MainWindow::MainWindow(QWidget *parent) :
QMainWindow(parent)
{
m_log = new Log(this);
m_pragmaDialog = new PragmaDialog(this);
m_memoryDialog = new MemoryDialog(this);
m_dbWidget = new DatabaseWidget();
connect(m_dbWidget, SIGNAL(logMsg(QString)), m_log, SLOT(addMsg(QString)));
connect(m_dbWidget, SIGNAL(active(QSharedPointer<SQLite>)), m_pragmaDialog, SLOT(active(QSharedPointer<SQLite>)));
connect(m_dbWidget, SIGNAL(inactive()), m_pragmaDialog, SLOT(inactive()));
connect(m_dbWidget, SIGNAL(active(QSharedPointer<SQLite>)), m_memoryDialog, SLOT(active(QSharedPointer<SQLite>)));
connect(m_dbWidget, SIGNAL(inactive()), m_memoryDialog, SLOT(inactive()));
setCentralWidget(m_dbWidget);
createActions();
createMenus();
createToolBars();
statusBar();
QSettings settings("Research In Motion", "sbuilder");
restoreGeometry(settings.value("geometry").toByteArray());
m_recentFiles = settings.value("recentFiles").toStringList();
updateRecentFileActions();
sqlite3_initialize();
}
void ChatSession::slotReconnect() {
delete mng;
m_chatpage->users_box->clear();
emit inactive();
createTelnetManager();
emit active();
}
void make_progressbar(float value, video::IImage *image)
{
if(image == NULL)
return;
core::dimension2d<u32> size = image->getDimension();
u32 barheight = size.Height/16;
u32 barpad_x = size.Width/16;
u32 barpad_y = size.Height/16;
u32 barwidth = size.Width - barpad_x*2;
v2u32 barpos(barpad_x, size.Height - barheight - barpad_y);
u32 barvalue_i = (u32)(((float)barwidth * value) + 0.5);
video::SColor active(255,255,0,0);
video::SColor inactive(255,0,0,0);
for(u32 x0=0; x0<barwidth; x0++)
{
video::SColor *c;
if(x0 < barvalue_i)
c = &active;
else
c = &inactive;
u32 x = x0 + barpos.X;
for(u32 y=barpos.Y; y<barpos.Y+barheight; y++)
{
image->setPixel(x,y, *c);
}
}
}
//Checks if this chain is currently providing angles so that external
//classes can check the status of this one
void ScriptedProvider::setActive(){
if(isDone())
{
inactive();
}
else
active();
}
double stex::Reac::rate(void) const
{
if (inactive()) return 0.0;
// Prefetch some variables.
ssolver::Compdef * cdef = pTet->compdef();
uint nspecs = cdef->countSpecs();
uint * lhs_vec = cdef->reac_lhs_bgn(cdef->reacG2L(pReacdef->gidx()));
uint * cnt_vec = pTet->pools();
// Compute combinatorial part.
double h_mu = 1.0;
for (uint pool = 0; pool < nspecs; ++pool)
{
uint lhs = lhs_vec[pool];
if (lhs == 0) continue;
uint cnt = cnt_vec[pool];
if (lhs > cnt)
{
h_mu = 0.0;
break;
}
switch (lhs)
{
case 4:
{
h_mu *= static_cast<double>(cnt - 3);
}
case 3:
{
h_mu *= static_cast<double>(cnt - 2);
}
case 2:
{
h_mu *= static_cast<double>(cnt - 1);
}
case 1:
{
h_mu *= static_cast<double>(cnt);
break;
}
default:
{
assert(0);
return 0.0;
}
}
}
// Multiply with scaled reaction constant.
