i].iType;
        }

        AssignOutputVariable(pvApiCtx, 2) = nbIn + 2;

        if (Lhs > 2)
        {
            //3rd Lhs
            int* pList = NULL;
            sciErr = createList(pvApiCtx, nbIn + 3, iNbItem, &pList);
            for (int i = 0 ; i < iNbItem ; i++)
            {
                double* pdblDims = NULL;
                allocMatrixOfDoubleInList(pvApiCtx, nbIn + 3, pList, i + 1, 1, pInfo[i].iDims, &pdblDims);
                for (int j = 0 ; j < pInfo[i].iDims ; j++)
                {
                    pdblDims[j] = pInfo[i].piDims[j];
                }
            }

            AssignOutputVariable(pvApiCtx, 3) = nbIn + 3;
        }

        if (Lhs > 3)
        {
            //4th Lhs
            double* pdblSize = NULL;
            sciErr = allocMatrixOfDouble(pvApiCtx, nbIn + 4, iNbItem, 1, &pdblSize);
            for (int i = 0 ; i < iNbItem ; i++)
            {
                pdblSize[i] = pInfo[i].iSize;
            }

            AssignOutputVariable(pvApiCtx, 4) = nbIn + 4;
        }

    }

    FREE(pInfo);
    ReturnArguments(pvApiCtx);
    return 0;
}
Exemplo n.º 12
0
types::Function::ReturnValue sci_hdf5_listvar_v3(types::typed_list &in, int _iRetCount, types::typed_list &out)
{
    int rhs = static_cast<int>(in.size());
    if (rhs != 1)
    {
        Scierror(999, _("%s: Wrong number of input argument(s): %d expected.\n"), fname.data(), 1);
        return types::Function::Error;
    }

    if (_iRetCount < 1 && _iRetCount > 4)
    {
        Scierror(999, _("%s: Wrong number of output argument(s): %d to %d expected.\n"), fname.data(), 1, 4);
        return types::Function::Error;
    }

    //get filename
    if (in[0]->getId() != types::InternalType::IdScalarString)
    {
        Scierror(999, _("%s: Wrong size for input argument #%d: A string expected.\n"), fname.data(), 1);
        return types::Function::Error;
    }

    //open hdf5 file
    wchar_t* wfilename = expandPathVariableW(in[0]->getAs<types::String>()->get()[0]);
    char* cfilename = wide_string_to_UTF8(wfilename);
    std::string filename = cfilename;
    FREE(wfilename);
    FREE(cfilename);

    int iFile = openHDF5File(filename.data(), 0);
    if (iFile < 0)
    {
        Scierror(999, _("%s: Unable to open file: %s\n"), fname.data(), filename.data());
        return types::Function::Error;
    }

    //manage version information
    int iVersion = getSODFormatAttribute(iFile);
    if (iVersion != SOD_FILE_VERSION)
    {
        //can't read file with version newer that me !
        closeHDF5File(iFile);
        Scierror(999, _("%s: Wrong SOD file format version. Max Expected: %d Found: %d\n"), fname.data(), SOD_FILE_VERSION, iVersion);
        return types::Function::Error;
    }

    int items = getVariableNames6(iFile, nullptr);
    std::vector<VarInfo6> info(items);
    if (items != 0)
    {
        std::vector<char*> vars(items);
        items = getVariableNames6(iFile, vars.data());

        if (_iRetCount == 1)
        {
            sciprint("Name                     Type           Size            Bytes\n");
            sciprint("-------------------------------------------------------------\n");
        }

        for (int i = 0; i < items; i++)
        {
            info[i].name = vars[i];
            FREE(vars[i]);
            info[i].size = 0;

            int dset = getDataSetIdFromName(iFile, info[i].name.data());
            if (dset == 0)
            {
                break;
            }


            if (_iRetCount != 2)
            {
                if (read_data(dset, info[i]) == false)
                {
                    break;
                }

                if (_iRetCount == 1)
                {
                    sciprint("%s\n", info[i].info);
                }
            }
            else // == 2
            {
                if (read_short_data(dset, info[i]) == false)
                {
                    break;
                }
            }
        }
    }
    else
    {
        //no variable returms [] for each Lhs
        for (int i = 0; i < _iRetCount; i++)
        {
            out.push_back(types::Double::Empty());
        }

        return types::Function::OK;
    }

    closeHDF5File(iFile);

