Exemplos de gth_backtrace_path_alphatype em C++ (Cpp)

Exemplo n.º 1

Arquivo: path_walker.c Projeto: 9beckert/TIR

GthPathWalker* gth_path_walker_new(const GthBacktracePath *bp, bool forward)
{
  GthPathWalker *pw;
  gt_assert(bp);
  gt_assert(forward); /* XXX: implement reverse walking */
  pw = gt_calloc(1, sizeof *pw);
  pw->forward = forward;
  pw->proteineop = gth_backtrace_path_alphatype(bp) == PROTEIN_ALPHA;
  pw->alignment = gth_backtrace_path_get(bp);
  pw->alignmentlength = gth_backtrace_path_length(bp);
  pw->eopptr = pw->alignment + pw->alignmentlength - 1;
  pw->last_eop_type = NUM_OF_EOP_TYPES;
  return pw;
}

Exemplo n.º 2

Arquivo: sa.c Projeto: AnnSeidel/genometools

GthAlphatype gth_sa_alphatype(const GthSA *sa)
{
  gt_assert(sa);
  return gth_backtrace_path_alphatype(sa->backtrace_path);
}