void ContactView::keyhoteeIdEdited(const QString& id)
{
_last_validate = fc::time_point::now();
ui->id_status->setText(tr("Looking up id...") );
fc::async( [ = ](){
fc::usleep(fc::microseconds(500 * 1000) );
if (fc::time_point::now() > (_last_validate + fc::microseconds(500 * 1000)))
lookupId();
}
);
}
/** starts a lookup timer that will send a query one second
* after the most recent edit unless another character is
* entered.
*/
void validateId(const QString& id)
{
_complete = false;
completeChanged();
_last_validate = fc::time_point::now();
_profile_nym_ui.id_warning->setText(tr("Checking availability of ID...") );
fc::async( [ = ](){
fc::usleep(fc::microseconds(500 * 1000) );
if (fc::time_point::now() > (_last_validate + fc::microseconds(500 * 1000)) )
lookupId();
}
);
}
void EditContactDialog::validateId( const QString& id )
{
/** TODO
if( is_address( id ) )
{
_complete = true;
}
else
*/
{
_complete = false;
//completeChanged();
_last_validate = fc::time_point::now();
ui->id_status->setText( tr( "Looking up id..." ) );
fc::async( [=](){
fc::usleep( fc::microseconds(500*1000) );
if( fc::time_point::now() > (_last_validate + fc::microseconds(500*1000)) )
{
lookupId();
}
} );
}
}
void encodeExpToTab(char *outExp, char *outSeries, char *outResults)
/* encodeExpToCvDb - Convert encode experiments table to a table more suitable for cvDb. */
{
struct hash *optHash = optionalFieldsHash();
struct mdbObj *mdbList = getMdbList(metaDbs, ArraySize(metaDbs));
struct hash *mdbHash = mdbHashKeyedByExpId(mdbList);
struct hash *seriesHash = hashNew(0);
struct series *seriesList = NULL;
verbose(1, "read %d mdb objects from %s in %d databases\n", mdbHash->elCount, metaTable,
(int)ArraySize(metaDbs));
struct sqlConnection *expDbConn = sqlConnect(expDb);
struct sqlConnection *cvDbConn = sqlConnect(cvDb);
char query[256];
sqlSafef(query, sizeof(query), "select * from %s", expTable);
struct sqlResult *sr = sqlGetResult(expDbConn, query);
FILE *f = mustOpen(outExp, "w");
char **row;
while ((row = sqlNextRow(sr)) != NULL)
{
/* Read in database structure. */
struct encodeExp *ee = encodeExpLoad(row);
/* Much of the data we're processing comes from lists of the form
* "a=aVal b=bVal c=cVal." We'll convert these to id's in the appropriate
* tables and store the IDs in the optCol array declared below. */
int optColCount = ArraySize(expOptionalFields);
int optCol[optColCount];
int i;
for (i=0; i<optColCount; ++i)
optCol[i] = 0;
/* Convert var=val string in encodeExp.expVars into list of slPairs, and loop through it. */
struct slPair *varList = slPairListFromString(ee->expVars, TRUE);
struct slPair *var;
for (var = varList; var != NULL; var = var->next)
{
/* Figure out name of table and the term within that table. */
char *table = var->name;
char *term = var->val;
if (sameString(table, "antibody")) // Deal with antibody special case
{
if (sameString(term, "Control") || sameString(term, "Input")
|| sameString(term, "RevXlinkChromatin") || sameString(term, "ripInput"))
{
table = "control";
}
}
/* If it looks like we have a valid table and term, store result in
* optCol array we'll output soon. */
struct hashEl *hel;
if ((hel = hashLookup(optHash, table)) != NULL)
{
int id = lookupId(cvDbConn, table, term);
if (id == 0)
{
warn("No id in cvDb for %s=%s\n", table, term);
continue;
}
int optColIx = ptToInt(hel->val);
optCol[optColIx] = id;
}
else
verbose(2, "%s %s ?\n", table, term);
}
/* Now we want to process metaDb, which has some info encodeExp does not. */
char *composite = NULL;
char ixAsString[16];
safef(ixAsString, sizeof(ixAsString), "%d", ee->ix);
struct mdbObj *mdb = hashFindVal(mdbHash, ixAsString);
if (mdb != NULL)
{
struct mdbVar *v;
for (v = mdb->vars; v != NULL; v = v->next)
{
/* Look up table and term and change table name if need be */
char *table = v->var;
char *term = v->val;
if (sameString(table, "antibody"))
table = "ab";
else if (sameString(table, "grant"))
table = "grantee";
/* Squirrel away the ever-important composite term for later. */
if (sameString("composite", table))
composite = term;
struct hashEl *hel;
if ((hel = hashLookup(optHash, table)) != NULL)
{
int optColIx = ptToInt(hel->val);
if (optCol[optColIx] == 0) // Only use mdb if encodeExp has no data.
