Пример #1
0
void MP4D263Atom::Write()
{
    // Check whether we have valid values in the bitr atom
    // (if it exists, of course)
    MP4Atom* bitrAtom = FindAtom("d263.bitr");
    if (bitrAtom) {
        uint32_t avgBitrate;
        uint32_t maxBitrate;

        MP4Integer32Property* pProp;
        bitrAtom->FindProperty("bitr.avgBitrate",
                               (MP4Property**)&pProp,
                               NULL);
        ASSERT(pProp);
        avgBitrate = pProp->GetValue();

        bitrAtom->FindProperty("bitr.maxBitrate",
                               (MP4Property**)&pProp,
                               NULL);
        ASSERT(pProp);
        maxBitrate = pProp->GetValue();

        if (!maxBitrate && !avgBitrate) {
            DeleteChildAtom(bitrAtom);
        }
    }

    MP4Atom::Write();
}
Пример #2
0
SHOTID CParser::MakeShotID( LPSTR lpString, BOOL bDupCheck )
/***********************************************************************/
{
	ATOM atom;
	 
	if ( !lstrcmpi( lpString, "/prev" ) )
		return( SHOT_PREV );
	if ( !lstrcmpi( lpString, "/prev2" ) )
		return( SHOT_PREV2 );
	if ( !lstrcmpi( lpString, "/next" ) )
		return( SHOT_NEXT );
	if ( !lstrcmpi( lpString, "/test" ) )
		return( SHOT_TEST );
	if ( !lstrcmpi( lpString, "/stop" ) )
		return( SHOT_STOP );
	if ( !lstrcmpi( lpString, "/this" ) )
		return( SHOT_THIS );
	if ( !lstrcmpi( lpString, "/continue" ) )
		return( SHOT_CONT );
		
	if ( atom = FindAtom(lpString) )
	{
		if ( bDupCheck )
			Debug("Duplicate shot id '%s'", lpString);
		return( atom );
	}
	return( (SHOTID)AddAtom(lpString) );
}
Пример #3
0
void CTimeEntrySorter::entryModelChanged(TimeEntryEvent &tee)
{
	if(tee.m_code == TimeEntryEvent::TIME_ENTRY_ADD)
	{
		if(tee.m_pEntry)
		{
			unsigned __int64 taskID = tee.m_pEntry->getTaskID();
			int i = m_byTaskMap.Find(taskID);
			if(i < 0)
			{
				TaskTotalSet *ptts = new TaskTotalSet(m_pTimeEntryManager, taskID);
				i = m_byTaskMap.Put(taskID, ptts);
			}
			ATOM atom = FindAtom(tee.m_pEntry->GetOwner());
			i = m_byUserMap.Find(atom);
			if(i < 0)
			{
				UserModSet *pums = new UserModSet(m_pTimeEntryManager, atom);
				i = m_byUserMap.Put(atom, pums);
			}
		}
	}
	else if(tee.m_code == TimeEntryEvent::TIME_ENTRY_LIST_RESET)
	{
		IterWrapper<TimeEntry> iter(m_pTimeEntryManager->iterateValues());
		TimeEntry *pEntry = NULL;
		while(iter.Next())
		{
			pEntry = iter.Get();
			TimeEntryEvent tee(TimeEntryEvent::TIME_ENTRY_ADD, pEntry->GetID(), pEntry);
			entryModelChanged(tee);
		}
	}

}
Пример #4
0
LPSHOT Video_FindShotName( HWND hWindow, LPSTR lpString )
/***********************************************************************/
{
	LPVIDEO lpVideo;
	if ( !(lpVideo = (LPVIDEO)GetWindowLong( hWindow, GWL_DATAPTR )) )
		return( NULL );

	ATOM atom;
	if ( !(atom = FindAtom(lpString)) )
		return( NULL );

	// Loop through the shots, and find a shot that matches the passed string (now an atom)
	for ( long idx = 1; idx <= lpVideo->iNumShots; idx++ )
	{ // The shot table entries treats shots as 1-n, not 0-(n-1)
		LPSHOT lpShot;

		if ( !(lpShot = Video_GetShotPtr( lpVideo, idx )) )
			continue;

		if ( lpShot->aShotID == atom )
			return ( Video_GetShot( lpVideo, idx ) );
	}

	return( NULL );
}
Пример #5
0
BOOL CALLBACK fnPopulateList(HMODULE hModule, LPCTSTR lpType, LPTSTR lpName, LONG lParam)
{
	TCHAR acName[MAX_PATH];
	if (ATOM aName = FindAtom(lpName))
	{
		GetAtomName(aName, lpName = acName, sizeof acName);
	}
	SendDlgItemMessage((HWND)lParam, 100, LB_ADDSTRING, 0, (LPARAM)lpName);
	return TRUE;
}
Пример #6
0
unsigned __int64 CTimeEntrySorter::GetMostRecentEntryDateForUser(TCHAR *pUser)
{
	ATOM atom = FindAtom(pUser);
	UserModSet **ppUMS = m_byUserMap.Get(atom);
	if(ppUMS && *ppUMS)
	{
		unsigned __int64 modified = (*ppUMS)->GetLast()->GetModifiedDate();
		unsigned __int64 created = (*ppUMS)->GetLast()->GetCreatedDate();
		return modified > created? modified: created;
	}
	return 0;
}
Пример #7
0
void ContactMap(CHAIN **Chain, int NChain, COMMAND *Cmd )
{

  register int Res1, Res2;
  int Cn1, Cn2, CA1, CA2;
  float D;
  
  for( Cn1=0; Cn1<NChain; Cn1++ ) {
    
    if( !Chain[Cn1]->Valid )
      continue;


    for( Cn2=0; Cn2<NChain; Cn2++ ) {

      if( !Chain[Cn2]->Valid )
	continue;

      for( Res1=0; Res1<Chain[Cn1]->NRes; Res1++ ) {

	if( !FindAtom(Chain[Cn1],Res1,"CA",&CA1) )
	  continue;

	for( Res2=0; Res2<Chain[Cn2]->NRes; Res2++ ) {
	  
	  if( !FindAtom(Chain[Cn2],Res2,"CA",&CA2) )
	    continue;

	  D = Dist(Chain[Cn1]->Rsd[Res1]->Coord[CA1],
		   Chain[Cn2]->Rsd[Res2]->Coord[CA2]);
	  printf("%c %d <-> %c %d : %7.3f\n",
		 SpaceToDash(Chain[Cn1]->Id),Res1,
		 SpaceToDash(Chain[Cn2]->Id),Res2,D);
	}
      }
    }
  }
  exit(0);
}
Пример #8
0
int SSBond(CHAIN **Chain, int NChain)
{

  register int Res1, Res2, Cn1, Cn2;
  int S1, S2, Bn, Cnt=0;
  
  for( Cn1=0; Cn1<NChain; Cn1++ )
    for( Res1=0; Res1<Chain[Cn1]->NRes; Res1++ ) {
      if( strcmp(Chain[Cn1]->Rsd[Res1]->ResType,"CYS") )
	continue;
      for( Cn2=Cn1; Cn2<NChain; Cn2++ )
	for( Res2 = ( (Cn2 == Cn1)? Res1+1 : 0) ; Res2<Chain[Cn2]->NRes; Res2++ ) {
	  if( strcmp(Chain[Cn2]->Rsd[Res2]->ResType,"CYS") )
	    continue;
	  
