Void CDirectModeData::reassign (UInt numMBX, UInt numMBY, Int iAuxCompCount)
{
destroyMem ();
m_uiNumMBX = numMBX;
m_uiNumMBY = numMBY;
m_uiNumMB = m_uiNumMBX * m_uiNumMBY;
m_ppmbmd = new CMBMode* [m_uiNumMB];
m_prgmv = new CMotionVector* [m_uiNumMB];
for (UInt i = 0; i < m_uiNumMB; i++) {
m_ppmbmd [i] = new CMBMode(iAuxCompCount);
m_prgmv [i] = new CMotionVector [5];
}
}
CDirectModeData::~CDirectModeData ()
{
destroyMem ();
}
int main(int argc, const char **argv) {
unsigned char *instructions;
if(argc==1) {
printf("The RNA Programming Language -- Interpreter v%s\nUsage: %s filename\n", RNA_INTERP_VERSION, argv[0]);
return EXIT_FAILURE;
}
{
BOOL failed;
char *tempStrg;
FILE *stream;
Memory *instructionHolder;
if(createMem(&instructionHolder)==NO) {
printf("Interpreter error: Cannot allocate memory to hold RNA instructions.\nTerminated.\n");
return EXIT_FAILURE;
}
if((stream=fopen(argv[1], "r"))==NULL) {
printf("Interpreter error: Cannot open RNA instruction file: %s.\nTerminated.\n", argv[1]);
destroyMem(&instructionHolder, YES);
return EXIT_FAILURE;
}
failed=NO;
if((tempStrg=(char *)malloc(sizeof(char)*512))==NULL) {
printf("Interpreter error: Cannot allocate memory to hold RNA instructions.\nTerminated.\n");
fclose(stream);
destroyMem(&instructionHolder, YES);
return EXIT_FAILURE;
}
while(feof(stream)==0) {
fread(tempStrg, sizeof(char), 512, stream);
if(appendMem(instructionHolder, tempStrg)==NO) {
failed=YES;
break;
}
}
free(tempStrg);
fclose(stream);
if(failed==YES) {
printf("Interpreter error: Cannot resize memory space used to hold RNA instructions.\nTerminated.\n");
destroyMem(&instructionHolder, YES);
return EXIT_FAILURE;
}
instructions=instructionHolder->mem;
destroyMem(&instructionHolder, NO);
}
{
// A=1 U=2 G=3 C=4
unsigned char *ptr;
Memory *memory;
if(createMem(&memory)==NO) {
printf("Interpreter error: Cannot allocate memory to hold on-execution data.\nTerminated.\n");
free(instructions);
return EXIT_FAILURE;
}
unsigned int codon=0, codonSize=100, loopActivatorIndex=0;
unsigned long loop, loopActivators[2][64], loopy, strg;
BOOL loopActivated=NO, skipUntilLoopTerminator=NO, started=NO;
for(loop=ustrlen(instructions), loopy=0; loopy<loop; ++loopy) {
{
unsigned int inst=0;
switch(instructions[loopy]) {
case 'A':
case 'a':
inst=1;
break;
case 'U':
case 'u':
inst=2;
break;
case 'G':
case 'g':
inst=3;
break;
case 'C':
case 'c':
inst=4;
break;
}
if(inst==0)
continue;
codon+=inst*codonSize;
}
if(codonSize==1) {
if(started==NO) {
if(codon==123) { // Metionine
started=YES;
strg=0;
ptr=memory->mem;
}
} else {
if(skipUntilLoopTerminator==YES && (codon==212 || codon==214))
skipUntilLoopTerminator=NO;
else {
switch(codon) {
case 211: // Termination
case 213:
case 231:
started=NO;
break;
case 233: // Tryptophan
strg=0;
break;
case 111: // Lysine
case 113:
++strg;
break;
case 112: // Asparagin
case 114:
--strg;
break;
case 341: // Alanine
case 342:
case 343:
case 344:
strg=(unsigned long)*ptr;
break;
case 141: // Threonine
case 142:
case 143:
case 144:
expandMem(memory, strg+1);
ptr=&(memory->mem[strg]);
break;
case 441: // Proline
case 442:
case 443:
case 444:
{
int temp;
scanf("%d", &temp);
*ptr=(unsigned char)(temp&0xF);
}
break;
case 421: // Leucine
case 422:
case 423:
case 424:
printf("%c", (char)(*ptr&0x7F));
break;
case 131: // Arginine
case 133:
case 431:
case 432:
case 433:
case 434:
expandMem(memory, strg+1);
*ptr+=memory->mem[strg];
break;
case 132: // Serine
case 134:
case 241:
case 242:
case 243:
case 244:
expandMem(memory, strg+1);
*ptr*=memory->mem[strg];
break;
case 411: // Glutamine
case 413:
expandMem(memory, strg+1);
*ptr-=memory->mem[strg];
break;
case 412: // Histidine
case 414:
expandMem(memory, strg+1);
*ptr/=memory->mem[strg];
break;
case 311: // Glutamic acid
case 313:
expandMem(memory, strg+1);
*ptr=(*ptr==memory->mem[strg]?1:0);
break;
case 312: // Aspartic acid
case 314:
if(*ptr==0) {
if(loopActivated==NO)
skipUntilLoopTerminator=YES;
else {
loopy=loopActivators[1][loopActivatorIndex++]-1;
loopActivated=NO;
}
} else {
loopActivated=YES;
loopActivators[0][loopActivatorIndex++]=loopy-2;
}
break;
case 212: // Tyrosine
case 214:
if(loopActivated==YES) {
loopActivators[1][--loopActivatorIndex]=loopy+1;
loopy=loopActivators[0][loopActivatorIndex]-1;
}
break;
// Other codons are no-op yet. :)
}
}
}
codon=0;
codonSize=100;
} else
codonSize/=10;
}
}
free(instructions);
return EXIT_SUCCESS;
}