    //1st Lhs
    types::String* out1 = new types::String(items, 1);
    for (int i = 0; i < items; i++)
    {
        out1->set(i, info[i].name.data());
    }

    out.push_back(out1);

    //2nd
    if (_iRetCount > 1)
    {
        types::Double* out2 = new types::Double(items, 1);
        double* pout2 = out2->get();
        for (int i = 0; i < items; i++)
        {
            pout2[i] = info[i].type;
        }

        out.push_back(out2);
    }

    if (_iRetCount > 2)
    {
        //3rd Lhs
        types::List* out3 = new types::List();
        for (int i = 0; i < items; i++)
        {
            int dims = info[i].dims;
            types::Double* item = new types::Double(1, dims);
            double* pitem = item->get();
            for (int j = 0; j < dims; j++)
            {
                pitem[j] = static_cast<double>(info[i].pdims[j]);
            }

            out3->append(item);
        }

        out.push_back(out3);
    }

    if (_iRetCount > 3)
    {
        //4th Lhs
        types::Double* out4 = new types::Double(items, 1);
        double* pout4 = out4->get();
        for (int i = 0; i < items; i++)
        {
            pout4[i] = info[i].size;
        }

        out.push_back(out4);
    }

    return types::Function::OK;
}
Exemplo n.º 13
0
static bool read_struct(int dataset, VarInfo6& info)
{
    int complex = 0;
    int size = getDimsNode(dataset, &complex, info.pdims);
    info.dims = static_cast<int>(info.pdims.size());
    info.size = 0;

    if (size == 0)
    {
        generateInfo(info);
        closeList6(dataset);
        return true;
    }
    int fieldCount = 0;
    int ret = getListDims6(dataset, &fieldCount);
    if (ret < 0)
    {
        closeList6(dataset);
        return false;
    }

    //open __refs__ node
    int refs = getDataSetIdFromName(dataset, "__refs__");
    H5O_info_t oinfo;
    for (int i = 0; i < fieldCount; ++i)
    {
        H5Oget_info_by_idx(dataset, ".", H5_INDEX_NAME, H5_ITER_NATIVE, i, &oinfo, H5P_DEFAULT);
        ssize_t len = H5Lget_name_by_idx(dataset, ".", H5_INDEX_NAME, H5_ITER_INC, i, 0, 0, H5P_DEFAULT) + 1;
        char* name = (char*)MALLOC(sizeof(char) * len);
        H5Lget_name_by_idx(dataset, ".", H5_INDEX_NAME, H5_ITER_INC, i, name, len, H5P_DEFAULT);
        std::string cname(name);
        FREE(name);

        if (cname != "__dims__" && cname != "__refs__")
        {
            int dataref = getDataSetIdFromName(dataset, cname.data());
            if (dataref < 0)
            {
                closeList6(dataset);
                return false;
            }

            int refdim = 0;
            getDatasetInfo(dataref, &complex, &refdim, NULL);
            std::vector<int> refdims(refdim);
            int refcount = getDatasetInfo(dataref, &complex, &refdim, refdims.data());
            std::vector<hobj_ref_t> vrefs(refcount);
            ret = H5Dread(dataref, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, vrefs.data());
            if (ret < 0)
            {
                return false;
            }


            //import field
            for (int j = 0; j < refcount; ++j)
            {
                int data = H5Rdereference(refs, H5R_OBJECT, &vrefs[j]);
                if (data < 0)
                {
                    return false;
                }

                VarInfo6 info2;
                ret = read_data(data, info2);
                if (ret == false)
                {
                    return false;
                }

                info.size += info2.size;