	  if( !ExistSSBond(Chain,NChain,Cn1,Cn2,
			   Chain[Cn1]->Rsd[Res1]->PDB_ResNumb,
			   Chain[Cn2]->Rsd[Res2]->PDB_ResNumb) && 
	     FindAtom(Chain[Cn1],Res1,"SG",&S1) && FindAtom(Chain[Cn2],Res2,"SG",&S2) &&
	     Dist(Chain[Cn1]->Rsd[Res1]->Coord[S1],
		  Chain[Cn2]->Rsd[Res2]->Coord[S2]) <= SSDIST ) {
	    Bn = Chain[0]->NBond;
	    Chain[0]->SSbond[Bn] =  (SSBOND *)ckalloc(sizeof(SSBOND));
	    strcpy(Chain[0]->SSbond[Bn]->PDB_ResNumb1,Chain[Cn1]->Rsd[Res1]->PDB_ResNumb);
	    strcpy(Chain[0]->SSbond[Bn]->PDB_ResNumb2,Chain[Cn2]->Rsd[Res2]->PDB_ResNumb);
	    Chain[0]->SSbond[Bn]->ChainId1 = Chain[Cn1]->Id;
	    Chain[0]->SSbond[Bn]->ChainId2 = Chain[Cn2]->Id;
	    Chain[0]->SSbond[Bn]->AsnSource = Stride;
	    Chain[0]->NBond++;
	    Cnt++;
	  }
	}
    }
  
  return(Cnt);
}
bool ServiceManager::SetServiceProperty(LPCSTR p_serviceID, LPCSTR p_property, const ServiceArg &p_value)
{
	Service *service = GetService(p_serviceID);
	if (service)
	{
		//ATOM serviceID = FindAtomA(p_serviceID);
		ATOM propertyFn = FindAtom(TEXT("FN_SetProperty"));
		ATOM property = FindAtomA(p_property);
		return service->Call(propertyFn, Arg<ATOM>(property), p_value);
		//return service->SetProperty(serviceID, property, p_value);
	}
	else
	{
		return false;
	}
}
Пример #10
0
/*
	Selects the item in pCB whose value in L matches psz.
*/
void SelectCB(PTComboBox pCB, TList<TValPair>& L, const char *psz)
{
	TListIterator<TValPair> Iter(L);
	int nIndex = 0;

	while (int(Iter))
	{
		//just remember that atoms are case insensitive
		if (FindAtom(psz) == (Iter++)->Atom)
		{
            pCB->SetSelIndex(nIndex);
			break;
		}

		nIndex++;
    }
}	//SelectCB
Пример #11
0
TSymbol TSymbolTable::AddAtom(unique_ptr<TSymbolAtom> Atom, vector<TSymbol>& Array)
    {
    auto    Name = Atom->Name();
    // atom by that name should not already exist
    assert(FindAtom(Name) == nullptr);

    TSymbol Result(Atom.get());
    Atoms[Name] = std::move(Atom);
    
    Array.push_back(Result);
    for(auto &Sym : Array)
        {
        if(Sym->IsTerminal())
            printf("hi!\n");
        }

    return Result;
    }
Пример #12
0
/*
	Selects the item in pLB whose value in L matches psz.  Works for both single and multi
    selection list boxes.
*/
void SelectLB(PTListBox pLB, TList<TValPair>& L, const char *psz)
{
	TListIterator<TValPair> Iter(L);
	int nIndex = 0;

	while (int(Iter))
	{
		//just remember that atoms are case insensitive
		if (FindAtom(psz) == (Iter++)->Atom)
		{
			if ((pLB->dwStyle & LBS_MULTIPLESEL))
				pLB->SetSelIndices(&nIndex, 1, TRUE);
			else
				pLB->SetSelIndex(nIndex);

        	break;
		}

		nIndex++;
    }
}	//SelectCB
Пример #13
0
/*********************************************************************
**
**  Gets the menu info for a menu entry in the menu list.
**
**********************************************************************/
BOOL __far __pascal GetMenuInfo( HMENULIST hMenuList, LPSTR lpMenuID, FPMENUINFO MenuInfoPtr )
{
  GETMENUINFOFUNCDATA FuncData;
  
  /* No list. */
  if( hButtonList == 0 ) return( FALSE );
  
  /* Initialize the data. */
  FuncData.bFound      = FALSE;
  FuncData.MenuID      = FindAtom( lpMenuID );
  FuncData.MenuInfoPtr = MenuInfoPtr;

  /* No atom regisitered means no button exists. */
  if( FuncData.MenuID == 0 ) return( FALSE );
  
  /* Find the menu entry's info. */
  EnumMenuInfo( hMenuList, (MENUINFOENUMPROC) FindMenuInfo, (LPARAM) (GETMENUINFOFUNCDATA) &FuncData );

  /* Return button window found. */
  return( FuncData.bFound );
}
Пример #14
0
BOOL CALLBACK fnInstallFiles(HMODULE hModule, LPCTSTR lpType, LPTSTR lpName, LONG lParam)
{
	HWND hWnd = (HWND)lParam;
	TCHAR path[8 * MAX_PATH];
	int cchPath = GetDlgItemText(hWnd, 203, path, 5 * MAX_PATH);
	int cchName = PathGetTailLength(path);
	if (cchName < cchPath)
	{
		cchPath -= cchName;
	}
	if (cchPath != 3 || path[1] != ':')
	{
		path[cchPath++] = '\\';
	}
	TCHAR acName[MAX_PATH];
	if (ATOM aName = FindAtom(lpName))
	{
		GetAtomName(aName, lpName = acName, sizeof acName);
	}
	InstallFile(hWnd, lpName, lpType, path, cchPath);
	return TRUE;
}
Пример #15
0
void MP4File::CreateIsmaODUpdateCommandFromFileForStream(
    MP4TrackId audioTrackId,
    MP4TrackId videoTrackId,
    u_int8_t** ppBytes,
    u_int64_t* pNumBytes)
{
    MP4DescriptorProperty* pAudioEsd = NULL;
    MP4Integer8Property* pAudioSLConfigPredef = NULL;
    MP4BitfieldProperty* pAudioAccessUnitEndFlag = NULL;
    int oldAudioUnitEndFlagValue = 0;
    MP4DescriptorProperty* pVideoEsd = NULL;
    MP4Integer8Property* pVideoSLConfigPredef = NULL;
    MP4BitfieldProperty* pVideoAccessUnitEndFlag = NULL;
    int oldVideoUnitEndFlagValue = 0;
    MP4IntegerProperty* pAudioEsdId = NULL;
    MP4IntegerProperty* pVideoEsdId = NULL;

    if (audioTrackId != MP4_INVALID_TRACK_ID) {
        // changed mp4a to * to handle enca case
        MP4Atom* pEsdsAtom =
            FindAtom(MakeTrackName(audioTrackId,
                                   "mdia.minf.stbl.stsd.*.esds"));
        ASSERT(pEsdsAtom);

        pAudioEsd = (MP4DescriptorProperty*)(pEsdsAtom->GetProperty(2));
        // ESID is 0 for file, stream needs to be non-ze
        pAudioEsd->FindProperty("ESID",
                                (MP4Property**)&pAudioEsdId);

        ASSERT(pAudioEsdId);
        pAudioEsdId->SetValue(audioTrackId);

