Пример #1
0
int main(int argc, char *argv[])
{
  FILE *parameterfile = NULL;
  int c, j, i, ix = 0, isample = 0, op_id = 0;
  char * filename = NULL;
  char datafilename[50];
  char parameterfilename[50];
  char conf_filename[50];
  char * input_filename = NULL;
  double plaquette_energy;
  struct stout_parameters params_smear;
  spinor **s, *s_;

#ifdef _KOJAK_INST
#pragma pomp inst init
#pragma pomp inst begin(main)
#endif
  

#if (defined SSE || defined SSE2 || SSE3)
  signal(SIGILL, &catch_ill_inst);
#endif

  DUM_DERI = 8;
  DUM_MATRIX = DUM_DERI + 5;
#if ((defined BGL && defined XLC) || defined _USE_TSPLITPAR)
  NO_OF_SPINORFIELDS = DUM_MATRIX + 3;
#else
  NO_OF_SPINORFIELDS = DUM_MATRIX + 3;
#endif

  verbose = 0;
  g_use_clover_flag = 0;

#ifdef MPI

#  ifdef OMP
  int mpi_thread_provided;
  MPI_Init_thread(&argc, &argv, MPI_THREAD_SERIALIZED, &mpi_thread_provided);
#  else
  MPI_Init(&argc, &argv);
#  endif

  MPI_Comm_rank(MPI_COMM_WORLD, &g_proc_id);
#else
  g_proc_id = 0;
#endif

  while ((c = getopt(argc, argv, "h?vVf:o:")) != -1) {
    switch (c) {
      case 'f':
        input_filename = calloc(200, sizeof(char));
        strcpy(input_filename, optarg);
        break;
      case 'o':
        filename = calloc(200, sizeof(char));
        strcpy(filename, optarg);
        break;
      case 'v':
        verbose = 1;
        break;
      case 'V':
        fprintf(stdout,"%s %s\n",PACKAGE_STRING,git_hash);
        exit(0);
        break;
      case 'h':
      case '?':
      default:
        usage();
        break;
    }
  }
  if (input_filename == NULL) {
    input_filename = "invert.input";
  }
  if (filename == NULL) {
    filename = "output";
  }

  /* Read the input file */
  if( (j = read_input(input_filename)) != 0) {
    fprintf(stderr, "Could not find input file: %s\nAborting...\n", input_filename);
    exit(-1);
  }

#ifdef OMP
  if(omp_num_threads > 0) 
  {
     omp_set_num_threads(omp_num_threads);
  }
  else {
    if( g_proc_id == 0 )
      printf("# No value provided for OmpNumThreads, running in single-threaded mode!\n");

    omp_num_threads = 1;
    omp_set_num_threads(omp_num_threads);
  }

  init_omp_accumulators(omp_num_threads);
#endif

  /* this DBW2 stuff is not needed for the inversion ! */
  if (g_dflgcr_flag == 1) {
    even_odd_flag = 0;
  }
  g_rgi_C1 = 0;
  if (Nsave == 0) {
    Nsave = 1;
  }

  if (g_running_phmc) {
    NO_OF_SPINORFIELDS = DUM_MATRIX + 8;
  }

  tmlqcd_mpi_init(argc, argv);

  g_dbw2rand = 0;

  /* starts the single and double precision random number */
  /* generator                                            */
  start_ranlux(rlxd_level, random_seed);

  /* we need to make sure that we don't have even_odd_flag = 1 */
  /* if any of the operators doesn't use it                    */
  /* in this way even/odd can still be used by other operators */
  for(j = 0; j < no_operators; j++) if(!operator_list[j].even_odd_flag) even_odd_flag = 0;

#ifndef MPI
  g_dbw2rand = 0;
#endif

#ifdef _GAUGE_COPY
  j = init_gauge_field(VOLUMEPLUSRAND, 1);
#else
  j = init_gauge_field(VOLUMEPLUSRAND, 0);
#endif
  if (j != 0) {
    fprintf(stderr, "Not enough memory for gauge_fields! Aborting...\n");
    exit(-1);
  }
  j = init_geometry_indices(VOLUMEPLUSRAND);
  if (j != 0) {
    fprintf(stderr, "Not enough memory for geometry indices! Aborting...\n");
    exit(-1);
  }
  if (no_monomials > 0) {
    if (even_odd_flag) {
      j = init_monomials(VOLUMEPLUSRAND / 2, even_odd_flag);
    }
    else {
      j = init_monomials(VOLUMEPLUSRAND, even_odd_flag);
    }
    if (j != 0) {
      fprintf(stderr, "Not enough memory for monomial pseudo fermion fields! Aborting...\n");
      exit(-1);
    }
  }
  if (even_odd_flag) {
    j = init_spinor_field(VOLUMEPLUSRAND / 2, NO_OF_SPINORFIELDS);
  }
  else {
    j = init_spinor_field(VOLUMEPLUSRAND, NO_OF_SPINORFIELDS);
  }
  if (j != 0) {
    fprintf(stderr, "Not enough memory for spinor fields! Aborting...\n");
    exit(-1);
  }

  if (g_running_phmc) {
    j = init_chi_spinor_field(VOLUMEPLUSRAND / 2, 20);
    if (j != 0) {
      fprintf(stderr, "Not enough memory for PHMC Chi fields! Aborting...\n");
      exit(-1);
    }
  }

  g_mu = g_mu1;
  if (g_cart_id == 0) {
    /*construct the filenames for the observables and the parameters*/
    strcpy(datafilename, filename);
    strcat(datafilename, ".data");
    strcpy(parameterfilename, filename);
    strcat(parameterfilename, ".para");

    parameterfile = fopen(parameterfilename, "w");
    write_first_messages(parameterfile, 1);
    fclose(parameterfile);
  }

  /* define the geometry */
  geometry();

  /* define the boundary conditions for the fermion fields */
  boundary(g_kappa);

  phmc_invmaxev = 1.;

  init_operators();

  /* this could be maybe moved to init_operators */
#ifdef _USE_HALFSPINOR
  j = init_dirac_halfspinor();
  if (j != 0) {
    fprintf(stderr, "Not enough memory for halffield! Aborting...\n");
    exit(-1);
  }
  if (g_sloppy_precision_flag == 1) {
    j = init_dirac_halfspinor32();
    if (j != 0)
    {
      fprintf(stderr, "Not enough memory for 32-bit halffield! Aborting...\n");
      exit(-1);
    }
  }
#  if (defined _PERSISTENT)
  if (even_odd_flag)
    init_xchange_halffield();
#  endif
#endif

  for (j = 0; j < Nmeas; j++) {
    sprintf(conf_filename, "%s.%.4d", gauge_input_filename, nstore);
    if (g_cart_id == 0) {
      printf("#\n# Trying to read gauge field from file %s in %s precision.\n",
            conf_filename, (gauge_precision_read_flag == 32 ? "single" : "double"));
      fflush(stdout);
    }
    if( (i = read_gauge_field(conf_filename)) !=0) {
      fprintf(stderr, "Error %d while reading gauge field from %s\n Aborting...\n", i, conf_filename);
      exit(-2);
    }


    if (g_cart_id == 0) {
      printf("# Finished reading gauge field.\n");
      fflush(stdout);
    }
#ifdef MPI
    xchange_gauge(g_gauge_field);
#endif

    /*compute the energy of the gauge field*/
    plaquette_energy = measure_gauge_action( (const su3**) g_gauge_field);

    if (g_cart_id == 0) {
      printf("# The computed plaquette value is %e.\n", plaquette_energy / (6.*VOLUME*g_nproc));
      fflush(stdout);
    }

    if (use_stout_flag == 1){
      params_smear.rho = stout_rho;
      params_smear.iterations = stout_no_iter;
/*       if (stout_smear((su3_tuple*)(g_gauge_field[0]), &params_smear, (su3_tuple*)(g_gauge_field[0])) != 0) */
/*         exit(1) ; */
      g_update_gauge_copy = 1;
      g_update_gauge_energy = 1;
      g_update_rectangle_energy = 1;
      plaquette_energy = measure_gauge_action( (const su3**) g_gauge_field);

      if (g_cart_id == 0) {
        printf("# The plaquette value after stouting is %e\n", plaquette_energy / (6.*VOLUME*g_nproc));
        fflush(stdout);
      }
    }

    if (reweighting_flag == 1) {
      reweighting_factor(reweighting_samples, nstore);
    }

    /* Compute minimal eigenvalues, if wanted */
    if (compute_evs != 0) {
      eigenvalues(&no_eigenvalues, 5000, eigenvalue_precision,
                  0, compute_evs, nstore, even_odd_flag);
    }
    if (phmc_compute_evs != 0) {
#ifdef MPI
      MPI_Finalize();
#endif
      return(0);
    }

    /* Compute the mode number or topological susceptibility using spectral projectors, if wanted*/

    if(compute_modenumber != 0 || compute_topsus !=0){
      
      s_ = calloc(no_sources_z2*VOLUMEPLUSRAND+1, sizeof(spinor));
      s  = calloc(no_sources_z2, sizeof(spinor*));
      if(s_ == NULL) { 
	printf("Not enough memory in %s: %d",__FILE__,__LINE__); exit(42); 
      }
      if(s == NULL) { 
	printf("Not enough memory in %s: %d",__FILE__,__LINE__); exit(42); 
      }
      
      
      for(i = 0; i < no_sources_z2; i++) {
#if (defined SSE3 || defined SSE2 || defined SSE)
        s[i] = (spinor*)(((unsigned long int)(s_)+ALIGN_BASE)&~ALIGN_BASE)+i*VOLUMEPLUSRAND;
#else
        s[i] = s_+i*VOLUMEPLUSRAND;
#endif
	
        z2_random_spinor_field(s[i], VOLUME);
	
/* 	what is this here needed for?? */
/*         spinor *aux_,*aux; */
/* #if ( defined SSE || defined SSE2 || defined SSE3 ) */
/*         aux_=calloc(VOLUMEPLUSRAND+1, sizeof(spinor)); */
/*         aux = (spinor *)(((unsigned long int)(aux_)+ALIGN_BASE)&~ALIGN_BASE); */
/* #else */
/*         aux_=calloc(VOLUMEPLUSRAND, sizeof(spinor)); */
/*         aux = aux_; */
/* #endif */
	
        if(g_proc_id == 0) {
          printf("source %d \n", i);
        }
	
        if(compute_modenumber != 0){
          mode_number(s[i], mstarsq);
        }
	
        if(compute_topsus !=0) {
          top_sus(s[i], mstarsq);
        }
      }
      free(s);
      free(s_);
    }


    /* move to operators as well */
    if (g_dflgcr_flag == 1) {
      /* set up deflation blocks */
      init_blocks(nblocks_t, nblocks_x, nblocks_y, nblocks_z);

      /* the can stay here for now, but later we probably need */
      /* something like init_dfl_solver called somewhere else  */
      /* create set of approximate lowest eigenvectors ("global deflation subspace") */

      /*       g_mu = 0.; */
      /*       boundary(0.125); */
      generate_dfl_subspace(g_N_s, VOLUME);
      /*       boundary(g_kappa); */
      /*       g_mu = g_mu1; */

      /* Compute little Dirac operators */
      /*       alt_block_compute_little_D(); */
      if (g_debug_level > 0) {
        check_projectors();
        check_local_D();
      }
      if (g_debug_level > 1) {
        check_little_D_inversion();
      }