            }

            closeDataSet(dataref);
        }
    }

    generateInfo(info);
    closeList6(refs);
    closeList6(dataset);
    return true;
}
Exemplo n.º 14
0
static types::InternalType* import_struct(int dataset)
{
    //get struct dims node
    int complex = 0;
    std::vector<int> pdims;
    int size = getDimsNode(dataset, &complex, pdims);

    types::Struct* str = new types::Struct(static_cast<int>(pdims.size()), pdims.data());
    size = str->getSize();
    if (size == 0)
    {
        //empty struct
        closeList6(dataset);
        delete str;
        return new types::Struct();
    }

    types::SingleStruct** sstr = str->get();

    int fieldCount = 0;
    int ret = getListDims6(dataset, &fieldCount);
    if (ret < 0)
    {
        closeList6(dataset);
        return str;
    }

    //get fields name
    int dfield = getDataSetIdFromName(dataset, "__fields__");
    int dim = 0;
    getDatasetInfo(dfield, &complex, &dim, NULL);
    std::vector<int> d(dim);
    size = getDatasetInfo(dfield, &complex, &dim, d.data());
    if (size < 0)
    {
        closeList6(dataset);
        delete str;
        return nullptr;
    }

    //get dims value
    std::vector<char*> fields(size);
    readStringMatrix(dfield, fields.data());

    //open __refs__ node
    int refs = getDataSetIdFromName(dataset, "__refs__");

    for (const auto & name : fields)
    {
        wchar_t* field = to_wide_string(name);
        str->addField(field);

        int dataref = getDataSetIdFromName(dataset, name);
        if (dataref < 0)
        {
            closeList6(dataset);
            freeStringMatrix(dfield, fields.data());
            FREE(field);
            delete str;
            return nullptr;
        }

        int refdim = 0;
        getDatasetInfo(dataref, &complex, &refdim, NULL);
        std::vector<int> refdims(refdim);
        int refcount = getDatasetInfo(dataref, &complex, &refdim, refdims.data());
        std::vector<hobj_ref_t> vrefs(refcount);
        ret = H5Dread(dataref, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, vrefs.data());
        if (ret < 0)
        {
            freeStringMatrix(dfield, fields.data());
            FREE(field);
            delete str;
            return nullptr;
        }


        //import field
        for (int j = 0; j < refcount; ++j)
        {
            int data = H5Rdereference(refs, H5R_OBJECT, &vrefs[j]);
            if (data < 0)
            {
                freeStringMatrix(dfield, fields.data());
                FREE(field);
                delete str;
                return nullptr;
            }

            types::InternalType* val = import_data(data);
            if (val == nullptr)
            {
                freeStringMatrix(dfield, fields.data());
                FREE(field);
                delete str;
                return nullptr;
            }

            sstr[j]->set(field, val);

        }

        FREE(field);
        closeDataSet(dataref);
    }

    freeStringMatrix(dfield, fields.data());
    closeList6(refs);
    closeList6(dataset);
    return str;
}
Exemplo n.º 15
0
static types::InternalType* import_macro(int dataset)
{
    int complex = 0;
    int dims = 0;
    int size = 0;
    std::vector<int> d(2);

    std::list<symbol::Variable*>* inputList = new std::list<symbol::Variable*>();
    std::list<symbol::Variable*>* outputList = new std::list<symbol::Variable*>();
    ast::Exp* body = nullptr;

    symbol::Context* ctx = symbol::Context::getInstance();

    //inputs
    int inputNode = getDataSetIdFromName(dataset, "inputs");
    size = getDatasetInfo(inputNode, &complex, &dims, d.data());
    if (size < 0)
    {
        delete inputList;
        delete outputList;
        closeList6(dataset);
        return nullptr;
    }
    std::vector<char*> inputNames(size);

    if (size != 0)
    {
        readStringMatrix(inputNode, inputNames.data());

        for (auto & input : inputNames)
        {
            wchar_t* winput = to_wide_string(input);
            symbol::Variable* var = ctx->getOrCreate(symbol::Symbol(winput));
            FREE(winput);
            inputList->push_back(var);
        }

        freeStringMatrix(inputNode, inputNames.data());
    }
    else
    {
        closeDataSet(inputNode);
    }

