void rec(const char *filename="raw.root")
{
/////////////////////////////////////////////////////////////////////////////////////////
//
// Reconstruction script for 2011 RAW data - muon fast reco
//
/////////////////////////////////////////////////////////////////////////////////////////
// Set the CDB storage location
AliCDBManager * man = AliCDBManager::Instance();
man->SetDefaultStorage("alien://folder=/alice/data/2011/OCDB");
AliReconstruction rec;
// Generate or use the local OCDB.root file
// rec.SetFromCDBSnapshot("OCDB.root");
// Set reconstruction flags (skip detectors here if neded with -<detector name>
// rec.SetRunReconstruction("MUON ITS VZERO ZDC T0");
rec.SetRunReconstruction("MUON ITS");
// QA options
rec.SetRunQA("Global MUON:ALL") ;
rec.SetQARefDefaultStorage("local://$ALICE_ROOT/QAref") ;
// MUON only reco - recoparameters
rec.SetRecoParam("ITS",GetSpecialITSRecoParam());
// AliReconstruction settings
rec.SetWriteESDfriend(kTRUE);
rec.SetWriteAlignmentData();
// rec.SetInput(filename);
rec.SetUseTrackingErrorsForAlignment("ITS");
// switch off cleanESD
rec.SetCleanESD(kFALSE);
// Specific reco params for ZDC (why isn't this automatic?)
// rec.SetRecoParam("ZDC",AliZDCRecoParamPbPb::GetHighFluxParam(2760));
//Ignore SetStopOnError
rec.SetStopOnError(kFALSE);
AliLog::Flush();
rec.Run();
}
void recraw() {
// AliReconstruction settings
AliReconstruction reco;
reco.SetWriteESDfriend(kTRUE);
reco.SetWriteAlignmentData();
reco.SetInput("raw.root");
reco.SetDefaultStorage("local://$ALICE_ROOT/OCDB");
reco.SetSpecificStorage("GRP/GRP/Data",
Form("local://%s/..",gSystem->pwd()));
reco.SetUseTrackingErrorsForAlignment("ITS");
// all events in one single file
reco.SetNumberOfEventsPerFile(-1);
// switch off cleanESD
reco.SetCleanESD(kFALSE);
reco.SetRunQA("ALL:ALL") ;
reco.SetQARefDefaultStorage("local://$ALICE_ROOT/OCDB") ;
for (Int_t det = 0 ; det < AliQA::kNDET ; det++) {
reco.SetQACycles(det, 9999) ;
reco.SetQAWriteExpert(det) ;
}
AliLog::Flush();
TStopwatch timer;
timer.Start();
reco.Run();
timer.Stop();
timer.Print();
}
void rec() {
AliReconstruction reco;
//
// switch off cleanESD, write ESDfriends and Alignment data
reco.SetCleanESD(kFALSE);
reco.SetWriteESDfriend();
reco.SetWriteAlignmentData();
//
// ITS Efficiency and tracking errors
reco.SetRunPlaneEff(kTRUE);
reco.SetUseTrackingErrorsForAlignment("ITS");
//
// Residual OCDB
reco.SetDefaultStorage("alien://Folder=/alice/simulation/2008/v4-15-Release/Residual/");
//
// GRP from local OCDB
reco.SetSpecificStorage("GRP/GRP/Data",
Form("local://%s",gSystem->pwd()));
//
// Vertex from RAW OCDB
reco.SetSpecificStorage("GRP/Calib/MeanVertexTPC","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("GRP/Calib/MeanVertex","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("GRP/Calib/MeanVertexSPD", "alien://folder=/alice/data/2010/OCDB");
//
// EMCAL from RAW OCDB
reco.SetSpecificStorage("EMCAL/Calib/Data","alien://Folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("EMCAL/Calib/Pedestals","alien://Folder=/alice/data/2010/OCDB");
//
// PHOS from RAW OCDB
reco.SetSpecificStorage("PHOS/Calib/EmcBadChannels","alien://Folder=/alice/data/2010/OCDB");
//
// SPD and SDD from RAW OCDB
reco.SetSpecificStorage("ITS/Calib/SPDDead","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("TRIGGER/SPD/PITConditions","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("ITS/Calib/SPDNoise","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("ITS/Calib/CalibSDD","alien://Folder=/alice/data/2010/OCDB");
//
// TRD from RAW OCDB
reco.SetSpecificStorage("TRD/Calib/ChamberStatus","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("TRD/Calib/PadStatus","alien://folder=/alice/data/2010/OCDB");