return h_mu * pCcst;
}
inline void set_force_inactive()
{
utils::byte active(THREAD_ACTIVE);
utils::byte inactive(THREAD_INACTIVE);
while(true) {
utils::byte old_val(tstate);
if(old_val == inactive)
return;
else if(old_val == active) {
if(cmpxchg(&tstate, old_val, inactive) == old_val) {
term_barrier->is_inactive();
return;
}
} else if(old_val == (active | THREAD_NEW_WORK)) {
if(cmpxchg(&tstate, old_val, inactive) == old_val)
return;
}
cpu_relax();
}
}
inline bool set_inactive_if_no_work()
{
utils::byte active(THREAD_ACTIVE);
utils::byte inactive(THREAD_INACTIVE);
// return true if there is new work
while(true) {
utils::byte old_val(tstate);
if(old_val == inactive)
return false;
else if(old_val == THREAD_ACTIVE) {
if(cmpxchg(&tstate, old_val, inactive) == old_val) {
term_barrier->is_inactive();
return false;
}
} else if(old_val == (THREAD_ACTIVE | THREAD_NEW_WORK)) {
if(cmpxchg(&tstate, old_val, active) == old_val)
return true;
}
cpu_relax();
}
}
// add training images for a person
void addTrainingImagesCb(const sensor_msgs::ImageConstPtr& msg) {
// cout << "addTrainingImagesCb" << endl;
if (_as.isPreemptRequested() || !ros::ok()) {
// std::cout << "preempt req or not ok" << std::endl;
ROS_INFO("%s: Preempted", _action_name.c_str());
// set the action state to preempted
_as.setPreempted();
// success = false;
// break;
// cout << "shutting down _image_sub" << endl;
_image_sub.shutdown();
return;
}
if (!_as.isActive()) {
// std::cout << "not active" << std::endl;
// cout << "shutting down _image_sub" << endl;
_image_sub.shutdown();
return;
}
cv_bridge::CvImagePtr cv_ptr;
try
{
cv_ptr = cv_bridge::toCvCopy(msg, sensor_msgs::image_encodings::BGR8);
}
catch (cv_bridge::Exception& e)
{
ROS_ERROR("%s: cv_bridge exception: %s", _action_name.c_str(), e.what());
return;
}
if (_window_rows == 0) {
_window_rows = cv_ptr->image.rows;
_window_cols = cv_ptr->image.cols;
}
std::vector<cv::Rect> faces;
// _fd.detectFaces(cv_ptr->image, faces, true);
std::vector<cv::Mat> faceImgs = _fd.getFaceImgs(cv_ptr->image, faces, true);
if (faceImgs.size() > 0)
_fc->capture(faceImgs[0]);
// call images capturing function
_result.names.push_back(_goal_argument);
// _result.confidence.push_back(2.0);
int no_images_to_click;
_ph.getParam("no_training_images", no_images_to_click);
if (_fc->getNoImgsClicked() >= no_images_to_click) {
// Mat inactive = cv::Mat::zeros(cv_ptr->image.rows, cv_ptr->image.cols, CV_32F);
Mat inactive(_window_rows, _window_cols, CV_8UC3, CV_RGB(20,20,20));
appendStatusBar(inactive, "INACTIVE", "Images added. Please train.");
cv::imshow(_windowName, inactive);
// cv::displayOverlay(_windowName, "Images added", 3000);
_as.setSucceeded(_result);
} else {
// update GUI window
// check GUI parameter
appendStatusBar(cv_ptr->image, "ADDING IMAGES.", "Images added");
cv::imshow(_windowName, cv_ptr->image);
}
cv::waitKey(3);
}
// run face recognition on the recieved image
void recognizeCb(const sensor_msgs::ImageConstPtr& msg) {
// cout << "entering.. recognizeCb" << endl;
_ph.getParam("algorithm", _recognitionAlgo);
if (_as.isPreemptRequested() || !ros::ok()) {
// std::cout << "preempt req or not ok" << std::endl;
ROS_INFO("%s: Preempted", _action_name.c_str());
// set the action state to preempted
_as.setPreempted();
// success = false;
// break;
// cout << "shutting down _image_sub" << endl;
_image_sub.shutdown();
Mat inactive(_window_rows, _window_cols, CV_8UC3, CV_RGB(20,20,20));
appendStatusBar(inactive, "INACTIVE", "");
cv::imshow(_windowName, inactive);
cv::waitKey(3);
return;
}
if (!_as.isActive()) {
// std::cout << "not active" << std::endl;
// cout << "shutting down _image_sub" << endl;
_image_sub.shutdown();
Mat inactive(_window_rows, _window_cols, CV_8UC3, CV_RGB(20,20,20));