    }
    if(SourceInfo.type == 1) {
      index_start = 0;
      index_end = 1;
    }

    g_precWS=NULL;
    if(use_preconditioning == 1){
      /* todo load fftw wisdom */
#if (defined HAVE_FFTW ) && !( defined MPI)
      loadFFTWWisdom(g_spinor_field[0],g_spinor_field[1],T,LX);
#else
      use_preconditioning=0;
#endif
    }

    if (g_cart_id == 0) {
      fprintf(stdout, "#\n"); /*Indicate starting of the operator part*/
    }
    for(op_id = 0; op_id < no_operators; op_id++) {
      boundary(operator_list[op_id].kappa);
      g_kappa = operator_list[op_id].kappa; 
      g_mu = 0.;

      if(use_preconditioning==1 && PRECWSOPERATORSELECT[operator_list[op_id].solver]!=PRECWS_NO ){
        printf("# Using preconditioning with treelevel preconditioning operator: %s \n",
              precWSOpToString(PRECWSOPERATORSELECT[operator_list[op_id].solver]));
        /* initial preconditioning workspace */
        operator_list[op_id].precWS=(spinorPrecWS*)malloc(sizeof(spinorPrecWS));
        spinorPrecWS_Init(operator_list[op_id].precWS,
                  operator_list[op_id].kappa,
                  operator_list[op_id].mu/2./operator_list[op_id].kappa,
                  -(0.5/operator_list[op_id].kappa-4.),
                  PRECWSOPERATORSELECT[operator_list[op_id].solver]);
        g_precWS = operator_list[op_id].precWS;

        if(PRECWSOPERATORSELECT[operator_list[op_id].solver] == PRECWS_D_DAGGER_D) {
          fitPrecParams(op_id);
        }
      }

      for(isample = 0; isample < no_samples; isample++) {
        for (ix = index_start; ix < index_end; ix++) {
          if (g_cart_id == 0) {
            fprintf(stdout, "#\n"); /*Indicate starting of new index*/
          }
          /* we use g_spinor_field[0-7] for sources and props for the moment */
          /* 0-3 in case of 1 flavour  */
          /* 0-7 in case of 2 flavours */
          prepare_source(nstore, isample, ix, op_id, read_source_flag, source_location);
          operator_list[op_id].inverter(op_id, index_start);
        }
      }


      if(use_preconditioning==1 && operator_list[op_id].precWS!=NULL ){
        /* free preconditioning workspace */
        spinorPrecWS_Free(operator_list[op_id].precWS);
        free(operator_list[op_id].precWS);
      }

      if(operator_list[op_id].type == OVERLAP){
        free_Dov_WS();
      }

    }
    nstore += Nsave;
  }

#ifdef MPI
  MPI_Finalize();
#endif
#ifdef OMP
  free_omp_accumulators();
#endif
  free_blocks();
  free_dfl_subspace();
  free_gauge_field();
  free_geometry_indices();
  free_spinor_field();
  free_moment_field();
  free_chi_spinor_field();
  return(0);
#ifdef _KOJAK_INST
#pragma pomp inst end(main)
#endif
}
Пример #2
0
int main(int argc,char *argv[])
{
  int j,j_max,k,k_max = 2;
  paramsXlfInfo *xlfInfo;
  int ix, n, *nn,*mm,i;
  double delta, deltamax;
  spinor rsp;
  int status = 0;
#ifdef MPI
  DUM_DERI = 6;
  DUM_SOLVER = DUM_DERI+2;
  DUM_MATRIX = DUM_SOLVER+6;
  NO_OF_SPINORFIELDS = DUM_MATRIX+2;

  MPI_Init(&argc, &argv);
#endif
  g_rgi_C1 = 1.; 
  
  /* Read the input file */
  read_input("hopping_test.input");
  
  tmlqcd_mpi_init(argc, argv);
  
  if(g_proc_id==0) {
#ifdef SSE
    printf("# The code was compiled with SSE instructions\n");
#endif
#ifdef SSE2
    printf("# The code was compiled with SSE2 instructions\n");
#endif
#ifdef SSE3
    printf("# The code was compiled with SSE3 instructions\n");
#endif
#ifdef P4
    printf("# The code was compiled for Pentium4\n");
#endif
#ifdef OPTERON
    printf("# The code was compiled for AMD Opteron\n");
#endif
#ifdef _GAUGE_COPY
    printf("# The code was compiled with -D_GAUGE_COPY\n");
#endif
#ifdef BGL
    printf("# The code was compiled for Blue Gene/L\n");
#endif
#ifdef BGP
    printf("# The code was compiled for Blue Gene/P\n");
#endif
#ifdef _USE_HALFSPINOR
    printf("# The code was compiled with -D_USE_HALFSPINOR\n");
#endif    
#ifdef _USE_SHMEM
    printf("# the code was compiled with -D_USE_SHMEM\n");
#  ifdef _PERSISTENT
    printf("# the code was compiled for persistent MPI calls (halfspinor only)\n");
#  endif
#endif
#ifdef _INDEX_INDEP_GEOM
    printf("# the code was compiled with index independent geometry\n");
#endif
#ifdef MPI
#  ifdef _NON_BLOCKING
    printf("# the code was compiled for non-blocking MPI calls (spinor and gauge)\n");
#  endif
#  ifdef _USE_TSPLITPAR
    printf("# the code was compiled with tsplit parallelization\n");
#  endif
#endif
    printf("\n");
    fflush(stdout);
  }

  
#ifdef _GAUGE_COPY
  init_gauge_field(VOLUMEPLUSRAND + g_dbw2rand, 1);
#else
  init_gauge_field(VOLUMEPLUSRAND + g_dbw2rand, 0);
#endif
  init_geometry_indices(VOLUMEPLUSRAND + g_dbw2rand);

  if(even_odd_flag) {
    j = init_spinor_field(VOLUMEPLUSRAND/2, 2*k_max+1);
  }
  else {
    j = init_spinor_field(VOLUMEPLUSRAND, 2*k_max);
  }

  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for spinor fields! Aborting...\n");
    exit(0);
  }
  j = init_moment_field(VOLUME, VOLUMEPLUSRAND);
  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for moment fields! Aborting...\n");
    exit(0);
  }
  
  if(g_proc_id == 0) {
    fprintf(stdout,"The number of processes is %d \n",g_nproc);
    printf("# The lattice size is %d x %d x %d x %d\n",
	   (int)(T*g_nproc_t), (int)(LX*g_nproc_x), (int)(LY*g_nproc_y), (int)(g_nproc_z*LZ));
    printf("# The local lattice size is %d x %d x %d x %d\n", 
	   (int)(T), (int)(LX), (int)(LY),(int) LZ);
    if(even_odd_flag) {
      printf("# testinging the even/odd preconditioned Dirac operator\n");
    }
    else {
      printf("# testinging the standard Dirac operator\n");
    }
    fflush(stdout);
  }
  
  /* define the geometry */
  geometry();
  /* define the boundary conditions for the fermion fields */
  boundary(g_kappa);

#ifdef _USE_HALFSPINOR
  j = init_dirac_halfspinor();
  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for halfspinor fields! Aborting...\n");
    exit(0);
  }
  if(g_sloppy_precision_flag == 1) {
    g_sloppy_precision = 1;
    j = init_dirac_halfspinor32();
    if ( j!= 0) {
      fprintf(stderr, "Not enough memory for 32-Bit halfspinor fields! Aborting...\n");
      exit(0);
    }
  }
#  if (defined _PERSISTENT)
  init_xchange_halffield();
#  endif
#endif  

  status = check_geometry();
  if (status != 0) {
    fprintf(stderr, "Checking of geometry failed. Unable to proceed.\nAborting....\n");
    exit(1);
  }

#if (defined MPI && !(defined _USE_SHMEM))
  check_xchange(); 
#endif

  start_ranlux(1, 123456);

  xlfInfo = construct_paramsXlfInfo(0.5, 0);

  random_gauge_field(reproduce_randomnumber_flag);
  if ( startoption == 2 ) {  /* restart */ 
    write_gauge_field(gauge_input_filename,gauge_precision_write_flag,xlfInfo);
  } else if ( startoption == 0 ) { /* cold */
    unit_g_gauge_field();
  } else if (startoption == 3 ) { /* continue */
    read_gauge_field(gauge_input_filename);
  } else if ( startoption == 1 ) { /* hot */
  }


#ifdef MPI
  /*For parallelization: exchange the gaugefield */
  xchange_gauge();
#endif

#ifdef _GAUGE_COPY
  update_backward_gauge();
#endif

  if(even_odd_flag) {
    /*initialize the pseudo-fermion fields*/
    j_max=1;
    for (k = 0; k < k_max; k++) {
      random_spinor_field(g_spinor_field[k], VOLUME/2, 0);
    }

    if (read_source_flag == 2) { /* save */
      /* even first, odd second */
      write_spinorfield_cm_single(g_spinor_field[0],g_spinor_field[1],SourceInfo.basename);  
    }	else if (read_source_flag == 1) { /* yes */
      /* even first, odd second */
      read_spinorfield_cm_single(g_spinor_field[0],g_spinor_field[1],SourceInfo.basename,-1,0); 
# if (!defined MPI)
      if (write_cp_flag == 1) {
	strcat(SourceInfo.basename,".2");
	read_spinorfield_cm_single(g_spinor_field[2],g_spinor_field[3],SourceInfo.basename,-1,0); 

	nn=(int*)calloc(VOLUME,sizeof(int));
	if((void*)nn == NULL) return(100);
	mm=(int*)calloc(VOLUME,sizeof(int));
	if((void*)mm == NULL) return(100);

	n=0;
	deltamax=0.0;
	for(ix=0;ix<VOLUME/2;ix++){
	  (rsp.s0).c0.re = (g_spinor_field[2][ix].s0).c0.re - (g_spinor_field[0][ix].s0).c0.re;
	  (rsp.s0).c0.im = (g_spinor_field[2][ix].s0).c0.im - (g_spinor_field[0][ix].s0).c0.im;
	  (rsp.s0).c1.re = (g_spinor_field[2][ix].s0).c1.re - (g_spinor_field[0][ix].s0).c1.re;
	  (rsp.s0).c1.im = (g_spinor_field[2][ix].s0).c1.im - (g_spinor_field[0][ix].s0).c1.im;
	  (rsp.s0).c2.re = (g_spinor_field[2][ix].s0).c2.re - (g_spinor_field[0][ix].s0).c2.re;
	  (rsp.s0).c2.im = (g_spinor_field[2][ix].s0).c2.im - (g_spinor_field[0][ix].s0).c2.im;
	  (rsp.s1).c0.re = (g_spinor_field[2][ix].s1).c0.re - (g_spinor_field[0][ix].s1).c0.re;
	  (rsp.s1).c0.im = (g_spinor_field[2][ix].s1).c0.im - (g_spinor_field[0][ix].s1).c0.im;
	  (rsp.s1).c1.re = (g_spinor_field[2][ix].s1).c1.re - (g_spinor_field[0][ix].s1).c1.re;
	  (rsp.s1).c1.im = (g_spinor_field[2][ix].s1).c1.im - (g_spinor_field[0][ix].s1).c1.im;
	  (rsp.s1).c2.re = (g_spinor_field[2][ix].s1).c2.re - (g_spinor_field[0][ix].s1).c2.re;
	  (rsp.s1).c2.im = (g_spinor_field[2][ix].s1).c2.im - (g_spinor_field[0][ix].s1).c2.im;
	  (rsp.s2).c0.re = (g_spinor_field[2][ix].s2).c0.re - (g_spinor_field[0][ix].s2).c0.re;
	  (rsp.s2).c0.im = (g_spinor_field[2][ix].s2).c0.im - (g_spinor_field[0][ix].s2).c0.im;
	  (rsp.s2).c1.re = (g_spinor_field[2][ix].s2).c1.re - (g_spinor_field[0][ix].s2).c1.re;
	  (rsp.s2).c1.im = (g_spinor_field[2][ix].s2).c1.im - (g_spinor_field[0][ix].s2).c1.im;
	  (rsp.s2).c2.re = (g_spinor_field[2][ix].s2).c2.re - (g_spinor_field[0][ix].s2).c2.re;
	  (rsp.s2).c2.im = (g_spinor_field[2][ix].s2).c2.im - (g_spinor_field[0][ix].s2).c2.im;
	  (rsp.s3).c0.re = (g_spinor_field[2][ix].s3).c0.re - (g_spinor_field[0][ix].s3).c0.re;
	  (rsp.s3).c0.im = (g_spinor_field[2][ix].s3).c0.im - (g_spinor_field[0][ix].s3).c0.im;
	  (rsp.s3).c1.re = (g_spinor_field[2][ix].s3).c1.re - (g_spinor_field[0][ix].s3).c1.re;
	  (rsp.s3).c1.im = (g_spinor_field[2][ix].s3).c1.im - (g_spinor_field[0][ix].s3).c1.im;
	  (rsp.s3).c2.re = (g_spinor_field[2][ix].s3).c2.re - (g_spinor_field[0][ix].s3).c2.re;
	  (rsp.s3).c2.im = (g_spinor_field[2][ix].s3).c2.im - (g_spinor_field[0][ix].s3).c2.im;
	  _spinor_norm_sq(delta,rsp);
	  if (delta > 1.0e-12) {
	    nn[n] = g_eo2lexic[ix];
	    mm[n]=ix;
	    n++;	    
	  }
	  if(delta>deltamax) deltamax=delta;
	}
	if (n>0){
	  printf("mismatch in even spincolorfield in %d points:\n",n);
	  for(i=0; i< MIN(n,1000); i++){
	    printf("%d,(%d,%d,%d,%d):%f vs. %f\n",nn[i],g_coord[nn[i]][0],g_coord[nn[i]][1],g_coord[nn[i]][2],g_coord[nn[i]][3],(g_spinor_field[2][mm[i]].s0).c0.re, (g_spinor_field[0][mm[i]].s0).c0.re);fflush(stdout);
	  }
	}
	n = 0;
	for(ix=0;ix<VOLUME/2;ix++){
	  (rsp.s0).c0.re = (g_spinor_field[3][ix].s0).c0.re - (g_spinor_field[1][ix].s0).c0.re;
	  (rsp.s0).c0.im = (g_spinor_field[3][ix].s0).c0.im - (g_spinor_field[1][ix].s0).c0.im;
	  (rsp.s0).c1.re = (g_spinor_field[3][ix].s0).c1.re - (g_spinor_field[1][ix].s0).c1.re;
	  (rsp.s0).c1.im = (g_spinor_field[3][ix].s0).c1.im - (g_spinor_field[1][ix].s0).c1.im;
	  (rsp.s0).c2.re = (g_spinor_field[3][ix].s0).c2.re - (g_spinor_field[1][ix].s0).c2.re;
	  (rsp.s0).c2.im = (g_spinor_field[3][ix].s0).c2.im - (g_spinor_field[1][ix].s0).c2.im;
	  (rsp.s1).c0.re = (g_spinor_field[3][ix].s1).c0.re - (g_spinor_field[1][ix].s1).c0.re;
	  (rsp.s1).c0.im = (g_spinor_field[3][ix].s1).c0.im - (g_spinor_field[1][ix].s1).c0.im;
	  (rsp.s1).c1.re = (g_spinor_field[3][ix].s1).c1.re - (g_spinor_field[1][ix].s1).c1.re;
	  (rsp.s1).c1.im = (g_spinor_field[3][ix].s1).c1.im - (g_spinor_field[1][ix].s1).c1.im;
	  (rsp.s1).c2.re = (g_spinor_field[3][ix].s1).c2.re - (g_spinor_field[1][ix].s1).c2.re;
	  (rsp.s1).c2.im = (g_spinor_field[3][ix].s1).c2.im - (g_spinor_field[1][ix].s1).c2.im;
	  (rsp.s2).c0.re = (g_spinor_field[3][ix].s2).c0.re - (g_spinor_field[1][ix].s2).c0.re;
	  (rsp.s2).c0.im = (g_spinor_field[3][ix].s2).c0.im - (g_spinor_field[1][ix].s2).c0.im;
	  (rsp.s2).c1.re = (g_spinor_field[3][ix].s2).c1.re - (g_spinor_field[1][ix].s2).c1.re;
	  (rsp.s2).c1.im = (g_spinor_field[3][ix].s2).c1.im - (g_spinor_field[1][ix].s2).c1.im;
	  (rsp.s2).c2.re = (g_spinor_field[3][ix].s2).c2.re - (g_spinor_field[1][ix].s2).c2.re;
	  (rsp.s2).c2.im = (g_spinor_field[3][ix].s2).c2.im - (g_spinor_field[1][ix].s2).c2.im;
	  (rsp.s3).c0.re = (g_spinor_field[3][ix].s3).c0.re - (g_spinor_field[1][ix].s3).c0.re;
	  (rsp.s3).c0.im = (g_spinor_field[3][ix].s3).c0.im - (g_spinor_field[1][ix].s3).c0.im;
	  (rsp.s3).c1.re = (g_spinor_field[3][ix].s3).c1.re - (g_spinor_field[1][ix].s3).c1.re;
	  (rsp.s3).c1.im = (g_spinor_field[3][ix].s3).c1.im - (g_spinor_field[1][ix].s3).c1.im;
	  (rsp.s3).c2.re = (g_spinor_field[3][ix].s3).c2.re - (g_spinor_field[1][ix].s3).c2.re;
	  (rsp.s3).c2.im = (g_spinor_field[3][ix].s3).c2.im - (g_spinor_field[1][ix].s3).c2.im;
	  _spinor_norm_sq(delta,rsp);
	  if (delta > 1.0e-12) {
	    nn[n]=g_eo2lexic[ix+(VOLUME+RAND)/2];
	    mm[n]=ix;
	    n++;	    
	  }
	  if(delta>deltamax) deltamax=delta;
	}
	if (n>0){
	  printf("mismatch in odd spincolorfield in %d points:\n",n);
	  for(i=0; i< MIN(n,1000); i++){
	    printf("%d,(%d,%d,%d,%d):%f vs. %f\n",nn[i],g_coord[nn[i]][0],g_coord[nn[i]][1],g_coord[nn[i]][2],g_coord[nn[i]][3],(g_spinor_field[3][mm[i]].s0).c0.re, (g_spinor_field[1][mm[i]].s0).c0.re);fflush(stdout);
	  }
	}
	printf("max delta=%e",deltamax);fflush(stdout);
      }
# endif
    }
    
