void gaussFit(pair<int, double> bump, vector<pair<int, double> > shower, TH1D* reso, TH2D* resoPos)
{
TF2* g2d = new TF2("g2D", Gaus2D, -5, 5, -5, 5, 6);
g2d->SetParameters(IDtoX(bump.first),
IDtoY(bump.first),
1., 1., 0., (bump.second));
TH2D* histo = new TH2D("histo", "ShowerFit",
11, -5, 5,
11, -5, 5);
vector<pair<int, double> >::iterator b;
for (b=shower.begin(); b!=shower.end(); b++)
{
histo->Fill(IDtoX(b->first), IDtoY(b->first), b->second);
}
// g2d->FixParameter(4, 0.);
histo->Fit(g2d, "Q");
//g2d->Draw("cont1 same");
reso->Fill(g2d->GetParameter(5)-gammaEnergy);
resoPos->Fill(g2d->GetParameter(0), g2d->GetParameter(1));
}
//=============================================================================
// GetStartPosition
// is_vertex must be "true" when the vert is muon vertex
// is_vertex must be "false" when the vert is for reference
//=============================================================================
bool HTBlob::GetStartPosition( Minerva::IDBlob *idBlob, Gaudi::XYZPoint vert, bool is_vertex ) const
{
debug() << " HTBlob::GetStartPosition " << endmsg;
TH2D *hU = new TH2D ( "hU", "hU", 480,4510,9990,127,-1075,1075);
TH2D *hV = new TH2D ( "hV", "hV", 480,4510,9990,127,-1075,1075);
if ( is_vertex ){
hU->Fill( vert.z(), m_mathTool->calcUfromXY(vert.x(), vert.y()), 20 );
hV->Fill( vert.z(), m_mathTool->calcVfromXY(vert.x(), vert.y()), 20);
}
SmartRefVector<Minerva::IDCluster> idClusters = idBlob->clusters();
SmartRefVector<Minerva::IDCluster>::iterator itClus = idClusters.begin();
Gaudi::XYZPoint pos;
double Dx = 0.0;
double Dz = 0.0;
double distance = 0.0;
double vt_x = -9999;
double vt_u;
double vt_v;
double vt_z = -9999;
double vtX = -9999;
double vtY = -9999;
double vtZ = -9999;
double dis_min_x = 10000;
double xu[2] = {0.0};
double xv[2] = {0.0};
double zu[2] = {0.0};
double zv[2] = {0.0}; // to NC Pi0 events, there is no muon vertex
int countu = 0;
int countv = 0; // to NC Pi0 events, there is no muon vertex
for ( ; itClus != idClusters.end(); itClus++ ){
Dx = (*itClus)->position() - vert.x();
Dz = (*itClus)->z() - vert.z();// to avoid 0
if( (*itClus)->view()== Minerva::IDCluster::X ) {
distance = sqrt( pow(Dx,2) + pow(Dz,2) );
if (distance <= dis_min_x ) {
dis_min_x = distance;
vt_x = (*itClus)->position();
vt_z = (*itClus)->z();
}
}
if( (*itClus)->view()== Minerva::IDCluster::U ){
debug() << " StartPoint U view, pe " << (*itClus)->pe() << "; z = " << (*itClus)->z()
<< "; coord " << (*itClus)->position() << endmsg;
Dx = (*itClus)->position() - m_mathTool->calcUfromXY(vert.x(),vert.y());
distance = sqrt( pow(Dx,2) + pow(Dz,2) );