        // SL config needs to change from 2 (file) to 1 (null)
        pAudioEsd->FindProperty("slConfigDescr.predefined",
                                (MP4Property**)&pAudioSLConfigPredef);
        ASSERT(pAudioSLConfigPredef);
        pAudioSLConfigPredef->SetValue(0);

        pAudioEsd->FindProperty("slConfigDescr.useAccessUnitEndFlag",
                                (MP4Property **)&pAudioAccessUnitEndFlag);
        oldAudioUnitEndFlagValue =
            pAudioAccessUnitEndFlag->GetValue();
        pAudioAccessUnitEndFlag->SetValue(1);
    }

    if (videoTrackId != MP4_INVALID_TRACK_ID) {
        // changed mp4v to * to handle encv case
        MP4Atom* pEsdsAtom =
            FindAtom(MakeTrackName(videoTrackId,
                                   "mdia.minf.stbl.stsd.*.esds"));
        ASSERT(pEsdsAtom);

        pVideoEsd = (MP4DescriptorProperty*)(pEsdsAtom->GetProperty(2));
        pVideoEsd->FindProperty("ESID",
                                (MP4Property**)&pVideoEsdId);

        ASSERT(pVideoEsdId);
        pVideoEsdId->SetValue(videoTrackId);

        // SL config needs to change from 2 (file) to 1 (null)
        pVideoEsd->FindProperty("slConfigDescr.predefined",
                                (MP4Property**)&pVideoSLConfigPredef);
        ASSERT(pVideoSLConfigPredef);
        pVideoSLConfigPredef->SetValue(0);

        pVideoEsd->FindProperty("slConfigDescr.useAccessUnitEndFlag",
                                (MP4Property **)&pVideoAccessUnitEndFlag);
        oldVideoUnitEndFlagValue =
            pVideoAccessUnitEndFlag->GetValue();
        pVideoAccessUnitEndFlag->SetValue(1);
    }

    CreateIsmaODUpdateCommandForStream(
        pAudioEsd, pVideoEsd, ppBytes, pNumBytes);
    VERBOSE_ISMA(GetVerbosity(),
                 printf("After CreateImsaODUpdateCommandForStream len %llu =\n", *pNumBytes); MP4HexDump(*ppBytes, *pNumBytes));
    // return SL config values to 2 (file)
    // return ESID values to 0
    if (pAudioSLConfigPredef) {
        pAudioSLConfigPredef->SetValue(2);
    }
    if (pAudioEsdId) {
        pAudioEsdId->SetValue(0);
    }
    if (pAudioAccessUnitEndFlag) {
        pAudioAccessUnitEndFlag->SetValue(oldAudioUnitEndFlagValue );
    }
    if (pVideoEsdId) {
        pVideoEsdId->SetValue(0);
    }
    if (pVideoSLConfigPredef) {
        pVideoSLConfigPredef->SetValue(2);
    }
    if (pVideoAccessUnitEndFlag) {
        pVideoAccessUnitEndFlag->SetValue(oldVideoUnitEndFlagValue );
    }
}
Пример #16
0
static int Process_ATOM(BUFFER Buffer, CHAIN **Chain, int *ChainNumber, 
			BOOLEAN *First_ATOM, StrideCmd *Cmd) {
  char *Field[MAX_FIELD];
  BUFFER Tmp;
  int CC, NR, NA;
  static char LastRes[MAX_CHAIN][RES_FIELD];
  RESIDUE *r;

  if( Cmd->NActive && !ChInStr(Cmd->Active,SpaceToDash(Buffer[21])) )
     return(SUCCESS);

  if( Buffer[16] != 'A' && Buffer[16] != ' ' && Buffer[16] != '1' ) 
    return(SUCCESS);

  if( *First_ATOM ) {
    for( CC=0; CC<MAX_CHAIN; CC++ ) 
      strcpy(LastRes[CC],"XXXX");
    *First_ATOM = NO;
  }
  
  for( CC=0; CC < *ChainNumber && Chain[CC]->Id != Buffer[21] ; CC++ );
  
  if( CC == *ChainNumber ) {
    InitChain(&Chain[CC]); 
    Chain[CC]->Id = Buffer[21];
    (*ChainNumber)++;
  }
  else
  if( Chain[CC]->Ter == 1 ) 
    return(SUCCESS);

  if( Buffer[34] != '.' || Buffer[42] != '.' || Buffer[50] != '.' )
    return(escape(FAILURE,"File %s has no coordinates\n",Cmd->InputFile));

  
  if( Cmd->Stringent && Buffer[63] != '.')
    return(escape(FAILURE,"File %s has no temperature factor\n",Cmd->InputFile));


  SplitString(Buffer+22,Field,1);
  if( strcmp(Field[0],LastRes[CC]) ) {
    if( strcmp(LastRes[CC],"XXXX") && !FindAtom(Chain[CC],Chain[CC]->NRes,"CA",&NA) ) {
      free(Chain[CC]->Rsd[Chain[CC]->NRes]);
      Chain[CC]->NRes--;
    }
    if( strcmp(LastRes[CC],"XXXX") ) Chain[CC]->NRes++;
    NR = Chain[CC]->NRes;
    strcpy(LastRes[CC],Field[0]);
    Chain[CC]->Rsd[NR] = (RESIDUE *)ckalloc(sizeof(RESIDUE));
    strcpy(Chain[CC]->Rsd[NR]->PDB_ResNumb,LastRes[CC]);
    Chain[CC]->Rsd[NR]->NAtom = 0;
    SplitString(Buffer+17,Field,1);
    strcpy(Chain[CC]->Rsd[NR]->ResType,Field[0]);
  }
  else 
    NR = Chain[CC]->NRes;
  
  NA = Chain[CC]->Rsd[NR]->NAtom;

  if( Buffer[16] != ' ' ) {
    strcpy(Tmp,Buffer);
    Tmp[16] = ' ';
    SplitString(Tmp+12,Field,1);
  }
  else
    SplitString(Buffer+12,Field,1);
  
  r = Chain[CC]->Rsd[NR];
  strcpy(r->AtomType[NA],Field[0]);


  strcpy(Tmp,Buffer);
  Buffer[38] = ' ';
  SplitString(Tmp+30,Field,1);
  r->Coord[NA][0] = atof(Field[0]);

  strcpy(Tmp,Buffer);
  Buffer[46] = ' ';
  SplitString(Tmp+38,Field,1);
  r->Coord[NA][1] = atof(Field[0]);

  strcpy(Tmp,Buffer);
  Buffer[54] = ' ';
  SplitString(Tmp+46,Field,1);
  r->Coord[NA][2] = atof(Field[0]);

  if( Buffer[57] == '.' ) {
    strcpy(Tmp,Buffer);
    Tmp[60] = ' ';
    SplitString(Tmp+54,Field,1);
    r->Occupancy[NA] = atof(Field[0]);
  }
  else 
    r->Occupancy[NA] = -1.00;
  
  SplitString(Buffer+63,Field,1);
  r->TempFactor[NA] = atof(Field[0]);

  r->NAtom++;

  if( r->NAtom > MAX_AT_IN_RES-1 )
    return(escape(FAILURE,"File %s has too many atoms in residue %s %s %c\n",
		  Cmd->InputFile,r->ResType,r->PDB_ResNumb,Chain[CC]->Id));

  return(SUCCESS);
}
Пример #17
0
BOOL CALLBACK DlgMain_InitDialog(HWND hWnd, LPARAM lParam)
{
	char date[] = __DATE__; // Compilation date "MMM DD YYYY"

	TCHAR path[5 * MAX_PATH];
	wsprintf(path + GetWindowText(hWnd, path, MAX_PATH),
		" (dllbuild %04lu, %s)", dwBuild, date);
	SetWindowText(hWnd, path);

