void SPHSystem::writeFrame(float* c = 0) {
for (int i = 0; i < n; ++i) {
Vec x = p[i];
float ci = c ? c[i] : 0;
//cout << p[i].x << ' ' << p[i].y << ' '<< p[i].z << ' ' << ci << endl;
logstream.write(reinterpret_cast<const char*>(&x.x), sizeof(float));
logstream.write(reinterpret_cast<const char*>(&x.y), sizeof(float));
logstream.write(reinterpret_cast<const char*>(&x.z), sizeof(float));
logstream.write(reinterpret_cast<const char*>(&ci), sizeof(float));
}
vector<float> voxels = voxelize(64, 64, 64);
// write the voxels to a file
stringstream ss;
ss << "frame" << curframe << ".bin";
cout << "writing file " << ss.str() << " with " << voxels.size() << " voxels." << endl;
ofstream fout(ss.str(), ios::binary);
fout.write(reinterpret_cast<const char*>(&voxels[0]), sizeof(float)*voxels.size());
fout.close();
CIsoSurface<float> mc;
cout << "extracing mesh with marching cubes ..." << endl;
mc.GenerateSurface(&voxels[0], 1.0f, 63, 63, 63, 1.0, 1.0, 1.0);
cout << "done." << endl;
stringstream ss2;
ss2 << "frame" << curframe << ".obj";
cout << "writing file " << ss2.str() << endl;
mc.writeToFile(ss2.str());
}
void mesher::generateMesh( char ***A, sorter *sort, std::vector<particle *> &particles, FLOAT density, int mg,
std::vector<double> &vertices, std::vector<double> &normals, std::vector<int> &faces ) {
static float *dense_grid = new float[mg*mg*mg];
// Create Density Field
OPENMP_FOR FOR_EVERY_CELL(mg) {
double h = 1.0/(double)(mg-1);
double x = i*h;
double y = j*h;
double z = k*h;
FLOAT p[3] = { x, y, z };
double value = implicit::implicit_func( sort, p, density );
if( i==0 || i==mg-1 || j==0 || j==mg-1 || k==0 || k==mg-1 ) {
value = fmax(value,0.01);
}
dense_grid[(mg*mg)*k+mg*j+i] = -value;
} END_FOR
// Extract mesh
vertices.clear();
normals.clear();
faces.clear();
CIsoSurface<float> surface;
surface.GenerateSurface(dense_grid, 0, mg-1, mg-1, mg-1, 1.0/(mg-1), 1.0/(mg-1), 1.0/(mg-1));
for( int i=0; i<surface.m_nVertices; i++ ) {
for( int n=0; n<3; n++ ) vertices.push_back(surface.m_ppt3dVertices[i][n]);
}
for (unsigned int i = 0; i < surface.m_nTriangles; i++) {
unsigned int id0, id1, id2;
id0 = surface.m_piTriangleIndices[i*3];
id1 = surface.m_piTriangleIndices[i*3+1];
id2 = surface.m_piTriangleIndices[i*3+2];
FLOAT v0[3] = { vertices[3*id0+0], vertices[3*id0+1], vertices[3*id0+2] };
FLOAT v1[3] = { vertices[3*id1+0], vertices[3*id1+1], vertices[3*id1+2] };
FLOAT v2[3] = { vertices[3*id2+0], vertices[3*id2+1], vertices[3*id2+2] };
double maxlen = 0.1;
double maxlen2 = maxlen*maxlen;
if( length2(v0,v1) < maxlen2 && length2(v1,v2) < maxlen2 && length2(v0,v2) < maxlen2 ) {
faces.push_back(id0);
faces.push_back(id1);
faces.push_back(id2);
}
}
for( int i=0; i<surface.m_nNormals; i++ ) {
for( int n=0; n<3; n++ ) normals.push_back(surface.m_pvec3dNormals[i][n]);
}
// Smooth Vertices
vector<vector<int> > connections = buildConnection( vertices, normals, faces );
smoothMesh( sort, vertices, normals, connections, 2, 1, 1 );
// Align Normal Directions
// alignNormalToWalls( sort, vertices, normals );
}
void MarchingCubes::create_marching_cubes_from_array(const T* scalar_field, CVector mesh_dimensions, CVector box_length, double threshold, bool larger_than) {
int nx = mesh_dimensions.x;
int ny = mesh_dimensions.y;
int nz = mesh_dimensions.z;
initialize(nx*ny*nz);
num_vertices = 0;
num_triangles = 0;
Random *rnd = new Random(-time(NULL), 0, 0);
float r = 111/255.0;
float g = 133/255.0;
float b = 144/255.0;
// float r = rnd->next_double();
// float g = rnd->next_double();
// float b = rnd->next_double();
CIsoSurface<T> surf;
surf.GenerateSurface(scalar_field,threshold,nx-1,ny-1,nz-1,box_length.x, box_length.y, box_length.z, larger_than);
for(int triangle=0; triangle<surf.m_nTriangles; triangle++) {
unsigned int p1_index = surf.m_piTriangleIndices[3*triangle+0];
unsigned int p2_index = surf.m_piTriangleIndices[3*triangle+1];
unsigned int p3_index = surf.m_piTriangleIndices[3*triangle+2];
CVector p1(surf.m_ppt3dVertices[p1_index][0], surf.m_ppt3dVertices[p1_index][1], surf.m_ppt3dVertices[p1_index][2]);
CVector p2(surf.m_ppt3dVertices[p2_index][0], surf.m_ppt3dVertices[p2_index][1], surf.m_ppt3dVertices[p2_index][2]);
CVector p3(surf.m_ppt3dVertices[p3_index][0], surf.m_ppt3dVertices[p3_index][1], surf.m_ppt3dVertices[p3_index][2]);
VECTOR3D &norm1 = surf.m_pvec3dNormals[p1_index];
VECTOR3D &norm2 = surf.m_pvec3dNormals[p2_index];
VECTOR3D &norm3 = surf.m_pvec3dNormals[p3_index];
// CVector n1 = (p2 - p1).cross(p3 - p1).normalize();
// CVector n2 = (p2 - p1).cross(p3 - p1).normalize();
// CVector n3 = (p2 - p1).cross(p3 - p1).normalize();
CVector n1(norm1[0], norm1[1], norm1[2]);
CVector n2(norm2[0], norm2[1], norm2[2]);
CVector n3(norm3[0], norm3[1], norm3[2]);
CVector color(r,g,b);
// n1 = n1*(-1);
// n2 = n2*(-1);
// n3 = n3*(-1);
add_vertex(p1);
add_normal(n1);
add_color(color, 1.0);
add_vertex(p2);
add_normal(n2);
add_color(color, 1.0);
add_vertex(p3);
add_normal(n3);
add_color(color, 1.0);
continue;
n1 = n1*(-1);
n2 = n2*(-1);
n3 = n3*(-1);
p1 = p1+n1*0.01;
p2 = p2+n2*0.01;
p3 = p3+n3*0.01;
add_vertex(p1);
add_normal(n1);
add_color(color, 1.0);
add_vertex(p2);
add_normal(n2);
add_color(color, 1.0);
add_vertex(p3);
add_normal(n3);
add_color(color, 1.0);
}
cout << "Marching cubes created with " << surf.m_nTriangles << " triangles." << endl;
}