if ( is_vertex ) {
hU->Fill( (*itClus)->z()-12,(*itClus)->tpos1(), (*itClus)->pe()/distance );
hU->Fill( (*itClus)->z()+12,(*itClus)->tpos2(), (*itClus)->pe()/distance );
}
hU->Fill( (*itClus)->z(),(*itClus)->position(), (*itClus)->pe()/distance );
if ( countu < 2 ){
zu[countu] = (*itClus)->z();
xu[countu] = (*itClus)->position();
countu++;
}
}
if( (*itClus)->view()== Minerva::IDCluster::V ){
debug() << " StartPoint V view, pe " << (*itClus)->pe() << "; z = " << (*itClus)->z()
<< "; coord " << (*itClus)->position() << endmsg;
Dx = (*itClus)->position() - m_mathTool->calcVfromXY(vert.x(),vert.y());
distance = sqrt( pow(Dx,2) + pow(Dz,2) );
if ( is_vertex ){
hV->Fill( (*itClus)->z()-12,(*itClus)->tpos1(), (*itClus)->pe()/distance );
hV->Fill( (*itClus)->z()+12,(*itClus)->tpos2(), (*itClus)->pe()/distance );
}
hV->Fill( (*itClus)->z(),(*itClus)->position(), (*itClus)->pe()/distance );
if ( countv < 2 ){
zv[countu] = (*itClus)->z();
xv[countu] = (*itClus)->position();
countv++;
}
}
}
TF1 *fU, *fV;
double slopeu = -9999;
double slopev = -9999;
double bu = -9999;
double bv = -9999;
bool goodFit_U = false;
bool goodFit_V = false;
if ( hU->GetEntries() > 3 ){
hU->Fit("pol1","Q0");
fU = hU->GetFunction("pol1");
bu = fU->GetParameter(0);
slopeu = fU->GetParameter(1);
goodFit_U = true;
delete fU;
}
else if ( hU->GetEntries() == 2 ){ // to deal with 2 clusters on NCPi0
if ( zu[0] > zu[1] ){
slopeu = (xu[0] - xu[1]) / (zu[0] - zu[1]);
bu = xu[1] - zu[1]*slopeu;
goodFit_U = true;
}
else if (zu[0] < zu[1] ) {
slopeu = (xu[1] - xu[0]) / (zu[1] - zu[0]);
bu = xu[0] - zu[0]*slopeu;
goodFit_U = true;
}
}
if ( hV->GetEntries() > 3 ){
hV->Fit("pol1","Q0");
fV = hV->GetFunction("pol1");
bv = fV->GetParameter(0);
slopev = fV->GetParameter(1);
goodFit_V = true;
delete fV;
}
else if ( hV->GetEntries() == 2 ){ // to deal with 2 clusters on NCPi0
if ( zv[0] > zv[1] ){
slopev = (xv[0] - xv[1]) / (zv[0] - zv[1]);
bv = xv[1] - zv[1]*slopeu;
goodFit_V = true;
}
else if (zu[1] < zu[0] ) { /* Trung: why zu instead of zv? */
slopev = (xv[1] - xv[0]) / (zv[1] - zv[0]);
bv = xv[0] - zv[0]*slopev;
goodFit_V = true;
}
}
vtX = vt_x;
vtZ = vt_z;
debug() << " Startpoint, slope u " << slopeu << " slope v" << slopev << endmsg;
if ( goodFit_U && goodFit_V ){ //3D blobs
vt_u = slopeu*vt_z + bu;
vt_v = slopev*vt_z + bv;
vtY = m_mathTool->calcYfromUV(vt_u,vt_v);
}
else if ( goodFit_U ) { //2D blobs
vt_u = slopeu*vt_z + bu;
vtY = (vt_x*.5 - vt_u)*2/sqrt(3); //calcYfromXU?
}
else if ( goodFit_V ) { //2D blobs
vt_v = slopev*vt_z + bv;
vtY = (vt_v - vt_x*.5)*2/sqrt(3); //calcYfromXV?