    if (read_source_flag > 0 && write_cp_flag == 0) { /* read-source yes or nobutsave; checkpoint no */
      /* first spinorial arg is output, the second is input */
      Hopping_Matrix(1, g_spinor_field[1], g_spinor_field[0]);      /*ieo=1 M_{eo}*/
      Hopping_Matrix(0, g_spinor_field[0], g_spinor_field[1]);      /*ieo=0 M_{oe}*/
      strcat(SourceInfo.basename,".out");
      write_spinorfield_cm_single(g_spinor_field[0],g_spinor_field[1],SourceInfo.basename);
      printf("Check-field printed. Exiting...\n");
      fflush(stdout);
    }

#ifdef MPI
    MPI_Barrier(MPI_COMM_WORLD);
    MPI_Finalize();
#endif
  }

  free_gauge_field();
  free_geometry_indices();
  free_spinor_field();
  free_moment_field();
  return(0);
}
Пример #3
0
int main(int argc,char *argv[]) {

  FILE *parameterfile=NULL, *countfile=NULL;
  char *filename = NULL;
  char datafilename[50];
  char parameterfilename[50];
  char gauge_filename[50];
  char nstore_filename[50];
  char tmp_filename[50];
  char *input_filename = NULL;
  int status = 0, accept = 0;
  int j,ix,mu, trajectory_counter=1;
  struct timeval t1;

  /* Energy corresponding to the Gauge part */
  double plaquette_energy = 0., rectangle_energy = 0.;
  /* Acceptance rate */
  int Rate=0;
  /* Do we want to perform reversibility checks */
  /* See also return_check_flag in read_input.h */
  int return_check = 0;
  /* For getopt */
  int c;

  paramsXlfInfo *xlfInfo;

/* For online measurements */
  measurement * meas;
  int imeas;
  
#ifdef _KOJAK_INST
#pragma pomp inst init
#pragma pomp inst begin(main)
#endif

#if (defined SSE || defined SSE2 || SSE3)
  signal(SIGILL,&catch_ill_inst);
#endif

  strcpy(gauge_filename,"conf.save");
  strcpy(nstore_filename,".nstore_counter");
  strcpy(tmp_filename, ".conf.tmp");

  verbose = 1;
  g_use_clover_flag = 0;

#ifdef MPI

#  ifdef OMP
  int mpi_thread_provided;
  MPI_Init_thread(&argc, &argv, MPI_THREAD_SERIALIZED, &mpi_thread_provided);
#  else
  MPI_Init(&argc, &argv);
#  endif

  MPI_Comm_rank(MPI_COMM_WORLD, &g_proc_id);
#else
  g_proc_id = 0;
#endif


  while ((c = getopt(argc, argv, "h?vVf:o:")) != -1) {
    switch (c) {
    case 'f':
      input_filename = calloc(200, sizeof(char));
      strcpy(input_filename,optarg);
      break;
    case 'o':
      filename = calloc(200, sizeof(char));
      strcpy(filename,optarg);
      break;
    case 'v':
      verbose = 1;
      break;
    case 'V':
      fprintf(stdout,"%s %s\n",PACKAGE_STRING,git_hash);
      exit(0);
      break;
    case 'h':
    case '?':
    default:
      usage();
      break;
    }
  }
  if(input_filename == NULL){
    input_filename = "hmc.input";
  }
  if(filename == NULL){
    filename = "output";
  }

  /* Read the input file */
  if( (status = read_input(input_filename)) != 0) {
    fprintf(stderr, "Could not find input file: %s\nAborting...\n", input_filename);
    exit(-1);
  }

  /* set number of omp threads to be used */
#ifdef OMP
  if(omp_num_threads > 0) 
  {
     omp_set_num_threads(omp_num_threads);
  }
  else {
    if( g_proc_id == 0 )
      printf("# No value provided for OmpNumThreads, running in single-threaded mode!\n");

    omp_num_threads = 1;
    omp_set_num_threads(omp_num_threads);
  }

  init_omp_accumulators(omp_num_threads);
#endif

  DUM_DERI = 4;
  DUM_SOLVER = DUM_DERI+1;
  DUM_MATRIX = DUM_SOLVER+6;
  if(g_running_phmc) {
    NO_OF_SPINORFIELDS = DUM_MATRIX+8;
  }
  else {
    NO_OF_SPINORFIELDS = DUM_MATRIX+6;
  }
  DUM_BI_DERI = 6;
  DUM_BI_SOLVER = DUM_BI_DERI+7;

  DUM_BI_MATRIX = DUM_BI_SOLVER+6;
  NO_OF_BISPINORFIELDS = DUM_BI_MATRIX+6;

  tmlqcd_mpi_init(argc, argv);

  if(nstore == -1) {
    countfile = fopen(nstore_filename, "r");
    if(countfile != NULL) {
      j = fscanf(countfile, "%d %d %s\n", &nstore, &trajectory_counter, gauge_input_filename);
      if(j < 1) nstore = 0;
      if(j < 2) trajectory_counter = 0;
      fclose(countfile);
    }
    else {
      nstore = 0;
      trajectory_counter = 0;
    }
  }
  
#ifndef MPI
  g_dbw2rand = 0;
#endif
  
  
  g_mu = g_mu1;
  
#ifdef _GAUGE_COPY
  status = init_gauge_field(VOLUMEPLUSRAND + g_dbw2rand, 1);
#else
  status = init_gauge_field(VOLUMEPLUSRAND + g_dbw2rand, 0);
#endif
  if (status != 0) {
    fprintf(stderr, "Not enough memory for gauge_fields! Aborting...\n");
    exit(0);
  }
  j = init_geometry_indices(VOLUMEPLUSRAND + g_dbw2rand);
  if (j != 0) {
    fprintf(stderr, "Not enough memory for geometry_indices! Aborting...\n");
    exit(0);
  }
  if(even_odd_flag) {
    j = init_spinor_field(VOLUMEPLUSRAND/2, NO_OF_SPINORFIELDS);
  }
  else {
    j = init_spinor_field(VOLUMEPLUSRAND, NO_OF_SPINORFIELDS);
  }
  if (j != 0) {
    fprintf(stderr, "Not enough memory for spinor fields! Aborting...\n");
    exit(0);
  }
  if(even_odd_flag) {
    j = init_csg_field(VOLUMEPLUSRAND/2);
  }
  else {
    j = init_csg_field(VOLUMEPLUSRAND);
  }
  if (j != 0) {
    fprintf(stderr, "Not enough memory for csg fields! Aborting...\n");
    exit(0);
  }
  j = init_moment_field(VOLUME, VOLUMEPLUSRAND + g_dbw2rand);
  if (j != 0) {
    fprintf(stderr, "Not enough memory for moment fields! Aborting...\n");
    exit(0);
  }

  if(g_running_phmc) {
    j = init_bispinor_field(VOLUME/2, NO_OF_BISPINORFIELDS);
    if (j!= 0) {
      fprintf(stderr, "Not enough memory for bi-spinor fields! Aborting...\n");
      exit(0);
    }
  }

  /* list and initialize measurements*/
  if(g_proc_id == 0) {
    printf("\n");
    for(j = 0; j < no_measurements; j++) {
      printf("# measurement id %d, type = %d: Frequency %d\n", j, measurement_list[j].type, measurement_list[j].freq);
    }
  }
  init_measurements();

  /*construct the filenames for the observables and the parameters*/
  strcpy(datafilename,filename);  
  strcat(datafilename,".data");
  strcpy(parameterfilename,filename);  
  strcat(parameterfilename,".para");

  if(g_proc_id == 0){
    parameterfile = fopen(parameterfilename, "a");
    write_first_messages(parameterfile, "hmc", git_hash);
  }

  /* define the geometry */
  geometry();

  /* define the boundary conditions for the fermion fields */
  boundary(g_kappa);

  status = check_geometry();

  if (status != 0) {
    fprintf(stderr, "Checking of geometry failed. Unable to proceed.\nAborting....\n");
    exit(1);
  }


#ifdef _USE_HALFSPINOR
  j = init_dirac_halfspinor();
  if (j!= 0) {
    fprintf(stderr, "Not enough memory for halffield! Aborting...\n");
    exit(-1);
  }
  if(g_sloppy_precision_flag == 1) {
    init_dirac_halfspinor32();
  }
#  if (defined _PERSISTENT)
  init_xchange_halffield();
#  endif
#endif

  /* Initialise random number generator */
  start_ranlux(rlxd_level, random_seed^nstore );

