PetscErrorCode MatView_MPIAdj_ASCII(Mat A,PetscViewer viewer)
{
Mat_MPIAdj *a = (Mat_MPIAdj*)A->data;
PetscErrorCode ierr;
PetscInt i,j,m = A->rmap->n;
const char *name;
PetscViewerFormat format;
PetscFunctionBegin;
ierr = PetscObjectGetName((PetscObject)A,&name);CHKERRQ(ierr);
ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
if (format == PETSC_VIEWER_ASCII_INFO) {
PetscFunctionReturn(0);
} else if (format == PETSC_VIEWER_ASCII_MATLAB) {
SETERRQ(PETSC_ERR_SUP,"Matlab format not supported");
} else {
ierr = PetscViewerASCIIUseTabs(viewer,PETSC_NO);CHKERRQ(ierr);
for (i=0; i<m; i++) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"row %D:",i+A->rmap->rstart);CHKERRQ(ierr);
for (j=a->i[i]; j<a->i[i+1]; j++) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," %D ",a->j[j]);CHKERRQ(ierr);
}
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr);
}
ierr = PetscViewerASCIIUseTabs(viewer,PETSC_YES);CHKERRQ(ierr);
}
ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
PetscFunctionReturn(0);
}
static PetscErrorCode SNESView_Multiblock(SNES snes, PetscViewer viewer)
{
SNES_Multiblock *mb = (SNES_Multiblock *) snes->data;
BlockDesc blocks = mb->blocks;
PetscBool iascii;
PetscErrorCode ierr;
PetscFunctionBegin;
ierr = PetscObjectTypeCompare((PetscObject) viewer, PETSCVIEWERASCII, &iascii);CHKERRQ(ierr);
if (iascii) {
ierr = PetscViewerASCIIPrintf(viewer," Multiblock with %s composition: total blocks = %D, blocksize = %D\n", PCCompositeTypes[mb->type], mb->numBlocks, mb->bs);CHKERRQ(ierr);
ierr = PetscViewerASCIIPrintf(viewer," Solver info for each split is in the following SNES objects:\n");CHKERRQ(ierr);
ierr = PetscViewerASCIIPushTab(viewer);CHKERRQ(ierr);
while (blocks) {
if (blocks->fields) {
PetscInt j;
ierr = PetscViewerASCIIPrintf(viewer, "Block %s Fields ", blocks->name);CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(viewer, PETSC_FALSE);CHKERRQ(ierr);
for (j = 0; j < blocks->nfields; ++j) {
if (j > 0) {
ierr = PetscViewerASCIIPrintf(viewer, ",");CHKERRQ(ierr);
}
ierr = PetscViewerASCIIPrintf(viewer, " %D", blocks->fields[j]);CHKERRQ(ierr);
}
ierr = PetscViewerASCIIPrintf(viewer, "\n");CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(viewer, PETSC_TRUE);CHKERRQ(ierr);
} else {
ierr = PetscViewerASCIIPrintf(viewer, "Block %s Defined by IS\n", blocks->name);CHKERRQ(ierr);
}
ierr = SNESView(blocks->snes, viewer);CHKERRQ(ierr);
blocks = blocks->next;
}
ierr = PetscViewerASCIIPopTab(viewer);CHKERRQ(ierr);
}
PetscFunctionReturn(0);
}
void PETSC_STDCALL petscviewerasciiusetabs_(PetscViewer viewer,PetscBool *flg, int *__ierr ){
*__ierr = PetscViewerASCIIUseTabs(
(PetscViewer)PetscToPointer((viewer) ),*flg);
}
PetscErrorCode PCBDDCNullSpaceAssembleCorrection(PC pc, PetscBool isdir, IS local_dofs)
{
PC_BDDC *pcbddc = (PC_BDDC*)pc->data;
PC_IS *pcis = (PC_IS*)pc->data;
Mat_IS* matis = (Mat_IS*)pc->pmat->data;
KSP local_ksp;
PC newpc;
