Exemplo n.º 1
0
bool ZDvidSynapse::isProtocolVerified(const ZDvidTarget &target) const
{
  if (!isVerified()) {
    return false;
  }

  bool v = true;

  if (getKind() == EKind::KIND_PRE_SYN) {
    std::vector<ZIntPoint> psdArray = getPartners();
    if (!psdArray.empty()) {
      ZDvidReader reader;
      if (reader.open(target)) {
        for (std::vector<ZIntPoint>::const_iterator iter = psdArray.begin();
             iter != psdArray.end(); ++iter) {
          const ZIntPoint &pt = *iter;
          ZDvidSynapse synapse =
              reader.readSynapse(pt, flyem::EDvidAnnotationLoadMode::NO_PARTNER);
          if (!synapse.isVerified()) {
            v = false;
            break;
          }
        }
      }
    }
  } else {
    v = false;
  }

  return v;
}
Exemplo n.º 2
0
void ZDvidTile::setDvidTarget(const ZDvidTarget &target)
{
  m_dvidTarget = target;
  if (!m_tilingInfo.isValid()) {
    ZDvidReader reader;
    if (reader.open(target)) {
      m_tilingInfo = reader.readTileInfo(target.getMultiscale2dName());
    }
  }
}
Exemplo n.º 3
0
void ZDvidTile::update(int x, int y, int z, int width, int height)
{

  bool updating = false;
  if (m_stack == NULL) {
    m_stack = ZStackFactory::makeZeroStack(GREY, width, height, 1);
    m_stack->setOffset(x, y, z);
    updating = true;
  } else if (m_stack->getOffset().getZ() != z ||
             m_stack->getOffset().getX() != x ||
             m_stack->getOffset().getZ() != z ||
             m_stack->width() != width || m_stack->height() != height) {
    updating = true;
  }

  if (updating) {
    ZDvidReader reader;
    if (reader.open(m_dvidTarget)) {
      Stack *stack = reader.readTile(x, y, z, width, heigth, m_res.getLevel());
    }
  }

}
Exemplo n.º 4
0
void DvidImageDialog::setSinglePlane()
{
  if (m_singlePlaneDialog->exec()) {
    ZDvidReader reader;
    if (reader.open(m_dvidTarget)) {
      QString infoString = reader.readInfo("grayscale");

      qDebug() << infoString;

      ZDvidInfo dvidInfo;
      dvidInfo.setFromJsonString(infoString.toStdString());

      int z = m_singlePlaneDialog->getValue();

      ui->xSpinBox->setValue(dvidInfo.getStartCoordinates().getX());
      ui->ySpinBox->setValue(dvidInfo.getStartCoordinates().getY());
      ui->zSpinBox->setValue(z);

      ui->widthSpinBox->setValue(dvidInfo.getStackSize()[0]);
      ui->heightSpinBox->setValue(dvidInfo.getStackSize()[1]);
      ui->depthSpinBox->setValue(1);
    }
  }
}