void mitk::OverwriteSliceImageFilter::ItkImageProcessing(const itk::Image<TPixel1, VImageDimension1> *inputImage,
itk::Image<TPixel2, VImageDimension2> *outputImage)
{
typedef itk::Image<TPixel1, VImageDimension1> SliceImageType;
typedef itk::Image<short signed int, VImageDimension1> DiffImageType;
typedef itk::Image<TPixel2, VImageDimension2> VolumeImageType;
typedef itk::ImageSliceIteratorWithIndex<VolumeImageType> OutputSliceIteratorType;
typedef itk::ImageRegionConstIterator<SliceImageType> InputSliceIteratorType;
typedef itk::ImageRegionIterator<DiffImageType> DiffSliceIteratorType;
typename VolumeImageType::RegionType sliceInVolumeRegion;
sliceInVolumeRegion = outputImage->GetLargestPossibleRegion();
sliceInVolumeRegion.SetSize(m_SliceDimension, 1); // just one slice
sliceInVolumeRegion.SetIndex(m_SliceDimension, m_SliceIndex); // exactly this slice, please
OutputSliceIteratorType outputIterator(outputImage, sliceInVolumeRegion);
outputIterator.SetFirstDirection(m_Dimension0);
outputIterator.SetSecondDirection(m_Dimension1);
InputSliceIteratorType inputIterator(inputImage, inputImage->GetLargestPossibleRegion());
typename DiffImageType::Pointer diffImage;
CastToItkImage(m_SliceDifferenceImage, diffImage);
DiffSliceIteratorType diffIterator(diffImage, diffImage->GetLargestPossibleRegion());
// iterate over output slice (and over input slice simultaneously)
outputIterator.GoToBegin();
inputIterator.GoToBegin();
diffIterator.GoToBegin();
while (!outputIterator.IsAtEnd())
{
while (!outputIterator.IsAtEndOfSlice())
{
while (!outputIterator.IsAtEndOfLine())
{
diffIterator.Set(static_cast<short signed int>(inputIterator.Get() -
outputIterator.Get())); // oh oh, not good for bigger values
outputIterator.Set((TPixel2)inputIterator.Get());
++outputIterator;
++inputIterator;
++diffIterator;
}
outputIterator.NextLine();
}
outputIterator.NextSlice();
}
}
void mitk::DiffImageApplier::ItkImageProcessing2DDiff( itk::Image<TPixel1,VImageDimension1>* diffImage, itk::Image<TPixel2,VImageDimension2>* outputImage )
{
typedef itk::Image<TPixel1, VImageDimension1> DiffImageType;
typedef itk::Image<TPixel2, VImageDimension2> VolumeImageType;
typedef itk::ImageSliceIteratorWithIndex< VolumeImageType > OutputSliceIteratorType;
typedef itk::ImageRegionConstIterator< DiffImageType > DiffSliceIteratorType;
typename VolumeImageType::RegionType sliceInVolumeRegion;
sliceInVolumeRegion = outputImage->GetLargestPossibleRegion();
sliceInVolumeRegion.SetSize( m_SliceDimension, 1 ); // just one slice
sliceInVolumeRegion.SetIndex( m_SliceDimension, m_SliceIndex ); // exactly this slice, please
OutputSliceIteratorType outputIterator( outputImage, sliceInVolumeRegion );
outputIterator.SetFirstDirection(m_Dimension0);
outputIterator.SetSecondDirection(m_Dimension1);
DiffSliceIteratorType diffIterator( diffImage, diffImage->GetLargestPossibleRegion() );
// iterate over output slice (and over input slice simultaneously)
outputIterator.GoToBegin();
diffIterator.GoToBegin();
while ( !outputIterator.IsAtEnd() )
{
while ( !outputIterator.IsAtEndOfSlice() )
{
while ( !outputIterator.IsAtEndOfLine() )
{
TPixel2 newValue = outputIterator.Get() + (TPixel2) ((double)diffIterator.Get() * m_Factor);
outputIterator.Set( newValue );
++outputIterator;
++diffIterator;
}
outputIterator.NextLine();
}
outputIterator.NextSlice();
}
}