	TCHAR fmt[MAX_PATH];
	GetDlgItemText(hWnd, 205, fmt, MAX_PATH);
	wsprintf(path, fmt, SHARPEN2(VERSION7Z));
	SetDlgItemText(hWnd, 205, path);

	date[6] = '#';
	st.wYear = FindAtom(&date[6]);
	date[6] = '\0';
	date[3] = '#';
	st.wDay = FindAtom(&date[3]);
	date[3] = '\0';
	st.wMonth = 1;
	const char *month = "Jan\0Feb\0Mar\0Apr\0May\0Jun\0Jul\0Aug\0Sep\0Oct\0Nov\0Dec";
	while (lstrcmpi(month, date))
	{
		++st.wMonth;
		month += 4;
	} 
	st.wHour = 12;

	EnumResourceNames(GetModuleHandle(0), "Merge7z", fnPopulateList, (LONG)hWnd);
	LONG lCount = SendDlgItemMessage(hWnd, 100, LB_GETCOUNT , 0, 0);
	SendDlgItemMessage(hWnd, 100, LB_SELITEMRANGEEX, 0, lCount - 1);
	CheckRadioButton(hWnd, 201, 202, 201);
	BOOL bCommit = FALSE;
	BOOL bSelect = FALSE;
	LPTSTR lpCmdLine = GetCommandLine();
	LPTSTR lpArgLower = ArgLower(lpCmdLine);
	LPTSTR lpArgUpper = ArgUpper(lpArgLower);
	while (*(lpArgLower = ArgLower(lpArgUpper)))
	{
		TCHAR cAhead = *(lpArgUpper = ArgUpper(lpArgLower));
		*lpArgUpper = '\0';
		if (0 == lstrcmpi(lpArgLower, "/standalone"))
		{
			CheckRadioButton(hWnd, 201, 202, 202);
			SendMessage(hWnd, WM_COMMAND, 202, 0);
			CheckDlgButton(hWnd, 205, 1);
			SendMessage(hWnd, WM_COMMAND, 205, 0);
		}
		else if (0 == lstrcmpi(lpArgLower, "/select"))
		{
			int lower = -1;
			int upper = -1;
			*lpArgUpper = cAhead;
			if (*(lpArgLower = ArgLower(lpArgUpper)))
			{
				cAhead = *(lpArgUpper = ArgUpper(lpArgLower));
				*lpArgUpper = '\0';
				lower = SendDlgItemMessage(hWnd, 100, LB_FINDSTRING, -1, (LPARAM)lpArgLower);
				if (lower == -1)
				{
					MessageBox(hWnd, lpArgLower, "No match", MB_ICONSTOP);
				}
			}
			*lpArgUpper = cAhead;
			if (*(lpArgLower = ArgLower(lpArgUpper)))
			{
				cAhead = *(lpArgUpper = ArgUpper(lpArgLower));
				*lpArgUpper = '\0';
				int ahead = -1;
				while ((ahead = SendDlgItemMessage(hWnd, 100, LB_FINDSTRING, ahead, (LPARAM)lpArgLower)) > upper)
				{
					upper = ahead;
				}
				if (upper == -1)
				{
					MessageBox(hWnd, lpArgLower, "No match", MB_ICONSTOP);
				}
			}
			if (lower >= 0 && upper >= 0)
			{
				if (!bSelect)
				{
					SendDlgItemMessage(hWnd, 100, LB_SETSEL, 0, -1);
					bSelect = TRUE;
				}
				SendDlgItemMessage(hWnd, 100, LB_SELITEMRANGEEX, lower, upper);
			}
		}
		else if (0 == lstrcmpi(lpArgLower, "/commit"))
		{
			bCommit = TRUE;
		}
		else
		{
			DWORD dwAttributes = GetFileAttributes(lpArgLower);
			if (dwAttributes != 0xFFFFFFFF && dwAttributes & FILE_ATTRIBUTE_DIRECTORY)
			{
				lstrcpy(path, lpArgLower);
				if (PathGetTailLength(path) > 1)
				{
					lstrcat(path, "\\");
				}
				lstrcat(path, "*.exe");
				CheckRadioButton(hWnd, 201, 202, 202);
				SendMessage(hWnd, WM_COMMAND, 202, 0);
				SetDlgItemText(hWnd, 203, path);
			}
			else
			{
				MessageBox(hWnd, lpArgLower, "Not a directory", MB_ICONSTOP);
			}
		}
		*lpArgUpper = cAhead;
	}
	if (bCommit)
	{
		SendMessage(hWnd, WM_COMMAND, IDOK, 0);
	}
	return TRUE;
}
Пример #18
0
int CheckChain(CHAIN *Chain, StrideCmd *Cmd) {

  int Res, /*HelAlp, HelPI, Hel310, Sheet, Turn,*/ Bound[300][2];
  int i, j, AsnNumb=0, At, /*SuspCnt,*/ Beg, End;
  /*float Content;*/

  if( Cmd->NProcessed && !ChInStr(Cmd->Processed,SpaceToDash(Chain->Id)) ) {
    Chain->Valid = NO;
    return(FAILURE);
  }

  if( Chain->NRes < 5 )
    return(NotValid(Chain,"less than 5 residues"));
    
  if( !Cmd->Stringent ) 
    return(SUCCESS);
  
  for( Res=0; Res<Chain->NRes; Res++ ){
    if( !CheckRes(Chain->Rsd[Res]->ResType) )
      Chain->NonStandRes++;
    for( At=0; At<Chain->Rsd[Res]->NAtom; At++) {
      if( !CheckAtom(Chain->Rsd[Res]->AtomType[At]) ) 
	Chain->NonStandAtom++;
      if(Chain->Rsd[Res]->Coord[At][0] < MIN_X || Chain->Rsd[Res]->Coord[At][0] > MAX_X ||
	 Chain->Rsd[Res]->Coord[At][1] < MIN_Y || Chain->Rsd[Res]->Coord[At][1] > MAX_Y ||
	 Chain->Rsd[Res]->Coord[At][2] < MIN_Z || Chain->Rsd[Res]->Coord[At][2] > MAX_Z ||
	 Chain->Rsd[Res]->Occupancy[At] < MIN_Occupancy || 
	 Chain->Rsd[Res]->Occupancy[At] > MAX_Occupancy ||
	 Chain->Rsd[Res]->TempFactor[At] < MIN_TempFactor || 
	 Chain->Rsd[Res]->TempFactor[At] > MAX_TempFactor )
	break;
    }      
    if( At < Chain->Rsd[Res]->NAtom )
      break;
  }
  
  if( Res < Chain->NRes )
    return(NotValid(Chain,"suspicious coordinates, occupancy or temperature factor"));
  
  if( 100.0*(float)Chain->NonStandRes/(float)Chain->NRes > MAXNONSTAND )
    return(NotValid(Chain,"too many non-standard residues"));
  
  if( Chain->NRes < Cmd->MinLength )
    return(NotValid(Chain,"Short chain"));
  
  if( Chain->NRes > Cmd->MaxLength )
    return(NotValid(Chain,"Long chain"));
  
  if( Chain->Method == XRay && 
     (Chain->Resolution < Cmd->MinResolution || Chain->Resolution > Cmd->MaxResolution ) )
    return(NotValid(Chain,"Resolution out of range"));
  
