Exemplo n.º 1
0
void fillArr( vector<int> &arr, MSVS &mp ){
	arr.push_back( 0 );
	for( MSVS::iterator p = mp.begin(); p != mp.end() ; ++p ){
		string key;
		key = p->first;
		arr.push_back( getStart( key ) );
		arr.push_back( getEnd( key ) );
	}
}
Exemplo n.º 2
0
void main()
{
	string strWord,strKey;int i;MSVS msvsDictionary;
	while(cin>>strWord)
	{
		if(strWord.compare("XXXXXX")==0)break;
		strKey=strWord;sort(strKey.begin(),strKey.end());
		if(msvsDictionary.find(strKey)==msvsDictionary.end())
		{
			VS vsList;vsList.push_back(strWord);
			msvsDictionary.insert(MSVS::value_type(strKey,vsList));
		}
		else msvsDictionary[strKey].push_back(strWord);
	}
	while(cin>>strKey)
	{
		if(strKey.compare("XXXXXX")==0)break;
		sort(strKey.begin(),strKey.end());
		if(msvsDictionary.find(strKey)==msvsDictionary.end())cout<<"NOT A VALID WORD"<<endl;
		else
		{
			sort(msvsDictionary[strKey].begin(),msvsDictionary[strKey].end());
			for(i=0;i<msvsDictionary[strKey].size();i++)
				cout<<msvsDictionary[strKey][i]<<endl;
		}
		cout<<"******"<<endl;
	}
}
Exemplo n.º 3
0
// MSVS:map(START$END, set<Gene> ) ,  there is only one Gene in set
void block ( MSVS &mp ){
	MSVS::iterator p, pNext, pTmp;
	int pStart, pEnd, nextStart, nextEnd ; // two old 
	int leftEnd, midStart, midEnd, rightStart;    // three new
	string leftKey, midKey, rightKey;
	stringstream ss;
	if( mp.size() < 2 )
		return;
	p = mp.begin();
	pNext = p;
	++pNext ; 
	while( pNext != mp.end() ) {
		pStart = getStart( p->first );
		pEnd = getEnd( p->first );
		nextStart = getStart( pNext->first );
		nextEnd = getEnd( pNext->first );
		//cout << "Enter loop: p is ( " << pStart << ",  " << pEnd << "), pNext is ( " << nextStart << ", " << nextEnd << " )." << endl;
		if( nextStart > pEnd ){
			//cout << "no overlap " << endl;  //   (3,8 ) (9, 12 )   9 > 8
			p = pNext;
			++pNext;
			continue;
		}		

		if( nextStart > pStart ){
			//cout << "insert left " << endl;			
			leftEnd = nextStart - 1;
			ss.str("");
			ss << pStart << "$" << leftEnd;
			leftKey = ss.str();
			//cout << "leftKey is : " << leftKey << endl;
			mp.insert( MSVS::value_type ( leftKey, p->second ) );
		}
		if( nextEnd > pEnd ){   //  ( 3,10) (3,7)  10 > 7
			//cout << "insert right" << endl;
			rightStart = pEnd + 1;
			ss.str("");
			ss << rightStart << "$" << nextEnd ;
			rightKey = ss.str();
			//cout << "rightKey is : " << rightKey << endl;
			pTmp = mp.find( rightKey );
			if ( pTmp != mp.end() )
				pTmp->second.insert( pNext->second.begin(), pNext->second.end() );
			else
				mp.insert( MSVS::value_type( rightKey, pNext->second ) );
			if( nextStart > pStart ){
				//cout << "insert middle" << endl;
				midStart = nextStart;
				midEnd = pEnd;
				ss.str("");
				ss << midStart << "$" << midEnd ;
				midKey = ss.str();
				//cout << "midKey is : " << midKey << endl;
				mp.insert( MSVS::value_type( midKey, p->second ) );
				mp.erase( p );
				pTmp = mp.find( midKey );
				pTmp->second.insert( pNext->second.begin(), pNext->second.end() ); 
				p = pTmp;
			}
			else if ( nextStart == pStart ) 
				p->second.insert( pNext->second.begin(), pNext->second.end() );  
			mp.erase( pNext );
			pNext = p;
			++pNext;
		}
		// when nextEnd <= pEnd
		else {				
			pNext->second.insert( p->second.begin(), p->second.end() );	  // nextStart > pStart , nextEnd <= pEnd,  pNext is middle
			if ( nextEnd < pEnd ){   //   (4,6 ) (3,8)  
				//cout << "insert right " << endl;
				rightStart = nextEnd + 1;
				ss.str("");
				ss << rightStart << "$" << pEnd ;
				rightKey = ss.str();
				//cout << "rightKey is : " << rightKey << endl;
				pTmp = mp.find( rightKey );
				if( pTmp != mp.end() )
					pTmp->second.insert( p->second.begin(),p->second.end() );
				else
					mp.insert( MSVS::value_type ( rightKey, p->second ) );
			}
			mp.erase ( p ) ;
			p = pNext;
			++pNext;
		}
	}
}