    //outputs
    int outputNode = getDataSetIdFromName(dataset, "outputs");
    size = getDatasetInfo(outputNode, &complex, &dims, d.data());
    if (size < 0)
    {
        delete inputList;
        delete outputList;
        closeList6(dataset);
        return nullptr;
    }
    std::vector<char*> outputNames(size);

    if (size != 0)
    {
        readStringMatrix(outputNode, outputNames.data());

        for (auto & output : outputNames)
        {
            wchar_t* woutput = to_wide_string(output);
            symbol::Variable* var = ctx->getOrCreate(symbol::Symbol(woutput));
            FREE(woutput);
            outputList->push_back(var);
        }

        freeStringMatrix(outputNode, outputNames.data());
    }
    else
    {
        closeDataSet(outputNode);
    }

    //body
    int bodyNode = getDataSetIdFromName(dataset, "body");
    size = getDatasetInfo(bodyNode, &complex, &dims, d.data());
    if (size < 0)
    {
        delete inputList;
        delete outputList;
        closeList6(dataset);
        return nullptr;
    }
    std::vector<unsigned char> bodybin(size);
    readUnsignedInteger8Matrix(bodyNode, bodybin.data());

    ast::DeserializeVisitor ds(bodybin.data());
    body = ds.deserialize();

    //wname+1 is to remove "/" at the start of the var name from HDF5
    types::Macro* macro = new types::Macro(L"", *inputList, *outputList, *body->getAs<ast::SeqExp>(), L"script");
    delete body;
    closeList6(dataset);
    return macro;
}
Exemplo n.º 16
0
static types::InternalType* import_handles(int dataset)
{
    //get sparse dimensions
    int complex = 0;
    std::vector<int> pdims;
    int size = getDimsNode(dataset, &complex, pdims);

    if (size == 0)
    {
        closeList6(dataset);
        return nullptr;
    }

    //open __refs__ node
    int refs = getDataSetIdFromName(dataset, "__refs__");
    types::GraphicHandle* handles = new types::GraphicHandle(static_cast<int>(pdims.size()), pdims.data());
    long long* h = handles->get();

    if (size == 1)
    {
        //%h_copy
        int ref = getDataSetIdFromName(refs, std::to_string(0).data());
        int val = add_current_entity(ref);
        if (val < 0)
        {
            return nullptr;
        }

        h[0] = getHandle(val);
    }
    else
    {
        for (int i = 0; i < size; ++i)
        {
            int ref = getDataSetIdFromName(refs, std::to_string(i).data());
            int val = import_handle(ref, -1);
            if (val < 0)
            {
                return nullptr;
            }

            h[i] = getHandle(val);
        }
    }
    closeList6(refs);
    closeList6(dataset);


    //update links property of legend handle
    if (Links::count())
    {
        std::list<int> legends = Links::legends();
        for (auto & i : legends)
        {
            Links::PathList paths = Links::get(i);
            update_link_path(i, paths);
        }
    }

    return handles;
}
Exemplo n.º 17
0
static types::InternalType* import_poly(int dataset)
{
    //get poly dims node
    int complex = 0;
    std::vector<int> pdims;
    int size = getDimsNode(dataset, &complex, pdims);

    //get variable name
    char* var = NULL;
    int varname = getDataSetIdFromName(dataset, "__varname__");
    readStringMatrix(varname, &var);
    wchar_t* wvar = to_wide_string(var);
    std::wstring wvarname(wvar);
    FREE(wvar);
    freeStringMatrix(varname, &var);

    types::Polynom* p = new types::Polynom(wvarname, static_cast<int>(pdims.size()), pdims.data());
    types::SinglePoly** pss = p->get();

    //open __refs__ node
    int refs = getDataSetIdFromName(dataset, "__refs__");
    size = p->getSize();

    //loop on children
    for (int i = 0; i < size; ++i)
    {
        //forge name
        std::string polyname(std::to_string(i));
        int poly = getDataSetIdFromName(refs, polyname.data());