appendStatusBar(inactive, "INACTIVE", "");
cv::imshow(_windowName, inactive);
cv::waitKey(3);
return;
}
cv_bridge::CvImagePtr cv_ptr;
try
{
cv_ptr = cv_bridge::toCvCopy(msg, sensor_msgs::image_encodings::BGR8);
}
catch (cv_bridge::Exception& e)
{
ROS_ERROR("%s: cv_bridge exception: %s", _action_name.c_str(), e.what());
return;
}
if (_window_rows == 0) {
_window_rows = cv_ptr->image.rows;
_window_cols = cv_ptr->image.cols;
}
// clear previous feedback
_feedback.names.clear();
_feedback.confidence.clear();
// _result.names.clear();
// _result.confidence.clear();
std::vector<cv::Rect> faces;
std::vector<cv::Mat> faceImgs = _fd.getFaceImgs(cv_ptr->image, faces, true);
std::map<string, std::pair<string, double> > results;
for( size_t i = 0; i < faceImgs.size(); i++ ) {
cv::resize(faceImgs[i], faceImgs[i], cv::Size(100.0, 100.0));
cv::cvtColor( faceImgs[i], faceImgs[i], CV_BGR2GRAY );
cv::equalizeHist( faceImgs[i], faceImgs[i] );
// perform recognition
results = _fr->recognize(faceImgs[i],
("eigenfaces" == _recognitionAlgo),
("fisherfaces" == _recognitionAlgo),
("lbph" == _recognitionAlgo)
);
ROS_INFO("Face %lu:", i);
if ("eigenfaces" == _recognitionAlgo)
ROS_INFO("\tEigenfaces: %s %f", results["eigenfaces"].first.c_str(), results["eigenfaces"].second);
if ("fisherfaces" == _recognitionAlgo)
ROS_INFO("\tFisherfaces: %s %f", results["fisherfaces"].first.c_str(), results["fisherfaces"].second);
if ("lbph" == _recognitionAlgo)
ROS_INFO("\tLBPH: %s %f", results["lbph"].first.c_str(), results["lbph"].second);
}
// update GUI window
// TODO check gui parameter
appendStatusBar(cv_ptr->image, "RECOGNITION", "");
cv::imshow(_windowName, cv_ptr->image);
cv::waitKey(3);
// if faces were detected
if (faceImgs.size() > 0) {
// recognize only once
if (_goal_id == 0) {
// std::cout << "goal_id 0. setting succeeded." << std::endl;
// cout << _recognitionAlgo << endl;
_result.names.push_back(results[_recognitionAlgo].first);
_result.confidence.push_back(results[_recognitionAlgo].second);
_as.setSucceeded(_result);
}
// recognize continuously
else {
_feedback.names.push_back(results[_recognitionAlgo].first);
_feedback.confidence.push_back(results[_recognitionAlgo].second);
_as.publishFeedback(_feedback);
}
}
}
u1_t handler_dev_arm_read(u2_t addr)
{
u1_t data, key;
assert (addr == RREG_LDACSR || addr == RREG_A16_SWITCHES || addr == RREG_I1 || addr == RREG_ST ||
addr == RREG_N0ST || addr == RREG_N0H || addr == RREG_N0L || addr == RREG_N1N2H || addr == RREG_N1N2L ||
addr == RREG_N3H || addr == RREG_N3L);
// derive N0ST values from PRU collection of overflow data
if (use_pru && hold_off && (addr == RREG_N0ST)) {
bool sent=FALSE, done_before=FALSE;
if (pru->count == PRU_DONE) done_before=TRUE;
if ((pru->n3_ovfl - n3_ovfl_sent) > 0) {
n3_ovfl_sent++;
sent=TRUE;
data = inactive(N0ST_EOM) | active(N0ST_N3_OVFL) | inactive(N0ST_N0_OVFL);
} else
if ((pru->n0_ovfl - n0_ovfl_sent) > 0) {
n0_ovfl_sent++;
sent=TRUE;
data = inactive(N0ST_EOM) | inactive(N0ST_N3_OVFL) | active(N0ST_N0_OVFL);
} else {
ovfl_none++;
data = inactive(N0ST_EOM) | inactive(N0ST_N3_OVFL) | inactive(N0ST_N0_OVFL);
}
// PRU saw EOM: be careful about the race condition when looking at the counters
if (!sent && done_before && (pru->count == PRU_DONE)) {
freq_record(0, REG_STR, 0, 0, 0, "H");
hold_off = FALSE;
}
return data;
}
data = bus_read(addr);
#ifdef FREQ_DEBUG
if (use_pru && !hold_off) {
if (addr == RREG_N0ST && (isActive(N0ST_EOM, data) || isActive(N0ST_N3_OVFL, data) || isActive(N0ST_N0_OVFL, data))) {
freq_record(0, REG_READ, addr, data, 0, 0);
}
}
#endif
//#define SELF_TEST
#ifdef SELF_TEST
if (addr == RREG_A16_SWITCHES) data = 0; // force self-test mode (simulate all switches down)
#endif
// The interrupt from pressing the LCL/RMT key causes the RREG_I1 to be read.