//
// TPC from RAW OCDB
reco.SetSpecificStorage("TPC/Calib/PadGainFactor","alien://folder=/alice/data/2010/OCDB");
//
// V0 from RAW OCDB
reco.SetSpecificStorage("VZERO/Trigger/Data","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("VZERO/Calib/RecoParam","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("VZERO/Calib/Data","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("VZERO/Calib/TimeSlewing","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("VZERO/Calib/TimeDelays","alien://folder=/alice/data/2010/OCDB");
//
// TOF from RAW OCDB
reco.SetSpecificStorage("TOF/Calib/Status","alien://folder=/alice/data/2010/OCDB");
//
// FMD from RAW OCDB
reco.SetSpecificStorage("FMD/Calib/Pedestal", "alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("FMD/Calib/PulseGain","alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("FMD/Calib/Dead", "alien://folder=/alice/data/2010/OCDB");
reco.SetSpecificStorage("FMD/Calib/AltroMap","alien://folder=/alice/data/2010/OCDB");
//
TStopwatch timer;
timer.Start();
reco.Run();
timer.Stop();
timer.Print();
}
void recCPass0(const char *filename="raw.root",Int_t nevents=-1, const char *ocdb="raw://", const char* options="?Trigger=kCalibBarrel")
{
if (gSystem->Getenv("ALIROOT_FORCE_COREDUMP"))
{
printf("ALIROOT_FORCE_COREDUMP set\n");
gSystem->ResetSignal(kSigFloatingException);
gSystem->ResetSignal(kSigSegmentationViolation);
}
// addopt errors to account for calibration imprefection before cpass0
// 1) For TPC
Double_t tpcSystematicErrors[5]={1,1.5,1./100.,1./100.,0.1};
Double_t tpcSystematicErrorClusters[2]={1.5,1.5};
Double_t tpcExtendedRoads[2]={2.5,2.5};
Double_t tpcPrimDCACuts[2] = {10.,30.}; // Y,Z
TVectorD *vectpcSystematicErrors=new TVectorD(5, tpcSystematicErrors);
TVectorD *vectpcSystematicErrorClusters=new TVectorD(2, tpcSystematicErrorClusters);
TVectorD *vectpcExtendedRoads= new TVectorD(2, tpcExtendedRoads);
TVectorD *vectpcPrimDCACuts = new TVectorD(2, tpcPrimDCACuts);
const double kZOutSectorCut = 3.; // cut on clusters on wrong side of CE (added to extendedRoadZ)
const double kPrimaryZ2XCut = 1.2; // cut on clusters Z/X (large eta)
AliTPCReconstructor::SetSystematicError(vectpcSystematicErrors);
AliTPCReconstructor::SetSystematicErrorCluster(vectpcSystematicErrorClusters);
AliTPCReconstructor::SetExtendedRoads(vectpcExtendedRoads);
AliTPCReconstructor::SetPrimaryDCACut(vectpcPrimDCACuts);
AliTPCReconstructor::SetZOutSectorCut(kZOutSectorCut);
AliTPCReconstructor::SetPrimaryZ2XCut(kPrimaryZ2XCut);
//
if (gSystem->Getenv("streamLevel")){
SetStreamLevel( AliTPCtracker::kStreamErrParam| AliTPCtracker::kStreamTransform);
}
// 2) For ITS
AliITSReconstructor::SetCheckInvariant(kFALSE); // no invariant check with extended TPC errors
// 3) For TOF
// extra tolerance on top of default from recoparam
AliTOFReconstructor::SetExtraTolerance(5.0);
// 4) For TRD
AliTRDReconstructor::SetExtraMaxClPerLayer(3); // to allow >6 cluster candidates per layer
AliTRDReconstructor::SetExtraBoundaryTolerance(3); // relax boundary check
AliTRDReconstructor::SetExtraRoadY(4); // extra road in Y
AliTRDReconstructor::SetExtraRoadZ(6); // extra road in Z
AliTRDReconstructor::SetExtraChi2Out(25); // extra chi2 tolerance on backpropagation
//
// Load some system libs for Grid and monitoring
// Set the CDB storage location
AliCDBManager * man = AliCDBManager::Instance();
man->SetDefaultStorage(ocdb);
// Reconstruction settings
AliReconstruction rec;
//
// do we extract the TPC recpoints in advance
Int_t preclustTPC = TString(gSystem->Getenv("preclusterizeTPC")).Atoi();
Bool_t noTPCLocalRec = preclustTPC==1;
if (noTPCLocalRec) printf("preclustTPC = %d: TPC local reconstruction assumed to be already done\n", preclustTPC);
