// Static helper functions
// =============================================================================
double * Epetra_NumPyMultiVector::getArray(PyObject * pyObject)
{
// Try to build a contiguous PyArrayObject from the pyObject
if (!tmp_array)
tmp_array = (PyArrayObject *)
PyArray_ContiguousFromObject(pyObject,NPY_DOUBLE,0,0);
// If this fails, clean up and throw a PythonException
if (!tmp_array)
{
cleanup();
throw PythonException();
}
// If the contiguous PyArrayObject built successfully, make sure it has the correct
// number of dimensions
else
{
if (PyArray_NDIM(tmp_array) < 2)
{
PyObject * tuple = Py_BuildValue("(ii)",1,-1);
tmp_array = (PyArrayObject *) PyArray_Reshape(tmp_array,tuple);
Py_DECREF(tuple);
}
}
return (double *) (PyArray_DATA(tmp_array));
}
NPY_NO_EXPORT PyObject *
__New_PyArray_Std(PyArrayObject *self, int axis, int rtype, PyArrayObject *out,
int variance, int num)
{
PyObject *obj1 = NULL, *obj2 = NULL, *obj3 = NULL;
PyArrayObject *arr1 = NULL, *arr2 = NULL, *arrnew = NULL;
PyObject *ret = NULL, *newshape = NULL;
int i, n;
npy_intp val;
arrnew = (PyArrayObject *)PyArray_CheckAxis(self, &axis, 0);
if (arrnew == NULL) {
return NULL;
}
/* Compute and reshape mean */
arr1 = (PyArrayObject *)PyArray_EnsureAnyArray(
PyArray_Mean(arrnew, axis, rtype, NULL));
if (arr1 == NULL) {
Py_DECREF(arrnew);
return NULL;
}
n = PyArray_NDIM(arrnew);
newshape = PyTuple_New(n);
if (newshape == NULL) {
Py_DECREF(arr1);
Py_DECREF(arrnew);
return NULL;
}
for (i = 0; i < n; i++) {
if (i == axis) {
val = 1;
}
else {
val = PyArray_DIM(arrnew,i);
}
PyTuple_SET_ITEM(newshape, i, PyInt_FromLong((long)val));
}
arr2 = (PyArrayObject *)PyArray_Reshape(arr1, newshape);
Py_DECREF(arr1);
Py_DECREF(newshape);
if (arr2 == NULL) {
Py_DECREF(arrnew);
return NULL;
}
/* Compute x = x - mx */
arr1 = (PyArrayObject *)PyArray_EnsureAnyArray(
PyNumber_Subtract((PyObject *)arrnew, (PyObject *)arr2));
Py_DECREF(arr2);
if (arr1 == NULL) {
Py_DECREF(arrnew);
return NULL;
}
/* Compute x * x */
if (PyArray_ISCOMPLEX(arr1)) {
obj3 = PyArray_Conjugate(arr1, NULL);
}
else {
obj3 = (PyObject *)arr1;
Py_INCREF(arr1);
}
if (obj3 == NULL) {
Py_DECREF(arrnew);
return NULL;
}
arr2 = (PyArrayObject *)PyArray_EnsureAnyArray(
PyArray_GenericBinaryFunction(arr1, obj3, n_ops.multiply));
Py_DECREF(arr1);
Py_DECREF(obj3);
if (arr2 == NULL) {
Py_DECREF(arrnew);
return NULL;
}
if (PyArray_ISCOMPLEX(arr2)) {
obj3 = PyObject_GetAttrString((PyObject *)arr2, "real");
switch(rtype) {
case NPY_CDOUBLE:
rtype = NPY_DOUBLE;
break;
case NPY_CFLOAT:
rtype = NPY_FLOAT;
break;
case NPY_CLONGDOUBLE:
rtype = NPY_LONGDOUBLE;
break;
}
}
else {
obj3 = (PyObject *)arr2;
Py_INCREF(arr2);
}
if (obj3 == NULL) {
Py_DECREF(arrnew);
return NULL;
}
/* Compute add.reduce(x*x,axis) */
obj1 = PyArray_GenericReduceFunction((PyArrayObject *)obj3, n_ops.add,
axis, rtype, NULL);
Py_DECREF(obj3);
Py_DECREF(arr2);
if (obj1 == NULL) {
Py_DECREF(arrnew);
return NULL;
}
n = PyArray_DIM(arrnew,axis);
Py_DECREF(arrnew);
n = (n-num);
if (n == 0) {
n = 1;
}
obj2 = PyFloat_FromDouble(1.0/((double )n));
if (obj2 == NULL) {
Py_DECREF(obj1);
return NULL;
}
ret = PyNumber_Multiply(obj1, obj2);
Py_DECREF(obj1);
Py_DECREF(obj2);
if (!variance) {
arr1 = (PyArrayObject *)PyArray_EnsureAnyArray(ret);
/* sqrt() */
ret = PyArray_GenericUnaryFunction(arr1, n_ops.sqrt);
Py_DECREF(arr1);
}
if (ret == NULL) {
return NULL;
}
if (PyArray_CheckExact(self)) {
goto finish;
}
if (PyArray_Check(self) && Py_TYPE(self) == Py_TYPE(ret)) {
goto finish;
}
arr1 = (PyArrayObject *)PyArray_EnsureArray(ret);
if (arr1 == NULL) {
return NULL;
}
ret = PyArray_View(arr1, NULL, Py_TYPE(self));
Py_DECREF(arr1);
finish:
if (out) {
if (PyArray_AssignArray(out, (PyArrayObject *)ret,
NULL, NPY_DEFAULT_ASSIGN_CASTING) < 0) {
Py_DECREF(ret);
return NULL;
}
Py_DECREF(ret);
Py_INCREF(out);
return (PyObject *)out;
}
return ret;
}