  /* Set up the gauge field */
  /* continue and restart */
  if(startoption==3 || startoption == 2) {
    if(g_proc_id == 0) {
      printf("# Trying to read gauge field from file %s in %s precision.\n",
            gauge_input_filename, (gauge_precision_read_flag == 32 ? "single" : "double"));
      fflush(stdout);
    }
    if( (status = read_gauge_field(gauge_input_filename)) != 0) {
      fprintf(stderr, "Error %d while reading gauge field from %s\nAborting...\n", status, gauge_input_filename);
      exit(-2);
    }

    if (g_proc_id == 0){
      printf("# Finished reading gauge field.\n");
      fflush(stdout);
    }
  }
  else if (startoption == 1) {
    /* hot */
    random_gauge_field(reproduce_randomnumber_flag, g_gauge_field);
  }
  else if(startoption == 0) {
    /* cold */
    unit_g_gauge_field();
  }

  /*For parallelization: exchange the gaugefield */
#ifdef MPI
  xchange_gauge(g_gauge_field);
#endif

  if(even_odd_flag) {
    j = init_monomials(VOLUMEPLUSRAND/2, even_odd_flag);
  }
  else {
    j = init_monomials(VOLUMEPLUSRAND, even_odd_flag);
  }
  if (j != 0) {
    fprintf(stderr, "Not enough memory for monomial pseudo fermion fields! Aborting...\n");
    exit(0);
  }

  init_integrator();

  if(g_proc_id == 0) {
    for(j = 0; j < no_monomials; j++) {
      printf("# monomial id %d type = %d timescale %d\n", j, monomial_list[j].type, monomial_list[j].timescale);
    }
  }

  plaquette_energy = measure_gauge_action( (const su3**) g_gauge_field);
  if(g_rgi_C1 > 0. || g_rgi_C1 < 0.) {
    rectangle_energy = measure_rectangles( (const su3**) g_gauge_field);
    if(g_proc_id == 0){
      fprintf(parameterfile,"# Computed rectangle value: %14.12f.\n",rectangle_energy/(12.*VOLUME*g_nproc));
    }
  }
  //eneg = g_rgi_C0 * plaquette_energy + g_rgi_C1 * rectangle_energy;

  if(g_proc_id == 0) {
    fprintf(parameterfile,"# Computed plaquette value: %14.12f.\n", plaquette_energy/(6.*VOLUME*g_nproc));
    printf("# Computed plaquette value: %14.12f.\n", plaquette_energy/(6.*VOLUME*g_nproc));
    fclose(parameterfile);
  }

  /* set ddummy to zero */
  for(ix = 0; ix < VOLUMEPLUSRAND; ix++){
    for(mu=0; mu<4; mu++){
      ddummy[ix][mu].d1=0.;
      ddummy[ix][mu].d2=0.;
      ddummy[ix][mu].d3=0.;
      ddummy[ix][mu].d4=0.;
      ddummy[ix][mu].d5=0.;
      ddummy[ix][mu].d6=0.;
      ddummy[ix][mu].d7=0.;
      ddummy[ix][mu].d8=0.;
    }
  }

  if(g_proc_id == 0) {
    gettimeofday(&t1,NULL);
    countfile = fopen("history_hmc_tm", "a");
    fprintf(countfile, "!!! Timestamp %ld, Nsave = %d, g_mu = %e, g_mu1 = %e, g_mu_2 = %e, g_mu3 = %e, beta = %f, kappa = %f, C1 = %f, ",
            t1.tv_sec, Nsave, g_mu, g_mu1, g_mu2, g_mu3, g_beta, g_kappa, g_rgi_C1);
    for(j = 0; j < Integrator.no_timescales; j++) {
      fprintf(countfile, "n_int[%d] = %d ", j, Integrator.no_mnls_per_ts[j]);
    }
    fprintf(countfile, "\n");
    fclose(countfile);
  }


  /* Loop for measurements */
  for(j = 0; j < Nmeas; j++) {
    if(g_proc_id == 0) {
      printf("#\n# Starting trajectory no %d\n", trajectory_counter);
    }

    return_check = return_check_flag && (trajectory_counter%return_check_interval == 0);

    accept = update_tm(&plaquette_energy, &rectangle_energy, datafilename, 
		       return_check, Ntherm<trajectory_counter, trajectory_counter);
    Rate += accept;

    /* Save gauge configuration all Nsave times */
    if((Nsave !=0) && (trajectory_counter%Nsave == 0) && (trajectory_counter!=0)) {
      sprintf(gauge_filename,"conf.%.4d", nstore);
      if(g_proc_id == 0) {
        countfile = fopen("history_hmc_tm", "a");
        fprintf(countfile, "%.4d, measurement %d of %d, Nsave = %d, Plaquette = %e, trajectory nr = %d\n",
            nstore, j, Nmeas, Nsave, plaquette_energy/(6.*VOLUME*g_nproc),
            trajectory_counter);
        fclose(countfile);
      }
      nstore ++;
    }
    else {
      sprintf(gauge_filename,"conf.save");
    }
    if(((Nsave !=0) && (trajectory_counter%Nsave == 0) && (trajectory_counter!=0)) || (write_cp_flag == 1) || (j >= (Nmeas - 1))) {
      /* If a reversibility check was performed this trajectory, and the trajectory was accepted,
       * then the configuration is currently stored in .conf.tmp, written out by update_tm.
       * In that case also a readback was performed, so no need to test .conf.tmp
       * In all other cases the gauge configuration still needs to be written out here. */
      if (!(return_check && accept)) {
        xlfInfo = construct_paramsXlfInfo(plaquette_energy/(6.*VOLUME*g_nproc), trajectory_counter);
        if (g_proc_id == 0) {
          fprintf(stdout, "# Writing gauge field to %s.\n", tmp_filename);
        }
        if((status = write_gauge_field( tmp_filename, gauge_precision_write_flag, xlfInfo) != 0 )) {
          /* Writing the gauge field failed directly */
          fprintf(stderr, "Error %d while writing gauge field to %s\nAborting...\n", status, tmp_filename);
          exit(-2);
        }
        if (!g_disable_IO_checks) {
#ifdef HAVE_LIBLEMON
          /* Read gauge field back to verify the writeout */
          if (g_proc_id == 0) {
            fprintf(stdout, "# Write completed, verifying write...\n");
          }
          if( (status = read_gauge_field(tmp_filename)) != 0) {
            fprintf(stderr, "WARNING, writeout of %s returned no error, but verification discovered errors.\n", tmp_filename);
            fprintf(stderr, "Potential disk or MPI I/O error. Aborting...\n");
            exit(-3);
          }
          if (g_proc_id == 0) {
            fprintf(stdout, "# Write successfully verified.\n");
          }
#else
          if (g_proc_id == 0) {
            fprintf(stdout, "# Write completed successfully.\n");
          }
#endif
        }
        free(xlfInfo);
      }
      /* Now move .conf.tmp into place */
      if(g_proc_id == 0) {
        fprintf(stdout, "# Renaming %s to %s.\n", tmp_filename, gauge_filename);
        if (rename(tmp_filename, gauge_filename) != 0) {
          /* Errno can be inspected here for more descriptive error reporting */
          fprintf(stderr, "Error while trying to rename temporary file %s to %s. Unable to proceed.\n", tmp_filename, gauge_filename);
          exit(-2);
        }
        countfile = fopen(nstore_filename, "w");
        fprintf(countfile, "%d %d %s\n", nstore, trajectory_counter+1, gauge_filename);
        fclose(countfile);
      }
    }

    /* online measurements */
    for(imeas = 0; imeas < no_measurements; imeas++){
      meas = &measurement_list[imeas];
      if(trajectory_counter%meas->freq == 0){
        if (g_proc_id == 0) {
          fprintf(stdout, "#\n# Beginning online measurement.\n");
        }
        meas->measurefunc(trajectory_counter, imeas, even_odd_flag);
      }
    }

    if(g_proc_id == 0) {
      verbose = 1;
    }
    ix = reread_input("hmc.reread");
    if(g_proc_id == 0) {
      verbose = 0;
    }

#ifdef MPI
    MPI_Barrier(MPI_COMM_WORLD);
#endif
    if(ix == 0 && g_proc_id == 0) {
      countfile = fopen("history_hmc_tm", "a");
      fprintf(countfile, "# Changed input parameters according to hmc.reread: measurement %d of %d\n", j, Nmeas);
      fclose(countfile);
      printf("# Changed input parameters according to hmc.reread (see stdout): measurement %d of %d\n", j, Nmeas);
      remove("hmc.reread");
    }
    trajectory_counter++;
  } /* end of loop over trajectories */

  if(g_proc_id == 0 && Nmeas != 0) {
    printf("# Acceptance rate was %3.2f percent, %d out of %d trajectories accepted.\n", 100.*(double)Rate/(double)Nmeas, Rate, Nmeas);
    fflush(stdout);
    parameterfile = fopen(parameterfilename, "a");
    fprintf(parameterfile, "# Acceptance rate was %3.2f percent, %d out of %d trajectories accepted.\n", 100.*(double)Rate/(double)Nmeas, Rate, Nmeas);
    fclose(parameterfile);
  }

#ifdef MPI
  MPI_Finalize();
#endif
#ifdef OMP
  free_omp_accumulators();
#endif
  free_gauge_tmp();
  free_gauge_field();
  free_geometry_indices();
  free_spinor_field();
  free_moment_field();
  free_monomials();
  if(g_running_phmc) {
    free_bispinor_field();
    free_chi_spinor_field();
  }

  return(0);
#ifdef _KOJAK_INST
#pragma pomp inst end(main)
#endif
}
Пример #4
0
int main(int argc,char *argv[])
{
#ifdef _USE_HALFSPINOR
	#undef _USE_HALFSPINOR
	printf("# WARNING: USE_HALFSPINOR will be ignored (not supported here).\n");
#endif

	if(even_odd_flag)
	{
		even_odd_flag=0;
		printf("# WARNING: even_odd_flag will be ignored (not supported here).\n");
	}
  int j,j_max,k,k_max = 1;
#ifdef HAVE_LIBLEMON
  paramsXlfInfo *xlfInfo;
#endif
  int status = 0;

  static double t1,t2,dt,sdt,dts,qdt,sqdt;
  double antioptaway=0.0;

#ifdef MPI
  static double dt2;

  DUM_DERI = 6;
  DUM_SOLVER = DUM_DERI+2;
  DUM_MATRIX = DUM_SOLVER+6;
  NO_OF_SPINORFIELDS = DUM_MATRIX+2;

#  ifdef OMP
  int mpi_thread_provided;
  MPI_Init_thread(&argc, &argv, MPI_THREAD_SERIALIZED, &mpi_thread_provided);
#  else
  MPI_Init(&argc, &argv);
#  endif
  MPI_Comm_rank(MPI_COMM_WORLD, &g_proc_id);

#else
  g_proc_id = 0;
#endif

  g_rgi_C1 = 1.;

    /* Read the input file */
  if((status = read_input("test_Dslash.input")) != 0) {
    fprintf(stderr, "Could not find input file: test_Dslash.input\nAborting...\n");
    exit(-1);
  }

#ifdef OMP
  init_openmp();
#endif

  tmlqcd_mpi_init(argc, argv);



  if(g_proc_id==0) {
#ifdef SSE
    printf("# The code was compiled with SSE instructions\n");
#endif
#ifdef SSE2
    printf("# The code was compiled with SSE2 instructions\n");
#endif
#ifdef SSE3
    printf("# The code was compiled with SSE3 instructions\n");
#endif
#ifdef P4
    printf("# The code was compiled for Pentium4\n");
#endif
#ifdef OPTERON
    printf("# The code was compiled for AMD Opteron\n");
#endif
#ifdef _GAUGE_COPY
    printf("# The code was compiled with -D_GAUGE_COPY\n");
#endif
#ifdef BGL
    printf("# The code was compiled for Blue Gene/L\n");
#endif
#ifdef BGP
    printf("# The code was compiled for Blue Gene/P\n");
#endif
#ifdef _USE_HALFSPINOR
    printf("# The code was compiled with -D_USE_HALFSPINOR\n");
#endif
#ifdef _USE_SHMEM
    printf("# The code was compiled with -D_USE_SHMEM\n");
#  ifdef _PERSISTENT
    printf("# The code was compiled for persistent MPI calls (halfspinor only)\n");
#  endif
#endif
#ifdef MPI
#  ifdef _NON_BLOCKING
    printf("# The code was compiled for non-blocking MPI calls (spinor and gauge)\n");
#  endif
#endif
    printf("\n");
    fflush(stdout);
  }