NullSpaceCorrection_ctx shell_ctx;
Mat local_mat,local_pmat,small_mat,inv_small_mat;
Vec work1,work2;
const Vec *nullvecs;
VecScatter scatter_ctx;
IS is_aux;
MatFactorInfo matinfo;
PetscScalar *basis_mat,*Kbasis_mat,*array,*array_mat;
PetscScalar one = 1.0,zero = 0.0, m_one = -1.0;
PetscInt basis_dofs,basis_size,nnsp_size,i,k;
PetscBool nnsp_has_cnst;
PetscErrorCode ierr;
PetscFunctionBegin;
/* Infer the local solver */
ierr = ISGetSize(local_dofs,&basis_dofs);CHKERRQ(ierr);
if (isdir) {
/* Dirichlet solver */
local_ksp = pcbddc->ksp_D;
} else {
/* Neumann solver */
local_ksp = pcbddc->ksp_R;
}
ierr = KSPGetOperators(local_ksp,&local_mat,&local_pmat);CHKERRQ(ierr);
/* Get null space vecs */
ierr = MatNullSpaceGetVecs(pcbddc->NullSpace,&nnsp_has_cnst,&nnsp_size,&nullvecs);CHKERRQ(ierr);
basis_size = nnsp_size;
if (nnsp_has_cnst) {
basis_size++;
}
if (basis_dofs) {
/* Create shell ctx */
ierr = PetscNew(&shell_ctx);CHKERRQ(ierr);
/* Create work vectors in shell context */
ierr = VecCreate(PETSC_COMM_SELF,&shell_ctx->work_small_1);CHKERRQ(ierr);
ierr = VecSetSizes(shell_ctx->work_small_1,basis_size,basis_size);CHKERRQ(ierr);
ierr = VecSetType(shell_ctx->work_small_1,VECSEQ);CHKERRQ(ierr);
ierr = VecDuplicate(shell_ctx->work_small_1,&shell_ctx->work_small_2);CHKERRQ(ierr);
ierr = VecCreate(PETSC_COMM_SELF,&shell_ctx->work_full_1);CHKERRQ(ierr);
ierr = VecSetSizes(shell_ctx->work_full_1,basis_dofs,basis_dofs);CHKERRQ(ierr);
ierr = VecSetType(shell_ctx->work_full_1,VECSEQ);CHKERRQ(ierr);
ierr = VecDuplicate(shell_ctx->work_full_1,&shell_ctx->work_full_2);CHKERRQ(ierr);
/* Allocate workspace */
ierr = MatCreateSeqDense(PETSC_COMM_SELF,basis_dofs,basis_size,NULL,&shell_ctx->basis_mat );CHKERRQ(ierr);
ierr = MatCreateSeqDense(PETSC_COMM_SELF,basis_dofs,basis_size,NULL,&shell_ctx->Kbasis_mat);CHKERRQ(ierr);
ierr = MatDenseGetArray(shell_ctx->basis_mat,&basis_mat);CHKERRQ(ierr);
ierr = MatDenseGetArray(shell_ctx->Kbasis_mat,&Kbasis_mat);CHKERRQ(ierr);
/* Restrict local null space on selected dofs (Dirichlet or Neumann)
and compute matrices N and K*N */
ierr = VecDuplicate(shell_ctx->work_full_1,&work1);CHKERRQ(ierr);
ierr = VecDuplicate(shell_ctx->work_full_1,&work2);CHKERRQ(ierr);
ierr = VecScatterCreate(pcis->vec1_N,local_dofs,work1,(IS)0,&scatter_ctx);CHKERRQ(ierr);
}
for (k=0;k<nnsp_size;k++) {
ierr = VecScatterBegin(matis->rctx,nullvecs[k],pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
ierr = VecScatterEnd(matis->rctx,nullvecs[k],pcis->vec1_N,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
if (basis_dofs) {
ierr = VecPlaceArray(work1,(const PetscScalar*)&basis_mat[k*basis_dofs]);CHKERRQ(ierr);
ierr = VecScatterBegin(scatter_ctx,pcis->vec1_N,work1,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
ierr = VecScatterEnd(scatter_ctx,pcis->vec1_N,work1,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
ierr = VecPlaceArray(work2,(const PetscScalar*)&Kbasis_mat[k*basis_dofs]);CHKERRQ(ierr);
