// Validate that the edge members are sane
void Edge::validate() const
{
const Edge* pTwin = getTwin();
std::string m_v1 = getMatchStr();
std::string m_v2 = pTwin->getMatchStr();
if(getComp() == EC_REVERSE)
m_v2 = reverseComplement(m_v2);
bool error = false;
if(m_v1.length() != m_v2.length())
{
std::cerr << "Error, matching strings are not the same length\n";
error = true;
}
if(error)
{
std::cerr << "V1M: " << m_v1 << "\n";
std::cerr << "V2M: " << m_v2 << "\n";
std::cerr << "V1MC: " << getMatchCoord() << "\n";
std::cerr << "V2MC: " << pTwin->getMatchCoord() << "\n";
std::cerr << "V1: " << getStart()->getSeq() << "\n";
std::cerr << "Validation failed for edge " << *this << "\n";
assert(false);
}
}
char Edge::isReal() const
{
Edge *opp = getTwin();
if(!opp) return 1;
Facet *f0 = (Facet *)getFace();
Facet *f1 = (Facet *)opp->getFace();
return f0->getPolygonIndex() != f1->getPolygonIndex();
}
// Get the edge's label
std::string Edge::getLabel() const
{
const Edge* pTwin = getTwin();
const Vertex* pEndpoint = m_pEnd;
// get the unmatched coordinates in V2
SeqCoord unmatched = pTwin->getMatchCoord().complement();
std::string seq = unmatched.getSubstring(pEndpoint->getStr());
if(getComp() == EC_REVERSE)
seq = reverseComplement(seq);
return seq;
}
void QBlockDiagramLinkEnd::paint( QPainter * painter, const QStyleOptionGraphicsItem * option, QWidget * widget /*= 0 */ )
{
painter->setPen(m_pOwnerLink->m_Pens[m_pOwnerLink->dominantPenState()]);
painter->setBrush(m_pOwnerLink->m_Brushes[m_pOwnerLink->dominantBrushState()]);
painter->drawEllipse(boundingRect());
if(getConnectedSlot() && !isMoving() && !getTwin()->isMoving())
{
if(getConnectedSlot()->getConnectionCount() > 1 && !getConnectedSlot()->areConnectionNodesExpanded())
{
QFont f = painter->font();
f.setPointSize(7);
f.setWeight(99);
painter->setFont(f);
painter->drawText(boundingRect(), Qt::AlignCenter, QString::number(getConnectedSlot()->getConnectionCount()));
}
}
}