else printf("preclustTPC = %d: TPC local reconstruction assumed to NOT be already done\n", preclustTPC);
//
if (gSystem->Getenv("disableOuter")!=NULL){
TString disOuter = gSystem->Getenv("disableOuter");
TString disOuterLoc = disOuter;
if (noTPCLocalRec) {
disOuterLoc.ReplaceAll("TPC","");
disOuterLoc.ReplaceAll("HLT","");
}
rec.SetRunReconstruction(disOuter.Data());
rec.SetRunLocalReconstruction(disOuterLoc.Data());
}
else if (noTPCLocalRec) {
rec.SetRunReconstruction("ALL -HLT");
rec.SetRunLocalReconstruction("ALL -TPC -HLT");
}
else {
rec.SetRunLocalReconstruction("ALL");
}
// Upload CDB entries from the snapshot (local root file) if snapshot exist
if (gSystem->AccessPathName("OCDB.root", kFileExists)==0) {
rec.SetDefaultStorage("local://");
rec.SetCDBSnapshotMode("OCDB.root");
}
else {
// setup ocdb by custom (if any) or default settings
if (gSystem->AccessPathName("localOCDBaccessConfig.C", kFileExists)==0) {
gROOT->LoadMacro("localOCDBaccessConfig.C");
localOCDBaccessConfig();
}else { // default settings
AliCDBManager* man = AliCDBManager::Instance();
man->SetRaw(kTRUE);
}
TString cdbMode = gSystem->Getenv("OCDB_SNAPSHOT_CREATE");
if (cdbMode == "kTRUE") {
gROOT->LoadMacro("$ALIDPG_ROOT/MC/CreateSnapshot.C");
CreateSnapshot("OCDB.root",filename);
return;
}
}
// All friends
rec.SetFractionFriends(2.0);
// AliReconstruction settings - hardwired MB trigger for calibration
TString newfilename = filename;
newfilename += options;
rec.SetInput(newfilename.Data());
// Set protection against too many events in a chunk (should not happen)
if (nevents>0) rec.SetEventRange(0,nevents);
// Remove recpoints after each event
TString delRecPoints="TPC TRD ITS";
if (noTPCLocalRec) delRecPoints.ReplaceAll("TPC","");
rec.SetDeleteRecPoints(delRecPoints.Data());
//
// Switch off the V0 finder - saves time!
// rec.SetRunMultFinder(kFALSE);
rec.SetRunV0Finder(kFALSE);
//
// QA options - all QA is off
//
rec.SetRunQA(":");
rec.SetRunGlobalQA(kFALSE);
// AliReconstruction settings
rec.SetWriteESDfriend(kTRUE);
rec.SetWriteAlignmentData();
rec.SetUseTrackingErrorsForAlignment("ITS");
rec.SetCleanESD(kFALSE);
// ITS options (see ALIROOT-7179)
float itsErrY2[6]={0., 0., 0.1*0.1, 0.1*.1, 0.,0.};
TVectorF *vecITSErrY2 = new TVectorF(6, itsErrY2);
AliITSReconstructor::SetExtraErrorY2(vecITSErrY2);
//Ignore SetStopOnError
rec.SetStopOnError(kFALSE);
AliLog::Flush();
rec.Run();
}
void rec(const char *filename="raw.root", const char* options="")
{
/////////////////////////////////////////////////////////////////////////////////////////
//
// Reconstruction script for RAW data
//
/////////////////////////////////////////////////////////////////////////////////////////
AliReconstruction rec;
// Set reconstruction flags (skip detectors here if neded with -<detector name>
// do we extract the TPC recpoints in advance
Int_t preclustTPC = TString(gSystem->Getenv("preclusterizeTPC")).Atoi();
Bool_t noTPCLocalRec = preclustTPC==1;
if (noTPCLocalRec) printf("preclustTPC = %d: TPC local reconstruction assumed to be already done\n", preclustTPC);
else printf("preclustTPC = %d: TPC local reconstruction assumed to NOT be already done\n", preclustTPC);
//
if (noTPCLocalRec) {
rec.SetRunReconstruction("ALL -HLT");
rec.SetRunLocalReconstruction("ALL -TPC -HLT");
}
else {
rec.SetRunLocalReconstruction("ALL");
}
// Upload CDB entries from the snapshot (local root file) if snapshot exist
if (gSystem->AccessPathName("OCDB.root", kFileExists)==0) {
rec.SetDefaultStorage("local://");
rec.SetCDBSnapshotMode("OCDB.root");
}
else {
// setup ocdb by custom (if any) or default settings
if (gSystem->AccessPathName("OCDBconfig.C", kFileExists)==0) {
gROOT->Macro("OCDBconfig.C");