        //get dims
        complex = 0;
        int dims = 0;
        int ret = getDatasetInfo(poly, &complex, &dims, NULL);
        if (ret < 0)
        {
            return nullptr;
        }

        std::vector<int> d(dims);
        int datasize = getDatasetInfo(poly, &complex, &dims, d.data());

        types::SinglePoly* ss = NULL;

        //get coef
        if (dims == 0 || datasize <= 0)
        {
            ss = new types::SinglePoly();
        }
        else if (complex)
        {
            double* real = NULL;
            double* img = NULL;
            //create singlepoly
            ss = new types::SinglePoly(&real, &img, datasize - 1);
            readDoubleComplexMatrix(poly, real, img);
        }
        else
        {
            double* real = NULL;
            ss = new types::SinglePoly(&real, datasize - 1);
            readDoubleMatrix(poly, real);
        }

        pss[i] = ss;
    }

    closeList6(refs);
    closeList6(dataset);
    return p;
}
Exemplo n.º 18
0
static types::InternalType* import_sparse(int dataset)
{
    types::Sparse* sp = nullptr;
    //get sparse dimensions
    int complex = 0;
    std::vector<int> pdims;
    int size = getDimsNode(dataset, &complex, pdims);

    //get non zeros count
    int nnz = 0;
    int datannz = getDataSetIdFromName(dataset, "__nnz__");
    readInteger32Matrix(datannz, &nnz);

    if (nnz == 0)
    {
        closeList6(dataset);
        return new types::Sparse(pdims[0], pdims[1]);
    }

    //get inner vector
    int datain = getDataSetIdFromName(dataset, "__inner__");
    int dimin = 0;
    int sizein = getDatasetInfo(datain, &complex, &dimin, NULL);
    std::vector<int> dimsin(dimin);
    sizein = getDatasetInfo(datain, &complex, &dimin, dimsin.data());
    if (sizein < 0)
    {
        closeList6(dataset);
        return nullptr;
    }

    std::vector<int> in(sizein);
    int ret = readInteger32Matrix(datain, in.data());
    if (ret < 0)
    {
        closeList6(dataset);
        return nullptr;
    }

    //get outer vector
    int dataout = getDataSetIdFromName(dataset, "__outer__");
    int dimout = 0;
    int sizeout = getDatasetInfo(dataout, &complex, &dimout, NULL);
    std::vector<int> dimsout(dimout);
    sizeout = getDatasetInfo(dataout, &complex, &dimout, dimsout.data());
    if (sizeout < 0)
    {
        closeList6(dataset);
        return nullptr;
    }

    std::vector<int> out(sizeout);
    ret = readInteger32Matrix(dataout, out.data());
    if (ret < 0)
    {
        closeList6(dataset);
        return nullptr;
    }

    //get data
    int ddata = getDataSetIdFromName(dataset, "__data__");
    int dimdata = 0;
    int sizedata = getDatasetInfo(ddata, &complex, &dimdata, NULL);
    std::vector<int> dimsdata(dimdata);
    sizedata = getDatasetInfo(ddata, &complex, &dimdata, dimsdata.data());
    if (sizedata < 0)
    {
        closeList6(dataset);
        return nullptr;
    }

    std::vector<double> real(sizedata);

    if (complex)
    {
        std::vector<double> img(sizedata);
        ret = readDoubleComplexMatrix(ddata, real.data(), img.data());
        if (ret < 0)
        {
            closeList6(dataset);
            return nullptr;
        }

        sp = new types::Sparse(pdims[0], pdims[1], nnz, in.data(), out.data(), real.data(), img.data());
    }
    else
    {
        ret = readDoubleMatrix(ddata, real.data());
        if (ret < 0)
        {
            closeList6(dataset);
            return nullptr;
        }

        sp = new types::Sparse(pdims[0], pdims[1], nnz, in.data(), out.data(), real.data(), nullptr);
    }

    closeList6(dataset);
    return sp;
}