ierr = MatMult(local_mat,work1,work2);CHKERRQ(ierr);
ierr = VecResetArray(work1);CHKERRQ(ierr);
ierr = VecResetArray(work2);CHKERRQ(ierr);
}
}
if (basis_dofs) {
if (nnsp_has_cnst) {
ierr = VecPlaceArray(work1,(const PetscScalar*)&basis_mat[k*basis_dofs]);CHKERRQ(ierr);
ierr = VecSet(work1,one);CHKERRQ(ierr);
ierr = VecPlaceArray(work2,(const PetscScalar*)&Kbasis_mat[k*basis_dofs]);CHKERRQ(ierr);
ierr = MatMult(local_mat,work1,work2);CHKERRQ(ierr);
ierr = VecResetArray(work1);CHKERRQ(ierr);
ierr = VecResetArray(work2);CHKERRQ(ierr);
}
ierr = VecDestroy(&work1);CHKERRQ(ierr);
ierr = VecDestroy(&work2);CHKERRQ(ierr);
ierr = VecScatterDestroy(&scatter_ctx);CHKERRQ(ierr);
ierr = MatDenseRestoreArray(shell_ctx->basis_mat,&basis_mat);CHKERRQ(ierr);
ierr = MatDenseRestoreArray(shell_ctx->Kbasis_mat,&Kbasis_mat);CHKERRQ(ierr);
/* Assemble another Mat object in shell context */
ierr = MatTransposeMatMult(shell_ctx->basis_mat,shell_ctx->Kbasis_mat,MAT_INITIAL_MATRIX,PETSC_DEFAULT,&small_mat);CHKERRQ(ierr);
ierr = MatFactorInfoInitialize(&matinfo);CHKERRQ(ierr);
ierr = ISCreateStride(PETSC_COMM_SELF,basis_size,0,1,&is_aux);CHKERRQ(ierr);
ierr = MatLUFactor(small_mat,is_aux,is_aux,&matinfo);CHKERRQ(ierr);
ierr = ISDestroy(&is_aux);CHKERRQ(ierr);
ierr = PetscMalloc1(basis_size*basis_size,&array_mat);CHKERRQ(ierr);
for (k=0;k<basis_size;k++) {
ierr = VecSet(shell_ctx->work_small_1,zero);CHKERRQ(ierr);
ierr = VecSetValue(shell_ctx->work_small_1,k,one,INSERT_VALUES);CHKERRQ(ierr);
ierr = VecAssemblyBegin(shell_ctx->work_small_1);CHKERRQ(ierr);
ierr = VecAssemblyEnd(shell_ctx->work_small_1);CHKERRQ(ierr);
ierr = MatSolve(small_mat,shell_ctx->work_small_1,shell_ctx->work_small_2);CHKERRQ(ierr);
ierr = VecGetArrayRead(shell_ctx->work_small_2,(const PetscScalar**)&array);CHKERRQ(ierr);
for (i=0;i<basis_size;i++) {
array_mat[i*basis_size+k]=array[i];
}
ierr = VecRestoreArrayRead(shell_ctx->work_small_2,(const PetscScalar**)&array);CHKERRQ(ierr);
}
ierr = MatCreateSeqDense(PETSC_COMM_SELF,basis_size,basis_size,array_mat,&inv_small_mat);CHKERRQ(ierr);
ierr = MatMatMult(shell_ctx->basis_mat,inv_small_mat,MAT_INITIAL_MATRIX,PETSC_DEFAULT,&shell_ctx->Lbasis_mat);CHKERRQ(ierr);
ierr = PetscFree(array_mat);CHKERRQ(ierr);
ierr = MatDestroy(&inv_small_mat);CHKERRQ(ierr);
ierr = MatDestroy(&small_mat);CHKERRQ(ierr);
ierr = MatScale(shell_ctx->Kbasis_mat,m_one);CHKERRQ(ierr);
/* Rebuild local PC */
ierr = KSPGetPC(local_ksp,&shell_ctx->local_pc);CHKERRQ(ierr);
ierr = PetscObjectReference((PetscObject)shell_ctx->local_pc);CHKERRQ(ierr);
ierr = PCCreate(PETSC_COMM_SELF,&newpc);CHKERRQ(ierr);
ierr = PCSetOperators(newpc,local_mat,local_mat);CHKERRQ(ierr);
ierr = PCSetType(newpc,PCSHELL);CHKERRQ(ierr);
ierr = PCShellSetContext(newpc,shell_ctx);CHKERRQ(ierr);
ierr = PCShellSetApply(newpc,PCBDDCApplyNullSpaceCorrectionPC);CHKERRQ(ierr);
