void MSA::SetClustalWWeights(const Tree &tree)
{
const unsigned uSeqCount = GetSeqCount();
const unsigned uLeafCount = tree.GetLeafCount();
WEIGHT *Weights = new WEIGHT[uSeqCount];
CalcClustalWWeights(tree, Weights);
for (unsigned n = 0; n < uLeafCount; ++n)
{
const WEIGHT w = Weights[n];
const unsigned uLeafNodeIndex = tree.LeafIndexToNodeIndex(n);
const unsigned uId = tree.GetLeafId(uLeafNodeIndex);
const unsigned uSeqIndex = GetSeqIndex(uId);
#if DEBUG
if (GetSeqName(uSeqIndex) != tree.GetLeafName(uLeafNodeIndex))
Quit("MSA::SetClustalWWeights: names don't match");
#endif
SetSeqWeight(uSeqIndex, w);
}
NormalizeWeights((WEIGHT) 1.0);
delete[] Weights;
}
void Initialize( const PEBC& eval_base, PC& initial_particle )
{
double weight_sum;
Init init( *this, eval_base, initial_particle, weight_sum );
#ifdef USING_TBB
tbb::blocked_range<int> range( 0, particle_num_, 100 );
tbb::parallel_for( range, init );
#else /* USING_TBB */
init();
#endif /* USING_TBB */
NormalizeWeights( weight_sum );
}
void UpdateParticles( const PEBC& eval_base, PC& estimated_particle )
{
double weight_sum;
Update update( *this, eval_base, weight_sum );
#ifdef USING_TBB
tbb::blocked_range<int> range( 0, static_cast<int>( update.prev_particles_.size() ), 100 );
tbb::parallel_for( range, update );
//update();
#else /* USING_TBB */
update();
#endif /* USING_TBB */
if( weight_sum > 0.0 ) {
NormalizeWeights( weight_sum );
generator_.GetWeightedMean( particles_, weights_, estimated_particle );
} else {
Initialize( eval_base, estimated_particle );
}
assert( evaluator_.Validate( estimated_particle, eval_base ) );
}
void ObjectAnimationMixer::SetTrackWeight(const System::string name, float value)
{
m_factors[name] = value;
NormalizeWeights();
}
void ObjectAnimationMixer::EnableTrack(const System::string name, bool flag)
{
m_active[name] = flag;
NormalizeWeights();
}
int MeshCompiler::Compile( const char* InFilename, const char* OutFilename, bool LongIndices )
{
m_StrippedFilename = FileUtil::StripExtensions( FileUtil::StripLeadingFolders( InFilename ) );
TiXmlDocument XMLDoc;
XMLDoc.LoadFile( InFilename );
TiXmlElement* RootElement = XMLDoc.FirstChildElement(); // "mesh"
// Sanity check
if( _stricmp( RootElement->Value(), "mesh" ) )
{
PRINTF( "Input file is not a valid XML mesh file.\n" );
return -1;
}
STATICHASH( BakeAOForDynamicMeshes );
STATICHASH( BakeAOForAnimatedMeshes );
STATICHASH( TraceTriangleBacks );
STATICHASH( DynamicAORadius );
STATICHASH( DynamicAOPushOut );
MAKEHASH( m_StrippedFilename );
ConfigManager::Load( FileStream( "tools.cfg", FileStream::EFM_Read ) );
m_BakeAOForDynamicMeshes = ConfigManager::GetArchetypeBool( sBakeAOForDynamicMeshes, ConfigManager::EmptyContext, false, sm_StrippedFilename );
m_BakeAOForAnimatedMeshes = ConfigManager::GetArchetypeBool( sBakeAOForAnimatedMeshes, ConfigManager::EmptyContext, false, sm_StrippedFilename );
m_TraceTriangleBacks = ConfigManager::GetArchetypeBool( sTraceTriangleBacks, ConfigManager::EmptyContext, false, sm_StrippedFilename );
m_AORadius = ConfigManager::GetArchetypeFloat( sDynamicAORadius, ConfigManager::EmptyContext, 0.1f, sm_StrippedFilename );
m_AOPushOut = ConfigManager::GetArchetypeFloat( sDynamicAOPushOut, ConfigManager::EmptyContext, 0.01f, sm_StrippedFilename );
m_Header.m_LongIndices = LongIndices;
// Get armature first, which will make it easier to handle bone references in verts
TiXmlElement* Arm = RootElement->FirstChildElement( "armature" );
CompileArmature( Arm );
int NumFaces = 0;
for( TiXmlElement* Face = RootElement->FirstChildElement( "face" ); Face; Face = Face->NextSiblingElement( "face" ) )
{
CompileFace( Face );
NumFaces++;
}
for( TiXmlElement* Mat = RootElement->FirstChildElement( "material" ); Mat; Mat = Mat->NextSiblingElement( "material" ) )
{
CompileMaterial( Mat );
}
m_Header.m_NumVertices = m_Positions.Size();
m_Header.m_NumIndices = m_Indices.Size();
NormalizeWeights();
CalculateAABB();
if( m_Header.m_HasUVs && m_Header.m_HasNormals )
{
m_Header.m_HasTangents = true;
}
PRINTF( "Calculating tangents...\n" );
CalculateTangents();
CalculateAmbientOcclusion();
PRINTF( "Compile successful!\n" );
PRINTF( "Imported %d faces.\n", NumFaces );
Write( FileStream( OutFilename, FileStream::EFM_Write ) );
PRINTF( "Exported %d vertices.\n", m_Header.m_NumVertices );
PRINTF( "Exported %d indices (%d triangles).\n", m_Header.m_NumIndices, m_Header.m_NumIndices / 3 );
if( m_Header.m_HasSkeleton )
{
PRINTF( "Exported %d bones.\n", m_Header.m_NumBones );
PRINTF( "Exported %d frames.\n", m_Header.m_NumFrames );
PRINTF( "Exported %d animations.\n", m_Header.m_NumAnims );
}
return 0;
}