#ifdef _GAUGE_COPY
  init_gauge_field(VOLUMEPLUSRAND + g_dbw2rand, 1);
#else
  init_gauge_field(VOLUMEPLUSRAND + g_dbw2rand, 0);
#endif
  init_geometry_indices(VOLUMEPLUSRAND + g_dbw2rand);

  if(even_odd_flag) {
    j = init_spinor_field(VOLUMEPLUSRAND/2, 2*k_max+1);
  }
  else {
    j = init_spinor_field(VOLUMEPLUSRAND, 2*k_max);
  }

  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for spinor fields! Aborting...\n");
    exit(0);
  }
  j = init_moment_field(VOLUME, VOLUMEPLUSRAND + g_dbw2rand);
  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for moment fields! Aborting...\n");
    exit(0);
  }

  if(g_proc_id == 0) {
    fprintf(stdout,"# The number of processes is %d \n",g_nproc);
    printf("# The lattice size is %d x %d x %d x %d\n",
	   (int)(T*g_nproc_t), (int)(LX*g_nproc_x), (int)(LY*g_nproc_y), (int)(g_nproc_z*LZ));
    printf("# The local lattice size is %d x %d x %d x %d\n",
	   (int)(T), (int)(LX), (int)(LY),(int) LZ);
//    if(even_odd_flag) {
//      printf("# benchmarking the even/odd preconditioned Dirac operator\n");
//    }
//    else {
//      printf("# benchmarking the standard Dirac operator\n");
//    }
    fflush(stdout);
  }

  /* define the geometry */
  geometry();
  /* define the boundary conditions for the fermion fields */
  boundary(g_kappa);

#ifdef _USE_HALFSPINOR
  j = init_dirac_halfspinor();
  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for halfspinor fields! Aborting...\n");
    exit(0);
  }
  if(g_sloppy_precision_flag == 1) {
    g_sloppy_precision = 1;
    j = init_dirac_halfspinor32();
    if ( j!= 0) {
      fprintf(stderr, "Not enough memory for 32-Bit halfspinor fields! Aborting...\n");
      exit(0);
    }
  }
#  if (defined _PERSISTENT)
  init_xchange_halffield();
#  endif
#endif

  status = check_geometry();
  if (status != 0) {
    fprintf(stderr, "Checking of geometry failed. Unable to proceed.\nAborting....\n");
    exit(1);
  }
#if (defined MPI && !(defined _USE_SHMEM))
  check_xchange();
#endif

  start_ranlux(1, 123456);
  random_gauge_field(reproduce_randomnumber_flag, g_gauge_field);

#ifdef MPI
  /*For parallelization: exchange the gaugefield */
  xchange_gauge(g_gauge_field);
#endif

	/* the non even/odd case now */
	/*initialize the pseudo-fermion fields*/
	j_max=1;
	sdt=0.;
	for (k=0;k<k_max;k++) {
	  random_spinor_field_lexic(g_spinor_field[k], reproduce_randomnumber_flag, RN_GAUSS);
	}

#ifdef MPI
      MPI_Barrier(MPI_COMM_WORLD);
#endif
      t1 = gettime();

      /* here the actual Dslash */
      D_psi(g_spinor_field[0], g_spinor_field[1]);

      t2 = gettime();
      dt=t2-t1;
#ifdef MPI
      MPI_Allreduce (&dt, &sdt, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
#else
      sdt = dt;
#endif

    if(g_proc_id==0) {
      printf("# Time for Dslash %e sec.\n", sdt);
      printf("\n");
      fflush(stdout);
    }

#ifdef HAVE_LIBLEMON
  if(g_proc_id==0) {
    printf("# Performing parallel IO test ...\n");
  }
  xlfInfo = construct_paramsXlfInfo(0.5, 0);
  write_gauge_field( "conf.test", 64, xlfInfo);
  free(xlfInfo);
  if(g_proc_id==0) {
    printf("# done ...\n");
  }
#endif


#ifdef OMP
  free_omp_accumulators();
#endif
  free_gauge_field();
  free_geometry_indices();
  free_spinor_field();
  free_moment_field();
#ifdef MPI
  MPI_Barrier(MPI_COMM_WORLD);
  MPI_Finalize();
#endif
  return(0);
}
Пример #5
0
int main(int argc,char *argv[]) {

  FILE *parameterfile=NULL;
  int c, j, is=0, ic=0;
  int x, X, y, Y, z, Z, t, tt, i, sum;
  char * filename = NULL;
  char datafilename[50];
  char parameterfilename[50];
  char conf_filename[50];
  char * input_filename = NULL;
  double plaquette_energy, nrm;
  double * norm;
  struct stout_parameters params_smear;
  
#ifdef _GAUGE_COPY
  int kb=0;
#endif
#ifdef MPI
  double atime=0., etime=0.;
#endif
#ifdef _KOJAK_INST
#pragma pomp inst init
#pragma pomp inst begin(main)
#endif

  DUM_DERI = 6;
  /* DUM_DERI + 2 is enough (not 7) */
  DUM_SOLVER = DUM_DERI+2;
  DUM_MATRIX = DUM_SOLVER+6;
  /* DUM_MATRIX + 2 is enough (not 6) */
  NO_OF_SPINORFIELDS = DUM_MATRIX+2;

  verbose = 0;
  g_use_clover_flag = 0;
  g_nr_of_psf = 1;

#ifdef MPI
  MPI_Init(&argc, &argv);
#endif

  while ((c = getopt(argc, argv, "h?f:o:")) != -1) {
    switch (c) {
    case 'f': 
      input_filename = calloc(200, sizeof(char));
      strcpy(input_filename,optarg);
      break;
    case 'o':
      filename = calloc(200, sizeof(char));
      strcpy(filename,optarg);
      break;
    case 'h':
    case '?':
    default:
      usage();
      break;
    }
  }
  if(input_filename == NULL){
    input_filename = "hmc.input";
  }
  if(filename == NULL){
    filename = "output";
  } 

  /* Read the input file */
  read_input(input_filename);
  /* here we want no even/odd preconditioning */
  even_odd_flag = 0;

  /* this DBW2 stuff is not needed for the inversion ! */
  g_rgi_C1 = 0;
  if(Nsave == 0){
    Nsave = 1;
  }
  tmlqcd_mpi_init(argc, argv);

  g_dbw2rand = 0;

#ifndef MPI
  g_dbw2rand = 0;
#endif

#ifdef _GAUGE_COPY
  j = init_gauge_field(VOLUMEPLUSRAND, 1);
#else
  j = init_gauge_field(VOLUMEPLUSRAND, 0);
#endif
  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for gauge_fields! Aborting...\n");
    exit(-1);
  }
  j = init_geometry_indices(VOLUMEPLUSRAND);
  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for geometry indices! Aborting...\n");
    exit(-1);
  }
  if(even_odd_flag) {
    j = init_spinor_field(VOLUMEPLUSRAND/2, NO_OF_SPINORFIELDS);
  }
  else {
    j = init_spinor_field(VOLUMEPLUSRAND, NO_OF_SPINORFIELDS);
  }
  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for spinor fields! Aborting...\n");
    exit(-1);
  }

  g_mu = g_mu1; 
  if(g_proc_id == 0){    
    /*construct the filenames for the observables and the parameters*/
    strcpy(datafilename,filename);  strcat(datafilename,".data");
    strcpy(parameterfilename,filename);  strcat(parameterfilename,".para");
    
    parameterfile=fopen(parameterfilename, "w");
    write_first_messages(parameterfile, 0, 1);
  }

  /* define the geometry */
  geometry();

  /* define the boundary conditions for the fermion fields */
  boundary();

#ifdef _USE_HALFSPINOR
  j = init_dirac_halfspinor();
  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for halffield! Aborting...\n");
    exit(-1);
  }
  if(g_sloppy_precision_flag == 1) {
    j = init_dirac_halfspinor32();
    if ( j!= 0) {
      fprintf(stderr, "Not enough memory for 32-Bit halffield! Aborting...\n");
      exit(-1);
    }
  }
#  if (defined _PERSISTENT)
  init_xchange_halffield();
#  endif
#endif
  norm = (double*)calloc(3.*LX/2.+T/2., sizeof(double));

  for(j=0;j<Nmeas; j++) {
    sprintf(conf_filename,"%s.%.4d", gauge_input_filename, nstore);
    if (g_proc_id == 0){
      printf("Reading Gauge field from file %s\n", conf_filename); fflush(stdout);
    }
    read_lime_gauge_field(conf_filename);
    if (g_proc_id == 0){
      printf("done!\n"); fflush(stdout);
    }
#ifdef MPI
    xchange_gauge();
#endif
#ifdef _GAUGE_COPY
    update_backward_gauge();
#endif

    /* Compute minimal eigenvalues, if wanted */
    if(compute_evs != 0) {
      eigenvalues(&no_eigenvalues, 1000, eigenvalue_precision, 0, compute_evs, nstore, even_odd_flag);
    }
    /*compute the energy of the gauge field*/
    plaquette_energy = measure_gauge_action();

    if(g_proc_id == 0) {
      printf("The plaquette value is %e\n", plaquette_energy/(6.*VOLUME*g_nproc)); fflush(stdout);
    }
    if (use_stout_flag == 1){
      params_smear.rho = stout_rho;
      params_smear.iterations = stout_no_iter;
      if (stout_smear((su3_tuple*)(g_gauge_field[0]), &params_smear, (su3_tuple*)(g_gauge_field[0])) != 0)
        exit(1) ;
      g_update_gauge_copy = 1;
      g_update_gauge_energy = 1;
      g_update_rectangle_energy = 1;
      plaquette_energy = measure_gauge_action();

      if (g_proc_id == 0) {
        printf("# The plaquette value after stouting is %e\n", plaquette_energy / (6.*VOLUME*g_nproc));
        fflush(stdout);
      }
    }

    source_spinor_field(g_spinor_field[0], g_spinor_field[1], 0, 0);
    convert_eo_to_lexic(g_spinor_field[DUM_DERI], g_spinor_field[0], g_spinor_field[1]);
    D_psi(g_spinor_field[DUM_DERI+1], g_spinor_field[DUM_DERI]);
    if(even_odd_flag) {
      i = invert_eo(g_spinor_field[2], g_spinor_field[3], g_spinor_field[0], g_spinor_field[1], 
		    solver_precision, max_solver_iterations, solver_flag, g_relative_precision_flag,
		    sub_evs_cg_flag, even_odd_flag);
      convert_eo_to_lexic(g_spinor_field[DUM_DERI+1], g_spinor_field[2], g_spinor_field[3]);
    }


    for(i = 0; i < 3*LX/2+T/2; i++){
      norm[i] = 0.;
    }
    
    for(x = 0; x < LX; x++){
      if(x > LX/2) X = LX-x;
      else X = x;
      for(y = 0; y < LY; y++){
	if(y > LY/2) Y = LY-y;
	else Y = y;
	for(z = 0; z < LZ; z++){
	  if(z > LZ/2) Z = LZ-z;
	  else Z = z;
	  for(t = 0; t < T; t++){
	    if(t > T/2) tt = T - t;
	    else tt = t;
	    sum = X + Y + Z + tt;
	    _spinor_norm_sq(nrm, g_spinor_field[DUM_DERI+1][ g_ipt[t][x][y][z] ]);
/* 	    _spinor_norm_sq(nrm, qprop[0][0][1][ g_ipt[t][x][y][z] ]); */
 	    printf("%e %e\n", g_spinor_field[DUM_DERI+1][ g_ipt[t][x][y][z] ].s0.c0.re, g_spinor_field[DUM_DERI+1][ g_ipt[t][x][y][z] ].s0.c0.im);
	    nrm = sqrt( nrm );
	    printf("%1.12e\n", nrm);
	    if(nrm > norm[sum]) norm[sum] = nrm;
	  }
	}
      }
    }
    
    for(i = 0; i < 3*L/2+T/2; i++){
      printf("%d %1.12e\n", i, norm[i]);
    }
    printf("\n");
    
    nstore+=Nsave;
  }

#ifdef MPI
  MPI_Finalize();
#endif
  free_gauge_field();
  free_geometry_indices();
  free_spinor_field();
  free_moment_field();
  return(0);
#ifdef _KOJAK_INST
#pragma pomp inst end(main)
#endif
}
int tmLQCD_invert_init(int argc, char *argv[], const int _verbose) {

  DUM_DERI = 8;
  DUM_MATRIX = DUM_DERI + 5;
  NO_OF_SPINORFIELDS = DUM_MATRIX + 3;

  // in read_input.h
  verbose = _verbose;
  g_use_clover_flag = 0;

#ifdef MPI
  MPI_Comm_rank(MPI_COMM_WORLD, &g_proc_id);
#else
  g_proc_id = 0;
#endif

  /* Read the input file */
  if( (read_input("invert.input")) != 0) {
    fprintf(stderr, "tmLQCD_init_invert: Could not find input file: invert.input\nAborting...");
  }