ierr = PCShellSetDestroy(newpc,PCBDDCDestroyNullSpaceCorrectionPC);CHKERRQ(ierr);
ierr = PCSetUp(newpc);CHKERRQ(ierr);
ierr = KSPSetPC(local_ksp,newpc);CHKERRQ(ierr);
ierr = PCDestroy(&newpc);CHKERRQ(ierr);
ierr = KSPSetUp(local_ksp);CHKERRQ(ierr);
}
/* test */
if (pcbddc->dbg_flag && basis_dofs) {
KSP check_ksp;
PC check_pc;
Mat test_mat;
Vec work3;
PetscReal test_err,lambda_min,lambda_max;
PetscBool setsym,issym=PETSC_FALSE;
PetscInt tabs;
ierr = PetscViewerASCIIGetTab(pcbddc->dbg_viewer,&tabs);CHKERRQ(ierr);
ierr = KSPGetPC(local_ksp,&check_pc);CHKERRQ(ierr);
ierr = VecDuplicate(shell_ctx->work_full_1,&work1);CHKERRQ(ierr);
ierr = VecDuplicate(shell_ctx->work_full_1,&work2);CHKERRQ(ierr);
ierr = VecDuplicate(shell_ctx->work_full_1,&work3);CHKERRQ(ierr);
ierr = VecSetRandom(shell_ctx->work_small_1,NULL);CHKERRQ(ierr);
ierr = MatMult(shell_ctx->basis_mat,shell_ctx->work_small_1,work1);CHKERRQ(ierr);
ierr = VecCopy(work1,work2);CHKERRQ(ierr);
ierr = MatMult(local_mat,work1,work3);CHKERRQ(ierr);
ierr = PCApply(check_pc,work3,work1);CHKERRQ(ierr);
ierr = VecAXPY(work1,m_one,work2);CHKERRQ(ierr);
ierr = VecNorm(work1,NORM_INFINITY,&test_err);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(pcbddc->dbg_viewer,"Subdomain %04d error for nullspace correction for ",PetscGlobalRank);CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(pcbddc->dbg_viewer,PETSC_FALSE);CHKERRQ(ierr);
if (isdir) {
ierr = PetscViewerASCIISynchronizedPrintf(pcbddc->dbg_viewer,"Dirichlet ");CHKERRQ(ierr);
} else {
ierr = PetscViewerASCIISynchronizedPrintf(pcbddc->dbg_viewer,"Neumann ");CHKERRQ(ierr);
}
ierr = PetscViewerASCIISynchronizedPrintf(pcbddc->dbg_viewer,"solver is :%1.14e\n",test_err);CHKERRQ(ierr);
ierr = PetscViewerASCIISetTab(pcbddc->dbg_viewer,tabs);CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(pcbddc->dbg_viewer,PETSC_TRUE);CHKERRQ(ierr);
ierr = MatTransposeMatMult(shell_ctx->Lbasis_mat,shell_ctx->Kbasis_mat,MAT_INITIAL_MATRIX,PETSC_DEFAULT,&test_mat);CHKERRQ(ierr);
ierr = MatShift(test_mat,one);CHKERRQ(ierr);
ierr = MatNorm(test_mat,NORM_INFINITY,&test_err);CHKERRQ(ierr);
ierr = MatDestroy(&test_mat);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(pcbddc->dbg_viewer,"Subdomain %04d error for nullspace matrices is :%1.14e\n",PetscGlobalRank,test_err);CHKERRQ(ierr);
/* Create ksp object suitable for extreme eigenvalues' estimation */
ierr = KSPCreate(PETSC_COMM_SELF,&check_ksp);CHKERRQ(ierr);
ierr = KSPSetErrorIfNotConverged(check_ksp,pc->erroriffailure);CHKERRQ(ierr);
ierr = KSPSetOperators(check_ksp,local_mat,local_mat);CHKERRQ(ierr);
ierr = KSPSetTolerances(check_ksp,1.e-8,1.e-8,PETSC_DEFAULT,basis_dofs);CHKERRQ(ierr);
ierr = KSPSetComputeSingularValues(check_ksp,PETSC_TRUE);CHKERRQ(ierr);
ierr = MatIsSymmetricKnown(pc->pmat,&setsym,&issym);CHKERRQ(ierr);
if (issym) {
ierr = KSPSetType(check_ksp,KSPCG);CHKERRQ(ierr);
}
ierr = KSPSetPC(check_ksp,check_pc);CHKERRQ(ierr);