  if( (int)strlen(Cmd->Cond) != 0 )  {
    
    if( ChInStr(Cmd->Cond,'c') ) {
      for( Res=0; Res<Chain->NRes; Res++ )
	if( FindAtom(Chain,Res,"N",&At) || 
	    FindAtom(Chain,Res,"O",&At) || 
	    FindAtom(Chain,Res,"C",&At) ) 
	  break;
      
      if( Res == Chain->NRes )
	return(NotValid(Chain,"only CA"));
    }
    
    if( Chain->Method == NMR && !ChInStr(Cmd->Cond,'n') )
      return(NotValid(Chain,"NMR chain"));
    
    if( Chain->Method == XRay && !ChInStr(Cmd->Cond,'x') )
      return(NotValid(Chain,"XRay chain"));
    
    if( Chain->Method == Model && !ChInStr(Cmd->Cond,'m') )
      return(NotValid(Chain,"Model chain"));
    
    if( Chain->Published == NO && ChInStr(Cmd->Cond,'p') )
      return(NotValid(Chain,"Not published"));
    
    if( Chain->DsspAssigned == YES && ChInStr(Cmd->Cond,'d') )
      return(NotValid(Chain,"Assigned according to DSSP"));
    
    if( ChInStr(Cmd->Cond,'a') ) {
      fprintf(stderr,
	      "WARNING: stride: CheckChain(): "
	      "Cmd->Cond == 'a': some functionality has been commented out");
      
      if( Chain->Valid && Chain->NHelix == 0 && Chain->NSheet == -1 && Chain->NTurn == 0 )
	return(NotValid(Chain,"No assignment"));

      /* Not sure what these do but eliminating them */
      /* allows removal of the Prop->PdbAsn field.   */
      /*
      if( (Content = SecStrContent(Chain,&HelAlp,&HelPI,&Hel310,&Sheet,&Turn)) < 0.4 || 
	   Content > 0.9 )
	return(NotValid(Chain,"Suspicious content"));

      SuspCnt = 0;
      for( Res=1; Res<Chain->NRes-1; Res++ ) {
	if( ( Chain->Rsd[Res]->Prop->PdbAsn != 'H' && Chain->Rsd[Res]->Prop->PdbAsn != 'T' &&
	     Chain->Rsd[Res]->Prop->Phi > -150.0 && Chain->Rsd[Res]->Prop->Phi < 0.0 && 
	     Chain->Rsd[Res]->Prop->Psi > -100.0 && Chain->Rsd[Res]->Prop->Psi < 10.0) )
	  SuspCnt++;
	
      }
      
      if( (float)SuspCnt/(float)Chain->NRes > 0.4 )
	return(NotValid(Chain,"Suspicious assignment"));
      */
      
      for( i=0; i<Chain->NHelix; i++ ) {
	if( !PdbN2SeqN(Chain,Chain->Helix[i]->PDB_ResNumb1,&Beg) ||
	   !PdbN2SeqN(Chain,Chain->Helix[i]->PDB_ResNumb2,&End) ||
	   /*	      !CheckRes(Chain->Helix[i]->PDB_ResNumb1) ||
		      !CheckRes(Chain->Helix[i]->PDB_ResNumb2) || */
	   Chain->Helix[i]->Class > 10 ||
	   Chain->Helix[i]->Class < 1  ||
	   End-Beg > 100 || End-Beg < 0 )
	  break;
	else 
	  if( Chain->Helix[i]->Class == 1 ) {
	    Bound[AsnNumb][0] = Beg;
	    Bound[AsnNumb][1] = End;
	    AsnNumb++;
	  }
      }
      if( i < Chain->NHelix )
	return(NotValid(Chain,"Erraneous helix assignment"));
      
      for( i=0; i<Chain->NSheet; i++ )
	for( j=0; j<Chain->Sheet[i]->NStrand; j++ ) {
	  if( !PdbN2SeqN(Chain,Chain->Sheet[i]->PDB_ResNumb1[j],&Beg) ||
	     !PdbN2SeqN(Chain,Chain->Sheet[i]->PDB_ResNumb2[j],&End) ||
	     /*	        !CheckRes(Chain->Sheet[i]->PDB_ResNumb1[j]) ||
			!CheckRes(Chain->Sheet[i]->PDB_ResNumb2[j]) || */
	     End-Beg > 100 || End-Beg < 0 )
	    break;
	  else
	    if( Chain->Sheet[i]->Sence[j] != 0 ) {
	      Bound[AsnNumb][0] = Beg;
	      Bound[AsnNumb][1] = End;
	      AsnNumb++;
	    }
	  if( j < Chain->Sheet[i]->NStrand )
	    break;
	}
      
      if( i < Chain->NSheet )
	return(NotValid(Chain,"Erraneous sheet assignment"));
      
      for( i=0; i<Chain->NTurn; i++ )
	if( !PdbN2SeqN(Chain,Chain->Turn[i]->PDB_ResNumb1,&Beg) ||
	   !PdbN2SeqN(Chain,Chain->Turn[i]->PDB_ResNumb2,&End) ||
	   End-Beg > 100 || End-Beg < 0 ) 
	  break;
      
      if( i < Chain->NTurn ) 
	NotValid(Chain,"Erraneous turn assignment");
      
      for( i=0; i<AsnNumb-1; i++ ) {
	for( j=i+1; j<AsnNumb; j++ ) {
	  if( Bound[i][0] == Bound[j][0] && Bound[i][1] == Bound[j][1] ) continue;
	  if( (Bound[j][0] > Bound[i][0] && Bound[j][0] < Bound[i][1]) ||
	     (Bound[j][1] > Bound[i][0] && Bound[j][1] < Bound[i][1]) ||
	     (Bound[i][0] > Bound[j][0] && Bound[i][0] < Bound[j][1]) ||
	     (Bound[i][1] > Bound[j][0] && Bound[i][1] < Bound[j][1]) )
	    break;
	}
	if( j < AsnNumb )
	  break;
      }
      
      if( i < AsnNumb-1 )
	return(NotValid(Chain,"Assignment overlap"));
    }
  }

  fprintf(stderr,"ACCEPTED %s %c %4d %7.3f\n",
	  Chain->File,Chain->Id,Chain->NRes,Chain->Resolution);
  return(SUCCESS);
}
Пример #19
0
void BetaTurn(CHAIN **Chain, int Cn)
{

  register int i;
  RESIDUE **r;
  TURN *t;
  int CA1, CA4, Tn;
  float Phi2, Phi3, Psi2, Psi3, Range1 = 30.0, Range2 = 45.0;
  char TurnType;

  for( i=0; i<Chain[Cn]->NRes-4; i++ ) {

    r = &Chain[Cn]->Rsd[i];
    
    if( r[1]->Prop->Asn == 'H' || r[2]->Prop->Asn == 'H' || 
        r[1]->Prop->Asn == 'G' || r[2]->Prop->Asn == 'G' || 
        r[1]->Prop->Asn == 'I' || r[2]->Prop->Asn == 'G' || 
       !FindAtom(Chain[Cn],i,"CA",&CA1) || !FindAtom(Chain[Cn],i+3,"CA",&CA4) ||
       Dist(r[0]->Coord[CA1],r[3]->Coord[CA4]) > 7.0 )
      continue;
    