}
else { // default settings
AliCDBManager* man = AliCDBManager::Instance();
man->SetRaw(kTRUE);
}
//
TString cdbMode = gSystem->Getenv("OCDB_SNAPSHOT_CREATE");
if (cdbMode == "kTRUE") {
gROOT->LoadMacro("$ALIDPG_ROOT/MC/CreateSnapshot.C");
CreateSnapshot("OCDB.root",filename);
return;
}
}
// removing apparently pile-up clusters to speadup reconstruction
const double kZOutSectorCut = 3.; // cut on clusters on wrong side of CE (added to extendedRoadZ)
AliTPCReconstructor::SetZOutSectorCut(kZOutSectorCut);
// QA options
// rec.SetRunQA("Global:ESDs") ;
// rec.SetRunQA(":") ;
// rec.SetRunQA("ALL:ALL") ;
rec.SetRunQA("Global MUON:ALL") ;
rec.SetQARefDefaultStorage("local://$ALICE_ROOT/QAref") ;
// AD stuff (see ALIROOT-6663)
// rec.SetOption("AD", "+SaturationCorrection"); // --> not needed anymore, see https://alice.its.cern.ch/jira/browse/ALIROOT-6778
// AliReconstruction settings
rec.SetWriteESDfriend(kTRUE);
rec.SetWriteAlignmentData();
TString filenamewithopt = filename;
filenamewithopt += options;
rec.SetInput(filenamewithopt.Data());
rec.SetUseTrackingErrorsForAlignment("ITS");
// Specific AD storage, see https://alice.its.cern.ch/jira/browse/ALIROOT-6056
// rec.SetSpecificStorage("AD/Calib/TimeSlewing", "alien://Folder=/alice/simulation/2008/v4-15-Release/Ideal");
// switch off cleanESD
rec.SetCleanESD(kFALSE);
//Ignore SetStopOnError
rec.SetStopOnError(kFALSE);
// Delete recpoints
// Remove recpoints after each event
TString delRecPoints="TPC TRD";
if (noTPCLocalRec) delRecPoints.ReplaceAll("TPC","");
rec.SetDeleteRecPoints(delRecPoints.Data());
//
// Set 0.7% as fraction of friends (Ruben, 2017-08-22)
rec.SetFractionFriends(0.007);
AliLog::Flush();
rec.Run();
}
void main_recCPass1_OuterDet(const char *filename="raw.root",Int_t nevents=-1, const char *ocdb="raw://", Bool_t useFullITS=kFALSE)
{
// Load some system libs for Grid and monitoring
// Set the CDB storage location
AliCDBManager * man = AliCDBManager::Instance();
man->SetDefaultStorage(ocdb);
// Reconstruction settings
AliReconstruction rec;
// Upload CDB entries from the snapshot (local root file) if snapshot exist
if (gSystem->AccessPathName("OCDB.root", kFileExists)==0) {
man->SetDefaultStorage("local://");
man->SetRaw(kFALSE);
man->SetSnapshotMode("OCDB.root");
}
if (gSystem->AccessPathName("localOCDBaccessConfig.C", kFileExists)==0) {
gInterpreter->ProcessLine("localOCDBaccessConfig();");
}
if(!useFullITS){
// only SPD-trackletting will be done
printf("Special ITS configuration: only SPD-trackletting will be done\n");
rec.SetRecoParam("ITS",GetSpecialITSRecoParam());
}
// All friends
rec.SetFractionFriends(1.0);
// AliReconstruction settings - hardwired MB trigger for calibration
TString newfilename = filename;
newfilename += "?Trigger=kCalibOuter";
rec.SetInput(newfilename.Data());
// Set protection against too many events in a chunk (should not happen)
if (nevents>0) rec.SetEventRange(0,nevents);
// Remove recpoints after each event
rec.SetDeleteRecPoints("ITS MUON EMCAL PHOS VZERO T0");
// Switch off the V0 finder - saves time!
rec.SetRunV0Finder(kFALSE);
//
// QA options - all QA is off
//
rec.SetRunQA(":");
rec.SetRunGlobalQA(kFALSE);
// AliReconstruction settings
rec.SetWriteESDfriend(kFALSE);
if(!useFullITS) rec.SetWriteAlignmentData(kFALSE);
else rec.SetWriteAlignmentData();
rec.SetUseTrackingErrorsForAlignment("ITS");
rec.SetRunReconstruction("ITS MUON EMCAL PHOS VZERO T0");
rec.SetFillESD("ITS MUON EMCAL PHOS VZERO T0");
rec.SetCleanESD(kFALSE);
// Specific reco params for ZDC (why isn't this automatic?)
// rec.SetRecoParam("ZDC",AliZDCRecoParamPbPb::GetHighFluxParam(2760));
//Ignore SetStopOnError
rec.SetStopOnError(kFALSE);
AliLog::Flush();
rec.Run();
}