void HSolveActive::setup( Id seed, double dt )
{
//~ cout << ".. HA.setup()" << endl;
this->HSolvePassive::setup( seed, dt );
readHHChannels();
readGates();
readCalcium();
createLookupTables();
readSynapses(); // Reads SynChans, SpikeGens. Drops process msg for SpikeGens.
readExternalChannels();
manageOutgoingMessages(); // Manages messages going out from the cell's components.
//~ reinit();
cleanup();
//~ cout << "# of compartments: " << compartmentId_.size() << "." << endl;
//~ cout << "# of channels: " << channelId_.size() << "." << endl;
//~ cout << "# of gates: " << gateId_.size() << "." << endl;
//~ cout << "# of states: " << state_.size() << "." << endl;
//~ cout << "# of Ca pools: " << caConc_.size() << "." << endl;
//~ cout << "# of SynChans: " << synchan_.size() << "." << endl;
//~ cout << "# of SpikeGens: " << spikegen_.size() << "." << endl;
}
void setupNeighbourshipFromFile(std::string path)
{
FILE * pFile = fopen (path.c_str(), "r");
if (pFile == NULL)
perror ("Error opening file");
else
{
std::cout << "Start to read gates.csv\n";
ignoreFirstLine(pFile);
while(true)
{
if(feof(pFile)) break;
readGates(pFile);
}
std::cout << "gates.csv has been read in.\n";
fclose(pFile);
}
}