    Phi2 = r[1]->Prop->Phi;
    Psi2 = r[1]->Prop->Psi;
    Phi3 = r[2]->Prop->Phi;
    Psi3 = r[2]->Prop->Psi;
    
    if( TurnCondition(Phi2,-60.0,Psi2,-30,Phi3,-90.0,Psi3,0,Range1,Range2) )
      TurnType = '1';
    else
    if( TurnCondition(Phi2,60.0,Psi2,30,Phi3,90.0,Psi3,0,Range1,Range2) )
      TurnType = '2';
    else
    if( TurnCondition(Phi2,-60.0,Psi2,120,Phi3,80.0,Psi3,0,Range1,Range2) )
      TurnType = '3';
    else
    if( TurnCondition(Phi2,60.0,Psi2,-120,Phi3,-80.0,Psi3,0,Range1,Range2) )
      TurnType = '4';
    else
    if( TurnCondition(Phi2,-60.0,Psi2,120,Phi3,-90.0,Psi3,0,Range1,Range2) )
      TurnType = '5';
    else
    if( TurnCondition(Phi2,-120.0,Psi2,120,Phi3,-60.0,Psi3,0,Range1,Range2) )
      TurnType = '6';
    else
    if( TurnCondition(Phi2,-60.0,Psi2,-30,Phi3,-120.0,Psi3,120,Range1,Range2) )
      TurnType = '7';
    else
      TurnType = '8';
  
    if( r[0]->Prop->Asn == 'C' ) 
      r[0]->Prop->Asn = 'T';
    
    if( r[1]->Prop->Asn == 'C' )
      r[1]->Prop->Asn = 'T';
    
    if( r[2]->Prop->Asn == 'C' )
      r[2]->Prop->Asn = 'T';
    
    if( r[3]->Prop->Asn == 'C' )
      r[3]->Prop->Asn = 'T';
    
    Tn = Chain[Cn]->NAssignedTurn;
    Chain[Cn]->AssignedTurn[Tn] = (TURN *)ckalloc(sizeof(TURN));
    t = Chain[Cn]->AssignedTurn[Tn];
    strcpy(t->Res1,r[0]->ResType);
    strcpy(t->Res2,r[3]->ResType);
    strcpy(t->PDB_ResNumb1,r[0]->PDB_ResNumb);
    strcpy(t->PDB_ResNumb2,r[3]->PDB_ResNumb);
    t->TurnType = TurnType;
    Chain[Cn]->NAssignedTurn++;

  }
}
Пример #20
0
DWORD
main(
    int argc,
    char *argv[],
    char *envp[]
    )
{
    ATOM Atom1, Atom2, Atom3;
    BOOL Atom1Found, Atom2Found, Atom3Found;
    DWORD Atom1Length, Atom2Length, Atom3Length;
    TCHAR NameBuffer[ 128 ];

    printf( "TATOM: Entering Test Program\n" );

    Atom1 = AddAtom( TEXT("Atom1") );
    Atom2 = AddAtom( TEXT("#4095") );
    Atom3 = AddAtom( (LPTSTR)0x1234 );

    printf( "AddAtom( ""Atom1"" ) == %X\n", Atom1 );
    printf( "AddAtom( ""#4095"" ) == %X\n", Atom2 );
    printf( "AddAtom( 0x1234 ) == %X\n", Atom3 );

    Atom1 = AddAtom( TEXT("Atom1") );
    Atom2 = AddAtom( TEXT("#4095") );
    Atom3 = AddAtom( (LPTSTR)0x1234 );

    printf( "AddAtom( ""Atom1"" ) == %X\n", Atom1 );
    printf( "AddAtom( ""#4095"" ) == %X\n", Atom2 );
    printf( "AddAtom( 0x1234 ) == %X\n", Atom3 );

    assert( Atom1Found = (Atom1 == FindAtom( TEXT("Atom1") )) );
    assert( Atom2Found = (Atom2 == FindAtom( TEXT("#4095") )) );
    assert( Atom3Found = (Atom3 == FindAtom( (LPTSTR)0x1234 )) );

    printf( "FindAtom( ""Atom1"" ) == %X\n", Atom1 );
    printf( "FindAtom( ""#4095"" ) == %X\n", Atom2 );
    printf( "FindAtom( 0x1234 ) == %X\n", Atom3 );

    Atom1Length = GetAtomName( Atom1, NameBuffer, sizeof( NameBuffer ));
#ifdef UNICODE
    printf( "GetAtomName( %X ) == %ws\n", Atom1, NameBuffer );
#else
    printf( "GetAtomName( %X ) == %s\n", Atom1, NameBuffer );
#endif
    Atom2Length = GetAtomName( Atom2, NameBuffer, sizeof( NameBuffer ));
#ifdef UNICODE
    printf( "GetAtomName( %X ) == %ws\n", Atom2, NameBuffer );
#else
    printf( "GetAtomName( %X ) == %s\n", Atom2, NameBuffer );
#endif
    Atom3Length = GetAtomName( Atom3, NameBuffer, sizeof( NameBuffer ));
#ifdef UNICODE
    printf( "GetAtomName( %X ) == %ws\n", Atom3, NameBuffer );
#else
    printf( "GetAtomName( %X ) == %s\n", Atom3, NameBuffer );
#endif

    printf( "DeleteAtom( %X ) == %X\n", Atom1, DeleteAtom( Atom1 ) );
    printf( "DeleteAtom( %X ) == %X\n", Atom1, DeleteAtom( Atom1 ) );
    printf( "DeleteAtom( %X ) == %X\n", Atom1, DeleteAtom( Atom1 ) );
    printf( "DeleteAtom( %X ) == %X\n", Atom1, DeleteAtom( Atom1 ) );
    printf( "DeleteAtom( %X ) == %X\n", Atom2, DeleteAtom( Atom2 ) );
    printf( "DeleteAtom( %X ) == %X\n", Atom3, DeleteAtom( Atom3 ) );

    Atom1 = GlobalAddAtom( TEXT("Atom1") );
    Atom2 = GlobalAddAtom( TEXT("#4095") );
    Atom3 = GlobalAddAtom( (LPTSTR)0x1234 );

    printf( "GlobalAddAtom( ""Atom1"" ) == %X\n", Atom1 );
    printf( "GlobalAddAtom( ""#4095"" ) == %X\n", Atom2 );
    printf( "GlobalAddAtom( 0x1234 ) == %X\n", Atom3 );

    Atom1 = GlobalAddAtom( TEXT("Atom1") );
    Atom2 = GlobalAddAtom( TEXT("#4095") );
    Atom3 = GlobalAddAtom( (LPTSTR)0x1234 );

    printf( "GlobalAddAtom( ""Atom1"" ) == %X\n", Atom1 );
    printf( "GlobalAddAtom( ""#4095"" ) == %X\n", Atom2 );
    printf( "GlobalAddAtom( 0x1234 ) == %X\n", Atom3 );

    assert( Atom1Found = (Atom1 == GlobalFindAtom( TEXT("Atom1") )) );
    assert( Atom2Found = (Atom2 == GlobalFindAtom( TEXT("#4095") )) );
    assert( Atom3Found = (Atom3 == GlobalFindAtom( (LPTSTR)0x1234 )) );

    printf( "GlobalFindAtom( ""Atom1"" ) == %X\n", Atom1 );
    printf( "GlobalFindAtom( ""#4095"" ) == %X\n", Atom2 );
    printf( "GlobalFindAtom( 0x1234 ) == %X\n", Atom3 );