#ifdef OMP
  init_openmp();
#endif

  tmlqcd_mpi_init(argc, argv);
  g_dbw2rand = 0;
  for(int j = 0; j < no_operators; j++) if(!operator_list[j].even_odd_flag) even_odd_flag = 0;

#ifdef _GAUGE_COPY
  int j = init_gauge_field(VOLUMEPLUSRAND, 1);
#else
  int j = init_gauge_field(VOLUMEPLUSRAND, 0);
#endif
  if (j != 0) {
    fprintf(stderr, "tmLQCD_init_invert: Not enough memory for gauge_fields! Aborting...\n");
    return(-1);
  }
  j = init_geometry_indices(VOLUMEPLUSRAND);
  if (j != 0) {
    fprintf(stderr, "tmLQCD_init_invert: Not enough memory for geometry indices! Aborting...\n");
    return(-1);
  }
  if (even_odd_flag) {
    j = init_spinor_field(VOLUMEPLUSRAND / 2, NO_OF_SPINORFIELDS);
  }
  else {
    j = init_spinor_field(VOLUMEPLUSRAND, NO_OF_SPINORFIELDS);
  }
  if (j != 0) {
    fprintf(stderr, "tmLQCD_init_invert: Not enough memory for spinor fields! Aborting...\n");
    return(-1);
  }
  // define the geometry
  geometry();

  // initialise the operators
  init_operators();
  
#ifdef HAVE_GPU
  if(usegpu_flag){
    if(even_odd_flag){
      init_mixedsolve_eo(g_gauge_field);
    }
    else{
      init_mixedsolve(g_gauge_field);
    }
#  ifdef GPU_DOUBLE
    /*init double fields w/o momenta*/
    init_gpu_fields(0);
#  endif
#  ifdef TEMPORALGAUGE
    int retval;
    if((retval=init_temporalgauge(VOLUME, g_gauge_field)) !=0){
      if(g_proc_id == 0) printf("tmLQCD_init_invert: Error while initializing temporal gauge. Aborting...\n");   
      exit(200);
    }
#  endif
  }//usegpu_flag
#endif  


#ifdef _USE_HALFSPINOR
  j = init_dirac_halfspinor();
  if (j != 0) {
    fprintf(stderr, "tmLQCD_init_invert: Not enough memory for halffield! Aborting...\n");
    return(-1);
  }
  if (g_sloppy_precision_flag == 1) {
    j = init_dirac_halfspinor32();
    if (j != 0) {
      fprintf(stderr, "tmLQCD_init_invert: Not enough memory for 32-bit halffield! Aborting...\n");
      return(-1);
    }
  }
#  if (defined _PERSISTENT)
  if (even_odd_flag)
    init_xchange_halffield();
#  endif
#endif
  tmLQCD_invert_initialised = 1;  
  return(0);
}
Пример #7
0
int main(int argc,char *argv[])
{
  int j,j_max,k,k_max = 1;
#ifdef HAVE_LIBLEMON
  paramsXlfInfo *xlfInfo;
#endif
  int status = 0;
  
  static double t1,t2,dt,sdt,dts,qdt,sqdt;
  double antioptaway=0.0;

#ifdef MPI
  static double dt2;
  
  DUM_DERI = 6;
  DUM_SOLVER = DUM_DERI+2;
  DUM_MATRIX = DUM_SOLVER+6;
  NO_OF_SPINORFIELDS = DUM_MATRIX+2;

#  ifdef OMP
  int mpi_thread_provided;
  MPI_Init_thread(&argc, &argv, MPI_THREAD_SERIALIZED, &mpi_thread_provided);
#  else
  MPI_Init(&argc, &argv);
#  endif
  MPI_Comm_rank(MPI_COMM_WORLD, &g_proc_id);

#else
  g_proc_id = 0;
#endif

  g_rgi_C1 = 1.; 
  
    /* Read the input file */
  if((status = read_input("benchmark.input")) != 0) {
    fprintf(stderr, "Could not find input file: benchmark.input\nAborting...\n");
    exit(-1);
  }

#ifdef OMP
  if(omp_num_threads > 0) 
  {
     omp_set_num_threads(omp_num_threads);
  }
  else {
    if( g_proc_id == 0 )
      printf("# No value provided for OmpNumThreads, running in single-threaded mode!\n");

    omp_num_threads = 1;
    omp_set_num_threads(omp_num_threads);
  }

  init_omp_accumulators(omp_num_threads);
#endif

  tmlqcd_mpi_init(argc, argv);
  
  if(g_proc_id==0) {
#ifdef SSE
    printf("# The code was compiled with SSE instructions\n");
#endif
#ifdef SSE2
    printf("# The code was compiled with SSE2 instructions\n");
#endif
#ifdef SSE3
    printf("# The code was compiled with SSE3 instructions\n");
#endif
#ifdef P4
    printf("# The code was compiled for Pentium4\n");
#endif
#ifdef OPTERON
    printf("# The code was compiled for AMD Opteron\n");
#endif
#ifdef _GAUGE_COPY
    printf("# The code was compiled with -D_GAUGE_COPY\n");
#endif
#ifdef BGL
    printf("# The code was compiled for Blue Gene/L\n");
#endif
#ifdef BGP
    printf("# The code was compiled for Blue Gene/P\n");
#endif
#ifdef _USE_HALFSPINOR
    printf("# The code was compiled with -D_USE_HALFSPINOR\n");
#endif    
#ifdef _USE_SHMEM
    printf("# The code was compiled with -D_USE_SHMEM\n");
#  ifdef _PERSISTENT
    printf("# The code was compiled for persistent MPI calls (halfspinor only)\n");
#  endif
#endif
#ifdef MPI
#  ifdef _NON_BLOCKING
    printf("# The code was compiled for non-blocking MPI calls (spinor and gauge)\n");
#  endif
#endif
    printf("\n");
    fflush(stdout);
  }
  
  
#ifdef _GAUGE_COPY
  init_gauge_field(VOLUMEPLUSRAND + g_dbw2rand, 1);
#else
  init_gauge_field(VOLUMEPLUSRAND + g_dbw2rand, 0);
#endif
  init_geometry_indices(VOLUMEPLUSRAND + g_dbw2rand);

  if(even_odd_flag) {
    j = init_spinor_field(VOLUMEPLUSRAND/2, 2*k_max+1);
  }
  else {
    j = init_spinor_field(VOLUMEPLUSRAND, 2*k_max);
  }

  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for spinor fields! Aborting...\n");
    exit(0);
  }
  j = init_moment_field(VOLUME, VOLUMEPLUSRAND + g_dbw2rand);
  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for moment fields! Aborting...\n");
    exit(0);
  }
  
  if(g_proc_id == 0) {
    fprintf(stdout,"# The number of processes is %d \n",g_nproc);
    printf("# The lattice size is %d x %d x %d x %d\n",
	   (int)(T*g_nproc_t), (int)(LX*g_nproc_x), (int)(LY*g_nproc_y), (int)(g_nproc_z*LZ));
    printf("# The local lattice size is %d x %d x %d x %d\n", 
	   (int)(T), (int)(LX), (int)(LY),(int) LZ);
    if(even_odd_flag) {
      printf("# benchmarking the even/odd preconditioned Dirac operator\n");
    }
    else {
      printf("# benchmarking the standard Dirac operator\n");
    }
    fflush(stdout);
  }
  
  /* define the geometry */
  geometry();
  /* define the boundary conditions for the fermion fields */
  boundary(g_kappa);

#ifdef _USE_HALFSPINOR
  j = init_dirac_halfspinor();
  if ( j!= 0) {
    fprintf(stderr, "Not enough memory for halfspinor fields! Aborting...\n");
    exit(0);
  }
  if(g_sloppy_precision_flag == 1) {
    g_sloppy_precision = 1;
    j = init_dirac_halfspinor32();
    if ( j!= 0) {
      fprintf(stderr, "Not enough memory for 32-Bit halfspinor fields! Aborting...\n");
      exit(0);
    }
  }
#  if (defined _PERSISTENT)
  init_xchange_halffield();
#  endif
#endif  

  status = check_geometry();
  if (status != 0) {
    fprintf(stderr, "Checking of geometry failed. Unable to proceed.\nAborting....\n");
    exit(1);
  }
#if (defined MPI && !(defined _USE_SHMEM))
  check_xchange(); 
#endif

  start_ranlux(1, 123456);
  random_gauge_field(reproduce_randomnumber_flag);

#ifdef MPI
  /*For parallelization: exchange the gaugefield */
  xchange_gauge(g_gauge_field);
#endif

  if(even_odd_flag) {
    /*initialize the pseudo-fermion fields*/
    j_max=2048;
    sdt=0.;
    for (k = 0; k < k_max; k++) {
      random_spinor_field(g_spinor_field[k], VOLUME/2, 0);
    }
    
    while(sdt < 30.) {
#ifdef MPI
      MPI_Barrier(MPI_COMM_WORLD);
#endif
      t1 = gettime();
      antioptaway=0.0;
      for (j=0;j<j_max;j++) {
        for (k=0;k<k_max;k++) {
          Hopping_Matrix(0, g_spinor_field[k+k_max], g_spinor_field[k]);
          Hopping_Matrix(1, g_spinor_field[2*k_max], g_spinor_field[k+k_max]);
          antioptaway+=creal(g_spinor_field[2*k_max][0].s0.c0);
        }
      }
      t2 = gettime();
      dt = t2-t1;
#ifdef MPI
      MPI_Allreduce (&dt, &sdt, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
#else
      sdt = dt;
#endif
      qdt=dt*dt;
#ifdef MPI
      MPI_Allreduce (&qdt, &sqdt, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
#else
      sqdt = qdt;
#endif
      sdt=sdt/((double)g_nproc);
      sqdt=sqrt(sqdt/g_nproc-sdt*sdt);
      j_max*=2;
    }
    j_max=j_max/2;
    dts=dt;
    sdt=1.0e6f*sdt/((double)(k_max*j_max*(VOLUME)));
    sqdt=1.0e6f*sqdt/((double)(k_max*j_max*(VOLUME)));
    
    if(g_proc_id==0) {
      printf("# The following result is just to make sure that the calculation is not optimized away: %e\n", antioptaway);
      printf("# Total compute time %e sec, variance of the time %e sec. (%d iterations).\n", sdt, sqdt, j_max);
      printf("# Communication switched on:\n# (%d Mflops [%d bit arithmetic])\n", (int)(1608.0f/sdt),(int)sizeof(spinor)/3);
#ifdef OMP
      printf("# Mflops per OpenMP thread ~ %d\n",(int)(1608.0f/(omp_num_threads*sdt)));
#endif
      printf("\n");
      fflush(stdout);
    }
    
#ifdef MPI
    /* isolated computation */
    t1 = gettime();
    antioptaway=0.0;
    for (j=0;j<j_max;j++) {
      for (k=0;k<k_max;k++) {
        Hopping_Matrix_nocom(0, g_spinor_field[k+k_max], g_spinor_field[k]);
        Hopping_Matrix_nocom(1, g_spinor_field[2*k_max], g_spinor_field[k+k_max]);
        antioptaway += creal(g_spinor_field[2*k_max][0].s0.c0);
      }
    }
    t2 = gettime();
    dt2 = t2-t1;
    /* compute the bandwidth */
    dt=dts-dt2;
    MPI_Allreduce (&dt, &sdt, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
    sdt=sdt/((double)g_nproc);
    MPI_Allreduce (&dt2, &dt, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
    dt=dt/((double)g_nproc);
    dt=1.0e6f*dt/((double)(k_max*j_max*(VOLUME)));
    if(g_proc_id==0) {
      printf("# The following result is printed just to make sure that the calculation is not optimized away: %e\n",antioptaway);
      printf("# Communication switched off: \n# (%d Mflops [%d bit arithmetic])\n", (int)(1608.0f/dt),(int)sizeof(spinor)/3);
#ifdef OMP
      printf("# Mflops per OpenMP thread ~ %d\n",(int)(1608.0f/(omp_num_threads*dt)));
#endif
      printf("\n"); 
      fflush(stdout);
    }
    sdt=sdt/((double)k_max);
    sdt=sdt/((double)j_max);
    sdt=sdt/((double)(2*SLICE));
    if(g_proc_id==0) {
      printf("# The size of the package is %d bytes.\n",(SLICE)*192);
#ifdef _USE_HALFSPINOR
      printf("# The bandwidth is %5.2f + %5.2f MB/sec\n", 192./sdt/1024/1024, 192./sdt/1024./1024);
#else
      printf("# The bandwidth is %5.2f + %5.2f MB/sec\n", 2.*192./sdt/1024/1024, 2.*192./sdt/1024./1024);
#endif
    }
#endif
    fflush(stdout);
  }
  else {
    /* the non even/odd case now */
    /*initialize the pseudo-fermion fields*/
    j_max=1;
    sdt=0.;
    for (k=0;k<k_max;k++) {
      random_spinor_field(g_spinor_field[k], VOLUME, 0);
    }
    
