Пример #1
0
void bcast_ir_mtop(const t_commrec *cr,t_inputrec *inputrec,gmx_mtop_t *mtop)
{
  int i; 
  if (debug) fprintf(debug,"in bc_data\n");
  bc_inputrec(cr,inputrec);
  if (debug) fprintf(debug,"after bc_inputrec\n");
  bc_symtab(cr,&mtop->symtab);
  if (debug) fprintf(debug,"after bc_symtab\n");
  bc_string(cr,&mtop->symtab,&mtop->name);
  if (debug) fprintf(debug,"after bc_name\n");

  bc_ffparams(cr,&mtop->ffparams);

  block_bc(cr,mtop->nmoltype);
  snew_bc(cr,mtop->moltype,mtop->nmoltype);
  for(i=0; i<mtop->nmoltype; i++) {
    bc_moltype(cr,&mtop->symtab,&mtop->moltype[i]);
  }

  block_bc(cr,mtop->nmolblock);
  snew_bc(cr,mtop->molblock,mtop->nmolblock);
  for(i=0; i<mtop->nmolblock; i++) {
    bc_molblock(cr,&mtop->molblock[i]);
  }

  block_bc(cr,mtop->natoms);

  bc_atomtypes(cr,&mtop->atomtypes);

  bc_block(cr,&mtop->mols);
  bc_groups(cr,&mtop->symtab,mtop->natoms,&mtop->groups);
  bc_cmap(cr,&mtop->cmap_grid);
}
Пример #2
0
static void bc_ffparams(const t_commrec *cr, gmx_ffparams_t *ffp)
{
    block_bc(cr, ffp->ntypes);
    block_bc(cr, ffp->atnr);
    snew_bc(cr, ffp->functype, ffp->ntypes);
    snew_bc(cr, ffp->iparams, ffp->ntypes);
    nblock_bc(cr, ffp->ntypes, ffp->functype);
    nblock_bc(cr, ffp->ntypes, ffp->iparams);
    block_bc(cr, ffp->reppow);
    block_bc(cr, ffp->fudgeQQ);
    bc_cmap(cr, &ffp->cmap_grid);
}