Пример #1
0
static void* gt_cds_arguments_new(void)
{
  CDSArguments *arguments = gt_calloc(1, sizeof *arguments);
  arguments->s2fi = gt_seqid2file_info_new();
  arguments->ofi = gt_outputfileinfo_new();
  return arguments;
}
Пример #2
0
static void* gt_splicesiteinfo_arguments_new(void)
{
  SpliceSiteInfoArguments *arguments = gt_calloc(1, sizeof *arguments);
  arguments->s2fi = gt_seqid2file_info_new();
  arguments->ofi = gt_outputfileinfo_new();
  return arguments;
}
Пример #3
0
static void *gt_inlineseq_add_arguments_new(void)
{
  InlineseqAddArguments *arguments = gt_calloc(1, sizeof *arguments);
  arguments->s2fi = gt_seqid2file_info_new();
  arguments->ofi = gt_output_file_info_new();
  arguments->outfp = NULL;
  return arguments;
}
Пример #4
0
static void* gt_extractfeat_arguments_new(void)
{
  GtExtractFeatArguments *arguments = gt_calloc(1, sizeof *arguments);
  arguments->type = gt_str_new();
  arguments->s2fi = gt_seqid2file_info_new();
  arguments->ofi = gt_output_file_info_new();
  return arguments;
}
Пример #5
0
static void *gt_speck_arguments_new(void)
{
  SpeccheckArguments *arguments = gt_calloc(1, sizeof *arguments);
  arguments->specfile = gt_str_new();
  arguments->s2fi = gt_seqid2file_info_new();
  arguments->ofi = gt_output_file_info_new();
  arguments->outfp = NULL;
  return arguments;
}
Пример #6
0
static void* gt_ltrdigest_arguments_new(void)
{
  GtLTRdigestOptions *arguments = gt_calloc((size_t) 1, sizeof *arguments);
  memset(arguments, 0, sizeof *arguments);
  arguments->trna_lib = gt_str_new();
  arguments->prefix = gt_str_new();
  arguments->cutoffs = gt_str_new();
  arguments->ofi = gt_output_file_info_new();
  arguments->hmm_files = gt_str_array_new();
  arguments->s2fi = gt_seqid2file_info_new();
  return arguments;
}