    while(sdt < 3.) {
#ifdef MPI
      MPI_Barrier(MPI_COMM_WORLD);
#endif
      t1 = gettime();
      for (j=0;j<j_max;j++) {
        for (k=0;k<k_max;k++) {
          D_psi(g_spinor_field[k+k_max], g_spinor_field[k]);
          antioptaway+=creal(g_spinor_field[k+k_max][0].s0.c0);
        }
      }
      t2 = gettime();
      dt=t2-t1;
#ifdef MPI
      MPI_Allreduce (&dt, &sdt, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
#else
      sdt = dt;
#endif
      qdt=dt*dt;
#ifdef MPI
      MPI_Allreduce (&qdt, &sqdt, 1, MPI_DOUBLE, MPI_SUM, MPI_COMM_WORLD);
#else
      sqdt = qdt;
#endif
      sdt=sdt/((double)g_nproc);
      sqdt=sqrt(sqdt/g_nproc-sdt*sdt);
      j_max*=2;
    }
    j_max=j_max/2;
    dts=dt;
    sdt=1.0e6f*sdt/((double)(k_max*j_max*(VOLUME)));
    sqdt=1.0e6f*sqdt/((double)(k_max*j_max*(VOLUME)));

    if(g_proc_id==0) {
      printf("# The following result is just to make sure that the calculation is not optimized away: %e\n", antioptaway);
      printf("# Total compute time %e sec, variance of the time %e sec. (%d iterations).\n", sdt, sqdt, j_max);
      printf("\n# (%d Mflops [%d bit arithmetic])\n", (int)(1680.0f/sdt),(int)sizeof(spinor)/3);
#ifdef OMP
      printf("# Mflops per OpenMP thread ~ %d\n",(int)(1680.0f/(omp_num_threads*sdt)));
#endif
      printf("\n"); 
      fflush(stdout);
    }
  }
#ifdef HAVE_LIBLEMON
  if(g_proc_id==0) {
    printf("# Performing parallel IO test ...\n");
  }
  xlfInfo = construct_paramsXlfInfo(0.5, 0);
  write_gauge_field( "conf.test", 64, xlfInfo);
  free(xlfInfo);
  if(g_proc_id==0) {
    printf("# done ...\n");
  }
#endif


#ifdef MPI
  MPI_Finalize();
#endif
#ifdef OMP
  free_omp_accumulators();
#endif
  free_gauge_field();
  free_geometry_indices();
  free_spinor_field();
  free_moment_field();
  return(0);
}
Пример #8
0
int main(int argc, char *argv[])
{

  FILE *parameterfile = NULL;
  int c, j;
  char * filename = NULL;
  char datafilename[50];
  char parameterfilename[50];
  char conf_filename[50];
  char * input_filename = NULL;
  char * xlfmessage = NULL;
  char * gaugelfn = NULL;
  char * gaugecksum = NULL;
  double plaquette_energy;

#ifdef _KOJAK_INST
#pragma pomp inst init
#pragma pomp inst begin(main)
#endif

#ifdef HAVE_LIBLEMON
  MPI_File fh;
  LemonWriter *lemonWriter;
  paramsXlfInfo *xlfInfo;
  paramsPropagatorFormat *propagatorFormat;
#endif

#if (defined SSE || defined SSE2 || SSE3)
  signal(SIGILL, &catch_ill_inst);
#endif

  DUM_DERI = 6;
  /* DUM_DERI + 2 is enough (not 7) */
  DUM_SOLVER = DUM_DERI + 3;
  DUM_MATRIX = DUM_SOLVER + 8;
  /* DUM_MATRIX + 2 is enough (not 6) */
  NO_OF_SPINORFIELDS = DUM_MATRIX + 2;

  verbose = 0;
  g_use_clover_flag = 0;

#ifdef MPI
  MPI_Init(&argc, &argv);
#endif

  while ((c = getopt(argc, argv, "h?f:o:")) != -1) {
    switch (c) {
      case 'f':
        input_filename = calloc(200, sizeof(char));
        strcpy(input_filename, optarg);
        break;
      case 'o':
        filename = calloc(200, sizeof(char));
        strcpy(filename, optarg);
        break;
      case 'h':
      case '?':
      default:
        usage();
        break;
    }
  }
  if (input_filename == NULL) {
    input_filename = "hmc.input";
  }
  if (filename == NULL) {
    filename = "output";
  }

  /* Read the input file */
  read_input(input_filename);
  if (solver_flag == 12 && even_odd_flag == 1) {
    even_odd_flag = 0;
    if (g_proc_id == 0) {
      fprintf(stderr, "CGMMS works only without even/odd! Forcing!\n");
    }
  }

  /* this DBW2 stuff is not needed for the inversion ! */
  if (g_dflgcr_flag == 1) {
    even_odd_flag = 0;
  }
  g_rgi_C1 = 0;
  if (Nsave == 0) {
    Nsave = 1;
  }

  if(g_running_phmc) {
    NO_OF_SPINORFIELDS = DUM_MATRIX + 8;
  }

  mpi_init(argc, argv);

  g_dbw2rand = 0;

  /* starts the single and double precision random number */
  /* generator                                            */
  start_ranlux(rlxd_level, random_seed);

#ifndef MPI
  g_dbw2rand = 0;
#endif

#ifdef _GAUGE_COPY
  j = init_gauge_field(VOLUMEPLUSRAND, 1);
#else
  j = init_gauge_field(VOLUMEPLUSRAND, 0);
#endif
  if(j != 0) {
    fprintf(stderr, "Not enough memory for gauge_fields! Aborting...\n");
    exit(-1);
  }
  j = init_geometry_indices(VOLUMEPLUSRAND);
  if(j != 0) {
    fprintf(stderr, "Not enough memory for geometry indices! Aborting...\n");
    exit(-1);
  }
  if(no_monomials > 0) {
    if(even_odd_flag) {
      j = init_monomials(VOLUMEPLUSRAND / 2, even_odd_flag);
    }
    else {
      j = init_monomials(VOLUMEPLUSRAND, even_odd_flag);
    }
    if(j != 0) {
      fprintf(stderr, "Not enough memory for monomial pseudo fermion  fields! Aborting...\n");
      exit(0);
    }
  }
  if(even_odd_flag) {
    j = init_spinor_field(VOLUMEPLUSRAND / 2, NO_OF_SPINORFIELDS);
  }
  else {
    j = init_spinor_field(VOLUMEPLUSRAND, NO_OF_SPINORFIELDS);
  }
  if(j != 0) {
    fprintf(stderr, "Not enough memory for spinor fields! Aborting...\n");
    exit(-1);
  }

  if(g_running_phmc) {
    j = init_chi_up_spinor_field(VOLUMEPLUSRAND / 2, 20);
    if(j != 0) {
      fprintf(stderr, "Not enough memory for PHMC Chi_up fields! Aborting...\n");
      exit(0);
    }
    j = init_chi_dn_spinor_field(VOLUMEPLUSRAND / 2, 20);
    if(j != 0) {
      fprintf(stderr, "Not enough memory for PHMC Chi_dn fields! Aborting...\n");
      exit(0);
    }
  }

  g_mu = g_mu1;
  if(g_proc_id == 0) {
    /*construct the filenames for the observables and the parameters*/
    strcpy(datafilename, filename);
    strcat(datafilename, ".data");
    strcpy(parameterfilename, filename);
    strcat(parameterfilename, ".para");

    parameterfile = fopen(parameterfilename, "w");
    write_first_messages(parameterfile, 1);
    fclose(parameterfile);
  }

  /* this is for the extra masses of the CGMMS */
  if (solver_flag == 12 && g_no_extra_masses > 0) {
    if ((parameterfile = fopen("extra_masses.input", "r")) != NULL) {
      for (j = 0; j < g_no_extra_masses; j++) {
        fscanf(parameterfile, "%lf", &g_extra_masses[j]);
        if (g_proc_id == 0 && g_debug_level > 0) {
          printf("# g_extra_masses[%d] = %lf\n", j, g_extra_masses[j]);
        }
      }
      fclose(parameterfile);
    }
    else {
      fprintf(stderr, "Could not open file extra_masses.input!\n");
      g_no_extra_masses = 0;
    }
  }

  /* define the geometry */
  geometry();

  /* define the boundary conditions for the fermion fields */
  boundary(g_kappa);

  phmc_invmaxev = 1.;


#ifdef _USE_HALFSPINOR
  j = init_dirac_halfspinor();
  if (j != 0) {
    fprintf(stderr, "Not enough memory for halffield! Aborting...\n");
    exit(-1);
  }
  if (g_sloppy_precision_flag == 1) {
    j = init_dirac_halfspinor32();
    if (j != 0) {
      fprintf(stderr, "Not enough memory for 32-Bit halffield! Aborting...\n");
      exit(-1);
    }
  }
#  if (defined _PERSISTENT)
  if (even_odd_flag) {
    init_xchange_halffield();
  }
#  endif
#endif

  for (j = 0; j < Nmeas; j++) {
    sprintf(conf_filename, "%s.%.4d", gauge_input_filename, nstore);
    if (g_proc_id == 0) {
      printf("Reading Gauge field from file %s\n", conf_filename);
      fflush(stdout);
    }
#ifdef HAVE_LIBLEMON
    read_lemon_gauge_field_parallel(conf_filename, &gaugecksum, &xlfmessage, &gaugelfn);
#else /* HAVE_LIBLEMON */
    if (xlfmessage != (char*)NULL)
      free(xlfmessage);
    if (gaugelfn != (char*)NULL)
      free(gaugelfn);
    if (gaugecksum != (char*)NULL)
      free(gaugecksum);
    read_lime_gauge_field(conf_filename);
    xlfmessage = read_message(conf_filename, "xlf-info");
    gaugelfn = read_message(conf_filename, "ildg-data-lfn");
    gaugecksum = read_message(conf_filename, "scidac-checksum");
    printf("%s \n", gaugecksum);
#endif /* HAVE_LIBLEMON */
    if (g_proc_id == 0) {
      printf("done!\n");
      fflush(stdout);
    }
    /*     unit_g_gauge_field(); */
#ifdef MPI
    xchange_gauge(g_gauge_field);
#endif

    /*compute the energy of the gauge field*/
    plaquette_energy = measure_gauge_action();

    if (g_proc_id == 0) {
      printf("The plaquette value is %e\n", plaquette_energy / (6.*VOLUME*g_nproc));
      fflush(stdout);
    }

    if (use_stout_flag == 1) {
      if (stout_smear_gauge_field(stout_rho , stout_no_iter) != 0) {
        exit(1) ;
      }
      plaquette_energy = measure_gauge_action();

      if (g_proc_id == 0) {
        printf("The plaquette value after stouting is %e\n", plaquette_energy / (6.*VOLUME*g_nproc));
        fflush(stdout);
      }
    }

	/* Compute minimal eigenvalues, necessary for overlap! */
	if (compute_evs != 0)
		eigenvalues(&no_eigenvalues, max_solver_iterations, eigenvalue_precision, 0, compute_evs, nstore, even_odd_flag);
	else {
		compute_evs = 1;
		no_eigenvalues = 1;
		eigenvalues(&no_eigenvalues, max_solver_iterations, eigenvalue_precision, 0, compute_evs, nstore, even_odd_flag);
		no_eigenvalues = 0;
		compute_evs = 0;
	}

	if (phmc_compute_evs != 0) {
#ifdef MPI
		MPI_Finalize();
#endif
		return (0);
	}

	/* here we can do something */
	ov_n_cheby = (-log(delta))/(2*sqrt(ev_minev));
	printf("// Degree of cheby polynomial: %d\n", ov_n_cheby);
//    g_mu = 0.;
	ov_check_locality();
//	ov_check_ginsparg_wilson_relation_strong();
//	ov_compare_4x4("overlap.mat");
//	ov_compare_12x12("overlap.mat");
//	ov_save_12x12("overlap.mat");
//	ov_check_operator(1,0,0,0);

    nstore += Nsave;
  }
#ifdef MPI
  MPI_Finalize();
#endif

  free_blocks();
  free_dfl_subspace();
  free_gauge_field();
  free_geometry_indices();
  free_spinor_field();
  free_moment_field();
  if (g_running_phmc) {
    free_chi_up_spinor_field();
    free_chi_dn_spinor_field();
  }
  return(0);
#ifdef _KOJAK_INST
#pragma pomp inst end(main)
#endif
}
Пример #9
0
int main(int argc, char *argv[])
{
  FILE *parameterfile = NULL;
  int j, i, ix = 0, isample = 0, op_id = 0;
  char datafilename[206];
  char parameterfilename[206];
  char conf_filename[50];
  char * input_filename = NULL;
  char * filename = NULL;
  double plaquette_energy;
  struct stout_parameters params_smear;

