void HMMObservations::dump(std::string filename) {
FILE* fp = fopen(filename.c_str(), "w");
assert(fp);
FileIO fio;
fio.writeUInt32(fp, nseq);
fio.writeUInt32Array(fp, slen, nseq);
fio.writeUInt32Array(fp, y, tot_len);
fclose(fp);
}
void HMM::save_parameters(std::string filename) {
FileIO fio;
FILE* fp = fopen(filename.c_str(), "w");
assert(fp);
fio.writeUInt32(fp, hs);
fio.writeUInt32(fp, os);
fio.writeDoubleArray(fp, nu, hs);
fio.writeDoubleArray(fp, Q, hs*hs);
fio.writeDoubleArray(fp, g, hs*os);
fclose(fp);
}