ierr = KSPSetUp(check_ksp);CHKERRQ(ierr);
ierr = VecSetRandom(work1,NULL);CHKERRQ(ierr);
ierr = MatMult(local_mat,work1,work2);CHKERRQ(ierr);
ierr = KSPSolve(check_ksp,work2,work2);CHKERRQ(ierr);
ierr = VecAXPY(work2,m_one,work1);CHKERRQ(ierr);
ierr = VecNorm(work2,NORM_INFINITY,&test_err);CHKERRQ(ierr);
ierr = KSPComputeExtremeSingularValues(check_ksp,&lambda_max,&lambda_min);CHKERRQ(ierr);
ierr = KSPGetIterationNumber(check_ksp,&k);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(pcbddc->dbg_viewer,"Subdomain %04d error for adapted KSP %1.14e (it %d, eigs %1.6e %1.6e)\n",PetscGlobalRank,test_err,k,lambda_min,lambda_max);CHKERRQ(ierr);
ierr = KSPDestroy(&check_ksp);CHKERRQ(ierr);
ierr = VecDestroy(&work1);CHKERRQ(ierr);
ierr = VecDestroy(&work2);CHKERRQ(ierr);
ierr = VecDestroy(&work3);CHKERRQ(ierr);
}
/* all processes shoud call this, even the void ones */
if (pcbddc->dbg_flag) {
ierr = PetscViewerFlush(pcbddc->dbg_viewer);CHKERRQ(ierr);
}
PetscFunctionReturn(0);
}
PetscErrorCode DMView_AKKT(DM dm, PetscViewer v) {
DM_AKKT* kkt = (DM_AKKT*)(dm->data);
PetscErrorCode ierr;
PetscBool isascii;
PetscInt i, tab, vtab;
const char* name, *prefix;
PetscFunctionBegin;
ierr = PetscObjectTypeCompare((PetscObject)v, PETSCVIEWERASCII, &isascii); CHKERRQ(ierr);
if(!isascii) SETERRQ(((PetscObject)dm)->comm, PETSC_ERR_SUP, "No support for non-ASCII viewers");
ierr = PetscObjectGetTabLevel((PetscObject)dm, &tab); CHKERRQ(ierr);
ierr = PetscObjectGetName((PetscObject)dm, &name); CHKERRQ(ierr);
ierr = PetscObjectGetOptionsPrefix((PetscObject)dm, &prefix); CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(v,PETSC_TRUE); CHKERRQ(ierr);
ierr = PetscViewerASCIIGetTab(v,&vtab); CHKERRQ(ierr);
ierr = PetscViewerASCIISetTab(v,tab); CHKERRQ(ierr);
ierr = PetscViewerASCIIPrintf(v, "DM Algebraic KKT, name: %s, prefix: %s\n", ((PetscObject)dm)->name, ((PetscObject)dm)->prefix); CHKERRQ(ierr);
if(kkt->dm) {
ierr = PetscViewerASCIIPrintf(v, "DM:\n"); CHKERRQ(ierr);
ierr = PetscViewerASCIIPushTab(v); CHKERRQ(ierr);
ierr = DMView(kkt->dm,v); CHKERRQ(ierr);
ierr = PetscViewerASCIIPopTab(v); CHKERRQ(ierr);
}
if(kkt->Aff) {
ierr = PetscViewerASCIIPrintf(v, "Aff:\n"); CHKERRQ(ierr);
ierr = PetscViewerASCIIPushTab(v); CHKERRQ(ierr);
ierr = MatView(kkt->Aff,v); CHKERRQ(ierr);
ierr = PetscViewerASCIIPopTab(v); CHKERRQ(ierr);
}
if(kkt->dname) {
ierr = PetscViewerASCIIPrintf(v, "Decomposition, name %s:\n"); CHKERRQ(ierr);
}
for(i = 0; i < 2; ++i) {
const char* label;
if(i == 0) {
label = "Primal";
}
else {
label = "Dual";
}
if(kkt->names[i]) {
ierr = PetscViewerASCIIPrintf(v, "%s, name %s:\n", label, kkt->names[i]); CHKERRQ(ierr);
}
if(kkt->isf[i]){
ierr = PetscViewerASCIIPrintf(v, "%s, IS:\n",label); CHKERRQ(ierr);
ierr = PetscViewerASCIIPushTab(v); CHKERRQ(ierr);
ierr = ISView(kkt->isf[i],v); CHKERRQ(ierr);
ierr = PetscViewerASCIIPopTab(v); CHKERRQ(ierr);
}
if(kkt->dmf[i]){