#ifdef _KOJAK_INST
#pragma pomp inst init
#pragma pomp inst begin(main)
#endif

#if (defined SSE || defined SSE2 || SSE3)
  signal(SIGILL, &catch_ill_inst);
#endif

  DUM_DERI = 8;
  DUM_MATRIX = DUM_DERI + 5;
  NO_OF_SPINORFIELDS = DUM_MATRIX + 4;

  //4 extra fields (corresponding to DUM_MATRIX+0..5) for deg. and ND matrix mult.  
  NO_OF_SPINORFIELDS_32 = 6;

  verbose = 0;
  g_use_clover_flag = 0;


  process_args(argc,argv,&input_filename,&filename);
  set_default_filenames(&input_filename, &filename);

  init_parallel_and_read_input(argc, argv, input_filename);

  /* this DBW2 stuff is not needed for the inversion ! */
  if (g_dflgcr_flag == 1) {
    even_odd_flag = 0;
  }
  g_rgi_C1 = 0;
  if (Nsave == 0) {
    Nsave = 1;
  }

  if (g_running_phmc) {
    NO_OF_SPINORFIELDS = DUM_MATRIX + 8;
  }

  tmlqcd_mpi_init(argc, argv);

  g_dbw2rand = 0;

  /* starts the single and double precision random number */
  /* generator                                            */
  start_ranlux(rlxd_level, random_seed^nstore);

  /* we need to make sure that we don't have even_odd_flag = 1 */
  /* if any of the operators doesn't use it                    */
  /* in this way even/odd can still be used by other operators */
  for(j = 0; j < no_operators; j++) if(!operator_list[j].even_odd_flag) even_odd_flag = 0;

#ifndef TM_USE_MPI
  g_dbw2rand = 0;
#endif

#ifdef _GAUGE_COPY
  j = init_gauge_field(VOLUMEPLUSRAND, 1);
  j += init_gauge_field_32(VOLUMEPLUSRAND, 1);
#else
  j = init_gauge_field(VOLUMEPLUSRAND, 0);
  j += init_gauge_field_32(VOLUMEPLUSRAND, 0);  
#endif
 
  if (j != 0) {
    fprintf(stderr, "Not enough memory for gauge_fields! Aborting...\n");
    exit(-1);
  }
  j = init_geometry_indices(VOLUMEPLUSRAND);
  if (j != 0) {
    fprintf(stderr, "Not enough memory for geometry indices! Aborting...\n");
    exit(-1);
  }
  if (no_monomials > 0) {
    if (even_odd_flag) {
      j = init_monomials(VOLUMEPLUSRAND / 2, even_odd_flag);
    }
    else {
      j = init_monomials(VOLUMEPLUSRAND, even_odd_flag);
    }
    if (j != 0) {
      fprintf(stderr, "Not enough memory for monomial pseudo fermion fields! Aborting...\n");
      exit(-1);
    }
  }
  if (even_odd_flag) {
    j = init_spinor_field(VOLUMEPLUSRAND / 2, NO_OF_SPINORFIELDS);
    j += init_spinor_field_32(VOLUMEPLUSRAND / 2, NO_OF_SPINORFIELDS_32);   
  }
  else {
    j = init_spinor_field(VOLUMEPLUSRAND, NO_OF_SPINORFIELDS);
    j += init_spinor_field_32(VOLUMEPLUSRAND, NO_OF_SPINORFIELDS_32);   
  }
  if (j != 0) {
    fprintf(stderr, "Not enough memory for spinor fields! Aborting...\n");
    exit(-1);
  }

  if (g_running_phmc) {
    j = init_chi_spinor_field(VOLUMEPLUSRAND / 2, 20);
    if (j != 0) {
      fprintf(stderr, "Not enough memory for PHMC Chi fields! Aborting...\n");
      exit(-1);
    }
  }

  g_mu = g_mu1;

  if (g_cart_id == 0) {
    /*construct the filenames for the observables and the parameters*/
    strncpy(datafilename, filename, 200);
    strcat(datafilename, ".data");
    strncpy(parameterfilename, filename, 200);
    strcat(parameterfilename, ".para");

    parameterfile = fopen(parameterfilename, "w");
    write_first_messages(parameterfile, "invert", git_hash);
    fclose(parameterfile);
  }

  /* define the geometry */
  geometry();

  /* define the boundary conditions for the fermion fields */
  boundary(g_kappa);

  phmc_invmaxev = 1.;

  init_operators();

  /* list and initialize measurements*/
  if(g_proc_id == 0) {
    printf("\n");
    for(int j = 0; j < no_measurements; j++) {
      printf("# measurement id %d, type = %d\n", j, measurement_list[j].type);
    }
  }
  init_measurements();  

  /* this could be maybe moved to init_operators */
#ifdef _USE_HALFSPINOR
  j = init_dirac_halfspinor();
  if (j != 0) {
    fprintf(stderr, "Not enough memory for halffield! Aborting...\n");
    exit(-1);
  }
  /* for mixed precision solvers, the 32 bit halfspinor field must always be there */
  j = init_dirac_halfspinor32();
  if (j != 0)
  {
    fprintf(stderr, "Not enough memory for 32-bit halffield! Aborting...\n");
    exit(-1);
  }
#  if (defined _PERSISTENT)
  if (even_odd_flag)
    init_xchange_halffield();
#  endif
#endif

  for (j = 0; j < Nmeas; j++) {
    sprintf(conf_filename, "%s.%.4d", gauge_input_filename, nstore);
    if (g_cart_id == 0) {
      printf("#\n# Trying to read gauge field from file %s in %s precision.\n",
            conf_filename, (gauge_precision_read_flag == 32 ? "single" : "double"));
      fflush(stdout);
    }
    if( (i = read_gauge_field(conf_filename,g_gauge_field)) !=0) {
      fprintf(stderr, "Error %d while reading gauge field from %s\n Aborting...\n", i, conf_filename);
      exit(-2);
    }


    if (g_cart_id == 0) {
      printf("# Finished reading gauge field.\n");
      fflush(stdout);
    }
#ifdef TM_USE_MPI
    xchange_gauge(g_gauge_field);
#endif
    /*Convert to a 32 bit gauge field, after xchange*/
    convert_32_gauge_field(g_gauge_field_32, g_gauge_field, VOLUMEPLUSRAND);
    /*compute the energy of the gauge field*/
    plaquette_energy = measure_plaquette( (const su3**) g_gauge_field);

    if (g_cart_id == 0) {
      printf("# The computed plaquette value is %e.\n", plaquette_energy / (6.*VOLUME*g_nproc));
      fflush(stdout);
    }

    if (use_stout_flag == 1){
      params_smear.rho = stout_rho;
      params_smear.iterations = stout_no_iter;
/*       if (stout_smear((su3_tuple*)(g_gauge_field[0]), &params_smear, (su3_tuple*)(g_gauge_field[0])) != 0) */
/*         exit(1) ; */
      g_update_gauge_copy = 1;
      plaquette_energy = measure_plaquette( (const su3**) g_gauge_field);

      if (g_cart_id == 0) {
        printf("# The plaquette value after stouting is %e\n", plaquette_energy / (6.*VOLUME*g_nproc));
        fflush(stdout);
      }
    }

    /* if any measurements are defined in the input file, do them here */
    measurement * meas;
    for(int imeas = 0; imeas < no_measurements; imeas++){
      meas = &measurement_list[imeas];
      if (g_proc_id == 0) {
        fprintf(stdout, "#\n# Beginning online measurement.\n");
      }
      meas->measurefunc(nstore, imeas, even_odd_flag);
    }

    if (reweighting_flag == 1) {
      reweighting_factor(reweighting_samples, nstore);
    }

    /* Compute minimal eigenvalues, if wanted */
    if (compute_evs != 0) {
      eigenvalues(&no_eigenvalues, 5000, eigenvalue_precision,
                  0, compute_evs, nstore, even_odd_flag);
    }
    if (phmc_compute_evs != 0) {
#ifdef TM_USE_MPI
      MPI_Finalize();
#endif
      return(0);
    }

    /* Compute the mode number or topological susceptibility using spectral projectors, if wanted*/
    if(compute_modenumber != 0 || compute_topsus !=0){
      invert_compute_modenumber(); 
    }

    //  set up blocks if Deflation is used 
    if (g_dflgcr_flag) 
      init_blocks(nblocks_t, nblocks_x, nblocks_y, nblocks_z);
    
    if(SourceInfo.type == SRC_TYPE_VOL || SourceInfo.type == SRC_TYPE_PION_TS || SourceInfo.type == SRC_TYPE_GEN_PION_TS) {
      index_start = 0;
      index_end = 1;
    }

    g_precWS=NULL;
    if(use_preconditioning == 1){
      /* todo load fftw wisdom */
#if (defined HAVE_FFTW ) && !( defined TM_USE_MPI)
      loadFFTWWisdom(g_spinor_field[0],g_spinor_field[1],T,LX);
#else
      use_preconditioning=0;
#endif
    }

    if (g_cart_id == 0) {
      fprintf(stdout, "#\n"); /*Indicate starting of the operator part*/
    }
    for(op_id = 0; op_id < no_operators; op_id++) {
      boundary(operator_list[op_id].kappa);
      g_kappa = operator_list[op_id].kappa; 
      g_mu = operator_list[op_id].mu;
      g_c_sw = operator_list[op_id].c_sw;
      // DFLGCR and DFLFGMRES
      if(operator_list[op_id].solver == DFLGCR || operator_list[op_id].solver == DFLFGMRES) {
        generate_dfl_subspace(g_N_s, VOLUME, reproduce_randomnumber_flag);
      }

      if(use_preconditioning==1 && PRECWSOPERATORSELECT[operator_list[op_id].solver]!=PRECWS_NO ){
        printf("# Using preconditioning with treelevel preconditioning operator: %s \n",
              precWSOpToString(PRECWSOPERATORSELECT[operator_list[op_id].solver]));
        /* initial preconditioning workspace */
        operator_list[op_id].precWS=(spinorPrecWS*)malloc(sizeof(spinorPrecWS));
        spinorPrecWS_Init(operator_list[op_id].precWS,
                  operator_list[op_id].kappa,
                  operator_list[op_id].mu/2./operator_list[op_id].kappa,
                  -(0.5/operator_list[op_id].kappa-4.),
                  PRECWSOPERATORSELECT[operator_list[op_id].solver]);
        g_precWS = operator_list[op_id].precWS;

        if(PRECWSOPERATORSELECT[operator_list[op_id].solver] == PRECWS_D_DAGGER_D) {
          fitPrecParams(op_id);
        }
      }

      for(isample = 0; isample < no_samples; isample++) {
        for (ix = index_start; ix < index_end; ix++) {
          if (g_cart_id == 0) {
            fprintf(stdout, "#\n"); /*Indicate starting of new index*/
          }
          /* we use g_spinor_field[0-7] for sources and props for the moment */
          /* 0-3 in case of 1 flavour  */
          /* 0-7 in case of 2 flavours */
          prepare_source(nstore, isample, ix, op_id, read_source_flag, source_location, random_seed);
          //randmize initial guess for eigcg if needed-----experimental
          if( (operator_list[op_id].solver == INCREIGCG) && (operator_list[op_id].solver_params.eigcg_rand_guess_opt) ){ //randomize the initial guess
              gaussian_volume_source( operator_list[op_id].prop0, operator_list[op_id].prop1,isample,ix,0); //need to check this
          } 
          operator_list[op_id].inverter(op_id, index_start, 1);
        }
      }


      if(use_preconditioning==1 && operator_list[op_id].precWS!=NULL ){
        /* free preconditioning workspace */
        spinorPrecWS_Free(operator_list[op_id].precWS);
        free(operator_list[op_id].precWS);
      }

      if(operator_list[op_id].type == OVERLAP){
        free_Dov_WS();
      }

    }
    nstore += Nsave;
  }

#ifdef TM_USE_OMP
  free_omp_accumulators();
#endif
  free_blocks();
  free_dfl_subspace();
  free_gauge_field();
  free_gauge_field_32();
  free_geometry_indices();
  free_spinor_field();
  free_spinor_field_32();  
  free_moment_field();
  free_chi_spinor_field();
  free(filename);
  free(input_filename);
  free(SourceInfo.basename);
  free(PropInfo.basename);
#ifdef TM_USE_QUDA
  _endQuda();
#endif
#ifdef TM_USE_MPI
  MPI_Barrier(MPI_COMM_WORLD);
  MPI_Finalize();
#endif
  return(0);
#ifdef _KOJAK_INST
#pragma pomp inst end(main)
#endif
}