// Check for a regular key being simultaneously pressed and then when the
// register is accessed outside of the interrupt routine use the "sim key"
// mechanism to process the "shifted" key press.
if (addr == RREG_I1) {
if (!(data & I1_IRQ)) {
if (!(data & I1_LRTL)) {
key = bus_read(RREG_KEY_SCAN);
if ((key & KEY_IDLE2) != KEY_IDLE2) {
shifted_key = key;
}
}
} else {
if (shifted_key) {
sim_key = shifted_key;
shifted_key = 0;
sim_key_intr = 1;
}
}
}
DUMP_AREG(N0ST, addr, data);
DUMP_AREG(N1N2H, addr, data);
DUMP_AREG(N1N2L, addr, data);
DUMP_AREG(N0H, addr, data);
DUMP_AREG(N0L, addr, data);
#ifdef DEBUG
if (trace_regs) {
if (addr == RREG_N0ST) {
if (isActive(N0ST_EOM, data)) printf("EOM");
if (isActive(N0ST_N3_OVFL, data)) printf("3");
if (isActive(N0ST_N0_OVFL, data)) printf("0");
}
if (addr == RREG_I1 && data == 0x7f) printf("_"); else
if (addr == RREG_ST) { ; } else
if (addr == RREG_A16_SWITCHES) ; else
printf("%s=%02x ", arm_rreg[addr - ADDR_ARM(0)], data);
}
#endif
return data;
}
double swmd::SReac::rate(void) const
{
if (inactive()) return 0.0;
// First we compute the combinatorial part.
// 1/ for the surface part of the stoichiometry
// 2/ for the inner or outer volume part of the stoichiometry, pool
// depending on whether the sreac is inner() or outer()
// Then we multiply with mesoscopic constant.
ssolver::Patchdef * pdef = pPatch->def();
uint lidx = pdef->sreacG2L(defsr()->gidx());
double h_mu = 1.0;
uint * lhs_s_vec = pdef->sreac_lhs_S_bgn(lidx);
double * cnt_s_vec = pdef->pools();
uint nspecs_s = pdef->countSpecs();
for (uint s = 0; s < nspecs_s; ++s)
{
uint lhs = lhs_s_vec[s];
if (lhs == 0) continue;
uint cnt = static_cast<uint>(cnt_s_vec[s]);
if (lhs > cnt)
{
return 0.0;
}
switch (lhs)
{
case 4:
{
h_mu *= static_cast<double>(cnt - 3);
}
case 3:
{
h_mu *= static_cast<double>(cnt - 2);
}
case 2:
{
h_mu *= static_cast<double>(cnt - 1);
}
case 1:
{
h_mu *= static_cast<double>(cnt);
break;
}
default:
{
assert(0);
return 0.0;
}
}
}
if (defsr()->inside())
{
uint * lhs_i_vec = pdef->sreac_lhs_I_bgn(lidx);
double * cnt_i_vec = pPatch->iComp()->def()->pools();
uint nspecs_i = pdef->countSpecs_I();
for (uint s = 0; s < nspecs_i; ++s)
{
uint lhs = lhs_i_vec[s];
if (lhs == 0) continue;
uint cnt = static_cast<double>(cnt_i_vec[s]);
if (lhs > cnt)
{
return 0.0;
}
switch (lhs)
{
case 4:
{
h_mu *= static_cast<double>(cnt - 3);
}
case 3:
{
h_mu *= static_cast<double>(cnt - 2);
}
case 2:
{
h_mu *= static_cast<double>(cnt - 1);
}
case 1:
{
h_mu *= static_cast<double>(cnt);
break;
}
default:
{
assert(0);
return 0.0;
}
}
}
}
else if (defsr()->outside())
{
uint * lhs_o_vec = pdef->sreac_lhs_O_bgn(lidx);
double * cnt_o_vec = pPatch->oComp()->def()->pools();
uint nspecs_o = pdef->countSpecs_O();
for (uint s = 0; s < nspecs_o; ++s)
{
uint lhs = lhs_o_vec[s];
if (lhs == 0) continue;
uint cnt = static_cast<double>(cnt_o_vec[s]);
if (lhs > cnt)
{
return 0.0;
}
switch (lhs)
{
case 4:
{
h_mu *= static_cast<double>(cnt - 3);
}
case 3:
{
h_mu *= static_cast<double>(cnt - 2);
}
case 2:
{
h_mu *= static_cast<double>(cnt - 1);
}
case 1:
{
h_mu *= static_cast<double>(cnt);
break;
}
default:
{
assert(0);
return 0.0;
}
}
}
}
return h_mu * pCcst;
}
void HistogramOnGrid::calculate( const unsigned& current, MultiValue& myvals, std::vector<double>& buffer, std::vector<unsigned>& der_list ) const {