}
pos.SetX(vtX); pos.SetY(vtY); pos.SetZ(vtZ);
idBlob->setStartPoint(pos);
debug() << " Setting StarPoint " << pos << " Blob" << idBlob << endmsg;
delete hU;
delete hV;
if (goodFit_U || goodFit_V) return true;
return false;
}
void clusterGaussReso() {
TFile* file = new TFile("complete.root");
TTree* tree = (TTree *)file->Get("Signal");
int nEvents = tree->GetEntries();
double addresses[121] = {};
for (int k=0; k<121; k++){
std::stringstream ss2;
ss2 << k;
string str = "Crystal_"+ss2.str();
const char* charstr = str.c_str();
tree->SetBranchAddress(charstr, &addresses[k]);
}
TH1D* energyResoG = new TH1D("energyResoG", "Gauss_Energy_Resolution",
100, -10, 10);
TH2D* posResoG = new TH2D("posResoG", "Gauss_Pos_Resolution",
11, -5, 5, 11, -5, 5);
double energyThresHi = 50.; //set energy threshold to start looking for bumps
double energyThresLo = .5; //energy lower bound
//Going through each scan of the calorimeter
for (int k=0; k<nEvents; k++)
{
tree->GetEntry(k);
pair<int, double> bump(0, 0.);
vector<pair<int, double> > geant;
vector<pair<int, double> > hitMap;
for(int i=0; i<121; i++)
{
pair<int, double> hit(i, addresses[i]);
geant.push_back(hit);
if (addresses[i] > energyThresHi)
{ hitMap.push_back(hit);}
if (hit.second>bump.second)
{ bump = hit;}
}
gaussFit(bump, geant, energyResoG, posResoG);
} //end of event
TCanvas* canvas = new TCanvas("canvas", "canvas", 700,700);
canvas->Divide(2, 1);
TF1* g1d = new TF1("g1d", "gaus", -10, 10);
TF2* g2d2 = new TF2("g2d2", Gaus2D, -10, 10, -10, 10, 6);
g2d2->SetParameters(0., 0., 1., 1., 0., 100000);
g2d2->FixParameter(4, 0.);
energyResoG->Fit(g1d);
canvas->cd(1); energyResoG->Draw();
posResoG->Fit(g2d2);
canvas->cd(2); posResoG->Draw("BOX");
}
void Eloss()
{
TString dir = getenv("VMCWORKDIR");
TString fFileNamebase;
std::ifstream* ElossData;
fFileNamebase = dir+"/macro/Simulation/data/109Pd_Eloss.txt";
ElossData = new std::ifstream(fFileNamebase.Data());
if(ElossData->fail()){
std::cout<<cRED<<" = No file found! Please, check the path. Current :"<<fFileNamebase.Data()<<cNORMAL<<std::endl;
}
TCanvas *c1 = new TCanvas();
c1->Draw();
c1->Divide(1,2);
TH2D *Bragg = new TH2D("Bragg", "Bragg", 1000, 0,500, 1000, 0, 1);
TH2D *Interpolate = new TH2D("Interpolate","Interpolate", 1000, 0,200000, 100, 0, 1);
Double_t Eloss_elec, Eloss_nuc,SRIM_energy;
Double_t x = 0; //microns
Double_t x1 = 0;
Double_t x0 = 0;
Double_t Z = 46;
Double_t A = 109;
Double_t step = 1; //microns
Double_t energy = 190000; //keV
Double_t e1, e2, e3, dE1, dE2, dE3;
Double_t param0, param1, param2,param3,param4,param5,param6;
std::vector<std::tuple<Double_t,Double_t,Double_t>> SRIM_table;
std::cout<<cGREEN<<"Extracting data. Please wait...."<<cNORMAL<<std::endl;
while (!ElossData->eof()){ //Fill vector with datafile
*ElossData>>SRIM_energy>>Eloss_elec>>Eloss_nuc; //keV >> keV/micron >> keV/micron