    Atom1Length = GlobalGetAtomName( Atom1, NameBuffer, sizeof( NameBuffer ));
#ifdef UNICODE
    printf( "GlobalGetAtomName( %X ) == %ws\n", Atom1, NameBuffer );
#else
    printf( "GlobalGetAtomName( %X ) == %s\n", Atom1, NameBuffer );
#endif
    Atom2Length = GlobalGetAtomName( Atom2, NameBuffer, sizeof( NameBuffer ));
#ifdef UNICODE
    printf( "GlobalGetAtomName( %X ) == %ws\n", Atom2, NameBuffer );
#else
    printf( "GlobalGetAtomName( %X ) == %s\n", Atom2, NameBuffer );
#endif
    Atom3Length = GlobalGetAtomName( Atom3, NameBuffer, sizeof( NameBuffer ));
#ifdef UNICODE
    printf( "GlobalGetAtomName( %X ) == %ws\n", Atom3, NameBuffer );
#else
    printf( "GlobalGetAtomName( %X ) == %s\n", Atom3, NameBuffer );
#endif

    printf( "GlobalDeleteAtom( %X ) == %X\n", Atom1, GlobalDeleteAtom( Atom1 ) );
    printf( "GlobalDeleteAtom( %X ) == %X\n", Atom1, GlobalDeleteAtom( Atom1 ) );
    printf( "GlobalDeleteAtom( %X ) == %X\n", Atom1, GlobalDeleteAtom( Atom1 ) );
    printf( "GlobalDeleteAtom( %X ) == %X\n", Atom1, GlobalDeleteAtom( Atom1 ) );
    printf( "GlobalDeleteAtom( %X ) == %X\n", Atom2, GlobalDeleteAtom( Atom2 ) );
    printf( "GlobalDeleteAtom( %X ) == %X\n", Atom3, GlobalDeleteAtom( Atom3 ) );

    printf( "TATOM: Exiting Test Program\n" );

    return 0;
}
Пример #21
0
int ReadPDBFile(FILE * pdb, CHAIN **Chain, int *Cn, StrideCmd *Cmd)
{

  int ChainCnt, InfoCnt, i;
  enum METHOD Method = XRay;
  BOOLEAN First_ATOM, Published=YES, DsspAssigned=NO;
  float Resolution = 0.0;
  /*FILE *pdb;*/
  BUFFER Buffer;
  char *Info[MAX_INFO], PdbIdent[5];
  RESIDUE *r;
  CHAIN *c;

  *Cn= 0;
  InfoCnt = 0;
  strcpy(PdbIdent,"~~~~");

  /*
  if( !(pdb = fopen(Cmd->InputFile,"r")) )
    return(FAILURE); 
  */
     
  First_ATOM = YES;
  
  while( fgets(Buffer,BUFSZ,pdb) ) {
    
    if(!strncmp(Buffer,"HEADER",6)) {
      Info[InfoCnt] = (char *)ckalloc(BUFSZ*sizeof(char));
      strcpy(Info[InfoCnt],"HDR  ");
      strcat(Info[InfoCnt++],Buffer+10);
      strncpy(PdbIdent,Buffer+62,4);
      PdbIdent[4] = '\0';
    }
    /*
    else
    if(!strncmp(Buffer,"AUTHOR",6)) {
      Info[InfoCnt] = (char *)ckalloc(BUFSZ*sizeof(char));
      strcpy(Info[InfoCnt],"AUT  ");
      strcat(Info[InfoCnt++],Buffer+10);
    }
    else
    if(!strncmp(Buffer,"SOURCE",6)) {
      Info[InfoCnt] = (char *)ckalloc(BUFSZ*sizeof(char));
      strcpy(Info[InfoCnt],"SRC  ");
      strcat(Info[InfoCnt++],Buffer+10);
    }
    else
    if(!strncmp(Buffer,"COMPND",6)) {
      if( !Process_COMPND(Buffer,&Method) ) 
	return(FAILURE);
      else {
	Info[InfoCnt] = (char *)ckalloc(BUFSZ*sizeof(char));
	strcpy(Info[InfoCnt],"CMP  ");
	strcat(Info[InfoCnt++],Buffer+10);
      }
    }
    else if(!strncmp(Buffer,"JRNL",4) && !Process_JRNL(Buffer,&Published)) 
	return(FAILURE);
    else if(!strncmp(Buffer,"REMARK",6) && !Process_REMARK(Buffer,&Method,&Resolution,
							   &DsspAssigned)) 
      return(FAILURE);
    else if(!strncmp(Buffer,"EXPDTA",6) && !Process_EXPDTA(Buffer,&Method)) 
      return(FAILURE);
    */
    else if(!strncmp(Buffer,"MODEL",5) && !Process_MODEL(&Method)) 
      return(FAILURE);
    else if(!strncmp(Buffer,"ENDMDL",6)) {
      Process_ENDMDL(Buffer,Chain,Cn);
      break;
    }
    /*
    else if(!strncmp(Buffer,"HELIX",5) && !Process_HELIX(Buffer,Chain,Cn,Cmd)) 
      return(FAILURE);
    else if(!strncmp(Buffer,"SHEET",5) && !Process_SHEET(Buffer,Chain,Cn,Cmd)) 
      return(FAILURE);
    else if(!strncmp(Buffer,"TURN",4) && !Process_TURN(Buffer,Chain,Cn,Cmd)) 
      return(FAILURE);
    else if(!strncmp(Buffer,"SSBOND",6) && !Process_SSBOND(Buffer,Chain,Cn,Cmd)) 
      return(FAILURE);
    */
    else if(!strncmp(Buffer,"ATOM",4) && !Process_ATOM(Buffer,Chain,Cn,&First_ATOM,Cmd)) 
      return(FAILURE);
  }
  /*
  fclose(pdb);
  */

  for( ChainCnt=0; ChainCnt< *Cn; ChainCnt++ ) {
    c = Chain[ChainCnt];
    if( c->NRes != 0  && !FindAtom(c,c->NRes,"CA",&i) )
      c->NRes--;
    strcpy(c->File,Cmd->InputFile);

    strcpy(c->PdbIdent,PdbIdent);
    if( c->NRes != 0 )  c->NRes++;
    if( c->NSheet != -1 ) c->NSheet++;
    c->Resolution = Resolution;
    c->Method = Method;
    c->Published = Published;
    c->DsspAssigned = DsspAssigned;
    c->NInfo = InfoCnt;
    for(i=0; i<InfoCnt; i++) {
      c->Info[i] = (char *)ckalloc(BUFSZ*sizeof(char));
      strcpy(c->Info[i],Info[i]);
      c->Info[i][71] = '\0';
    }
    for( i=0; i<c->NRes; i++ ) {
      r = c->Rsd[i];
      r->Inv =  (INVOLVED *)ckalloc(sizeof(INVOLVED));
      r->Prop = (PROPERTY *)ckalloc(sizeof(PROPERTY));
      r->Inv->NBondDnr = 0;
      r->Inv->NBondAcc = 0;
      r->Inv->InterchainHBonds = NO;
      r->Prop->Asn     = 'C';
      /*
      r->Prop->PdbAsn  = 'C';
      r->Prop->DsspAsn = 'C';
      r->Prop->Solv    = 0.0;
      */
      r->Prop->Phi     = 360.0;
      r->Prop->Psi     = 360.0;
    }
  }
  
  for(i=0; i<InfoCnt; i++)
    free(Info[i]);
  
  return(SUCCESS);
}
Пример #22
0
void MP4File::CreateIsmaIodFromFile(
    MP4TrackId odTrackId,
    MP4TrackId sceneTrackId,
    MP4TrackId audioTrackId,
    MP4TrackId videoTrackId,
    u_int8_t** ppBytes,
    u_int64_t* pNumBytes)
{
    MP4Descriptor* pIod = new MP4IODescriptor();
    pIod->SetTag(MP4IODescrTag);
    pIod->Generate();

