void mafsInRegion(char *regionFile, char *out, int mafCount, char *mafFiles[])
/* Extract MAFs in regions listed in regin file */
{
int i = 0;
struct hash *bedHash = NULL;
FILE *f = NULL;
struct mafFile *mf = NULL;
verbose(1, "Extracting from %d files to %s\n", mafCount, out);
bedHash = loadRegions(regionFile);
/* get scoring scheme */
mf = mafOpen(mafFiles[0]);
if (!mf)
errAbort("can't open MAF file: %s\n", mafFiles[0]);
scoring = cloneString(mf->scoring);
mafFileFree(&mf);
/* set up output dir */
if (outDir)
{
dir = out;
makeDir(dir);
}
else
f = startOutFile(out);
for (i = 0; i < mafCount; i++)
extractMafs(mafFiles[i], f, bedHash);
if (!outDir)
endOutFile(f);
}
void QgsGrassNewMapset::pageSelected( int index )
{
QgsDebugMsg( QString( "title = %1" ).arg( page( index ) ? page( index )->title() : "(null)" ) );
switch ( index )
{
case LOCATION:
if ( mPreviousPage == DATABASE )
{
setLocationPage();
}
break;
case CRS:
// Projection selector
if ( !mProjectionSelector )
{
QGridLayout *projectionLayout = new QGridLayout( mProjectionFrame );
mProjectionSelector = new QgsProjectionSelector( mProjectionFrame, "Projection", 0 );
mProjectionSelector->setEnabled( false );
projectionLayout->addWidget( mProjectionSelector, 0 , 0 );
mProjectionSelector->show();
connect( mProjectionSelector, SIGNAL( sridSelected( QString ) ),
this, SLOT( sridSelected( QString ) ) );
// Se current QGIS projection
int srsid = QgsProject::instance()->readNumEntry(
"SpatialRefSys", "/ProjectCRSID", 0 );
QgsCoordinateReferenceSystem srs( srsid, QgsCoordinateReferenceSystem::InternalCrsId );
QgsDebugMsg( QString( "current project srsid = %1" ).arg( srsid ) );
QgsDebugMsg( QString( "srs.isValid() = %1" ).arg( srs.isValid() ) );
if ( srs.isValid() )
{
mProjectionSelector->setSelectedCrsId( srsid );
mProjRadioButton->setChecked( true );
projRadioSwitched();
}
}
if ( mPreviousPage == LOCATION )
{
setProjectionPage();
}
break;
case REGION:
if ( !mRegionsInited )
{
loadRegions();
mRegionsInited = true;
}
if ( mPreviousPage == CRS )
{
setRegionPage();
}
break;
case MAPSET:
if ( mPreviousPage == LOCATION || mPreviousPage == REGION )
{
setMapsets();
mapsetChanged();
}
break;
case FINISH:
setFinishPage();
break;
}
mPreviousPage = index;
}
bool loadGame(const Common::String &fname) {
Common::InSaveFile *fp = g_system->getSavefileManager()->openForLoading(fname);
FILETIME savedGameTime;
while (allRunningFunctions)
finishFunction(allRunningFunctions);
if (fp == NULL)
return false;
bool headerBad = false;
if (fp->readByte() != 'S')
headerBad = true;
if (fp->readByte() != 'L')
headerBad = true;
if (fp->readByte() != 'U')
headerBad = true;
if (fp->readByte() != 'D')
headerBad = true;
if (fp->readByte() != 'S')
headerBad = true;
if (fp->readByte() != 'A')
headerBad = true;
if (headerBad) {
fatal(ERROR_GAME_LOAD_NO, fname);
return NULL;
}
char c;
c = fp->readByte();
while ((c = fp->readByte()))
;
int majVersion = fp->readByte();
int minVersion = fp->readByte();
ssgVersion = VERSION(majVersion, minVersion);
if (ssgVersion >= VERSION(1, 4)) {
if (!g_sludge->_gfxMan->skipThumbnail(fp))
return fatal(ERROR_GAME_LOAD_CORRUPT, fname);
}
uint32 bytes_read = fp->read(&savedGameTime, sizeof(FILETIME));
if (bytes_read != sizeof(FILETIME) && fp->err()) {
warning("Reading error in loadGame.");
}
if (savedGameTime.dwLowDateTime != fileTime.dwLowDateTime || savedGameTime.dwHighDateTime != fileTime.dwHighDateTime) {
return fatal(ERROR_GAME_LOAD_WRONG, fname);
}
// DON'T ADD ANYTHING NEW BEFORE THIS POINT!
if (ssgVersion >= VERSION(1, 4)) {
allowAnyFilename = fp->readByte();
}
captureAllKeys = fp->readByte();
fp->readByte(); // updateDisplay (part of movie playing)
g_sludge->_txtMan->loadFont(ssgVersion, fp);
killAllPeople();
killAllRegions();
int camerX = fp->readUint16BE();
int camerY = fp->readUint16BE();
float camerZ;
if (ssgVersion >= VERSION(2, 0)) {
camerZ = fp->readFloatLE();
} else {
camerZ = 1.0;
}
brightnessLevel = fp->readByte();
g_sludge->_gfxMan->loadHSI(fp, 0, 0, true);
g_sludge->_evtMan->loadHandlers(fp);
loadRegions(fp);
if (!g_sludge->_cursorMan->loadCursor(fp)) {
return false;
}
LoadedFunction *rFunc;
LoadedFunction **buildList = &allRunningFunctions;
int countFunctions = fp->readUint16BE();
while (countFunctions--) {
rFunc = loadFunction(fp);
rFunc->next = NULL;
(*buildList) = rFunc;
buildList = &(rFunc->next);
}
for (int a = 0; a < numGlobals; a++) {
unlinkVar(globalVars[a]);
loadVariable(&globalVars[a], fp);
}
loadPeople(fp);
if (fp->readByte()) {
if (!setFloor(fp->readUint16BE()))
return false;
} else
setFloorNull();
if (!g_sludge->_gfxMan->loadZBuffer(fp))
return false;
if (!g_sludge->_gfxMan->loadLightMap(ssgVersion, fp)) {
return false;
}
fadeMode = fp->readByte();
g_sludge->_speechMan->load(fp);
loadStatusBars(fp);
g_sludge->_soundMan->loadSounds(fp);
saveEncoding = fp->readUint16BE();
if (ssgVersion >= VERSION(1, 6)) {
if (ssgVersion < VERSION(2, 0)) {
// aaLoad
fp->readByte();
fp->readFloatLE();
fp->readFloatLE();
}
blur_loadSettings(fp);
}
if (ssgVersion >= VERSION(1, 3)) {
g_sludge->_gfxMan->loadColors(fp);
// Read parallax layers
while (fp->readByte()) {
int im = fp->readUint16BE();
int fx = fp->readUint16BE();
int fy = fp->readUint16BE();
if (!g_sludge->_gfxMan->loadParallax(im, fx, fy))
return false;
}
g_sludge->_languageMan->loadLanguageSetting(fp);
}
g_sludge->_gfxMan->nosnapshot();
if (ssgVersion >= VERSION(1, 4)) {
if (fp->readByte()) {
if (!g_sludge->_gfxMan->restoreSnapshot(fp))
return false;
}
}
delete fp;
g_sludge->_gfxMan->setCamera(camerX, camerY, camerZ);
clearStackLib();
return true;
}