ierr = PetscViewerASCIIPrintf(v, "%s, DM:\n", label); CHKERRQ(ierr);
ierr = PetscViewerASCIIPushTab(v); CHKERRQ(ierr);
ierr = DMView(kkt->dmf[i],v); CHKERRQ(ierr);
ierr = PetscViewerASCIIPopTab(v); CHKERRQ(ierr);
}
}
if(kkt->Pfc) {
ierr = PetscViewerASCIIPrintf(v, "Prolongation:\n"); CHKERRQ(ierr);
ierr = PetscViewerASCIIPushTab(v); CHKERRQ(ierr);
ierr = MatView(kkt->Pfc,v); CHKERRQ(ierr);
ierr = PetscViewerASCIIPopTab(v); CHKERRQ(ierr);
}
ierr = PetscViewerASCIISetTab(v,vtab); CHKERRQ(ierr);
PetscFunctionReturn(0);
}
PetscErrorCode PCBDDCGraphASCIIView(PCBDDCGraph graph, PetscInt verbosity_level, PetscViewer viewer)
{
PetscInt i,j,tabs;
PetscInt* queue_in_global_numbering;
PetscErrorCode ierr;
PetscFunctionBegin;
ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr);
ierr = PetscViewerASCIIGetTab(viewer,&tabs);CHKERRQ(ierr);
ierr = PetscViewerASCIIPrintf(viewer,"--------------------------------------------------\n");CHKERRQ(ierr);
ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"Local BDDC graph for subdomain %04d\n",PetscGlobalRank);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"Number of vertices %d\n",graph->nvtxs);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"Custom minimal size %d\n",graph->custom_minimal_size);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"Max count %d\n",graph->maxcount);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"Topological two dim? %d (set %d)\n",graph->twodim,graph->twodimset);CHKERRQ(ierr);
if (verbosity_level > 2) {
for (i=0;i<graph->nvtxs;i++) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"%d:\n",i);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(viewer," which_dof: %d\n",graph->which_dof[i]);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(viewer," special_dof: %d\n",graph->special_dof[i]);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(viewer," neighbours: %d\n",graph->count[i]);CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(viewer,PETSC_FALSE);CHKERRQ(ierr);
if (graph->count[i]) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," set of neighbours:");CHKERRQ(ierr);
for (j=0;j<graph->count[i];j++) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," %d",graph->neighbours_set[i][j]);CHKERRQ(ierr);
}
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr);
}
ierr = PetscViewerASCIISetTab(viewer,tabs);CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(viewer,PETSC_TRUE);CHKERRQ(ierr);
if (graph->mirrors) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," mirrors: %d\n",graph->mirrors[i]);CHKERRQ(ierr);
if (graph->mirrors[i]) {
ierr = PetscViewerASCIIUseTabs(viewer,PETSC_FALSE);CHKERRQ(ierr);
ierr = PetscViewerASCIISynchronizedPrintf(viewer," set of mirrors:");CHKERRQ(ierr);
for (j=0;j<graph->mirrors[i];j++) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," %d",graph->mirrors_set[i][j]);CHKERRQ(ierr);
}
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr);
