void PairAlign::connectSignals() {
connect(showHideSequenceWidget, SIGNAL(si_subgroupStateChanged(QString)), SLOT(sl_subwidgetStateChanged(QString)));
connect(showHideSettingsWidget, SIGNAL(si_subgroupStateChanged(QString)), SLOT(sl_subwidgetStateChanged(QString)));
connect(showHideOutputWidget, SIGNAL(si_subgroupStateChanged(QString)), SLOT(sl_subwidgetStateChanged(QString)));
connect(algorithmListComboBox, SIGNAL(currentIndexChanged(QString)), SLOT(sl_algorithmSelected(QString)));
connect(inNewWindowCheckBox, SIGNAL(clicked(bool)), SLOT(sl_inNewWindowCheckBoxChangeState(bool)));
connect(alignButton, SIGNAL(clicked()), SLOT(sl_alignButtonPressed()));
connect(outputFileSelectButton, SIGNAL(clicked()), SLOT(sl_checkState()));
connect(outputFileLineEdit, SIGNAL(textChanged(QString)), SLOT(sl_outputFileChanged()));
connect(firstSeqSelectorWC, SIGNAL(si_selectionChanged()), SLOT(sl_selectorTextChanged()));
connect(secondSeqSelectorWC, SIGNAL(si_selectionChanged()), SLOT(sl_selectorTextChanged()));
connect(msa->getMaObject(), SIGNAL(si_lockedStateChanged()), SLOT(sl_checkState()));
connect(msa->getMaObject(), SIGNAL(si_alignmentChanged(const MultipleAlignment&, const MaModificationInfo&)), SLOT(sl_alignmentChanged()));
}
void ShowHideSubgroupWidget::updateSubgroupState(bool isSubgroupOpened) {
innerWidget->setVisible(isSubgroupOpened);
emit si_subgroupStateChanged(subgroupId);
}