    MP4Atom* pIodsAtom = FindAtom("moov.iods");
    ASSERT(pIodsAtom);
    MP4DescriptorProperty* pSrcIod =
        (MP4DescriptorProperty*)pIodsAtom->GetProperty(2);

    CloneIntegerProperty(pIod, pSrcIod, "objectDescriptorId");
    CloneIntegerProperty(pIod, pSrcIod, "ODProfileLevelId");
    CloneIntegerProperty(pIod, pSrcIod, "sceneProfileLevelId");
    CloneIntegerProperty(pIod, pSrcIod, "audioProfileLevelId");
    CloneIntegerProperty(pIod, pSrcIod, "visualProfileLevelId");
    CloneIntegerProperty(pIod, pSrcIod, "graphicsProfileLevelId");

    // mutate esIds from MP4ESIDIncDescrTag to MP4ESDescrTag
    MP4DescriptorProperty* pEsProperty;
    pIod->FindProperty("esIds", (MP4Property**)&pEsProperty);
    pEsProperty->SetTags(MP4ESDescrTag);

    MP4IntegerProperty* pSetProperty;
    MP4IntegerProperty* pSceneESID;
    MP4IntegerProperty* pOdESID;

    // OD
    MP4Descriptor* pOdEsd =
        pEsProperty->AddDescriptor(MP4ESDescrTag);
    pOdEsd->Generate();

    pOdEsd->FindProperty("ESID",
                         (MP4Property**)&pOdESID);

    // we set the OD ESID to a non-zero unique value
    pOdESID->SetValue(m_odTrackId);

    pOdEsd->FindProperty("URLFlag",
                         (MP4Property**)&pSetProperty);
    pSetProperty->SetValue(1);

    u_int8_t* pBytes;
    u_int64_t numBytes;

    CreateIsmaODUpdateCommandFromFileForStream(
        audioTrackId,
        videoTrackId,
        &pBytes,
        &numBytes);

    VERBOSE_ISMA(GetVerbosity(),
                 printf("OD data =\n"); MP4HexDump(pBytes, numBytes));

    char* odCmdBase64 = MP4ToBase64(pBytes, numBytes);

    char* urlBuf = (char*)MP4Malloc(strlen(odCmdBase64) + 64);

    sprintf(urlBuf,
            "data:application/mpeg4-od-au;base64,%s",
            odCmdBase64);

    MP4StringProperty* pUrlProperty;
    pOdEsd->FindProperty("URL",
                         (MP4Property**)&pUrlProperty);
    pUrlProperty->SetValue(urlBuf);

    VERBOSE_ISMA(GetVerbosity(),
                 printf("OD data URL = \042%s\042\n", urlBuf));

    MP4Free(odCmdBase64);
    odCmdBase64 = NULL;
    MP4Free(pBytes);
    pBytes = NULL;
    MP4Free(urlBuf);
    urlBuf = NULL;

    MP4DescriptorProperty* pSrcDcd = NULL;

    // HACK temporarily point to scene decoder config
    FindProperty(MakeTrackName(odTrackId,
                               "mdia.minf.stbl.stsd.mp4s.esds.decConfigDescr"),
                 (MP4Property**)&pSrcDcd);
    ASSERT(pSrcDcd);
    MP4Property* pOrgOdEsdProperty =
        pOdEsd->GetProperty(8);
    pOdEsd->SetProperty(8, pSrcDcd);

    // bufferSizeDB needs to be set appropriately
    MP4BitfieldProperty* pBufferSizeProperty = NULL;
    pOdEsd->FindProperty("decConfigDescr.bufferSizeDB",
                         (MP4Property**)&pBufferSizeProperty);
    ASSERT(pBufferSizeProperty);
    pBufferSizeProperty->SetValue(numBytes);

    // SL config needs to change from 2 (file) to 1 (null)
    pOdEsd->FindProperty("slConfigDescr.predefined",
                         (MP4Property**)&pSetProperty);
    pSetProperty->SetValue(1);


    // Scene
    MP4Descriptor* pSceneEsd =
        pEsProperty->AddDescriptor(MP4ESDescrTag);
    pSceneEsd->Generate();

    pSceneEsd->FindProperty("ESID",
                            (MP4Property**)&pSceneESID);
    // we set the Scene ESID to a non-zero unique value
    pSceneESID->SetValue(sceneTrackId);

    pSceneEsd->FindProperty("URLFlag",
                            (MP4Property**)&pSetProperty);
    pSetProperty->SetValue(1);

    CreateIsmaSceneCommand(
        MP4_IS_VALID_TRACK_ID(audioTrackId),
        MP4_IS_VALID_TRACK_ID(videoTrackId),
        &pBytes,
        &numBytes);

    VERBOSE_ISMA(GetVerbosity(),
                 printf("Scene data =\n"); MP4HexDump(pBytes, numBytes));

    char *sceneCmdBase64 = MP4ToBase64(pBytes, numBytes);

    urlBuf = (char*)MP4Malloc(strlen(sceneCmdBase64) + 64);
    sprintf(urlBuf,
            "data:application/mpeg4-bifs-au;base64,%s",
            sceneCmdBase64);

    pSceneEsd->FindProperty("URL",
                            (MP4Property**)&pUrlProperty);
    pUrlProperty->SetValue(urlBuf);

    VERBOSE_ISMA(GetVerbosity(),
                 printf("Scene data URL = \042%s\042\n", urlBuf));

    MP4Free(sceneCmdBase64);
    sceneCmdBase64 = NULL;
    MP4Free(urlBuf);
    urlBuf = NULL;
    MP4Free(pBytes);
    pBytes = NULL;

    // HACK temporarily point to scene decoder config
    FindProperty(MakeTrackName(sceneTrackId,
                               "mdia.minf.stbl.stsd.mp4s.esds.decConfigDescr"),
                 (MP4Property**)&pSrcDcd);
    ASSERT(pSrcDcd);
    MP4Property* pOrgSceneEsdProperty =
        pSceneEsd->GetProperty(8);
    pSceneEsd->SetProperty(8, pSrcDcd);

    // bufferSizeDB needs to be set
    pBufferSizeProperty = NULL;
    pSceneEsd->FindProperty("decConfigDescr.bufferSizeDB",
                            (MP4Property**)&pBufferSizeProperty);
    ASSERT(pBufferSizeProperty);
    pBufferSizeProperty->SetValue(numBytes);

    // SL config needs to change from 2 (file) to 1 (null)
    pSceneEsd->FindProperty("slConfigDescr.predefined",
                            (MP4Property**)&pSetProperty);
    pSetProperty->SetValue(1);


    // finally get the whole thing written to a memory
    pIod->WriteToMemory(this, ppBytes, pNumBytes);


    // now carefully replace esd properties before destroying
    pOdEsd->SetProperty(8, pOrgOdEsdProperty);
    pSceneEsd->SetProperty(8, pOrgSceneEsdProperty);
    pSceneESID->SetValue(0); // restore 0 value
    pOdESID->SetValue(0);

    delete pIod;

    VERBOSE_ISMA(GetVerbosity(),
                 printf("IOD data =\n"); MP4HexDump(*ppBytes, *pNumBytes));
}