SRIM_table.push_back(std::make_tuple(SRIM_energy, Eloss_elec, Eloss_nuc));
Interpolate->Fill(SRIM_energy, Eloss_elec);
}//EndWhile
/*for (Int_t n = 0; n < SRIM_table.size(); n++){
std::cout <<' '<< std::get<0> (SRIM_table.at(n))<<' '<<std::get<1> (SRIM_table.at(n))<<' '<<std::get<2> (SRIM_table.at(n))<<std::endl;
}//EndFor
*/
/*Int_t counter = SRIM_table.size()-3;
Double_t nuc_Loss, elec_Loss, total_Loss;
e1 = std::get<0> (SRIM_table.at(counter));
e2 = std::get<0> (SRIM_table.at(counter-1));
e3 = std::get<0> (SRIM_table.at(counter-2));
dE1 = std::get<1> (SRIM_table.at(counter));
dE2 = std::get<1> (SRIM_table.at(counter-1));
dE3 = std::get<1> (SRIM_table.at(counter-2));
Interpolate->Fill(e1, dE1);
Interpolate->Fill(e2, dE2);
Interpolate->Fill(e3, dE3);
Interpolate->Fit("enFit");
param0 = enFit->GetParameter(0);
param1 = enFit->GetParameter(1);
while (energy>20){
if(energy>std::get<0> (SRIM_table.at(counter))){
elec_Loss = param0*energy+param1;
x+=step;
//nuc_Loss = (std::get<2> (SRIM_table.at(counter+1)))*step;
//elec_Loss = (std::get<1> (SRIM_table.at(counter+1)))*step;
total_Loss = elec_Loss; //+nuc_Loss;
energy -= total_Loss;
Bragg->Fill(x/1000, total_Loss*10);
std::cout<<energy<<" "<<total_Loss<<" "<<x<<std::endl;
}
else{
counter-=1;
Interpolate->Reset();
e1 = std::get<0> (SRIM_table.at(counter));
e2 = std::get<0> (SRIM_table.at(counter-1));
e3 = std::get<0> (SRIM_table.at(counter-2));
dE1 = std::get<1> (SRIM_table.at(counter));
dE2 = std::get<1> (SRIM_table.at(counter-1));
dE3 = std::get<1> (SRIM_table.at(counter-2));
Interpolate->Fill(e1, dE1);
Interpolate->Fill(e2, dE2);
Interpolate->Fill(e3, dE3);
Interpolate->Fit("enFit");
param0 = enFit->GetParameter(0);
param1 = enFit->GetParameter(1);
}
}//EndWhile
*/
TF1 *enFit = new TF1("enFit", "[0]+[1]*x+[2]*pow(x,2)+[3]*pow(x,3)+[4]*pow(x,4)+[5]*pow(x,5)+[6]*pow(x,6)", 0 , 200000);
enFit->SetParameters(1,1,1,1,1,1);
Interpolate->Fit("enFit");
param0 = enFit->GetParameter(0);
param1 = enFit->GetParameter(1);
param2 = enFit->GetParameter(2);
param3 = enFit->GetParameter(3);
param4 = enFit->GetParameter(4);
param5 = enFit->GetParameter(5);
param6 = enFit->GetParameter(6);
Double_t inter,loss;
std::cout<<"Calculating..................."<<std::endl;
while(energy>0){
x+=step;
inter = param0+ param1*energy+param2*pow(energy,2)+param3*pow(energy,3)+param4*pow(energy,4)+param5*pow(energy,5)+param6*pow(energy,6);
loss = inter*step;
energy -= loss;
Bragg->Fill(x/1000, loss); //mm, keV
}
std::cout<<cRED<<"Range: "<<x/1000<<" mm"<<cNORMAL<<std::endl;
TF1 *brFit = new TF1("brFit", "[0]+[1]*x+[2]*pow(x,2)+[3]*pow(x,3)+[4]*pow(x,4)+[5]*pow(x,5)+[6]*pow(x,6)", 0 , 500);
enFit->SetParameters(1,1,1,1,1,1);
Bragg->Fit("brFit");
c1->cd(1);
Bragg->Draw();
brFit->Draw("Same");
/*c1->cd(2);
Interpolate->Draw();
enFit->Draw("same");
*/
} //EndMacro
