int readSecondSeq( char *seq, int line )
{
int i=0, l=0;
char cur;
while (1)
{
if (*_r_buf2_pos ==*_r_buf2_size)
{
readBuffer2();
if (*_r_buf2_size == 0)
return 0;
}
cur = _r_buf2[*_r_buf2_pos];
(*_r_buf2_pos)++;
if ( cur == '\n')
{
if (l>0) i=l;
seq[i]='\0';
return i;
}
if (cur == ' '&& l==0)
{
l = i;
}
if (cropSize>0 && line%2==0 && i==cropSize)
continue;
seq[i++]=cur;
}
}
Task::ReportResult GTest_hmmCompare::report() {
QFileInfo fi1(env->getVar("COMMON_DATA_DIR")+"/"+file1Name);
QString url1 = fi1.absoluteFilePath();
IOAdapterFactory* iof1 = AppContext::getIOAdapterRegistry()->getIOAdapterFactoryById(IOAdapterUtils::url2io(url1));
QScopedPointer<IOAdapter> io1(iof1->createIOAdapter());
//QFile file1(fi1.absoluteFilePath());
QFileInfo fi2(env->getVar("TEMP_DATA_DIR")+"/"+file2Name);
QString url2 = fi2.absoluteFilePath();
IOAdapterFactory* iof2 = AppContext::getIOAdapterRegistry()->getIOAdapterFactoryById(IOAdapterUtils::url2io(url2));
QScopedPointer<IOAdapter> io2(iof2->createIOAdapter());
fi2.absoluteDir().mkdir(fi2.absoluteDir().absolutePath()); // ???
//QFile file2(fi2.absoluteFilePath());
if(!io1->open(url1, IOAdapterMode_Read)){
stateInfo.setError( QString("File opening error \"%1\", description: ").arg(url1) );//+file1.errorString() );
return ReportResult_Finished;
}
//file2.open(QIODevice::ReadOnly|QIODevice::Text);
if(!io2->open(url2, IOAdapterMode_Read)){
stateInfo.setError( QString("File opening error \"%1\", description: ").arg(url2) );//+file2.errorString() );
return ReportResult_Finished;
}
static int READ_BUFF_SIZE = 4096;
qint64 len1, len2, line1 = 0, line2 = 0;
QByteArray readBuffer1(READ_BUFF_SIZE, '\0'), readBuffer2(READ_BUFF_SIZE, '\0');
char* cbuff1 = readBuffer1.data();
char* cbuff2 = readBuffer2.data();
QRegExp rx("CKSUM ");
bool ok = false;
while ( (len1 = io1->readUntil(cbuff1, READ_BUFF_SIZE, TextUtils::LINE_BREAKS, IOAdapter::Term_Include)) > 0 ) {
line1++;
if ((ok = rx.indexIn(QString(QByteArray(cbuff1, len1))) !=-1)) {
break;
}
}
if(!ok){
stateInfo.setError( QString("can't find CKSUM in file \"%1\"").arg(url1) );
return ReportResult_Finished;
}
ok = false;
while ( (len2 = io2->readUntil(cbuff2, READ_BUFF_SIZE, TextUtils::LINE_BREAKS, IOAdapter::Term_Include)) > 0 ) {
line2++;
if ((ok = rx.indexIn(QString(QByteArray(cbuff2, len2))) !=-1)) {
break;
}
}
if(!ok){
stateInfo.setError( QString("can't find CKSUM in file \"%1\"").arg(url2) );
return ReportResult_Finished;
}
do{
len1 = io1->readUntil(cbuff1, READ_BUFF_SIZE, TextUtils::LINE_BREAKS, IOAdapter::Term_Include);
len2 = io2->readUntil(cbuff2, READ_BUFF_SIZE, TextUtils::LINE_BREAKS, IOAdapter::Term_Include);
if(len1 == 0 && 0 != len2){
stateInfo.setError( QString("hmm-compare: files not equal, desc: files length mismatch") );
return ReportResult_Finished;
}
line1++;line2++;
QString s1 = QString::fromLatin1(cbuff1, len1).trimmed();
QString s2 = QString::fromLatin1(cbuff2, len2).trimmed();
if(s1 != s2)
{
stateInfo.setError( QString("hmm-compare: files not equal, desc: file1, line %1 \"%2\", expected file2, line %3 \"%4\"")
.arg(line1).arg(s1).arg(line2).arg(s2) );
return ReportResult_Finished;
}
} while(len1 > 0);
return ReportResult_Finished;
}