if( addOneKernelAtATime ) {
plumed_dbg_assert( myvals.getNumberOfValues()==2 && !wasforced );
std::vector<double> der( dimension );
for(unsigned i=0; i<dimension; ++i) der[i]=myvals.getDerivative( 1, i );
accumulate( getAction()->getPositionInCurrentTaskList(current), myvals.get(0), myvals.get(1), der, buffer );
} else {
plumed_dbg_assert( myvals.getNumberOfValues()==dimension+2 );
std::vector<double> point( dimension );
double weight=myvals.get(0)*myvals.get( 1+dimension );
for(unsigned i=0; i<dimension; ++i) point[i]=myvals.get( 1+i );
// Get the kernel
unsigned num_neigh;
std::vector<unsigned> neighbors;
std::vector<double> der( dimension );
KernelFunctions* kernel=getKernelAndNeighbors( point, num_neigh, neighbors );
// If no kernel normalize the vector so von misses distribution is calculated correctly
if( !kernel ) {
double norm=0;
for(unsigned j=0; j<dimension; ++j) norm += point[j]*point[j];
norm=sqrt( norm );
for(unsigned j=0; j<dimension; ++j) point[j] = point[j] / norm;
}
if( !kernel && getType()=="flat" ) {
plumed_dbg_assert( num_neigh==1 );
accumulate( neighbors[0], weight, 1.0, der, buffer );
} else {
double totwforce=0.0;
std::vector<double> intforce( 2*dimension, 0.0 );
std::vector<Value*> vv( getVectorOfValues() );
double newval;
std::vector<double> xx( dimension );
for(unsigned i=0; i<num_neigh; ++i) {
unsigned ineigh=neighbors[i];
if( inactive( ineigh ) ) continue ;
getGridPointCoordinates( ineigh, xx );
for(unsigned j=0; j<dimension; ++j) vv[j]->set(xx[j]);
if( kernel ) {
newval = kernel->evaluate( vv, der, true );
} else {
// Evalulate dot product
double dot=0;
for(unsigned j=0; j<dimension; ++j) {
dot+=xx[j]*point[j];
der[j]=xx[j];
}
// Von misses distribution for concentration parameter
newval = von_misses_norm*exp( von_misses_concentration*dot );
// And final derivatives
for(unsigned j=0; j<dimension; ++j) der[j] *= von_misses_concentration*newval;
}
accumulate( ineigh, weight, newval, der, buffer );
if( wasForced() ) {
accumulateForce( ineigh, weight, der, intforce );
totwforce += myvals.get( 1+dimension )*newval*forces[ineigh];
}
}
if( wasForced() ) {
unsigned nder = getAction()->getNumberOfDerivatives();
unsigned gridbuf = getNumberOfBufferPoints()*getNumberOfQuantities();
for(unsigned j=0; j<dimension; ++j) {
for(unsigned k=0; k<myvals.getNumberActive(); ++k) {
// Minus sign here as we are taking derivative with respect to position of center of kernel NOT derivative wrt to
// grid point
unsigned kder=myvals.getActiveIndex(k);
buffer[ bufstart + gridbuf + kder ] -= intforce[j]*myvals.getDerivative( j+1, kder );
}
}
// Accumulate the sum of all the weights
buffer[ bufstart + gridbuf + nder ] += myvals.get(0);
// Add the derivatives of the weights into the force -- this is separate loop as weights of all parts are considered together
for(unsigned k=0; k<myvals.getNumberActive(); ++k) {
unsigned kder=myvals.getActiveIndex(k);
buffer[ bufstart + gridbuf + kder ] += totwforce*myvals.getDerivative( 0, kder );
buffer[ bufstart + gridbuf + nder + 1 + kder ] += myvals.getDerivative( 0, kder );
}
}
delete kernel;
for(unsigned i=0; i<dimension; ++i) delete vv[i];
}
}
}
void HeadProvider::setActive()
{
isDone() ? inactive() : active();
}