ierr = PetscViewerASCIISetTab(viewer,tabs);CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(viewer,PETSC_TRUE);CHKERRQ(ierr);
}
}
if (verbosity_level > 3) {
if (graph->xadj) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," local adj list:");CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(viewer,PETSC_FALSE);CHKERRQ(ierr);
for (j=graph->xadj[i];j<graph->xadj[i+1];j++) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," %d",graph->adjncy[j]);CHKERRQ(ierr);
}
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr);
ierr = PetscViewerASCIISetTab(viewer,tabs);CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(viewer,PETSC_TRUE);CHKERRQ(ierr);
} else {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," no adj info\n");CHKERRQ(ierr);
}
}
if (graph->n_local_subs) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," local sub id: %d\n",graph->local_subs[i]);CHKERRQ(ierr);
}
ierr = PetscViewerASCIISynchronizedPrintf(viewer," interface subset id: %d\n",graph->subset[i]);CHKERRQ(ierr);
if (graph->subset[i] && graph->subset_ncc) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," ncc for subset: %d\n",graph->subset_ncc[graph->subset[i]-1]);CHKERRQ(ierr);
}
}
}
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"Total number of connected components %d\n",graph->ncc);CHKERRQ(ierr);
ierr = PetscMalloc1(graph->cptr[graph->ncc],&queue_in_global_numbering);CHKERRQ(ierr);
ierr = ISLocalToGlobalMappingApply(graph->l2gmap,graph->cptr[graph->ncc],graph->queue,queue_in_global_numbering);CHKERRQ(ierr);
for (i=0;i<graph->ncc;i++) {
PetscInt node_num=graph->queue[graph->cptr[i]];
PetscBool printcc = PETSC_FALSE;
ierr = PetscViewerASCIISynchronizedPrintf(viewer," cc %d (size %d, fid %d, neighs:",i,graph->cptr[i+1]-graph->cptr[i],graph->which_dof[node_num]);CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(viewer,PETSC_FALSE);CHKERRQ(ierr);
for (j=0;j<graph->count[node_num];j++) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," %d",graph->neighbours_set[node_num][j]);CHKERRQ(ierr);
}
if (verbosity_level > 1) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"):");CHKERRQ(ierr);
if (graph->twodim || graph->count[node_num] > 1 || (graph->count[node_num] == 1 && graph->special_dof[node_num] == PCBDDCGRAPH_NEUMANN_MARK)) {
printcc = PETSC_TRUE;
}
if (printcc) {
for (j=graph->cptr[i];j<graph->cptr[i+1];j++) {
ierr = PetscViewerASCIISynchronizedPrintf(viewer," %d (%d)",graph->queue[j],queue_in_global_numbering[j]);CHKERRQ(ierr);
}
}
} else {
ierr = PetscViewerASCIISynchronizedPrintf(viewer,")");CHKERRQ(ierr);
}
ierr = PetscViewerASCIISynchronizedPrintf(viewer,"\n");CHKERRQ(ierr);
ierr = PetscViewerASCIISetTab(viewer,tabs);CHKERRQ(ierr);
ierr = PetscViewerASCIIUseTabs(viewer,PETSC_TRUE);CHKERRQ(ierr);
}
ierr = PetscFree(queue_in_global_numbering);CHKERRQ(ierr);
ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
PetscFunctionReturn(0);
}