{
int id = lookupId(cvDbConn, table, term);
optCol[optColIx] = id;
}
}
}
}
/* If we've got a composite, then make up a series record. */
if (composite != NULL)
{
assert(mdb != NULL);
struct series *series = hashFindVal(seriesHash, composite);
if (series == NULL)
{
series = seriesFromMdb(mdb, composite);
hashAdd(seriesHash, composite, series);
slAddHead(&seriesList, series);
}
}
if (ee->accession != NULL)
{
/* Write out required fields. Order of required fields
* here needs to follow order in expRequiredFields. */
fprintf(f, "%u", ee->ix);
fprintf(f, "\t%s", ee->updateTime);
fprintf(f, "\t%s", naForNull(composite));
fprintf(f, "\t%s", ee->accession);
fprintf(f, "\t%d", lookupId(cvDbConn, "organism", ee->organism));
fprintf(f, "\t%d", lookupId(cvDbConn, "lab", ee->lab));
fprintf(f, "\t%d", lookupId(cvDbConn, "dataType", ee->dataType));
fprintf(f, "\t%d", lookupId(cvDbConn, "cellType", ee->cellType));
/* Now write out optional fields. */
for (i=0; i<optColCount; ++i)
fprintf(f, "\t%d", optCol[i]);
/* End output record. */
fprintf(f, "\n");
}
}
/* Write out series list to a separate file. */
slReverse(&seriesList);
writeSeriesList(outSeries, seriesList);
/* Write out results to a separate file. */
writeMdbListAsResults(mdbList, outResults);
/* Clean up and go home. */
carefulClose(&f);
sqlFreeResult(&sr);
sqlDisconnect(&expDbConn);
sqlDisconnect(&cvDbConn);
}
void runClient(int sockfd, const char* server, unsigned port)
{
char input[BUFFER_SIZE];
char output = CLI_EXIT_MSG;
char* idStr = NULL;
char* data = NULL;
unsigned id = 0;
unsigned countId = 0;
int numDigits = 0;
fd_set fds;
if(sockfd == -1)
return;
FD_ZERO(&fds);
printf(WELCOME_MSG, server, port);
while(1) {
FD_SET(sockfd, &fds);
fgets(input, BUFFER_SIZE, stdin);
if(strncasecmp("help", input, strlen("help")) == 0) {
printf(HELP_MSG);
} else if(strlen(input) > 6) {
input[6] = '\0'; /* All commands should have a space here */
idStr = input+7;
id = atoi(idStr);
countId = id;
/* Count number of char's for id */
numDigits = 0;
while(countId) { /* In base 10 */
countId /= 10;
numDigits++;
}
data = idStr + numDigits + 1; /* If needed */
/* Determine what we want to do */
if(strncasecmp(input, "insert", strlen("insert")) == 0) {
output = CLI_INS_MSG;
} else if(strncasecmp(input, "remove", strlen("remove")) == 0) {
output = CLI_REM_MSG;
} else if(strncasecmp(input, "lookup", strlen("lookup")) == 0) {
output = CLI_FIND_MSG;
}
select(sockfd+1, NULL, &fds, NULL, NULL);
sendData(sockfd, &output, sizeof(output));
switch(output)
{
default:
/* Do nothing */
break;
case CLI_INS_MSG:
insertId(sockfd, id, data);
break;
case CLI_REM_MSG:
removeId(sockfd, id);
break;
case CLI_FIND_MSG:
/* Need to actually display this information if valid */
lookupId(sockfd, id);
break;
}
} else if(strncasecmp("exit", input, strlen("exit")) == 0) {
output = CLI_EXIT_MSG;
sendData(sockfd, &output, sizeof(output));
break;
} else {
fprintf(stderr, "Unknown command\n");
}
}
}
