runWidget::runWidget(Protocol* proto, QDir working_dir, QWidget* parent) {
this->parent = parent;
this->proto = proto;
this->working_dir = working_dir;
QGridLayout* run_button_container_layout = new QGridLayout();
run_button = new QPushButton("Run Simulations");
pdialog = new QProgressBar();
note_box = new QTextEdit;
note_box->setAcceptRichText(false);
note_box_name = new QLineEdit("notes");
run_button_container_layout->addWidget(new QLabel("Notes on the simulation will be stored in the simulation folder upon running the simulation"), 0,0,1,2);
run_button_container_layout->addWidget(new QLabel("Filename"), 1,0,1,1);
run_button_container_layout->addWidget(note_box_name, 1,1,1,1);
run_button_container_layout->addWidget(note_box,2,0,1,2);
run_button_container_layout->addWidget(run_button, 3,0,1,2);
run_button_container_layout->addWidget(new QLabel("Progress"), 4,0);
run_button_container_layout->addWidget(pdialog, 4,1);
this->setLayout(run_button_container_layout);
connect(&watcher,SIGNAL(finished()),this,SLOT(finish()));
connect(&watcher,SIGNAL(finished()),pdialog,SLOT(reset()));
connect(&watcher,SIGNAL(progressRangeChanged(int,int)),pdialog,SLOT(setRange(int,int)));
connect(&watcher,SIGNAL(progressValueChanged(int)),pdialog,SLOT(setValue(int)));
connect(run_button, SIGNAL(clicked()),this,SLOT(run_sims()));
}
int main (int argc, char **argv)
{
if (argc >= 2 && !strcmp(argv[1], "sims"))
run_sims ();
else
compute_strategy ();
return 0;
}